Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006936.t1 | XP_013456816.1 | 97.9 | 657 | 11 | 2 | 1 | 657 | 1 | 654 | 0.00E+00 | 1174.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006936.t1 | Q9SXS2 | 75.7 | 622 | 150 | 1 | 17 | 637 | 1 | 622 | 9.1e-265 | 914.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006936.t1 | A0A072UMG1 | 97.9 | 657 | 11 | 2 | 1 | 657 | 1 | 654 | 0.0e+00 | 1174.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene006936 | MS.gene020274 | PPI |
| MS.gene006936 | MS.gene79239 | PPI |
| MS.gene006936 | MS.gene061401 | PPI |
| MS.gene006936 | MS.gene036194 | PPI |
| MS.gene006936 | MS.gene052232 | PPI |
| MS.gene006936 | MS.gene018135 | PPI |
| MS.gene006936 | MS.gene33360 | PPI |
| MS.gene006936 | MS.gene75452 | PPI |
| MS.gene006936 | MS.gene045087 | PPI |
| MS.gene006936 | MS.gene98424 | PPI |
| MS.gene006936 | MS.gene39949 | PPI |
| MS.gene006936 | MS.gene49382 | PPI |
| MS.gene006936 | MS.gene33361 | PPI |
| MS.gene006936 | MS.gene43394 | PPI |
| MS.gene006936 | MS.gene89102 | PPI |
| MS.gene006936 | MS.gene054883 | PPI |
| MS.gene006936 | MS.gene36287 | PPI |
| MS.gene006936 | MS.gene33359 | PPI |
| MS.gene006936 | MS.gene92478 | PPI |
| MS.gene006936 | MS.gene50542 | PPI |
| MS.gene006936 | MS.gene033981 | PPI |
| MS.gene006936 | MS.gene61200 | PPI |
| MS.gene006936 | MS.gene43089 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006936.t1 | MTR_4g084620 | 97.869 | 657 | 11 | 2 | 1 | 657 | 1 | 654 | 0.0 | 1301 |
| MS.gene006936.t1 | MTR_4g084640 | 75.809 | 649 | 153 | 3 | 1 | 647 | 1 | 647 | 0.0 | 998 |
| MS.gene006936.t1 | MTR_2g102243 | 64.286 | 630 | 221 | 3 | 16 | 643 | 19 | 646 | 0.0 | 830 |
| MS.gene006936.t1 | MTR_4g011970 | 63.376 | 628 | 228 | 2 | 17 | 643 | 27 | 653 | 0.0 | 824 |
| MS.gene006936.t1 | MTR_2g102243 | 65.658 | 562 | 190 | 2 | 16 | 575 | 19 | 579 | 0.0 | 765 |
| MS.gene006936.t1 | MTR_1g071530 | 57.704 | 636 | 265 | 3 | 15 | 648 | 16 | 649 | 0.0 | 738 |
| MS.gene006936.t1 | MTR_7g095430 | 56.358 | 637 | 267 | 4 | 19 | 648 | 17 | 649 | 0.0 | 723 |
| MS.gene006936.t1 | MTR_5g061880 | 53.397 | 633 | 292 | 3 | 10 | 640 | 20 | 651 | 0.0 | 706 |
| MS.gene006936.t1 | MTR_3g073780 | 51.506 | 631 | 302 | 3 | 10 | 637 | 23 | 652 | 0.0 | 671 |
| MS.gene006936.t1 | MTR_7g095430 | 58.303 | 554 | 230 | 1 | 19 | 571 | 17 | 570 | 0.0 | 669 |
| MS.gene006936.t1 | MTR_2g008470 | 52.215 | 632 | 298 | 4 | 7 | 636 | 22 | 651 | 0.0 | 665 |
| MS.gene006936.t1 | MTR_2g008470 | 52.215 | 632 | 298 | 4 | 7 | 636 | 41 | 670 | 0.0 | 664 |
| MS.gene006936.t1 | MTR_3g073780 | 51.596 | 564 | 270 | 2 | 10 | 570 | 23 | 586 | 0.0 | 612 |
| MS.gene006936.t1 | MTR_6g086170 | 46.625 | 637 | 329 | 5 | 18 | 649 | 6 | 636 | 0.0 | 608 |
| MS.gene006936.t1 | MTR_3g073780 | 52.142 | 537 | 254 | 2 | 10 | 543 | 23 | 559 | 0.0 | 586 |
| MS.gene006936.t1 | MTR_5g061860 | 45.642 | 631 | 326 | 7 | 24 | 642 | 28 | 653 | 0.0 | 546 |
| MS.gene006936.t1 | MTR_3g087740 | 46.609 | 575 | 301 | 4 | 68 | 638 | 79 | 651 | 0.0 | 540 |
| MS.gene006936.t1 | MTR_3g073730 | 45.652 | 598 | 311 | 5 | 52 | 638 | 60 | 654 | 1.29e-178 | 523 |
| MS.gene006936.t1 | MTR_5g061860 | 46.704 | 531 | 268 | 5 | 24 | 543 | 28 | 554 | 3.23e-165 | 485 |
| MS.gene006936.t1 | MTR_3g087730 | 39.110 | 652 | 373 | 10 | 7 | 642 | 16 | 659 | 1.44e-153 | 459 |
| MS.gene006936.t1 | MTR_7g022870 | 35.560 | 554 | 342 | 9 | 65 | 613 | 71 | 614 | 4.10e-115 | 361 |
| MS.gene006936.t1 | MTR_7g022870 | 33.966 | 580 | 360 | 12 | 1 | 570 | 5 | 571 | 6.95e-107 | 335 |
| MS.gene006936.t1 | MTR_6g024420 | 31.061 | 132 | 65 | 5 | 222 | 353 | 61 | 166 | 2.72e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006936.t1 | AT1G23090 | 78.457 | 622 | 133 | 1 | 17 | 637 | 1 | 622 | 0.0 | 1004 |
| MS.gene006936.t1 | AT3G15990 | 66.930 | 632 | 199 | 4 | 17 | 643 | 24 | 650 | 0.0 | 848 |
| MS.gene006936.t1 | AT1G23090 | 78.367 | 490 | 105 | 1 | 149 | 637 | 1 | 490 | 0.0 | 783 |
| MS.gene006936.t1 | AT1G23090 | 78.367 | 490 | 105 | 1 | 149 | 637 | 1 | 490 | 0.0 | 783 |
| MS.gene006936.t1 | AT1G23090 | 78.367 | 490 | 105 | 1 | 149 | 637 | 1 | 490 | 0.0 | 783 |
| MS.gene006936.t1 | AT3G51895 | 56.583 | 638 | 272 | 3 | 20 | 655 | 20 | 654 | 0.0 | 740 |
| MS.gene006936.t1 | AT3G51895 | 55.846 | 650 | 275 | 4 | 8 | 655 | 60 | 699 | 0.0 | 740 |
| MS.gene006936.t1 | AT4G08620 | 51.987 | 629 | 297 | 4 | 20 | 645 | 23 | 649 | 0.0 | 655 |
| MS.gene006936.t1 | AT4G02700 | 53.526 | 624 | 279 | 5 | 18 | 635 | 8 | 626 | 0.0 | 647 |
| MS.gene006936.t1 | AT1G22150 | 51.510 | 629 | 298 | 4 | 19 | 643 | 30 | 655 | 0.0 | 645 |
| MS.gene006936.t1 | AT1G22150 | 51.510 | 629 | 298 | 4 | 19 | 643 | 30 | 655 | 0.0 | 645 |
| MS.gene006936.t1 | AT1G22150 | 51.510 | 629 | 298 | 4 | 19 | 643 | 30 | 655 | 0.0 | 645 |
| MS.gene006936.t1 | AT1G78000 | 51.196 | 627 | 301 | 4 | 20 | 643 | 28 | 652 | 0.0 | 634 |
| MS.gene006936.t1 | AT1G78000 | 51.196 | 627 | 301 | 4 | 20 | 643 | 28 | 652 | 0.0 | 634 |
| MS.gene006936.t1 | AT1G78000 | 51.196 | 627 | 301 | 4 | 20 | 643 | 28 | 652 | 0.0 | 634 |
| MS.gene006936.t1 | AT1G78000 | 52.668 | 581 | 271 | 3 | 20 | 597 | 28 | 607 | 0.0 | 612 |
| MS.gene006936.t1 | AT1G22150 | 52.878 | 556 | 256 | 3 | 19 | 570 | 30 | 583 | 0.0 | 598 |
| MS.gene006936.t1 | AT1G78000 | 53.430 | 554 | 254 | 3 | 20 | 570 | 28 | 580 | 0.0 | 589 |
| MS.gene006936.t1 | AT5G19600 | 47.107 | 605 | 308 | 5 | 33 | 635 | 28 | 622 | 0.0 | 585 |
| MS.gene006936.t1 | AT5G10180 | 47.164 | 617 | 314 | 7 | 25 | 633 | 57 | 669 | 0.0 | 547 |
| MS.gene006936.t1 | AT1G77990 | 46.791 | 592 | 301 | 6 | 65 | 648 | 90 | 675 | 0.0 | 546 |
| MS.gene006936.t1 | AT1G78000 | 54.741 | 464 | 209 | 1 | 20 | 482 | 28 | 491 | 3.70e-171 | 498 |
| MS.gene006936.t1 | AT1G78000 | 52.242 | 446 | 209 | 3 | 128 | 570 | 1 | 445 | 3.35e-155 | 456 |
| MS.gene006936.t1 | AT3G12520 | 36.738 | 558 | 324 | 10 | 68 | 613 | 51 | 591 | 3.20e-121 | 375 |
| MS.gene006936.t1 | AT3G12520 | 36.738 | 558 | 324 | 10 | 68 | 613 | 67 | 607 | 4.52e-121 | 375 |
| MS.gene006936.t1 | AT5G13550 | 34.146 | 615 | 381 | 11 | 45 | 651 | 57 | 655 | 1.26e-115 | 362 |
| MS.gene006936.t1 | AT3G12520 | 37.006 | 481 | 286 | 7 | 68 | 543 | 67 | 535 | 5.69e-108 | 337 |
Find 122 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAAATCTGACCTTGTTTC+TGG | 0.130134 | 4.3:-27414821 | MS.gene006936:CDS |
| CCACTTATTTATGCTGTTCT+TGG | 0.200280 | 4.3:-27414515 | MS.gene006936:CDS |
| TTATCCAAAGCAATCTTAAT+TGG | 0.209529 | 4.3:-27414203 | MS.gene006936:CDS |
| TGAGGAAACCAAAGCTATTC+TGG | 0.221724 | 4.3:-27410675 | MS.gene006936:CDS |
| CTGCAACAGCAAGGCCTAAC+TGG | 0.284427 | 4.3:+27409559 | None:intergenic |
| TGGAATATGTTGAAATTTCA+TGG | 0.294784 | 4.3:-27410395 | MS.gene006936:CDS |
| CAACAACTTAAGAGCTTACT+TGG | 0.304881 | 4.3:-27414146 | MS.gene006936:CDS |
| AGCAATCTTAATTGGATTCA+TGG | 0.313090 | 4.3:-27414195 | MS.gene006936:CDS |
| CAAGGTCAGATTTAAAGATT+TGG | 0.314407 | 4.3:+27414828 | None:intergenic |
| AAGCTTCACTAGGAATTCTA+AGG | 0.315034 | 4.3:-27414346 | MS.gene006936:intron |
| GTGATGTTAACCGCTTTCTT+TGG | 0.327317 | 4.3:-27409600 | MS.gene006936:CDS |
| GGAACAATGGCATAAGAAAA+AGG | 0.348636 | 4.3:+27409733 | None:intergenic |
| TCCCTGCTGCCTGCCACATT+TGG | 0.349015 | 4.3:-27409647 | MS.gene006936:CDS |
| TTAGAACCCCATTGAAGAAT+AGG | 0.358996 | 4.3:+27414860 | None:intergenic |
| CTTCTTCCGTCTTGGTTGAC+TGG | 0.362920 | 4.3:+27408445 | None:intergenic |
| AAGGAATAAATCCTTCTTCA+TGG | 0.363775 | 4.3:-27410415 | MS.gene006936:CDS |
| GCAAATCTTCCTCCAATTGT+TGG | 0.366664 | 4.3:-27414640 | MS.gene006936:CDS |
| AGGAAGGACATTTGCAGCTC+TGG | 0.374925 | 4.3:-27410149 | MS.gene006936:CDS |
| AATAAAGAAATGATGGCAAT+TGG | 0.378840 | 4.3:-27410106 | MS.gene006936:CDS |
| TAGAACCCCATTGAAGAATA+GGG | 0.379412 | 4.3:+27414861 | None:intergenic |
| ACATTCACATTGTGTAGAAA+TGG | 0.380066 | 4.3:-27415035 | MS.gene006936:CDS |
| GAATCCAATTAAGATTGCTT+TGG | 0.382130 | 4.3:+27414199 | None:intergenic |
| ACACATTACCTGACATTTCC+AGG | 0.383701 | 4.3:+27409056 | None:intergenic |
| ATAGAAATCTTCATCAATAC+AGG | 0.385942 | 4.3:-27409333 | MS.gene006936:CDS |
| TGGAGGAAGATTTGCAAGCT+TGG | 0.399551 | 4.3:+27414648 | None:intergenic |
| CTTGGTCTAGTCGTGAAAAC+TGG | 0.401338 | 4.3:-27410365 | MS.gene006936:CDS |
| TTCCAAATGTGGCAGGCAGC+AGG | 0.402147 | 4.3:+27409645 | None:intergenic |
| AGTGATGGGAATTTGCTTCT+TGG | 0.405363 | 4.3:-27413728 | MS.gene006936:CDS |
| ATTGCGCCCAATACAACATT+AGG | 0.408565 | 4.3:+27409702 | None:intergenic |
| GAAATCAAGGCTCAAAATCA+TGG | 0.408873 | 4.3:-27410598 | MS.gene006936:CDS |
| TACACACCTAATGTTGTATT+GGG | 0.409395 | 4.3:-27409708 | MS.gene006936:CDS |
| ATACACACCTAATGTTGTAT+TGG | 0.411358 | 4.3:-27409709 | MS.gene006936:CDS |
| GAGGTGTTTGTCCTTTGAAT+TGG | 0.415965 | 4.3:+27414918 | None:intergenic |
| CTTGACAGTTGGAGAGGCTG+TGG | 0.416310 | 4.3:-27408493 | MS.gene006936:CDS |
| GCAGAGACCCAGAATAGCTT+TGG | 0.416415 | 4.3:+27410667 | None:intergenic |
| TTCAACATATTCCATGAAGA+AGG | 0.416613 | 4.3:+27410404 | None:intergenic |
| TAAAAGCAACAATGGAAAAG+AGG | 0.421997 | 4.3:-27408716 | MS.gene006936:CDS |
| AATTGGCGTAGAGGATCATC+AGG | 0.432967 | 4.3:+27414935 | None:intergenic |
| AAGCTATTCTGGGTCTCTGC+TGG | 0.437220 | 4.3:-27410664 | MS.gene006936:CDS |
| ATAAAGAAATGATGGCAATT+GGG | 0.445514 | 4.3:-27410105 | MS.gene006936:CDS |
| GCTAGTTGAAGAAACAGAAC+AGG | 0.445796 | 4.3:+27414401 | None:intergenic |
| AGAAGAGGAAGATAACATAA+AGG | 0.445883 | 4.3:-27409104 | MS.gene006936:CDS |
| CACTTACATAGTCCAACAAT+TGG | 0.446401 | 4.3:+27414628 | None:intergenic |
| ACAAGTGAAGCAATAGAAAC+AGG | 0.450000 | 4.3:+27414467 | None:intergenic |
| GTGATGTTTGCAAAATTGAT+AGG | 0.450588 | 4.3:+27409265 | None:intergenic |
| ACTTCCTGCTATGTAACAAC+AGG | 0.458112 | 4.3:-27410058 | MS.gene006936:intron |
| GAGGAAACCAAAGCTATTCT+GGG | 0.459759 | 4.3:-27410674 | MS.gene006936:CDS |
| TGAGATTCCACTTGTGTCAA+TGG | 0.462450 | 4.3:+27408752 | None:intergenic |
| AAGGCCTAAAACAGTAATGA+TGG | 0.462741 | 4.3:-27409380 | MS.gene006936:CDS |
| ATCATAGTCACAGCAGTGAT+TGG | 0.463581 | 4.3:-27409681 | MS.gene006936:CDS |
| ATACAACATTAGGTGTGTAT+TGG | 0.467671 | 4.3:+27409712 | None:intergenic |
| ATCTTAATTGGATTCATGGC+TGG | 0.470414 | 4.3:-27414191 | MS.gene006936:CDS |
| TGTATGTGCTTCTTCCGTCT+TGG | 0.473979 | 4.3:+27408437 | None:intergenic |
| GTCTATCTTCCAAATGTGGC+AGG | 0.478726 | 4.3:+27409638 | None:intergenic |
| GAGATTATGACACACATAAG+AGG | 0.480206 | 4.3:+27410637 | None:intergenic |
| CCTCTCCAACTGTCAAGAAA+AGG | 0.505332 | 4.3:+27408499 | None:intergenic |
| GGATACTCCTGCAAATTACA+AGG | 0.513068 | 4.3:-27409399 | MS.gene006936:CDS |
| GAATGCATGGAGAAAGTATT+GGG | 0.514026 | 4.3:+27415058 | None:intergenic |
| GGATGGAAATAAAGAAATGA+TGG | 0.515894 | 4.3:-27410113 | MS.gene006936:CDS |
| AAAAGCAACAATGGAAAAGA+GGG | 0.517204 | 4.3:-27408715 | MS.gene006936:CDS |
| CAAGGAGTTAAAAGCAACAA+TGG | 0.517597 | 4.3:-27408724 | MS.gene006936:CDS |
| GACAAACCTGTGGGATGGCT+AGG | 0.520216 | 4.3:+27414783 | None:intergenic |
| ATGCTCAAAATAAGAAAGCC+TGG | 0.523631 | 4.3:+27409295 | None:intergenic |
| TAGATTGGAAAATTGCATGA+AGG | 0.530054 | 4.3:-27410434 | MS.gene006936:CDS |
| AAATTTCATGGAAGTCACCT+TGG | 0.533094 | 4.3:-27410383 | MS.gene006936:CDS |
| AGGCCTAAAACAGTAATGAT+GGG | 0.534416 | 4.3:-27409379 | MS.gene006936:CDS |
| GGAAGGACATTTGCAGCTCT+GGG | 0.536167 | 4.3:-27410148 | MS.gene006936:CDS |
| TGTGAGGTGGTGGAACAACT+TGG | 0.540385 | 4.3:+27415005 | None:intergenic |
| GGTCTATTTCAAGCTTCACT+AGG | 0.546560 | 4.3:-27414356 | MS.gene006936:CDS |
| GTGAAAACTGGCATTATCAC+TGG | 0.547543 | 4.3:-27410353 | MS.gene006936:CDS |
| TGCTGTTCTTGGAAGCTCAA+GGG | 0.550006 | 4.3:-27414504 | MS.gene006936:CDS |
| AGAACCTGTTGTTACATAGC+AGG | 0.550167 | 4.3:+27410054 | None:intergenic |
| GTCGTGGCAAACAATAGTGA+TGG | 0.551750 | 4.3:-27413743 | MS.gene006936:CDS |
| TTTCTATATATGTCTGTCCC+TGG | 0.552220 | 4.3:+27409349 | None:intergenic |
| CTGGGAAACTACAAAGTGGA+TGG | 0.553696 | 4.3:-27410130 | MS.gene006936:CDS |
| CCAAGAACAGCATAAATAAG+TGG | 0.556426 | 4.3:+27414515 | None:intergenic |
| TCAGCTGTTAATAACAATGC+AGG | 0.561538 | 4.3:-27409810 | MS.gene006936:CDS |
| AACAGAACAGGTTCTGCTGA+AGG | 0.564338 | 4.3:+27414413 | None:intergenic |
| ACATCACATATCTCAATGAC+AGG | 0.566479 | 4.3:-27409249 | MS.gene006936:intron |
| TCCAAATGTGGCAGGCAGCA+GGG | 0.567232 | 4.3:+27409646 | None:intergenic |
| AAACAGGAAGGTATTGCAGT+AGG | 0.569633 | 4.3:-27410169 | MS.gene006936:intron |
| ATGCTGTTCTTGGAAGCTCA+AGG | 0.570962 | 4.3:-27414505 | MS.gene006936:CDS |
| GATCCTCTACGCCAATTCAA+AGG | 0.572296 | 4.3:-27414929 | MS.gene006936:CDS |
| ATTTGTCTATCTTCCAAATG+TGG | 0.574245 | 4.3:+27409634 | None:intergenic |
| TGAATGCATGGAGAAAGTAT+TGG | 0.578645 | 4.3:+27415057 | None:intergenic |
| ATTGGGTGTATGAATGTGGT+TGG | 0.586439 | 4.3:-27410088 | MS.gene006936:CDS |
| TTACATAGTCCAACAATTGG+AGG | 0.587072 | 4.3:+27414631 | None:intergenic |
| GTAATGATGGGGAATATACC+AGG | 0.587250 | 4.3:-27409367 | MS.gene006936:CDS |
| TGTATTCTGACAGCTTGTGT+TGG | 0.588408 | 4.3:-27408595 | MS.gene006936:intron |
| GTGAGCGCCATTGACACAAG+TGG | 0.593369 | 4.3:-27408759 | MS.gene006936:CDS |
| ATAAATGCATGCAGAGCATG+AGG | 0.596892 | 4.3:-27410693 | MS.gene006936:intron |
| AATGGAAAAGAGGGGTGTTG+AGG | 0.597093 | 4.3:-27408706 | MS.gene006936:intron |
| CTTGATATTAATCAGTAATG+TGG | 0.600180 | 4.3:+27408408 | None:intergenic |
| TGCTAGCCTAGCCATCCCAC+AGG | 0.604922 | 4.3:-27414789 | MS.gene006936:intron |
| GGCAATTGGGTGTATGAATG+TGG | 0.608184 | 4.3:-27410092 | MS.gene006936:CDS |
| CAATAGTAAGACCAGAAACA+AGG | 0.611816 | 4.3:+27414810 | None:intergenic |
| TCGTGGCAAACAATAGTGAT+GGG | 0.611848 | 4.3:-27413742 | MS.gene006936:CDS |
| TGTTACATAGCAGGAAGTGA+AGG | 0.613521 | 4.3:+27410063 | None:intergenic |
| ACAATGTGAATGTGAATGCA+TGG | 0.614228 | 4.3:+27415045 | None:intergenic |
| TTAGGTGTGTATTGGAACAA+TGG | 0.616093 | 4.3:+27409720 | None:intergenic |
| AGGAAGGTATTGCAGTAGGA+AGG | 0.616887 | 4.3:-27410165 | MS.gene006936:CDS |
| ACGATGGATTGAAGAAGAAG+AGG | 0.617925 | 4.3:-27409119 | MS.gene006936:CDS |
| TGTCCTTTGAATTGGCGTAG+AGG | 0.623132 | 4.3:+27414926 | None:intergenic |
| AGGGAAGCTACAAGAATACC+AGG | 0.627065 | 4.3:-27409313 | MS.gene006936:CDS |
| GGCCTAAAACAGTAATGATG+GGG | 0.628045 | 4.3:-27409378 | MS.gene006936:CDS |
| GAGTGTCACCATCACTGTCA+CGG | 0.630556 | 4.3:+27409755 | None:intergenic |
| TATTGTGAAACTTACAGTGA+GGG | 0.630959 | 4.3:+27410322 | None:intergenic |
| AATTTGACAAACCTGTGGGA+TGG | 0.632176 | 4.3:+27414778 | None:intergenic |
| ATCATATTAGGACGCTACGA+TGG | 0.635788 | 4.3:-27409135 | MS.gene006936:intron |
| GAAGAGCCAGTCAACCAAGA+CGG | 0.642630 | 4.3:-27408451 | MS.gene006936:CDS |
| AGAAAGCGGTTAACATCACA+AGG | 0.644103 | 4.3:+27409604 | None:intergenic |
| ATGAACTCACTGCAACAGCA+AGG | 0.645871 | 4.3:+27409550 | None:intergenic |
| TAGAAATCTTCATCAATACA+GGG | 0.647002 | 4.3:-27409332 | MS.gene006936:CDS |
| AGTAATGTCCGTGACAGTGA+TGG | 0.653422 | 4.3:-27409763 | MS.gene006936:CDS |
| AGCTCAAGGGATCTAGCAGT+AGG | 0.655950 | 4.3:-27414491 | MS.gene006936:CDS |
| AGAACAGCATAAATAAGTGG+AGG | 0.660588 | 4.3:+27414518 | None:intergenic |
| GTTGGTGAATCCTCTTGCCG+AGG | 0.678987 | 4.3:-27408577 | MS.gene006936:CDS |
| AGGCAGCAGGGATATCAATG+AGG | 0.680296 | 4.3:+27409658 | None:intergenic |
| AAAGCAACAATGGAAAAGAG+GGG | 0.696537 | 4.3:-27408714 | MS.gene006936:CDS |
| TAATGATGGGGAATATACCA+GGG | 0.716136 | 4.3:-27409366 | MS.gene006936:CDS |
| AGCTCTGGGAAACTACAAAG+TGG | 0.725432 | 4.3:-27410134 | MS.gene006936:CDS |
| ATTGGCGTAGAGGATCATCA+GGG | 0.743420 | 4.3:+27414936 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATATAATTATTAAA+TGG | - | chr4.3:27411300-27411319 | MS.gene006936:intron | 0.0% |
| !!! | TTTTTTTTTTATTTTTAAAA+AGG | - | chr4.3:27411170-27411189 | MS.gene006936:intron | 0.0% |
| !! | AAAAAAATGATTATATTAAG+AGG | - | chr4.3:27411217-27411236 | MS.gene006936:intron | 10.0% |
| !! | AAAAATAATGAATAAAATGA+AGG | + | chr4.3:27410867-27410886 | None:intergenic | 10.0% |
| !! | AATTATGTAAATTGTTTATT+AGG | - | chr4.3:27408800-27408819 | MS.gene006936:intron | 10.0% |
| !! | ATCAAAGAATAATATTATAT+AGG | + | chr4.3:27411477-27411496 | None:intergenic | 10.0% |
| !! | ATTATGTAAATTGTTTATTA+GGG | - | chr4.3:27408801-27408820 | MS.gene006936:intron | 10.0% |
| !! | GTTTATTAAAAAAAAAAAAC+AGG | - | chr4.3:27413298-27413317 | MS.gene006936:intron | 10.0% |
| !! | TCAAAGAATAATATTATATA+GGG | + | chr4.3:27411476-27411495 | None:intergenic | 10.0% |
| !!! | AATATTTTCTCATAATAAAA+AGG | + | chr4.3:27412180-27412199 | None:intergenic | 10.0% |
| !!! | ATATAATATGCATTTTTTTA+TGG | - | chr4.3:27411326-27411345 | MS.gene006936:intron | 10.0% |
| !!! | ATTAAGAAAAAAATAGATTT+TGG | - | chr4.3:27411753-27411772 | MS.gene006936:intron | 10.0% |
| !!! | ATTCATTATTTTTTTTACAT+TGG | - | chr4.3:27410874-27410893 | MS.gene006936:intron | 10.0% |
| !!! | TAACTTTTTTTACTTAATAA+GGG | + | chr4.3:27412386-27412405 | None:intergenic | 10.0% |
| !!! | TATAATATGCATTTTTTTAT+GGG | - | chr4.3:27411327-27411346 | MS.gene006936:intron | 10.0% |
| !!! | TTAACTTTTTTTACTTAATA+AGG | + | chr4.3:27412387-27412406 | None:intergenic | 10.0% |
| !!! | TTTAAAAAAAGTTATGATTT+TGG | - | chr4.3:27411449-27411468 | MS.gene006936:intron | 10.0% |
| !! | AATATAATAAAAATTCGTCT+TGG | + | chr4.3:27411077-27411096 | None:intergenic | 15.0% |
| !! | AATATATAAAATGGTGATAA+AGG | - | chr4.3:27409951-27409970 | MS.gene006936:intron | 15.0% |
| !! | AGAAATAATAATTAATCTCA+TGG | + | chr4.3:27413011-27413030 | None:intergenic | 15.0% |
| !! | ATTAAAAAAAAAAAACAGGA+AGG | - | chr4.3:27413302-27413321 | MS.gene006936:intron | 15.0% |
| !! | ATTAGTACTAATTAATTAAG+AGG | + | chr4.3:27408736-27408755 | None:intergenic | 15.0% |
| !! | GAATGTACATTTATTATTAT+GGG | - | chr4.3:27411349-27411368 | MS.gene006936:intron | 15.0% |
| !! | TCCATTGAAAAAATATTATA+TGG | + | chr4.3:27411252-27411271 | None:intergenic | 15.0% |
| !! | TTATAAGTAAATGTTATGAT+AGG | - | chr4.3:27410318-27410337 | MS.gene006936:intron | 15.0% |
| !!! | AAATGATTTTTTTAGCAAAA+TGG | - | chr4.3:27411813-27411832 | MS.gene006936:intron | 15.0% |
| !!! | AACAATTTTTTTTAGTTTAG+AGG | - | chr4.3:27410606-27410625 | MS.gene006936:CDS | 15.0% |
| !!! | ACAATTTTTTTTAGTTTAGA+GGG | - | chr4.3:27410607-27410626 | MS.gene006936:CDS | 15.0% |
| !!! | ACCATATAATATTTTTTCAA+TGG | - | chr4.3:27411248-27411267 | MS.gene006936:intron | 15.0% |
| !!! | ATGTTTTTGAAAGTTTTTAT+TGG | - | chr4.3:27411276-27411295 | MS.gene006936:intron | 15.0% |
| !!! | ATTTGAAGTTTTTTTTTTGA+AGG | - | chr4.3:27411094-27411113 | MS.gene006936:intron | 15.0% |
| !!! | TTTATCACCATTTTATATAT+TGG | + | chr4.3:27409952-27409971 | None:intergenic | 15.0% |
| !! | AAAAAAAATCCAAAACAAAC+AGG | - | chr4.3:27411911-27411930 | MS.gene006936:intron | 20.0% |
| !! | AAAATATATCAGATACCTAT+TGG | + | chr4.3:27412638-27412657 | None:intergenic | 20.0% |
| !! | AAATATATCAGATACCTATT+GGG | + | chr4.3:27412637-27412656 | None:intergenic | 20.0% |
| !! | CATTATCAAAACACAAAAAA+AGG | + | chr4.3:27412078-27412097 | None:intergenic | 20.0% |
| !! | CTAAGATTTCAAAAAGAAAA+TGG | + | chr4.3:27412287-27412306 | None:intergenic | 20.0% |
| !! | CTTTAATCAATAAGACTATT+AGG | + | chr4.3:27412255-27412274 | None:intergenic | 20.0% |
| !! | GGAATGTACATTTATTATTA+TGG | - | chr4.3:27411348-27411367 | MS.gene006936:intron | 20.0% |
| !! | TCATTTAAACTATGAATTTC+AGG | - | chr4.3:27413637-27413656 | MS.gene006936:intron | 20.0% |
| !! | TGAAATTCATAGTTTAAATG+AGG | + | chr4.3:27413638-27413657 | None:intergenic | 20.0% |
| !! | TGAATAAGTTAAGTTCAAAA+GGG | + | chr4.3:27408781-27408800 | None:intergenic | 20.0% |
| !! | TTGAATAAGTTAAGTTCAAA+AGG | + | chr4.3:27408782-27408801 | None:intergenic | 20.0% |
| !!! | AATTTTAAGATGCAAATCTT+TGG | + | chr4.3:27412536-27412555 | None:intergenic | 20.0% |
| !!! | ATACCTTTTTTAGAACATAT+GGG | + | chr4.3:27409201-27409220 | None:intergenic | 20.0% |
| !!! | CATACAATCGTTTTTTTTTA+AGG | - | chr4.3:27411982-27412001 | MS.gene006936:intron | 20.0% |
| !!! | CATTTTCTTTTTGAAATCTT+AGG | - | chr4.3:27412285-27412304 | MS.gene006936:intron | 20.0% |
| !!! | CCTAACTTTAAATTTTTGTA+AGG | + | chr4.3:27408510-27408529 | None:intergenic | 20.0% |
| !!! | CCTTACAAAAATTTAAAGTT+AGG | - | chr4.3:27408507-27408526 | MS.gene006936:CDS | 20.0% |
| !!! | CTAATAGTCTTATTGATTAA+AGG | - | chr4.3:27412253-27412272 | MS.gene006936:intron | 20.0% |
| !!! | CTTTTTTTGTGTTTTGATAA+TGG | - | chr4.3:27412076-27412095 | MS.gene006936:intron | 20.0% |
| !!! | GAACTTATGAATTTTAAGTT+TGG | + | chr4.3:27412583-27412602 | None:intergenic | 20.0% |
| !!! | GATTTAAGACATATCTATTA+AGG | + | chr4.3:27414848-27414867 | None:intergenic | 20.0% |
| !!! | GTAGGTAAAAAAAATCATTT+TGG | - | chr4.3:27411577-27411596 | MS.gene006936:intron | 20.0% |
| !!! | TAGTATTGACATATCATATT+AGG | - | chr4.3:27414336-27414355 | MS.gene006936:intron | 20.0% |
| !!! | TATACCTTTTTTAGAACATA+TGG | + | chr4.3:27409202-27409221 | None:intergenic | 20.0% |
| !!! | TATTTGTGTTTTTTTTTCTG+TGG | + | chr4.3:27409592-27409611 | None:intergenic | 20.0% |
| !!! | TCTATTTTTTTCTTAATGCA+AGG | + | chr4.3:27411750-27411769 | None:intergenic | 20.0% |
| !!! | TGAAATAGATTTTCATTTTG+AGG | - | chr4.3:27411786-27411805 | MS.gene006936:intron | 20.0% |
| !!! | TGTGATTCTTTTTTCTTTTT+TGG | + | chr4.3:27412032-27412051 | None:intergenic | 20.0% |
| !!! | TGTTATTTATTAATGATTGC+AGG | - | chr4.3:27409236-27409255 | MS.gene006936:intron | 20.0% |
| !!! | TTACATTGGTCAAATTTTTA+AGG | - | chr4.3:27410888-27410907 | MS.gene006936:intron | 20.0% |
| ! | AAAAGAATCACATGCATTAT+TGG | - | chr4.3:27412040-27412059 | MS.gene006936:intron | 25.0% |
| ! | AAAATAGAGAAAGAAACACT+TGG | + | chr4.3:27410114-27410133 | None:intergenic | 25.0% |
| ! | AAATAGAGAAAGAAACACTT+GGG | + | chr4.3:27410113-27410132 | None:intergenic | 25.0% |
| ! | AATAAAGAAATGATGGCAAT+TGG | - | chr4.3:27413377-27413396 | MS.gene006936:intron | 25.0% |
| ! | ATAAAGAAATGATGGCAATT+GGG | - | chr4.3:27413378-27413397 | MS.gene006936:intron | 25.0% |
| ! | ATAGAAATCTTCATCAATAC+AGG | - | chr4.3:27414150-27414169 | MS.gene006936:CDS | 25.0% |
| ! | CAAACAAATATGATGTAAGA+GGG | + | chr4.3:27414692-27414711 | None:intergenic | 25.0% |
| ! | CAACTTTATGTCTAAGAAAT+TGG | + | chr4.3:27412494-27412513 | None:intergenic | 25.0% |
| ! | GAAAAGGCCAATATATAAAA+TGG | - | chr4.3:27409942-27409961 | MS.gene006936:intron | 25.0% |
| ! | GTTTGTCACATAAATTCAAA+AGG | - | chr4.3:27413453-27413472 | MS.gene006936:intron | 25.0% |
| ! | TACGTAATTTATCGAATTGA+TGG | - | chr4.3:27412122-27412141 | MS.gene006936:intron | 25.0% |
| ! | TAGAAATCTTCATCAATACA+GGG | - | chr4.3:27414151-27414170 | MS.gene006936:CDS | 25.0% |
| ! | TATATATACAACAACTTCTC+TGG | - | chr4.3:27412719-27412738 | MS.gene006936:intron | 25.0% |
| ! | TCAAACAAATATGATGTAAG+AGG | + | chr4.3:27414693-27414712 | None:intergenic | 25.0% |
| ! | TGCACAAATAATAAAACACA+TGG | - | chr4.3:27409988-27410007 | MS.gene006936:intron | 25.0% |
| ! | TGGAATATGTTGAAATTTCA+TGG | - | chr4.3:27413088-27413107 | MS.gene006936:intron | 25.0% |
| ! | TGGGAAAAGAATAAAATCAT+AGG | + | chr4.3:27410094-27410113 | None:intergenic | 25.0% |
| ! | TTATCCAAAGCAATCTTAAT+TGG | - | chr4.3:27409280-27409299 | MS.gene006936:CDS | 25.0% |
| ! | TTATGTAGTAAAAGTCGAAA+CGG | + | chr4.3:27410264-27410283 | None:intergenic | 25.0% |
| !! | AGATACGTTTTGCAAATTTT+GGG | - | chr4.3:27412451-27412470 | MS.gene006936:intron | 25.0% |
| !! | ATTTTCCCTCTCATTATTTT+TGG | - | chr4.3:27413186-27413205 | MS.gene006936:intron | 25.0% |
| !! | ATTTTCTTTCTACAATCTCA+TGG | - | chr4.3:27409875-27409894 | MS.gene006936:intron | 25.0% |
| !! | GGTAAAAAAAATCATTTTGG+AGG | - | chr4.3:27411580-27411599 | MS.gene006936:intron | 25.0% |
| !! | TGATAAAGGTATATAGTTTC+AGG | - | chr4.3:27409965-27409984 | MS.gene006936:intron | 25.0% |
| !! | TTAATTACTCGAGAGATTTT+GGG | + | chr4.3:27411937-27411956 | None:intergenic | 25.0% |
| !! | TTATTATTATGGGTGAGTTT+TGG | - | chr4.3:27411359-27411378 | MS.gene006936:intron | 25.0% |
| !! | TTTAATTACTCGAGAGATTT+TGG | + | chr4.3:27411938-27411957 | None:intergenic | 25.0% |
| !!! | ATTTTTTCCCTATTCTTCAA+TGG | - | chr4.3:27408615-27408634 | MS.gene006936:intron | 25.0% |
| !!! | GGTTTTATAAATGGCAAAAA+TGG | - | chr4.3:27413264-27413283 | MS.gene006936:intron | 25.0% |
| !!! | TATTGATTTTAGCATGCAAT+TGG | + | chr4.3:27412610-27412629 | None:intergenic | 25.0% |
| !!! | TATTTTTGATACAGCAAATG+TGG | - | chr4.3:27414449-27414468 | MS.gene006936:CDS | 25.0% |
| !!! | TGCATAGTAGGTTTTATAAA+TGG | - | chr4.3:27413255-27413274 | MS.gene006936:intron | 25.0% |
| !!! | TGTTTTTACACATCATACAA+AGG | + | chr4.3:27410482-27410501 | None:intergenic | 25.0% |
| !!! | TGTTTTTCAAAACATACATG+AGG | - | chr4.3:27409408-27409427 | MS.gene006936:CDS | 25.0% |
| !!! | TTTCCCATATGTTCTAAAAA+AGG | - | chr4.3:27409195-27409214 | MS.gene006936:intron | 25.0% |
| !!! | TTTCTTTTTGAAATCTTAGG+TGG | - | chr4.3:27412288-27412307 | MS.gene006936:intron | 25.0% |
| !!! | TTTTTTCCCTATTCTTCAAT+GGG | - | chr4.3:27408616-27408635 | MS.gene006936:intron | 25.0% |
| AAAAGCAACAATGGAAAAGA+GGG | - | chr4.3:27414768-27414787 | MS.gene006936:intron | 30.0% | |
| AAAATCAATACACACCCAAT+AGG | - | chr4.3:27412620-27412639 | MS.gene006936:intron | 30.0% | |
| AAACACAAAAAAAGGTCATG+TGG | + | chr4.3:27412070-27412089 | None:intergenic | 30.0% | |
| AAGGAATAAATCCTTCTTCA+TGG | - | chr4.3:27413068-27413087 | MS.gene006936:intron | 30.0% | |
| AATAAGCTCAAAACATCCAT+AGG | + | chr4.3:27414612-27414631 | None:intergenic | 30.0% | |
| ACATTCACATTGTGTAGAAA+TGG | - | chr4.3:27408448-27408467 | MS.gene006936:CDS | 30.0% | |
| ACCTACCATTAAATAGATCT+AGG | + | chr4.3:27411563-27411582 | None:intergenic | 30.0% | |
| ACTAACTAGTTAAGTAACAG+AGG | + | chr4.3:27414320-27414339 | None:intergenic | 30.0% | |
| AGAAGAGGAAGATAACATAA+AGG | - | chr4.3:27414379-27414398 | MS.gene006936:CDS | 30.0% | |
| AGCAATCTTAATTGGATTCA+TGG | - | chr4.3:27409288-27409307 | MS.gene006936:CDS | 30.0% | |
| ATAAGTTAAGTTCAAAAGGG+TGG | + | chr4.3:27408778-27408797 | None:intergenic | 30.0% | |
| ATACAACATTAGGTGTGTAT+TGG | + | chr4.3:27413774-27413793 | None:intergenic | 30.0% | |
| ATACACACCTAATGTTGTAT+TGG | - | chr4.3:27413774-27413793 | MS.gene006936:intron | 30.0% | |
| ATAGAATTTGACAAACCTGT+GGG | + | chr4.3:27408712-27408731 | None:intergenic | 30.0% | |
| ATATTGTGAAACTTACAGTG+AGG | + | chr4.3:27413165-27413184 | None:intergenic | 30.0% | |
| ATTTGTCTATCTTCCAAATG+TGG | + | chr4.3:27413852-27413871 | None:intergenic | 30.0% | |
| CAAGGTCAGATTTAAAGATT+TGG | + | chr4.3:27408658-27408677 | None:intergenic | 30.0% | |
| CACAAAATATGATGTTCACA+AGG | + | chr4.3:27413977-27413996 | None:intergenic | 30.0% | |
| CCTACCATTAAATAGATCTA+GGG | + | chr4.3:27411562-27411581 | None:intergenic | 30.0% | |
| CGATTTGTATAGCATGAATA+CGG | + | chr4.3:27410192-27410211 | None:intergenic | 30.0% | |
| GAAGTAAGTTCATTGAAACA+TGG | + | chr4.3:27412689-27412708 | None:intergenic | 30.0% | |
| GAAGTTATACTCTAGATTCA+AGG | - | chr4.3:27411127-27411146 | MS.gene006936:intron | 30.0% | |
| GAATAAAATCATAGGACAAG+CGG | + | chr4.3:27410086-27410105 | None:intergenic | 30.0% | |
| GAATCCAATTAAGATTGCTT+TGG | + | chr4.3:27409287-27409306 | None:intergenic | 30.0% | |
| GATCAACTCTATGTTACAAA+TGG | + | chr4.3:27409641-27409660 | None:intergenic | 30.0% | |
| GATTTGTATAGCATGAATAC+GGG | + | chr4.3:27410191-27410210 | None:intergenic | 30.0% | |
| GGATGGAAATAAAGAAATGA+TGG | - | chr4.3:27413370-27413389 | MS.gene006936:intron | 30.0% | |
| GTGATGTTTGCAAAATTGAT+AGG | + | chr4.3:27414221-27414240 | None:intergenic | 30.0% | |
| TAAAAGCAACAATGGAAAAG+AGG | - | chr4.3:27414767-27414786 | MS.gene006936:intron | 30.0% | |
| TACACACCTAATGTTGTATT+GGG | - | chr4.3:27413775-27413794 | MS.gene006936:intron | 30.0% | |
| TAGATTGGAAAATTGCATGA+AGG | - | chr4.3:27413049-27413068 | MS.gene006936:intron | 30.0% | |
| TATTGTGAAACTTACAGTGA+GGG | + | chr4.3:27413164-27413183 | None:intergenic | 30.0% | |
| TGAAAAACAGAACTCATAAC+AGG | + | chr4.3:27409397-27409416 | None:intergenic | 30.0% | |
| TTCAACATATTCCATGAAGA+AGG | + | chr4.3:27413082-27413101 | None:intergenic | 30.0% | |
| TTGAAATAGACCAGCAAAAA+AGG | + | chr4.3:27409119-27409138 | None:intergenic | 30.0% | |
| TTGAGAAGCAAATAATGAGT+TGG | + | chr4.3:27412941-27412960 | None:intergenic | 30.0% | |
| TTTATTAATGATTGCAGGCT+AGG | - | chr4.3:27409241-27409260 | MS.gene006936:intron | 30.0% | |
| ! | AACATAGAGTTGATCTCTAT+AGG | - | chr4.3:27409646-27409665 | MS.gene006936:CDS | 30.0% |
| ! | AAGCATACCCTTTAAGAAAT+AGG | - | chr4.3:27409920-27409939 | MS.gene006936:intron | 30.0% |
| ! | ACCCTTTAAGAAATAGGAAA+AGG | - | chr4.3:27409926-27409945 | MS.gene006936:intron | 30.0% |
| ! | AGGTTGGATTATCAACTTTT+AGG | - | chr4.3:27414063-27414082 | MS.gene006936:intron | 30.0% |
| ! | CAGATACGTTTTGCAAATTT+TGG | - | chr4.3:27412450-27412469 | MS.gene006936:intron | 30.0% |
| ! | TTCATGCAATTTTCCAATCT+AGG | + | chr4.3:27413050-27413069 | None:intergenic | 30.0% |
| ! | TTTAAATCTGACCTTGTTTC+TGG | - | chr4.3:27408662-27408681 | MS.gene006936:intron | 30.0% |
| ! | TTTTTCCCTATTCTTCAATG+GGG | - | chr4.3:27408617-27408636 | MS.gene006936:intron | 30.0% |
| !! | ATTATTTCTGTCTTCTGATG+TGG | - | chr4.3:27413022-27413041 | MS.gene006936:intron | 30.0% |
| !! | GCCTTTTCCTATTTCTTAAA+GGG | + | chr4.3:27409930-27409949 | None:intergenic | 30.0% |
| !! | GTGAGTTTTGGTATTTGTTT+TGG | - | chr4.3:27411371-27411390 | MS.gene006936:intron | 30.0% |
| !! | TCTATTGCTTCACTTGTTTT+AGG | - | chr4.3:27409022-27409041 | MS.gene006936:intron | 30.0% |
| !! | TGACCGTTTTTAAGAACTAT+GGG | - | chr4.3:27410772-27410791 | MS.gene006936:intron | 30.0% |
| !! | TTGACCGTTTTTAAGAACTA+TGG | - | chr4.3:27410771-27410790 | MS.gene006936:intron | 30.0% |
| !!! | TCTTCTGTGTTTTGAAATCA+AGG | - | chr4.3:27412872-27412891 | MS.gene006936:intron | 30.0% |
| AAAAACGACTCCAAAGAAAG+CGG | + | chr4.3:27413896-27413915 | None:intergenic | 35.0% | |
| AAAGCAACAATGGAAAAGAG+GGG | - | chr4.3:27414769-27414788 | MS.gene006936:intron | 35.0% | |
| AAATTTCATGGAAGTCACCT+TGG | - | chr4.3:27413100-27413119 | MS.gene006936:intron | 35.0% | |
| AAGCTTCACTAGGAATTCTA+AGG | - | chr4.3:27409137-27409156 | MS.gene006936:intron | 35.0% | |
| AAGGCCTAAAACAGTAATGA+TGG | - | chr4.3:27414103-27414122 | MS.gene006936:CDS | 35.0% | |
| ACAAGTGAAGCAATAGAAAC+AGG | + | chr4.3:27409019-27409038 | None:intergenic | 35.0% | |
| ACAATGTGAATGTGAATGCA+TGG | + | chr4.3:27408441-27408460 | None:intergenic | 35.0% | |
| ACATCACATATCTCAATGAC+AGG | - | chr4.3:27414234-27414253 | MS.gene006936:intron | 35.0% | |
| AGAACAGCATAAATAAGTGG+AGG | + | chr4.3:27408968-27408987 | None:intergenic | 35.0% | |
| AGACTAGTGTATTTGACTCA+TGG | - | chr4.3:27413593-27413612 | MS.gene006936:intron | 35.0% | |
| AGATGACAATGCTATTGATC+AGG | - | chr4.3:27414043-27414062 | MS.gene006936:intron | 35.0% | |
| AGGCCTAAAACAGTAATGAT+GGG | - | chr4.3:27414104-27414123 | MS.gene006936:CDS | 35.0% | |
| AGTAAAAGTCGAAACGGAAA+TGG | + | chr4.3:27410258-27410277 | None:intergenic | 35.0% | |
| ATAGATCTAGGGACCAAAAT+CGG | + | chr4.3:27411551-27411570 | None:intergenic | 35.0% | |
| ATAGTAGCTAGAATTTCACC+CGG | - | chr4.3:27412345-27412364 | MS.gene006936:intron | 35.0% | |
| ATATCAGTCAAAAACGAGGT+TGG | - | chr4.3:27410708-27410727 | MS.gene006936:intron | 35.0% | |
| ATCTTAATTGGATTCATGGC+TGG | - | chr4.3:27409292-27409311 | MS.gene006936:CDS | 35.0% | |
| ATGCTCAAAATAAGAAAGCC+TGG | + | chr4.3:27414191-27414210 | None:intergenic | 35.0% | |
| ATTATCAATGTGTCAGTGTG+TGG | + | chr4.3:27409617-27409636 | None:intergenic | 35.0% | |
| CAACAACTTAAGAGCTTACT+TGG | - | chr4.3:27409337-27409356 | MS.gene006936:CDS | 35.0% | |
| CAAGGAGTTAAAAGCAACAA+TGG | - | chr4.3:27414759-27414778 | MS.gene006936:intron | 35.0% | |
| CAATAGTAAGACCAGAAACA+AGG | + | chr4.3:27408676-27408695 | None:intergenic | 35.0% | |
| CACTTACATAGTCCAACAAT+TGG | + | chr4.3:27408858-27408877 | None:intergenic | 35.0% | |
| CAGCCCATAGTTCTTAAAAA+CGG | + | chr4.3:27410778-27410797 | None:intergenic | 35.0% | |
| CATAGAATTTGACAAACCTG+TGG | + | chr4.3:27408713-27408732 | None:intergenic | 35.0% | |
| CCAAGAACAGCATAAATAAG+TGG | + | chr4.3:27408971-27408990 | None:intergenic | 35.0% | |
| CCACTTATTTATGCTGTTCT+TGG | - | chr4.3:27408968-27408987 | MS.gene006936:intron | 35.0% | |
| CCCTAGATCTATTTAATGGT+AGG | - | chr4.3:27411559-27411578 | MS.gene006936:intron | 35.0% | |
| CGCTTCCAAAAATAATGAGA+GGG | + | chr4.3:27413194-27413213 | None:intergenic | 35.0% | |
| CGTTAATTGCTCTGTCAAAA+TGG | - | chr4.3:27410747-27410766 | MS.gene006936:intron | 35.0% | |
| GAAATCAAGGCTCAAAATCA+TGG | - | chr4.3:27412885-27412904 | MS.gene006936:intron | 35.0% | |
| GAGATTATGACACACATAAG+AGG | + | chr4.3:27412849-27412868 | None:intergenic | 35.0% | |
| GAGTATATCAGTCAAAAACG+AGG | - | chr4.3:27410704-27410723 | MS.gene006936:intron | 35.0% | |
| GATATTTATGCGTGCATAGT+AGG | - | chr4.3:27413243-27413262 | MS.gene006936:intron | 35.0% | |
| GGAACAATGGCATAAGAAAA+AGG | + | chr4.3:27413753-27413772 | None:intergenic | 35.0% | |
| GTCATCTCTTGTCAATCAAA+AGG | + | chr4.3:27414030-27414049 | None:intergenic | 35.0% | |
| TAGAACCCCATTGAAGAATA+GGG | + | chr4.3:27408625-27408644 | None:intergenic | 35.0% | |
| TCAGCTGTTAATAACAATGC+AGG | - | chr4.3:27413673-27413692 | MS.gene006936:intron | 35.0% | |
| TGGTCCCTAGATCTATTTAA+TGG | - | chr4.3:27411555-27411574 | MS.gene006936:intron | 35.0% | |
| TGTGTCTTGCAAATGTCATA+AGG | + | chr4.3:27412102-27412121 | None:intergenic | 35.0% | |
| TTACATAGTCCAACAATTGG+AGG | + | chr4.3:27408855-27408874 | None:intergenic | 35.0% | |
| TTAGAACCCCATTGAAGAAT+AGG | + | chr4.3:27408626-27408645 | None:intergenic | 35.0% | |
| TTAGCATAGCATGTCACATA+GGG | + | chr4.3:27409483-27409502 | None:intergenic | 35.0% | |
| TTAGGTGTGTATTGGAACAA+TGG | + | chr4.3:27413766-27413785 | None:intergenic | 35.0% | |
| TTTAGCATAGCATGTCACAT+AGG | + | chr4.3:27409484-27409503 | None:intergenic | 35.0% | |
| TTTCTATATATGTCTGTCCC+TGG | + | chr4.3:27414137-27414156 | None:intergenic | 35.0% | |
| ! | ACTCTTCTAAGTGTTATTGC+TGG | - | chr4.3:27414576-27414595 | MS.gene006936:intron | 35.0% |
| ! | CACATGAGAGTATGTTTAGA+GGG | - | chr4.3:27410652-27410671 | MS.gene006936:CDS | 35.0% |
| ! | GTTTTTATCTCAGTCCAGTT+AGG | - | chr4.3:27413910-27413929 | MS.gene006936:intron | 35.0% |
| ! | TAATGATGGGGAATATACCA+GGG | - | chr4.3:27414117-27414136 | MS.gene006936:CDS | 35.0% |
| ! | TCACATGAGAGTATGTTTAG+AGG | - | chr4.3:27410651-27410670 | MS.gene006936:CDS | 35.0% |
| ! | TCTAAGTGTTATTGCTGGAA+TGG | - | chr4.3:27414581-27414600 | MS.gene006936:intron | 35.0% |
| ! | TGAACTTATCTCAGTTGGTA+GGG | - | chr4.3:27409522-27409541 | MS.gene006936:intron | 35.0% |
| ! | TGAATGCATGGAGAAAGTAT+TGG | + | chr4.3:27408429-27408448 | None:intergenic | 35.0% |
| ! | TTCCCCATCATTACTGTTTT+AGG | + | chr4.3:27414110-27414129 | None:intergenic | 35.0% |
| ! | TTTCAGCTTTTCTATGACCT+CGG | + | chr4.3:27414926-27414945 | None:intergenic | 35.0% |
| !! | AAGTGGAATCTCACTTTTCA+AGG | - | chr4.3:27414741-27414760 | MS.gene006936:intron | 35.0% |
| !! | CCTCAAAAAAGACTAGTCTT+AGG | - | chr4.3:27408584-27408603 | MS.gene006936:CDS | 35.0% |
| !! | GAATGCATGGAGAAAGTATT+GGG | + | chr4.3:27408428-27408447 | None:intergenic | 35.0% |
| !! | GGCCTTTTCCTATTTCTTAA+AGG | + | chr4.3:27409931-27409950 | None:intergenic | 35.0% |
| !! | GTCAAATACACTAGTCTTCT+CGG | + | chr4.3:27413590-27413609 | None:intergenic | 35.0% |
| !! | TTTTAGGCCTTGTAATTTGC+AGG | + | chr4.3:27414094-27414113 | None:intergenic | 35.0% |
| !! | TTTTGTAAGGTGCTTTTGTG+AGG | + | chr4.3:27408497-27408516 | None:intergenic | 35.0% |
| !!! | AAAGCTAAAATCGCCGATTT+TGG | - | chr4.3:27411535-27411554 | MS.gene006936:intron | 35.0% |
| !!! | ATGTGTGATTTTTTGTGCAG+TGG | - | chr4.3:27409718-27409737 | MS.gene006936:CDS | 35.0% |
| !!! | CCTAAGACTAGTCTTTTTTG+AGG | + | chr4.3:27408587-27408606 | None:intergenic | 35.0% |
| !!! | CTTACTTCAACCTTTTTTGC+TGG | - | chr4.3:27409106-27409125 | MS.gene006936:CDS | 35.0% |
| AAAGTCCGAAATTCGAACCT+CGG | - | chr4.3:27409563-27409582 | MS.gene006936:CDS | 40.0% | |
| AATTTGACAAACCTGTGGGA+TGG | + | chr4.3:27408708-27408727 | None:intergenic | 40.0% | |
| ACACATTACCTGACATTTCC+AGG | + | chr4.3:27414430-27414449 | None:intergenic | 40.0% | |
| ACTTCCTGCTATGTAACAAC+AGG | - | chr4.3:27413425-27413444 | MS.gene006936:intron | 40.0% | |
| AGAAAGCGGTTAACATCACA+AGG | + | chr4.3:27413882-27413901 | None:intergenic | 40.0% | |
| AGAACCTGTTGTTACATAGC+AGG | + | chr4.3:27413432-27413451 | None:intergenic | 40.0% | |
| AGCATGTCACATAGGGATAA+GGG | + | chr4.3:27409476-27409495 | None:intergenic | 40.0% | |
| ATAAATGCATGCAGAGCATG+AGG | - | chr4.3:27412790-27412809 | MS.gene006936:intron | 40.0% | |
| ATCATAGTCACAGCAGTGAT+TGG | - | chr4.3:27413802-27413821 | MS.gene006936:intron | 40.0% | |
| ATCATATTAGGACGCTACGA+TGG | - | chr4.3:27414348-27414367 | MS.gene006936:CDS | 40.0% | |
| ATTGCGCCCAATACAACATT+AGG | + | chr4.3:27413784-27413803 | None:intergenic | 40.0% | |
| ATTGGGTGTATGAATGTGGT+TGG | - | chr4.3:27413395-27413414 | MS.gene006936:intron | 40.0% | |
| CTGGTTCAAGTCAAGTTTCA+AGG | - | chr4.3:27410795-27410814 | MS.gene006936:intron | 40.0% | |
| GACAATGCTATTGATCAGGT+TGG | - | chr4.3:27414047-27414066 | MS.gene006936:intron | 40.0% | |
| GAGGAAACCAAAGCTATTCT+GGG | - | chr4.3:27412809-27412828 | MS.gene006936:intron | 40.0% | |
| GCAAATCTTCCTCCAATTGT+TGG | - | chr4.3:27408843-27408862 | MS.gene006936:intron | 40.0% | |
| GCGCTTCCAAAAATAATGAG+AGG | + | chr4.3:27413195-27413214 | None:intergenic | 40.0% | |
| GCTAGTTGAAGAAACAGAAC+AGG | + | chr4.3:27409085-27409104 | None:intergenic | 40.0% | |
| GGATACTCCTGCAAATTACA+AGG | - | chr4.3:27414084-27414103 | MS.gene006936:CDS | 40.0% | |
| GGCCTAAAACAGTAATGATG+GGG | - | chr4.3:27414105-27414124 | MS.gene006936:CDS | 40.0% | |
| GGTCTATTTCAAGCTTCACT+AGG | - | chr4.3:27409127-27409146 | MS.gene006936:CDS | 40.0% | |
| GTATGCTTACACGCAGAAAA+TGG | + | chr4.3:27409908-27409927 | None:intergenic | 40.0% | |
| GTGAAAACTGGCATTATCAC+TGG | - | chr4.3:27413130-27413149 | MS.gene006936:intron | 40.0% | |
| GTGAACTTATCTCAGTTGGT+AGG | - | chr4.3:27409521-27409540 | MS.gene006936:intron | 40.0% | |
| GTGATGTTAACCGCTTTCTT+TGG | - | chr4.3:27413883-27413902 | MS.gene006936:intron | 40.0% | |
| GTTCAAGTCAAGTTTCAAGG+TGG | - | chr4.3:27410798-27410817 | MS.gene006936:intron | 40.0% | |
| TACACGCAGAAAATGGACAA+GGG | + | chr4.3:27409901-27409920 | None:intergenic | 40.0% | |
| TAGCATGTCACATAGGGATA+AGG | + | chr4.3:27409477-27409496 | None:intergenic | 40.0% | |
| TCGTGGCAAACAATAGTGAT+GGG | - | chr4.3:27409741-27409760 | MS.gene006936:CDS | 40.0% | |
| TGAGATTCCACTTGTGTCAA+TGG | + | chr4.3:27414734-27414753 | None:intergenic | 40.0% | |
| TGAGGAAACCAAAGCTATTC+TGG | - | chr4.3:27412808-27412827 | MS.gene006936:intron | 40.0% | |
| TGTATTCTGACAGCTTGTGT+TGG | - | chr4.3:27414888-27414907 | MS.gene006936:CDS | 40.0% | |
| TGTTACATAGCAGGAAGTGA+AGG | + | chr4.3:27413423-27413442 | None:intergenic | 40.0% | |
| TTACACGCAGAAAATGGACA+AGG | + | chr4.3:27409902-27409921 | None:intergenic | 40.0% | |
| TTCTGATGTGGTTCCTAGAT+TGG | - | chr4.3:27413034-27413053 | MS.gene006936:intron | 40.0% | |
| TTTCCAGGACCAAAAATCGA+AGG | + | chr4.3:27414415-27414434 | None:intergenic | 40.0% | |
| ! | AAGTGTTATTGCTGGAATGG+TGG | - | chr4.3:27414584-27414603 | MS.gene006936:intron | 40.0% |
| ! | ACACTCAAGCCTTCGATTTT+TGG | - | chr4.3:27414403-27414422 | MS.gene006936:CDS | 40.0% |
| ! | AGTGATGGGAATTTGCTTCT+TGG | - | chr4.3:27409755-27409774 | MS.gene006936:CDS | 40.0% |
| ! | GACAACCTTTTCTTGACAGT+TGG | - | chr4.3:27414979-27414998 | MS.gene006936:CDS | 40.0% |
| ! | GAGGTGTTTGTCCTTTGAAT+TGG | + | chr4.3:27408568-27408587 | None:intergenic | 40.0% |
| ! | GATTTTGGGCCTGTTTGTTT+TGG | + | chr4.3:27411923-27411942 | None:intergenic | 40.0% |
| ! | GTAATGATGGGGAATATACC+AGG | - | chr4.3:27414116-27414135 | MS.gene006936:CDS | 40.0% |
| !! | AAAACGAGGTTGGCTTGATT+TGG | - | chr4.3:27410718-27410737 | MS.gene006936:intron | 40.0% |
| !! | AAACAGGAAGGTATTGCAGT+AGG | - | chr4.3:27413314-27413333 | MS.gene006936:intron | 40.0% |
| !! | ACGATGGATTGAAGAAGAAG+AGG | - | chr4.3:27414364-27414383 | MS.gene006936:CDS | 40.0% |
| !! | CGTTTTTAAGAACTATGGGC+TGG | - | chr4.3:27410776-27410795 | MS.gene006936:intron | 40.0% |
| !! | TCATTTTGGAGGTCAGACAA+AGG | - | chr4.3:27411591-27411610 | MS.gene006936:intron | 40.0% |
| !! | TTTTTGGTCCTGGAAATGTC+AGG | - | chr4.3:27414419-27414438 | MS.gene006936:CDS | 40.0% |
| !!! | TTTTTTTTCTGTGGTGTCCG+AGG | + | chr4.3:27409583-27409602 | None:intergenic | 40.0% |
| AACAGAACAGGTTCTGCTGA+AGG | + | chr4.3:27409073-27409092 | None:intergenic | 45.0% | |
| AATTGGCGTAGAGGATCATC+AGG | + | chr4.3:27408551-27408570 | None:intergenic | 45.0% | |
| AGGGAAGCTACAAGAATACC+AGG | - | chr4.3:27414170-27414189 | MS.gene006936:CDS | 45.0% | |
| AGGGATTGAAGTTCGAACTC+CGG | + | chr4.3:27412367-27412386 | None:intergenic | 45.0% | |
| AGTAATGTCCGTGACAGTGA+TGG | - | chr4.3:27413720-27413739 | MS.gene006936:CDS | 45.0% | |
| ATGAACTCACTGCAACAGCA+AGG | + | chr4.3:27413936-27413955 | None:intergenic | 45.0% | |
| ATGCTGTTCTTGGAAGCTCA+AGG | - | chr4.3:27408978-27408997 | MS.gene006936:intron | 45.0% | |
| ATTGGCGTAGAGGATCATCA+GGG | + | chr4.3:27408550-27408569 | None:intergenic | 45.0% | |
| CCAACTGAGATAAGTTCACG+AGG | + | chr4.3:27409520-27409539 | None:intergenic | 45.0% | |
| CCTCGTGAACTTATCTCAGT+TGG | - | chr4.3:27409517-27409536 | MS.gene006936:intron | 45.0% | |
| CCTCTCCAACTGTCAAGAAA+AGG | + | chr4.3:27414987-27415006 | None:intergenic | 45.0% | |
| CTGGGAAACTACAAAGTGGA+TGG | - | chr4.3:27413353-27413372 | MS.gene006936:intron | 45.0% | |
| CTTGGTCTAGTCGTGAAAAC+TGG | - | chr4.3:27413118-27413137 | MS.gene006936:intron | 45.0% | |
| GACACAGTTTGATCAACCCT+GGG | - | chr4.3:27410033-27410052 | MS.gene006936:intron | 45.0% | |
| GATCCTCTACGCCAATTCAA+AGG | - | chr4.3:27408554-27408573 | MS.gene006936:CDS | 45.0% | |
| GGCAATTGGGTGTATGAATG+TGG | - | chr4.3:27413391-27413410 | MS.gene006936:intron | 45.0% | |
| GTATAGCATGAATACGGGCA+TGG | + | chr4.3:27410186-27410205 | None:intergenic | 45.0% | |
| GTCGTGGCAAACAATAGTGA+TGG | - | chr4.3:27409740-27409759 | MS.gene006936:CDS | 45.0% | |
| GTCTATCTTCCAAATGTGGC+AGG | + | chr4.3:27413848-27413867 | None:intergenic | 45.0% | |
| TGACACAGTTTGATCAACCC+TGG | - | chr4.3:27410032-27410051 | MS.gene006936:intron | 45.0% | |
| TGCTGTTCTTGGAAGCTCAA+GGG | - | chr4.3:27408979-27408998 | MS.gene006936:intron | 45.0% | |
| TGGAGGAAGATTTGCAAGCT+TGG | + | chr4.3:27408838-27408857 | None:intergenic | 45.0% | |
| TGTATGTGCTTCTTCCGTCT+TGG | + | chr4.3:27415049-27415068 | None:intergenic | 45.0% | |
| TGTCCTTTGAATTGGCGTAG+AGG | + | chr4.3:27408560-27408579 | None:intergenic | 45.0% | |
| ! | AGGACAAGCGGTTTGAGTTT+GGG | + | chr4.3:27410074-27410093 | None:intergenic | 45.0% |
| ! | CAGTTTTCACGACTAGACCA+AGG | + | chr4.3:27413120-27413139 | None:intergenic | 45.0% |
| ! | CCTTTTCTTGACAGTTGGAG+AGG | - | chr4.3:27414984-27415003 | MS.gene006936:CDS | 45.0% |
| ! | TAGGACAAGCGGTTTGAGTT+TGG | + | chr4.3:27410075-27410094 | None:intergenic | 45.0% |
| ! | TTTTCTATGACCTCGGCAAG+AGG | + | chr4.3:27414919-27414938 | None:intergenic | 45.0% |
| !! | AATGGAAAAGAGGGGTGTTG+AGG | - | chr4.3:27414777-27414796 | MS.gene006936:intron | 45.0% |
| !! | AGCTCTGGGAAACTACAAAG+TGG | - | chr4.3:27413349-27413368 | MS.gene006936:intron | 45.0% |
| !! | AGGAAGGTATTGCAGTAGGA+AGG | - | chr4.3:27413318-27413337 | MS.gene006936:intron | 45.0% |
| !! | TGTAAGGTGCTTTTGTGAGG+TGG | + | chr4.3:27408494-27408513 | None:intergenic | 45.0% |
| !!! | AAGCCTTCGATTTTTGGTCC+TGG | - | chr4.3:27414409-27414428 | MS.gene006936:CDS | 45.0% |
| !!! | GATTTTTTGTGCAGTGGTCG+TGG | - | chr4.3:27409724-27409743 | MS.gene006936:CDS | 45.0% |
| !! | TAAAAATAAAAAAAAAAGAT+AGG | + | chr4.3:27411167-27411186 | None:intergenic | 5.0% |
| !!! | ATAACTTTTTATTATTATTT+TGG | - | chr4.3:27410454-27410473 | MS.gene006936:intron | 5.0% |
| AAGCTATTCTGGGTCTCTGC+TGG | - | chr4.3:27412819-27412838 | MS.gene006936:intron | 50.0% | |
| AGCTCAAGGGATCTAGCAGT+AGG | - | chr4.3:27408992-27409011 | MS.gene006936:intron | 50.0% | |
| AGGAAGGACATTTGCAGCTC+TGG | - | chr4.3:27413334-27413353 | MS.gene006936:intron | 50.0% | |
| AGGCAGCAGGGATATCAATG+AGG | + | chr4.3:27413828-27413847 | None:intergenic | 50.0% | |
| CTTCTTCCGTCTTGGTTGAC+TGG | + | chr4.3:27415041-27415060 | None:intergenic | 50.0% | |
| GAAGAGCCAGTCAACCAAGA+CGG | - | chr4.3:27415032-27415051 | MS.gene006936:CDS | 50.0% | |
| GAGTGTCACCATCACTGTCA+CGG | + | chr4.3:27413731-27413750 | None:intergenic | 50.0% | |
| GCAGAGACCCAGAATAGCTT+TGG | + | chr4.3:27412819-27412838 | None:intergenic | 50.0% | |
| GGAAGGACATTTGCAGCTCT+GGG | - | chr4.3:27413335-27413354 | MS.gene006936:intron | 50.0% | |
| GGGATTGAAGTTCGAACTCC+GGG | + | chr4.3:27412366-27412385 | None:intergenic | 50.0% | |
| GGTGTCCGAGGTTCGAATTT+CGG | + | chr4.3:27409571-27409590 | None:intergenic | 50.0% | |
| GTCACTGTCTATGTCGTGTC+TGG | - | chr4.3:27410157-27410176 | MS.gene006936:CDS | 50.0% | |
| GTCAGTGAATGAACGTCCCA+GGG | + | chr4.3:27410052-27410071 | None:intergenic | 50.0% | |
| ! | TGAGTTGGAGATGAGAGCAG+TGG | + | chr4.3:27412926-27412945 | None:intergenic | 50.0% |
| ! | TGTGTCAGTGTGTAGCTCTG+AGG | + | chr4.3:27410019-27410038 | None:intergenic | 50.0% |
| !! | AAAAGAGGGGTGTTGAGGCA+AGG | - | chr4.3:27414782-27414801 | MS.gene006936:intron | 50.0% |
| !! | AAGGTGCTTTTGTGAGGTGG+TGG | + | chr4.3:27408491-27408510 | None:intergenic | 50.0% |
| !! | TGTGAGGTGGTGGAACAACT+TGG | + | chr4.3:27408481-27408500 | None:intergenic | 50.0% |
| CTGCAACAGCAAGGCCTAAC+TGG | + | chr4.3:27413927-27413946 | None:intergenic | 55.0% | |
| CTTCTCTGGCACAGAGTGCA+TGG | - | chr4.3:27412733-27412752 | MS.gene006936:intron | 55.0% | |
| CTTGACAGTTGGAGAGGCTG+TGG | - | chr4.3:27414990-27415009 | MS.gene006936:CDS | 55.0% | |
| GACAAACCTGTGGGATGGCT+AGG | + | chr4.3:27408703-27408722 | None:intergenic | 55.0% | |
| GGTCAGTGAATGAACGTCCC+AGG | + | chr4.3:27410053-27410072 | None:intergenic | 55.0% | |
| GTGAGCGCCATTGACACAAG+TGG | - | chr4.3:27414724-27414743 | MS.gene006936:intron | 55.0% | |
| TCCAAATGTGGCAGGCAGCA+GGG | + | chr4.3:27413840-27413859 | None:intergenic | 55.0% | |
| TGCTGGAATGGTGGCACCTA+TGG | - | chr4.3:27414593-27414612 | MS.gene006936:intron | 55.0% | |
| TTCCAAATGTGGCAGGCAGC+AGG | + | chr4.3:27413841-27413860 | None:intergenic | 55.0% | |
| ! | GTTGGTGAATCCTCTTGCCG+AGG | - | chr4.3:27414906-27414925 | MS.gene006936:CDS | 55.0% |
| TCCCTGCTGCCTGCCACATT+TGG | - | chr4.3:27413836-27413855 | MS.gene006936:intron | 60.0% | |
| ! | TGCTAGCCTAGCCATCCCAC+AGG | - | chr4.3:27408694-27408713 | MS.gene006936:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 27408419 | 27415086 | 27408419 | ID=MS.gene006936 |
| chr4.3 | mRNA | 27408419 | 27415086 | 27408419 | ID=MS.gene006936.t1;Parent=MS.gene006936 |
| chr4.3 | exon | 27414790 | 27415086 | 27414790 | ID=MS.gene006936.t1.exon1;Parent=MS.gene006936.t1 |
| chr4.3 | CDS | 27414790 | 27415086 | 27414790 | ID=cds.MS.gene006936.t1;Parent=MS.gene006936.t1 |
| chr4.3 | exon | 27414635 | 27414683 | 27414635 | ID=MS.gene006936.t1.exon2;Parent=MS.gene006936.t1 |
| chr4.3 | CDS | 27414635 | 27414683 | 27414635 | ID=cds.MS.gene006936.t1;Parent=MS.gene006936.t1 |
| chr4.3 | exon | 27414347 | 27414554 | 27414347 | ID=MS.gene006936.t1.exon3;Parent=MS.gene006936.t1 |
| chr4.3 | CDS | 27414347 | 27414554 | 27414347 | ID=cds.MS.gene006936.t1;Parent=MS.gene006936.t1 |
| chr4.3 | exon | 27414076 | 27414247 | 27414076 | ID=MS.gene006936.t1.exon4;Parent=MS.gene006936.t1 |
| chr4.3 | CDS | 27414076 | 27414247 | 27414076 | ID=cds.MS.gene006936.t1;Parent=MS.gene006936.t1 |
| chr4.3 | exon | 27413702 | 27413767 | 27413702 | ID=MS.gene006936.t1.exon5;Parent=MS.gene006936.t1 |
| chr4.3 | CDS | 27413702 | 27413767 | 27413702 | ID=cds.MS.gene006936.t1;Parent=MS.gene006936.t1 |
| chr4.3 | exon | 27410588 | 27410701 | 27410588 | ID=MS.gene006936.t1.exon6;Parent=MS.gene006936.t1 |
| chr4.3 | CDS | 27410588 | 27410701 | 27410588 | ID=cds.MS.gene006936.t1;Parent=MS.gene006936.t1 |
| chr4.3 | exon | 27410337 | 27410453 | 27410337 | ID=MS.gene006936.t1.exon7;Parent=MS.gene006936.t1 |
| chr4.3 | CDS | 27410337 | 27410453 | 27410337 | ID=cds.MS.gene006936.t1;Parent=MS.gene006936.t1 |
| chr4.3 | exon | 27410059 | 27410185 | 27410059 | ID=MS.gene006936.t1.exon8;Parent=MS.gene006936.t1 |
| chr4.3 | CDS | 27410059 | 27410185 | 27410059 | ID=cds.MS.gene006936.t1;Parent=MS.gene006936.t1 |
| chr4.3 | exon | 27409560 | 27409846 | 27409560 | ID=MS.gene006936.t1.exon9;Parent=MS.gene006936.t1 |
| chr4.3 | CDS | 27409560 | 27409846 | 27409560 | ID=cds.MS.gene006936.t1;Parent=MS.gene006936.t1 |
| chr4.3 | exon | 27409250 | 27409440 | 27409250 | ID=MS.gene006936.t1.exon10;Parent=MS.gene006936.t1 |
| chr4.3 | CDS | 27409250 | 27409440 | 27409250 | ID=cds.MS.gene006936.t1;Parent=MS.gene006936.t1 |
| chr4.3 | exon | 27409065 | 27409147 | 27409065 | ID=MS.gene006936.t1.exon11;Parent=MS.gene006936.t1 |
| chr4.3 | CDS | 27409065 | 27409147 | 27409065 | ID=cds.MS.gene006936.t1;Parent=MS.gene006936.t1 |
| chr4.3 | exon | 27408707 | 27408783 | 27408707 | ID=MS.gene006936.t1.exon12;Parent=MS.gene006936.t1 |
| chr4.3 | CDS | 27408707 | 27408783 | 27408707 | ID=cds.MS.gene006936.t1;Parent=MS.gene006936.t1 |
| chr4.3 | exon | 27408419 | 27408604 | 27408419 | ID=MS.gene006936.t1.exon13;Parent=MS.gene006936.t1 |
| chr4.3 | CDS | 27408419 | 27408604 | 27408419 | ID=cds.MS.gene006936.t1;Parent=MS.gene006936.t1 |
| Gene Sequence |
| Protein sequence |
