Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052232.t1 | XP_003602002.1 | 97.6 | 654 | 16 | 0 | 1 | 654 | 1 | 654 | 0.00E+00 | 1228.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052232.t1 | O04722 | 67.0 | 627 | 206 | 1 | 24 | 649 | 46 | 672 | 4.5e-240 | 832.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052232.t1 | G7J4D0 | 97.6 | 654 | 16 | 0 | 1 | 654 | 1 | 654 | 0.0e+00 | 1228.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052232 | MS.gene75452 | 0.991729 | 3.19E-189 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052232.t1 | MTR_3g087740 | 97.554 | 654 | 16 | 0 | 1 | 654 | 1 | 654 | 0.0 | 1297 |
| MS.gene052232.t1 | MTR_5g061860 | 62.519 | 651 | 233 | 5 | 12 | 653 | 2 | 650 | 0.0 | 835 |
| MS.gene052232.t1 | MTR_3g073730 | 62.404 | 649 | 232 | 4 | 12 | 654 | 15 | 657 | 0.0 | 815 |
| MS.gene052232.t1 | MTR_5g061860 | 64.738 | 553 | 187 | 3 | 12 | 556 | 2 | 554 | 0.0 | 735 |
| MS.gene052232.t1 | MTR_3g087730 | 54.154 | 650 | 280 | 7 | 13 | 651 | 12 | 654 | 0.0 | 705 |
| MS.gene052232.t1 | MTR_5g061880 | 55.705 | 596 | 257 | 4 | 57 | 649 | 56 | 647 | 0.0 | 690 |
| MS.gene052232.t1 | MTR_3g073780 | 56.208 | 596 | 255 | 4 | 57 | 649 | 59 | 651 | 0.0 | 663 |
| MS.gene052232.t1 | MTR_2g008470 | 52.951 | 593 | 275 | 4 | 57 | 648 | 61 | 650 | 0.0 | 611 |
| MS.gene052232.t1 | MTR_2g008470 | 52.951 | 593 | 275 | 4 | 57 | 648 | 80 | 669 | 0.0 | 611 |
| MS.gene052232.t1 | MTR_3g073780 | 56.955 | 532 | 224 | 3 | 57 | 586 | 59 | 587 | 0.0 | 608 |
| MS.gene052232.t1 | MTR_3g073780 | 58.367 | 502 | 206 | 2 | 57 | 556 | 59 | 559 | 0.0 | 590 |
| MS.gene052232.t1 | MTR_2g102243 | 47.249 | 618 | 319 | 5 | 40 | 653 | 29 | 643 | 0.0 | 580 |
| MS.gene052232.t1 | MTR_4g011970 | 46.799 | 656 | 336 | 7 | 1 | 652 | 3 | 649 | 0.0 | 577 |
| MS.gene052232.t1 | MTR_7g095430 | 47.557 | 614 | 315 | 5 | 40 | 649 | 24 | 634 | 0.0 | 573 |
| MS.gene052232.t1 | MTR_1g071530 | 47.326 | 617 | 317 | 5 | 37 | 650 | 27 | 638 | 0.0 | 567 |
| MS.gene052232.t1 | MTR_2g102243 | 48.029 | 558 | 282 | 5 | 40 | 592 | 29 | 583 | 0.0 | 538 |
| MS.gene052232.t1 | MTR_4g084620 | 46.181 | 576 | 303 | 4 | 79 | 652 | 66 | 636 | 0.0 | 534 |
| MS.gene052232.t1 | MTR_4g084640 | 42.337 | 659 | 346 | 8 | 2 | 651 | 5 | 638 | 1.31e-180 | 528 |
| MS.gene052232.t1 | MTR_7g095430 | 47.455 | 550 | 283 | 4 | 40 | 586 | 24 | 570 | 3.26e-177 | 516 |
| MS.gene052232.t1 | MTR_6g086170 | 42.978 | 591 | 327 | 5 | 62 | 650 | 42 | 624 | 3.56e-168 | 495 |
| MS.gene052232.t1 | MTR_7g022870 | 34.950 | 598 | 367 | 10 | 59 | 649 | 54 | 636 | 5.10e-108 | 342 |
| MS.gene052232.t1 | MTR_7g022870 | 35.581 | 534 | 323 | 9 | 59 | 586 | 54 | 572 | 7.81e-98 | 311 |
| MS.gene052232.t1 | MTR_6g024420 | 47.191 | 89 | 36 | 1 | 277 | 365 | 89 | 166 | 3.40e-18 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052232.t1 | AT5G10180 | 67.038 | 628 | 206 | 1 | 23 | 649 | 45 | 672 | 0.0 | 875 |
| MS.gene052232.t1 | AT1G77990 | 60.380 | 631 | 247 | 2 | 19 | 646 | 33 | 663 | 0.0 | 786 |
| MS.gene052232.t1 | AT4G08620 | 56.131 | 579 | 251 | 3 | 75 | 652 | 67 | 643 | 0.0 | 647 |
| MS.gene052232.t1 | AT1G22150 | 54.195 | 596 | 270 | 3 | 55 | 649 | 55 | 648 | 0.0 | 637 |
| MS.gene052232.t1 | AT1G22150 | 54.195 | 596 | 270 | 3 | 55 | 649 | 55 | 648 | 0.0 | 637 |
| MS.gene052232.t1 | AT1G22150 | 54.195 | 596 | 270 | 3 | 55 | 649 | 55 | 648 | 0.0 | 637 |
| MS.gene052232.t1 | AT1G78000 | 54.195 | 596 | 270 | 3 | 55 | 649 | 52 | 645 | 0.0 | 620 |
| MS.gene052232.t1 | AT1G78000 | 54.195 | 596 | 270 | 3 | 55 | 649 | 52 | 645 | 0.0 | 620 |
| MS.gene052232.t1 | AT1G78000 | 54.195 | 596 | 270 | 3 | 55 | 649 | 52 | 645 | 0.0 | 620 |
| MS.gene052232.t1 | AT1G78000 | 54.659 | 558 | 251 | 2 | 55 | 612 | 52 | 607 | 0.0 | 591 |
| MS.gene052232.t1 | AT3G51895 | 46.720 | 625 | 327 | 5 | 27 | 649 | 62 | 682 | 0.0 | 583 |
| MS.gene052232.t1 | AT3G51895 | 46.203 | 632 | 334 | 5 | 20 | 649 | 10 | 637 | 0.0 | 583 |
| MS.gene052232.t1 | AT1G22150 | 54.511 | 532 | 240 | 2 | 55 | 586 | 55 | 584 | 0.0 | 578 |
| MS.gene052232.t1 | AT1G78000 | 54.953 | 535 | 239 | 2 | 55 | 589 | 52 | 584 | 0.0 | 569 |
| MS.gene052232.t1 | AT3G15990 | 46.677 | 617 | 320 | 6 | 40 | 651 | 33 | 645 | 0.0 | 566 |
| MS.gene052232.t1 | AT1G23090 | 45.118 | 594 | 321 | 4 | 57 | 648 | 30 | 620 | 0.0 | 535 |
| MS.gene052232.t1 | AT4G02700 | 44.677 | 620 | 328 | 8 | 37 | 649 | 16 | 627 | 3.96e-179 | 524 |
| MS.gene052232.t1 | AT1G78000 | 57.883 | 444 | 187 | 0 | 55 | 498 | 52 | 495 | 2.01e-171 | 499 |
| MS.gene052232.t1 | AT5G19600 | 42.169 | 581 | 321 | 6 | 74 | 652 | 59 | 626 | 5.45e-164 | 484 |
| MS.gene052232.t1 | AT1G78000 | 54.767 | 451 | 202 | 2 | 139 | 589 | 1 | 449 | 1.92e-160 | 469 |
| MS.gene052232.t1 | AT1G23090 | 44.196 | 491 | 269 | 4 | 160 | 648 | 1 | 488 | 2.63e-145 | 432 |
| MS.gene052232.t1 | AT1G23090 | 44.196 | 491 | 269 | 4 | 160 | 648 | 1 | 488 | 2.63e-145 | 432 |
| MS.gene052232.t1 | AT1G23090 | 44.196 | 491 | 269 | 4 | 160 | 648 | 1 | 488 | 2.63e-145 | 432 |
| MS.gene052232.t1 | AT3G12520 | 36.082 | 582 | 350 | 10 | 75 | 649 | 47 | 613 | 2.97e-111 | 349 |
| MS.gene052232.t1 | AT3G12520 | 36.082 | 582 | 350 | 10 | 75 | 649 | 63 | 629 | 3.74e-111 | 349 |
| MS.gene052232.t1 | AT5G13550 | 36.088 | 593 | 343 | 13 | 71 | 649 | 72 | 642 | 8.65e-105 | 333 |
| MS.gene052232.t1 | AT3G12520 | 37.090 | 488 | 286 | 9 | 75 | 556 | 63 | 535 | 3.42e-95 | 303 |
Find 138 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTATAGATGTTGCCAAAAT+TGG | 0.147839 | 3.2:+74822139 | MS.gene052232:CDS |
| TAAATGAAGCTTACAAAATT+TGG | 0.156014 | 3.2:+74824676 | MS.gene052232:CDS |
| ATACCTTTCTTTAACGAAAT+TGG | 0.161463 | 3.2:-74827414 | None:intergenic |
| CATCCTAACTACTAGATTTC+TGG | 0.176456 | 3.2:+74821847 | MS.gene052232:CDS |
| AGCAACAATAAGTCCAATTT+TGG | 0.188347 | 3.2:-74822152 | None:intergenic |
| AAAGGAAGAAGAACCTATTT+TGG | 0.251709 | 3.2:+74821963 | MS.gene052232:CDS |
| CAATTGATGCCAACCAAAAT+AGG | 0.258456 | 3.2:-74821976 | None:intergenic |
| AAAATTGTGAAACATGTTAA+AGG | 0.263404 | 3.2:+74822067 | MS.gene052232:CDS |
| GCTTGTGCTGGTGCCTTCTT+TGG | 0.265451 | 3.2:+74824723 | MS.gene052232:CDS |
| TCAAACTTTGTCAACAAAAT+AGG | 0.270223 | 3.2:+74828285 | MS.gene052232:CDS |
| AATTTATACTGCAGGGTAAA+AGG | 0.270631 | 3.2:+74821945 | MS.gene052232:intron |
| GGTATCTTTCAAACTTCCTT+TGG | 0.278546 | 3.2:+74820617 | MS.gene052232:CDS |
| CTGTCACATGCTGCAATTGT+TGG | 0.291169 | 3.2:+74820773 | MS.gene052232:CDS |
| GACAGAGATTATGTCTGTTT+TGG | 0.295111 | 3.2:-74820870 | None:intergenic |
| CTCTGTCTTGAAAGCTGTTT+GGG | 0.295702 | 3.2:+74820886 | MS.gene052232:CDS |
| TTTCTTGCAACTCTCTTTGC+TGG | 0.296098 | 3.2:+74820596 | MS.gene052232:CDS |
| ATCAAATGGGTCACTCAAAA+AGG | 0.303980 | 3.2:+74827536 | MS.gene052232:CDS |
| CACCTCCGGAATTGCTTCTA+TGG | 0.307560 | 3.2:+74827930 | MS.gene052232:CDS |
| TATCCTGGGAGGCTCATTCT+TGG | 0.312035 | 3.2:+74821820 | MS.gene052232:CDS |
| GCAAACCTTGCTCCTCAATA+TGG | 0.318170 | 3.2:+74820231 | MS.gene052232:CDS |
| CGACCAAGCACAGAAACTTT+AGG | 0.318996 | 3.2:+74827278 | MS.gene052232:CDS |
| AAACTTCCTTTGGACTATTC+AGG | 0.330923 | 3.2:+74820627 | MS.gene052232:CDS |
| ATCAAGTTGGTATCCTTTGA+TGG | 0.351175 | 3.2:-74822416 | None:intergenic |
| CAACAGTTGAAGGGACTGTT+TGG | 0.351591 | 3.2:+74820830 | MS.gene052232:CDS |
| AAATTGTGAAACATGTTAAA+GGG | 0.359971 | 3.2:+74822068 | MS.gene052232:CDS |
| TCTCTGTCTTGAAAGCTGTT+TGG | 0.360550 | 3.2:+74820885 | MS.gene052232:CDS |
| CTATTTGCTTCTGTGGAGAT+TGG | 0.361323 | 3.2:+74824750 | MS.gene052232:CDS |
| CTTGACTTTCTTGCTTGTGC+TGG | 0.369935 | 3.2:+74824711 | MS.gene052232:CDS |
| TCATTTCAAGGATCATCAAA+TGG | 0.381535 | 3.2:+74827522 | MS.gene052232:intron |
| GCTACACTGTTGCTAAGTTT+AGG | 0.382970 | 3.2:+74819939 | MS.gene052232:CDS |
| CCTATGGCAATTCAGATTCC+CGG | 0.385176 | 3.2:+74827344 | MS.gene052232:CDS |
| TTCGTTGCTGTTATCATCAA+TGG | 0.386524 | 3.2:+74820520 | MS.gene052232:CDS |
| TAACCAATTGGATCAGTAGA+AGG | 0.387370 | 3.2:-74820560 | None:intergenic |
| GTTAAAGTCTAACTGATTGA+TGG | 0.387724 | 3.2:-74822107 | None:intergenic |
| CCGCTTATCTACGCTGTAAT+GGG | 0.390859 | 3.2:+74820458 | MS.gene052232:CDS |
| TTCCTCCATAGAAGCAATTC+CGG | 0.396969 | 3.2:-74827935 | None:intergenic |
| GAAACTTTAGGAAAACTTCC+TGG | 0.399741 | 3.2:+74827290 | MS.gene052232:CDS |
| TGCTAGTCTTTGTATTCCTC+AGG | 0.401203 | 3.2:+74819988 | MS.gene052232:CDS |
| ATGAGCTTTGTATAACCAAT+TGG | 0.401366 | 3.2:-74820572 | None:intergenic |
| ATCAAAGGATACCAACTTGA+TGG | 0.406300 | 3.2:+74822418 | MS.gene052232:CDS |
| TTTCCTAAAGTTTCTGTGCT+TGG | 0.410600 | 3.2:-74827281 | None:intergenic |
| AAGTGATATCATCACTGTTA+TGG | 0.416628 | 3.2:-74824568 | None:intergenic |
| ACCTCCTGCTATGTTGCAAC+TGG | 0.423328 | 3.2:+74822490 | MS.gene052232:CDS |
| TCTAACTGATTGATGGAACT+TGG | 0.427366 | 3.2:-74822100 | None:intergenic |
| TCACCAGAAATCTAGTAGTT+AGG | 0.428939 | 3.2:-74821850 | None:intergenic |
| CTTCTGCCCCAAACAAGAAT+AGG | 0.441826 | 3.2:-74819917 | None:intergenic |
| CAATATGACTTCTTCAACAG+TGG | 0.450224 | 3.2:+74819676 | None:intergenic |
| GTGATTCTCTCTGCATTACC+TGG | 0.450525 | 3.2:+74824642 | MS.gene052232:CDS |
| ACTGAAGCAATAATAGCAAT+TGG | 0.451582 | 3.2:-74824621 | None:intergenic |
| TCACAGAACAGATCGGTTCC+AGG | 0.455205 | 3.2:-74827308 | None:intergenic |
| ATGCCAATTTCGTTAAAGAA+AGG | 0.460508 | 3.2:+74827411 | MS.gene052232:CDS |
| ACCGCTTATCTACGCTGTAA+TGG | 0.465139 | 3.2:+74820457 | MS.gene052232:CDS |
| CTGCATATCCTCAAAGGTGC+AGG | 0.468675 | 3.2:-74819702 | None:intergenic |
| CAGCCACATGCCAAGGACTT+GGG | 0.470723 | 3.2:-74819790 | None:intergenic |
| AACAAAGAGATGATGTCAAT+AGG | 0.476714 | 3.2:+74822442 | MS.gene052232:CDS |
| AGCAAATAGTACACCAAAGA+AGG | 0.478871 | 3.2:-74824736 | None:intergenic |
| ACATCAAGAGAAATAGCAAT+TGG | 0.480431 | 3.2:+74820482 | MS.gene052232:CDS |
| ACAGCCACATGCCAAGGACT+TGG | 0.481415 | 3.2:-74819791 | None:intergenic |
| GCAATTGTTGGATTTGTAGC+AGG | 0.489329 | 3.2:+74820785 | MS.gene052232:CDS |
| CCTCCCAGGATAAAATTATG+AGG | 0.494655 | 3.2:-74821809 | None:intergenic |
| CATTTCAAGGATCATCAAAT+GGG | 0.494851 | 3.2:+74827523 | MS.gene052232:intron |
| AGAATGTTCAGCAGGATGTA+AGG | 0.495220 | 3.2:+74819738 | MS.gene052232:CDS |
| CTATGGCAATTCAGATTCCC+GGG | 0.499013 | 3.2:+74827345 | MS.gene052232:CDS |
| AGCAATTGGTCCTGTGGCAG+TGG | 0.499663 | 3.2:+74820496 | MS.gene052232:CDS |
| TTTGGCAACATCTATAACAT+GGG | 0.501179 | 3.2:-74822134 | None:intergenic |
| GACCCTTCTACTGATCCAAT+TGG | 0.501614 | 3.2:+74820557 | MS.gene052232:CDS |
| GCAGGAGCTGCCATTGTGAT+TGG | 0.504037 | 3.2:+74820803 | MS.gene052232:CDS |
| TGGTGTACTATTTGCTTCTG+TGG | 0.508569 | 3.2:+74824743 | MS.gene052232:CDS |
| ACAGCTGTTAATTATGCTGC+TGG | 0.510483 | 3.2:+74824513 | MS.gene052232:CDS |
| CATGTTTCAATGTAGAGCAT+AGG | 0.511277 | 3.2:+74820195 | MS.gene052232:intron |
| AGTGGAACCCTGCACCTTTG+AGG | 0.512094 | 3.2:+74819694 | MS.gene052232:CDS |
| TTATAGGAATCTGTTGCTGT+TGG | 0.512660 | 3.2:+74822379 | MS.gene052232:intron |
| TCTCTTTGTTTCCATCAAGT+TGG | 0.512891 | 3.2:-74822429 | None:intergenic |
| ATAGGCTTCACAAACATCAT+AGG | 0.513032 | 3.2:+74822460 | MS.gene052232:CDS |
| CCTTGAGAAGAATGTTCAGC+AGG | 0.521003 | 3.2:+74819730 | MS.gene052232:CDS |
| TTTAATATCAAACATTGTGA+TGG | 0.523087 | 3.2:+74824545 | MS.gene052232:CDS |
| TCATTTATGTCTATGAGTCC+AGG | 0.523123 | 3.2:-74824660 | None:intergenic |
| GATGACAAGGGAAATTCAAA+AGG | 0.524692 | 3.2:+74827566 | MS.gene052232:CDS |
| CTGCACCTTTGAGGATATGC+AGG | 0.529377 | 3.2:+74819703 | MS.gene052232:CDS |
| GATTGGTCTTCAACAGTTGA+AGG | 0.534417 | 3.2:+74820820 | MS.gene052232:CDS |
| TTTGTCTACACATGGAAAGC+AGG | 0.534478 | 3.2:+74827969 | MS.gene052232:CDS |
| ACACCAAGAATGAGCCTCCC+AGG | 0.537266 | 3.2:-74821823 | None:intergenic |
| TAACAGGTTGGGGTTCCTTG+TGG | 0.537909 | 3.2:+74820745 | MS.gene052232:intron |
| ATGTGGCTGTAGATTCTTTG+AGG | 0.539831 | 3.2:+74819804 | MS.gene052232:CDS |
| TTGTGTATCACTTGCCACCT+CGG | 0.540238 | 3.2:-74828252 | None:intergenic |
| AGTACCAGTTGCAACATAGC+AGG | 0.544189 | 3.2:-74822494 | None:intergenic |
| TGAAGCTTACAAAATTTGGA+AGG | 0.547138 | 3.2:+74824680 | MS.gene052232:CDS |
| AGCAACGAAACCACTGCCAC+AGG | 0.553209 | 3.2:-74820506 | None:intergenic |
| GAATCTACAGCCACATGCCA+AGG | 0.554742 | 3.2:-74819797 | None:intergenic |
| CAACCTGCAAAACTGAAAGT+AGG | 0.562947 | 3.2:-74819889 | None:intergenic |
| AAAGTCCATATTGAGGAGCA+AGG | 0.564726 | 3.2:-74820236 | None:intergenic |
| AGCCACATGCCAAGGACTTG+GGG | 0.565471 | 3.2:-74819789 | None:intergenic |
| AAAAGGATTGGAAGATGACA+AGG | 0.575608 | 3.2:+74827553 | MS.gene052232:CDS |
| AATTGTGAAACATGTTAAAG+GGG | 0.579312 | 3.2:+74822069 | MS.gene052232:CDS |
| AGCTTACAAAGTCCATATTG+AGG | 0.583569 | 3.2:-74820243 | None:intergenic |
| TACAAATGTTTGTCTACACA+TGG | 0.587075 | 3.2:+74827961 | MS.gene052232:CDS |
| TTGCCACCTCGGATTTGCAA+TGG | 0.587105 | 3.2:-74828241 | None:intergenic |
| GCAAGTGATACACAAGCTAA+AGG | 0.587263 | 3.2:+74828260 | MS.gene052232:CDS |
| GTCAAGAATGACAAGTTGAA+TGG | 0.587521 | 3.2:-74827591 | None:intergenic |
| ATACAGATTATCATAACCCC+GGG | 0.588485 | 3.2:-74827362 | None:intergenic |
| CCTGCTGAACATTCTTCTCA+AGG | 0.592117 | 3.2:-74819730 | None:intergenic |
| CCGGGAATCTGAATTGCCAT+AGG | 0.592416 | 3.2:-74827344 | None:intergenic |
| TGTGGAGATTGGTCTTCTAG+TGG | 0.595857 | 3.2:+74824761 | MS.gene052232:CDS |
| CATACAGATTATCATAACCC+CGG | 0.597270 | 3.2:-74827363 | None:intergenic |
| TAATGATTTACTCACAGTAA+GGG | 0.597465 | 3.2:-74822182 | None:intergenic |
| GCAGGATGTAAGGTCTCAGT+GGG | 0.600047 | 3.2:+74819748 | MS.gene052232:CDS |
| TTGGTGAACATTGACACCTC+CGG | 0.600078 | 3.2:+74827916 | MS.gene052232:CDS |
| ATTGGTCTTCAACAGTTGAA+GGG | 0.601705 | 3.2:+74820821 | MS.gene052232:CDS |
| GTCCACCTGCATATCCTCAA+AGG | 0.606805 | 3.2:-74819708 | None:intergenic |
| GAGCATAGGATATGCAACAT+TGG | 0.607902 | 3.2:+74820209 | MS.gene052232:intron |
| TGATGTTGATCAGTATCCTA+TGG | 0.611939 | 3.2:+74827328 | MS.gene052232:CDS |
| AACCAATTGGATCAGTAGAA+GGG | 0.611963 | 3.2:-74820559 | None:intergenic |
| GACAATATAACTGATACAAG+TGG | 0.621918 | 3.2:-74822001 | None:intergenic |
| CCCATTACAGCGTAGATAAG+CGG | 0.624118 | 3.2:-74820458 | None:intergenic |
| AGAAATAGCAATTGGTCCTG+TGG | 0.627791 | 3.2:+74820490 | MS.gene052232:CDS |
| CTCCGGAATTGCTTCTATGG+AGG | 0.630529 | 3.2:+74827933 | MS.gene052232:CDS |
| TGCATATCCTCAAAGGTGCA+GGG | 0.631006 | 3.2:-74819701 | None:intergenic |
| CTCCCAGGATAAAATTATGA+GGG | 0.631885 | 3.2:-74821808 | None:intergenic |
| CACCTTTGAGGATATGCAGG+TGG | 0.639656 | 3.2:+74819706 | MS.gene052232:CDS |
| TACAAAGACTAGCAATAGTG+AGG | 0.640532 | 3.2:-74819979 | None:intergenic |
| GCCACATGCCAAGGACTTGG+GGG | 0.642052 | 3.2:-74819788 | None:intergenic |
| AACTTTGTCAACAAAATAGG+TGG | 0.642212 | 3.2:+74828288 | MS.gene052232:CDS |
| AGTTGGCCATTGCAAATCCG+AGG | 0.642668 | 3.2:+74828235 | MS.gene052232:intron |
| TTGGCAACATCTATAACATG+GGG | 0.647480 | 3.2:-74822133 | None:intergenic |
| GGAGATTGGTCTTCTAGTGG+CGG | 0.651104 | 3.2:+74824764 | MS.gene052232:CDS |
| AGCAGGATGTAAGGTCTCAG+TGG | 0.652010 | 3.2:+74819747 | MS.gene052232:CDS |
| TCTCTAAGTGATCAATCATG+TGG | 0.653134 | 3.2:+74819860 | MS.gene052232:CDS |
| ATCAACATCACAGAACAGAT+CGG | 0.657581 | 3.2:-74827315 | None:intergenic |
| CTCCATAGAAGCAATTCCGG+AGG | 0.672446 | 3.2:-74827932 | None:intergenic |
| ACCAGTTGCAACATAGCAGG+AGG | 0.674997 | 3.2:-74822491 | None:intergenic |
| CCACATGCCAAGGACTTGGG+GGG | 0.677369 | 3.2:-74819787 | None:intergenic |
| ATTGTGAAACATGTTAAAGG+GGG | 0.682427 | 3.2:+74822070 | MS.gene052232:CDS |
| TGGCCATTGCAAATCCGAGG+TGG | 0.687093 | 3.2:+74828238 | MS.gene052232:CDS |
| TATGGCAATTCAGATTCCCG+GGG | 0.688950 | 3.2:+74827346 | MS.gene052232:CDS |
| AAAGGATTGGAAGATGACAA+GGG | 0.694432 | 3.2:+74827554 | MS.gene052232:CDS |
| ATTACAGCGTAGATAAGCGG+TGG | 0.699477 | 3.2:-74820455 | None:intergenic |
| CATGTGACAGAAAATCCACA+AGG | 0.704335 | 3.2:-74820760 | None:intergenic |
| CTGTTGAAGACCAATCACAA+TGG | 0.727102 | 3.2:-74820813 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 74819680 | 74828368 | 74819680 | ID=MS.gene052232 |
| chr3.2 | mRNA | 74819680 | 74828368 | 74819680 | ID=MS.gene052232.t1;Parent=MS.gene052232 |
| chr3.2 | exon | 74819680 | 74820009 | 74819680 | ID=MS.gene052232.t1.exon1;Parent=MS.gene052232.t1 |
| chr3.2 | CDS | 74819680 | 74820009 | 74819680 | ID=cds.MS.gene052232.t1;Parent=MS.gene052232.t1 |
| chr3.2 | exon | 74820210 | 74820258 | 74820210 | ID=MS.gene052232.t1.exon2;Parent=MS.gene052232.t1 |
| chr3.2 | CDS | 74820210 | 74820258 | 74820210 | ID=cds.MS.gene052232.t1;Parent=MS.gene052232.t1 |
| chr3.2 | exon | 74820441 | 74820648 | 74820441 | ID=MS.gene052232.t1.exon3;Parent=MS.gene052232.t1 |
| chr3.2 | CDS | 74820441 | 74820648 | 74820441 | ID=cds.MS.gene052232.t1;Parent=MS.gene052232.t1 |
| chr3.2 | exon | 74820751 | 74820925 | 74820751 | ID=MS.gene052232.t1.exon4;Parent=MS.gene052232.t1 |
| chr3.2 | CDS | 74820751 | 74820925 | 74820751 | ID=cds.MS.gene052232.t1;Parent=MS.gene052232.t1 |
| chr3.2 | exon | 74821803 | 74821868 | 74821803 | ID=MS.gene052232.t1.exon5;Parent=MS.gene052232.t1 |
| chr3.2 | CDS | 74821803 | 74821868 | 74821803 | ID=cds.MS.gene052232.t1;Parent=MS.gene052232.t1 |
| chr3.2 | exon | 74821959 | 74822189 | 74821959 | ID=MS.gene052232.t1.exon6;Parent=MS.gene052232.t1 |
| chr3.2 | CDS | 74821959 | 74822189 | 74821959 | ID=cds.MS.gene052232.t1;Parent=MS.gene052232.t1 |
| chr3.2 | exon | 74822385 | 74822511 | 74822385 | ID=MS.gene052232.t1.exon7;Parent=MS.gene052232.t1 |
| chr3.2 | CDS | 74822385 | 74822511 | 74822385 | ID=cds.MS.gene052232.t1;Parent=MS.gene052232.t1 |
| chr3.2 | exon | 74824499 | 74824785 | 74824499 | ID=MS.gene052232.t1.exon8;Parent=MS.gene052232.t1 |
| chr3.2 | CDS | 74824499 | 74824785 | 74824499 | ID=cds.MS.gene052232.t1;Parent=MS.gene052232.t1 |
| chr3.2 | exon | 74827239 | 74827432 | 74827239 | ID=MS.gene052232.t1.exon9;Parent=MS.gene052232.t1 |
| chr3.2 | CDS | 74827239 | 74827432 | 74827239 | ID=cds.MS.gene052232.t1;Parent=MS.gene052232.t1 |
| chr3.2 | exon | 74827532 | 74827620 | 74827532 | ID=MS.gene052232.t1.exon10;Parent=MS.gene052232.t1 |
| chr3.2 | CDS | 74827532 | 74827620 | 74827532 | ID=cds.MS.gene052232.t1;Parent=MS.gene052232.t1 |
| chr3.2 | exon | 74827914 | 74827990 | 74827914 | ID=MS.gene052232.t1.exon11;Parent=MS.gene052232.t1 |
| chr3.2 | CDS | 74827914 | 74827990 | 74827914 | ID=cds.MS.gene052232.t1;Parent=MS.gene052232.t1 |
| chr3.2 | exon | 74828237 | 74828368 | 74828237 | ID=MS.gene052232.t1.exon12;Parent=MS.gene052232.t1 |
| chr3.2 | CDS | 74828237 | 74828368 | 74828237 | ID=cds.MS.gene052232.t1;Parent=MS.gene052232.t1 |
| Gene Sequence |
| Protein sequence |