AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene39949

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39949.t1 MTR_1g071530 98.628 656 9 0 1 656 1 656 0.0 1336
MS.gene39949.t1 MTR_7g095430 83.308 659 104 4 1 656 1 656 0.0 1095
MS.gene39949.t1 MTR_7g095430 86.387 573 75 3 1 573 1 570 0.0 985
MS.gene39949.t1 MTR_2g102243 57.387 643 274 0 3 645 5 647 0.0 769
MS.gene39949.t1 MTR_4g084620 55.864 648 281 3 4 649 1 645 0.0 753
MS.gene39949.t1 MTR_5g061880 55.112 626 280 1 21 645 30 655 0.0 747
MS.gene39949.t1 MTR_4g084640 55.590 644 276 2 10 645 3 644 0.0 745
MS.gene39949.t1 MTR_4g011970 56.230 626 274 0 20 645 29 654 0.0 737
MS.gene39949.t1 MTR_2g102243 58.261 575 240 0 3 577 5 579 0.0 709
MS.gene39949.t1 MTR_6g086170 52.194 638 298 4 15 649 3 636 0.0 702
MS.gene39949.t1 MTR_3g073780 54.299 628 283 3 21 645 33 659 0.0 701
MS.gene39949.t1 MTR_2g008470 53.409 616 285 2 20 634 53 667 0.0 674
MS.gene39949.t1 MTR_2g008470 53.409 616 285 2 20 634 34 648 0.0 674
MS.gene39949.t1 MTR_3g073780 55.315 555 244 3 21 572 33 586 0.0 642
MS.gene39949.t1 MTR_3g073780 56.357 527 227 2 21 544 33 559 0.0 623
MS.gene39949.t1 MTR_5g061860 47.191 623 316 5 26 637 26 646 0.0 583
MS.gene39949.t1 MTR_3g087740 46.591 616 323 5 27 638 37 650 0.0 575
MS.gene39949.t1 MTR_3g073730 44.099 644 344 5 2 637 17 652 0.0 547
MS.gene39949.t1 MTR_5g061860 48.302 530 262 4 26 544 26 554 1.33e-174 509
MS.gene39949.t1 MTR_3g087730 38.782 624 362 9 27 636 34 651 8.19e-153 457
MS.gene39949.t1 MTR_7g022870 36.222 577 354 7 65 637 70 636 1.70e-128 395
MS.gene39949.t1 MTR_7g022870 37.305 512 307 7 65 572 70 571 1.31e-113 353
MS.gene39949.t1 MTR_6g024420 29.801 151 85 4 202 352 35 164 2.50e-15 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39949.t1 AT3G51895 74.394 660 163 4 1 656 1 658 0.0 1018
MS.gene39949.t1 AT3G51895 74.394 660 163 4 1 656 46 703 0.0 1018
MS.gene39949.t1 AT4G02700 69.702 637 192 1 21 656 10 646 0.0 922
MS.gene39949.t1 AT3G15990 57.030 633 271 1 12 644 19 650 0.0 749
MS.gene39949.t1 AT1G23090 57.005 621 266 1 20 639 3 623 0.0 747
MS.gene39949.t1 AT4G08620 55.049 614 275 1 26 638 28 641 0.0 685
MS.gene39949.t1 AT5G19600 52.548 628 282 4 21 644 15 630 0.0 681
MS.gene39949.t1 AT1G78000 54.560 625 283 1 14 637 21 645 0.0 677
MS.gene39949.t1 AT1G78000 54.560 625 283 1 14 637 21 645 0.0 677
MS.gene39949.t1 AT1G78000 54.560 625 283 1 14 637 21 645 0.0 677
MS.gene39949.t1 AT1G22150 52.742 620 292 1 20 638 30 649 0.0 669
MS.gene39949.t1 AT1G22150 52.742 620 292 1 20 638 30 649 0.0 669
MS.gene39949.t1 AT1G22150 52.742 620 292 1 20 638 30 649 0.0 669
MS.gene39949.t1 AT1G78000 54.514 587 266 1 14 599 21 607 0.0 640
MS.gene39949.t1 AT1G78000 55.000 560 251 1 14 572 21 580 0.0 614
MS.gene39949.t1 AT1G22150 53.430 554 257 1 20 572 30 583 0.0 610
MS.gene39949.t1 AT5G10180 48.701 616 309 6 27 637 59 672 0.0 587
MS.gene39949.t1 AT1G23090 55.193 491 219 1 150 639 1 491 0.0 563
MS.gene39949.t1 AT1G23090 55.193 491 219 1 150 639 1 491 0.0 563
MS.gene39949.t1 AT1G23090 55.193 491 219 1 150 639 1 491 0.0 563
MS.gene39949.t1 AT1G77990 48.616 578 286 4 65 634 89 663 0.0 550
MS.gene39949.t1 AT1G78000 56.051 471 206 1 14 483 21 491 2.20e-176 512
MS.gene39949.t1 AT1G78000 53.933 445 204 1 129 572 1 445 8.72e-162 473
MS.gene39949.t1 AT3G12520 37.435 577 339 9 69 637 51 613 1.56e-126 389
MS.gene39949.t1 AT3G12520 37.435 577 339 9 69 637 67 629 2.93e-126 389
MS.gene39949.t1 AT5G13550 36.174 622 361 12 24 637 49 642 6.79e-125 385
MS.gene39949.t1 AT3G12520 39.085 481 276 7 69 544 67 535 6.33e-109 339

Find 139 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTGTATATTACAGAATT+TGG 0.105263 1.4:-58531872 None:intergenic
ACCCTCTGATTCATCTCTTT+TGG 0.151425 1.4:-58532599 None:intergenic
TGGAGGAAGGTTGGCAAGTT+TGG 0.241408 1.4:-58526110 None:intergenic
GCCAACCTTCCTCCAATTCT+TGG 0.242711 1.4:+58526118 MS.gene39949:CDS
AGAAACAACCGAGGTTCTTT+TGG 0.253280 1.4:+58529050 MS.gene39949:CDS
CGTCTGCATTAGCGCATATA+TGG 0.260758 1.4:+58531656 MS.gene39949:CDS
GCTTGGTGCCCATTCAAATA+TGG 0.263411 1.4:-58526005 None:intergenic
CCGAATGCAAATCGTGTTTC+CGG 0.263737 1.4:+58531908 MS.gene39949:CDS
TTCTTCATCACCTCACTTCC+AGG 0.268686 1.4:-58532475 None:intergenic
GCCGTTGGCGTCCGTTATAC+TGG 0.273981 1.4:+58529087 MS.gene39949:CDS
CTTGCATTGGCAAAGTAAAT+TGG 0.276343 1.4:-58531956 None:intergenic
AAGCTTCATTGGGTCTCTTT+AGG 0.281055 1.4:+58527209 MS.gene39949:CDS
AAGGCCAAGGACATTTGTTT+TGG 0.282863 1.4:+58531841 MS.gene39949:CDS
GTCTTTGGCAGTGTTGAAAT+TGG 0.299924 1.4:+58531684 MS.gene39949:CDS
CAGCAGCTGAAATCAATTCT+AGG 0.300141 1.4:+58528104 MS.gene39949:CDS
GCATATATGGGCGTTGTCTT+TGG 0.305788 1.4:+58531669 MS.gene39949:CDS
AATTTCCTCCTACATCCTTT+TGG 0.307255 1.4:-58532516 None:intergenic
AAAAGGATGTAGGAGGAAAT+TGG 0.320530 1.4:+58532518 MS.gene39949:CDS
CCTATGATTACAGCTTGTTT+TGG 0.325648 1.4:+58532447 MS.gene39949:intron
CTGTCACATGCAGCCATAGT+AGG 0.326137 1.4:+58528047 MS.gene39949:CDS
TTCACGGCCGAACGCGAAAA+TGG 0.329931 1.4:-58531435 None:intergenic
GATGGGTAGTTCAAGGGATT+TGG 0.335800 1.4:+58527057 MS.gene39949:CDS
TTCACAGCTACATTCTTTGC+TGG 0.345288 1.4:+58527178 MS.gene39949:CDS
GAGCTATAATGCCAACAATA+AGG 0.345823 1.4:-58530132 None:intergenic
AACCTCCTCAATGGATCATC+TGG 0.355664 1.4:-58525929 None:intergenic
AAGCATTGCAGATACAATTA+TGG 0.359813 1.4:-58531574 None:intergenic
TTGATAGCTGTGGTCATATA+TGG 0.367436 1.4:-58530103 None:intergenic
TCCGCCATCACTCACAGATT+TGG 0.379445 1.4:+58530069 MS.gene39949:CDS
ACCGTTAATTTATGCAATGA+TGG 0.385050 1.4:+58527039 MS.gene39949:CDS
CCCATCATTGCATAAATTAA+CGG 0.402423 1.4:-58527040 None:intergenic
TATGATGATTACCCATGTTC+AGG 0.406136 1.4:+58525812 MS.gene39949:CDS
AACTCACATAGTCCAAGAAT+TGG 0.411726 1.4:-58526130 None:intergenic
ACCTCTTGCTACCTCACAAC+TGG 0.412059 1.4:+58531320 MS.gene39949:CDS
GAAGACAGAATTAAAGATAC+AGG 0.413818 1.4:+58532123 MS.gene39949:CDS
TTTGGTTATTGCAGTGGAGG+TGG 0.420288 1.4:+58528452 MS.gene39949:intron
TCCTCCCATGAACCCTACTA+TGG 0.424696 1.4:-58528060 None:intergenic
ATGACCACAGCTATCAAAAC+TGG 0.429051 1.4:+58530109 MS.gene39949:CDS
GTCTGCATTAGCGCATATAT+GGG 0.430147 1.4:+58531657 MS.gene39949:CDS
CGTTATACTGGGAAGTGTGC+TGG 0.431245 1.4:+58529099 MS.gene39949:CDS
ATCAAAACTGGCCTTATTGT+TGG 0.431517 1.4:+58530121 MS.gene39949:CDS
AATCTTTAGAATTAGAATTC+CGG 0.433702 1.4:-58531927 None:intergenic
GGCAGTTGGATCTCTTCTGA+TGG 0.434035 1.4:+58527093 MS.gene39949:CDS
TGCAGCCATAGTAGGGTTCA+TGG 0.439490 1.4:+58528055 MS.gene39949:CDS
CTTGGTGCCCATTCAAATAT+GGG 0.439545 1.4:-58526004 None:intergenic
AACAAAGAGATGATAGCTAT+TGG 0.443400 1.4:+58531272 MS.gene39949:CDS
TTTGTTCTATTACACTCCTC+TGG 0.447769 1.4:+58531539 MS.gene39949:CDS
GAAAGAACCAACTATGTTCA+TGG 0.448133 1.4:-58531297 None:intergenic
AGTTCAAGGGATTTGGCAGT+TGG 0.456451 1.4:+58527064 MS.gene39949:CDS
TTGGGTAGGATTAACCTCAT+TGG 0.460340 1.4:-58527128 None:intergenic
TGGCATCACTATTGCTAGCT+TGG 0.462798 1.4:+58526063 MS.gene39949:CDS
CACTTGAACACCGTGGTGCT+CGG 0.463889 1.4:-58529137 None:intergenic
TCTTCTGATGGGTTCCATGT+TGG 0.465867 1.4:+58527105 MS.gene39949:CDS
CCGGAAACACGATTTGCATT+CGG 0.466507 1.4:-58531908 None:intergenic
GCATCCAGCATTATAGTTCA+CGG 0.466809 1.4:-58531451 None:intergenic
TACTATTTGTTGCAAGGCCA+AGG 0.467032 1.4:+58531828 MS.gene39949:CDS
ATTGGAACCATGAACATAGT+TGG 0.470036 1.4:+58531290 MS.gene39949:CDS
ATGCAATGATGGGTAGTTCA+AGG 0.474788 1.4:+58527050 MS.gene39949:CDS
AGGTGGGAAAGCGCTGTGTT+GGG 0.476059 1.4:+58528469 MS.gene39949:CDS
CTCTCTTAAATAGCTTGCAT+TGG 0.477563 1.4:-58531969 None:intergenic
CAGATAGGAGAATTGAAGAA+AGG 0.483632 1.4:+58530040 MS.gene39949:intron
TGATTCTTAAACCTCCTCAA+TGG 0.483943 1.4:-58525938 None:intergenic
ATGAAGCAGCCATCCATCTC+TGG 0.484288 1.4:+58531610 MS.gene39949:CDS
TTGGTTATTGCAGTGGAGGT+GGG 0.486649 1.4:+58528453 MS.gene39949:intron
AGGTTGCAATATCAGTGCTT+CGG 0.492752 1.4:+58531801 MS.gene39949:intron
CTACTATGGCTGCATGTGAC+AGG 0.495854 1.4:-58528046 None:intergenic
GCAGTTGGATCTCTTCTGAT+GGG 0.498638 1.4:+58527094 MS.gene39949:CDS
TTTCCCAAAACAAATGTCCT+TGG 0.500266 1.4:-58531845 None:intergenic
ATAATTGTATCTGCAATGCT+TGG 0.501731 1.4:+58531576 MS.gene39949:CDS
CAACAAATCCAGCTTCCAAA+AGG 0.505659 1.4:+58532501 MS.gene39949:CDS
TTGAAATCTGATCTCATAGC+TGG 0.511965 1.4:+58526043 MS.gene39949:CDS
TGCAATGATGGGTAGTTCAA+GGG 0.512364 1.4:+58527051 MS.gene39949:CDS
GCAGTTGGAACTGTGGCAGT+TGG 0.515482 1.4:+58527079 MS.gene39949:CDS
CCGTTGGCGTCCGTTATACT+GGG 0.520515 1.4:+58529088 MS.gene39949:CDS
ATTTGTCAATCTTCCAGAGA+TGG 0.520606 1.4:-58531623 None:intergenic
TCAACGTTCATTCCTGAACA+TGG 0.525910 1.4:-58525824 None:intergenic
TGTTGGCATTATAGCTCTTG+CGG 0.529365 1.4:+58530138 MS.gene39949:CDS
GAGGTGGGAAAGCGCTGTGT+TGG 0.531070 1.4:+58528468 MS.gene39949:CDS
TCCAAGAATTGGAGGAAGGT+TGG 0.531977 1.4:-58526119 None:intergenic
TGTCACATGCAGCCATAGTA+GGG 0.533525 1.4:+58528048 MS.gene39949:CDS
CCGTTAATTTATGCAATGAT+GGG 0.538397 1.4:+58527040 MS.gene39949:CDS
TGCAATTGACATCACAATGT+TGG 0.540759 1.4:-58531487 None:intergenic
AAGAACTGAAAAGTGTAGCT+TGG 0.541491 1.4:-58526022 None:intergenic
GGTGTCAGCAATGACGCCGT+TGG 0.542147 1.4:+58529072 MS.gene39949:CDS
CAGCACACTTCCCAGTATAA+CGG 0.546747 1.4:-58529098 None:intergenic
GGTTACTACTATTTGTTGCA+AGG 0.547106 1.4:+58531822 MS.gene39949:CDS
TCACATAGTCCAAGAATTGG+AGG 0.548928 1.4:-58526127 None:intergenic
TCGGCCGTGAACTATAATGC+TGG 0.554904 1.4:+58531447 MS.gene39949:CDS
AAAGAGATGAATCAGAGGGT+TGG 0.561882 1.4:+58532602 MS.gene39949:CDS
ATTAACCTCATTGGCCAACA+TGG 0.564213 1.4:-58527119 None:intergenic
GCAGCCATAGTAGGGTTCAT+GGG 0.565129 1.4:+58528056 MS.gene39949:CDS
TCTTTCCAGATGATCCATTG+AGG 0.569076 1.4:+58525924 MS.gene39949:CDS
ACCAAATCTGTGAGTGATGG+CGG 0.569749 1.4:-58530070 None:intergenic
GTTGGAAATATTGATACAAG+TGG 0.570042 1.4:+58532275 MS.gene39949:CDS
CTCAAGGTGGATCGATGAAG+AGG 0.580742 1.4:+58532101 MS.gene39949:CDS
TTATTGTTCATAGGATCTCA+AGG 0.585365 1.4:+58532085 MS.gene39949:intron
CGGATACGATATCAGCAGCA+TGG 0.585791 1.4:-58528142 None:intergenic
GGATACGATATCAGCAGCAT+GGG 0.586482 1.4:-58528141 None:intergenic
GCTAGCTTGGCTATTCCTCA+AGG 0.586902 1.4:+58526076 MS.gene39949:CDS
GTCAATCTTCCAGAGATGGA+TGG 0.590877 1.4:-58531619 None:intergenic
GGGTTCCATGTTGGCCAATG+AGG 0.591059 1.4:+58527114 MS.gene39949:CDS
GTTCTATTACACTCCTCTGG+TGG 0.592713 1.4:+58531542 MS.gene39949:CDS
TTCCAGATGATCCATTGAGG+AGG 0.598956 1.4:+58525927 MS.gene39949:CDS
TTTCAGGAAGGAATAGCTGT+GGG 0.600243 1.4:+58531209 MS.gene39949:intron
CGAGCACCACGGTGTTCAAG+TGG 0.600656 1.4:+58529138 MS.gene39949:CDS
AGAATGTAGCTGTGAAAGCA+AGG 0.605756 1.4:-58527171 None:intergenic
GGATTTGGCAGTTGGAACTG+TGG 0.605836 1.4:+58527072 MS.gene39949:CDS
AAGACAGAATTAAAGATACA+GGG 0.609710 1.4:+58532124 MS.gene39949:CDS
TCCAGCTTCCAAAAGGATGT+AGG 0.611724 1.4:+58532508 MS.gene39949:CDS
TCCCAAAAGAGATGAATCAG+AGG 0.611733 1.4:+58532597 MS.gene39949:CDS
ACCAGTTGTGAGGTAGCAAG+AGG 0.613006 1.4:-58531321 None:intergenic
CCCAGTATAACGGACGCCAA+CGG 0.613528 1.4:-58529088 None:intergenic
ATGCAAGCTATTTAAGAGAG+AGG 0.614022 1.4:+58531972 MS.gene39949:CDS
GTGCAGGTTAGGGTTTATCG+TGG 0.617383 1.4:+58528019 MS.gene39949:intron
AATACCAAATCTGTGAGTGA+TGG 0.625961 1.4:-58530073 None:intergenic
AGCTTCCAAAAGGATGTAGG+AGG 0.626533 1.4:+58532511 MS.gene39949:CDS
CATGGGAGGAGCAGCTACAG+TGG 0.630489 1.4:+58528073 MS.gene39949:CDS
CCCAAAAGAGATGAATCAGA+GGG 0.633313 1.4:+58532598 MS.gene39949:CDS
TTGGCATAGCTAATGCCTTG+AGG 0.644841 1.4:-58526091 None:intergenic
ATAGTCCAAGAATTGGAGGA+AGG 0.645921 1.4:-58526123 None:intergenic
AACGTTGATGAGAGTGTGCA+TGG 0.652394 1.4:+58525839 MS.gene39949:CDS
TTTGGTCAATCCTGGAAGTG+AGG 0.652558 1.4:+58532465 MS.gene39949:CDS
GATGATGTTTACCAGTTGTG+AGG 0.653692 1.4:-58531331 None:intergenic
TTGGTGCCCATTCAAATATG+GGG 0.657181 1.4:-58526003 None:intergenic
AGACAGAATTAAAGATACAG+GGG 0.658453 1.4:+58532125 MS.gene39949:CDS
CAACGTTCATTCCTGAACAT+GGG 0.662994 1.4:-58525823 None:intergenic
TTCACTCACGCCGAGCACCA+CGG 0.668149 1.4:+58529127 MS.gene39949:CDS
AGAGGAGTGTAATAGAACAA+AGG 0.670114 1.4:-58531537 None:intergenic
TTACGAAGTATCTTGTAACA+AGG 0.677468 1.4:-58528513 None:intergenic
ATCATTGCATAAATTAACGG+TGG 0.681126 1.4:-58527037 None:intergenic
GCTGACACCCAAAAGAACCT+CGG 0.684039 1.4:-58529058 None:intergenic
GCCATAGTAGGGTTCATGGG+AGG 0.684143 1.4:+58528059 MS.gene39949:CDS
TGATGAGAGTGTGCATGGTG+TGG 0.685946 1.4:+58525844 MS.gene39949:CDS
TATGTTATACTGGATATGAG+TGG 0.705748 1.4:+58532162 MS.gene39949:CDS
AAATTGGATCTATCTGACAG+TGG 0.706142 1.4:+58532534 MS.gene39949:CDS
ATGGCTGCTAGTACCACCAG+AGG 0.717575 1.4:-58531555 None:intergenic
ATGTAGCTGTGAAAGCAAGG+TGG 0.720087 1.4:-58527168 None:intergenic
TGCAGAGCAAGAAACAACCG+AGG 0.739760 1.4:+58529041 MS.gene39949:intron
TTGTTCATAGGATCTCAAGG+TGG 0.742236 1.4:+58532088 MS.gene39949:intron
TGCTCACCACTTGAACACCG+TGG 0.755603 1.4:-58529144 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAATAATAGCAATAT+GGG + chr1.4:58527352-58527371 MS.gene39949:intron 10.0%
!! AATAAGCTATAAAAAATATT+TGG - chr1.4:58532389-58532408 None:intergenic 10.0%
!! AATTTAATTATTCTGAATTA+AGG + chr1.4:58527516-58527535 MS.gene39949:intron 10.0%
!! ATATATATGTAAAATTTAGA+GGG - chr1.4:58529375-58529394 None:intergenic 10.0%
!! TAAATAAAATAATAGCAATA+TGG + chr1.4:58527351-58527370 MS.gene39949:intron 10.0%
!! TATAAAAATTATCATATTGA+TGG + chr1.4:58531248-58531267 MS.gene39949:CDS 10.0%
!! TATGTTTGTTTATATAAAAT+AGG - chr1.4:58528353-58528372 None:intergenic 10.0%
!!! AAAAAAAAAAAAAAAGGTTT+TGG + chr1.4:58530719-58530738 MS.gene39949:intron 10.0%
!!! AAATATATTATTTTGCTAAT+TGG - chr1.4:58526806-58526825 None:intergenic 10.0%
!!! AAATTAATTTAACTTGAAAT+TGG + chr1.4:58528983-58529002 MS.gene39949:intron 10.0%
!!! ACTAGTTTATATATTTTTTT+GGG + chr1.4:58526741-58526760 MS.gene39949:intron 10.0%
!!! ATAAATATATACCATTTTTT+TGG + chr1.4:58526185-58526204 MS.gene39949:intron 10.0%
!!! GACTAATATATATATTTTTT+TGG + chr1.4:58529988-58530007 MS.gene39949:intron 10.0%
!!! TAAGTAAAAATAATAGTTTT+TGG - chr1.4:58526454-58526473 None:intergenic 10.0%
!! ATCAATAATATTTAAGGAAA+GGG - chr1.4:58527959-58527978 None:intergenic 15.0%
!! ATTTAGTAAAACCAAAAAAA+TGG - chr1.4:58526199-58526218 None:intergenic 15.0%
!! CACATAAAAATTAATCTAAT+CGG - chr1.4:58529175-58529194 None:intergenic 15.0%
!! GATATATATGTAAAATTTAG+AGG - chr1.4:58529376-58529395 None:intergenic 15.0%
!! TAGATGTTTATAGAAATTAT+GGG + chr1.4:58528746-58528765 MS.gene39949:intron 15.0%
!! TATTACATATGACATTTAAT+TGG - chr1.4:58531121-58531140 None:intergenic 15.0%
!! TCTCTCAAAAAAAAAAAAAA+AGG + chr1.4:58530713-58530732 MS.gene39949:intron 15.0%
!!! AATTTTGAATTATGTTATAC+TGG + chr1.4:58532152-58532171 MS.gene39949:CDS 15.0%
!!! ACTCTTTTTTAAAAACAAAA+TGG + chr1.4:58530837-58530856 MS.gene39949:intron 15.0%
!!! ATACTTTTAAATCTATGAAA+TGG + chr1.4:58531076-58531095 MS.gene39949:intron 15.0%
!!! ATTCTTTTAATTATATCATG+AGG + chr1.4:58531053-58531072 MS.gene39949:intron 15.0%
!!! ATTTCTAAAAGTGTATTATT+AGG - chr1.4:58530204-58530223 None:intergenic 15.0%
!!! CTCTTTTTTAAAAACAAAAT+GGG + chr1.4:58530838-58530857 MS.gene39949:intron 15.0%
!!! GACTAGTTTATATATTTTTT+TGG + chr1.4:58526740-58526759 MS.gene39949:intron 15.0%
!!! GCTTTTGTATAAAATTATAT+AGG - chr1.4:58530537-58530556 None:intergenic 15.0%
!!! TAATAATACACTTTTAGAAA+TGG + chr1.4:58530203-58530222 MS.gene39949:intron 15.0%
!!! TAGCAACAAAATATTTTTTA+TGG - chr1.4:58526697-58526716 None:intergenic 15.0%
!!! TCTTTTAAATGTAAATAAAG+AGG - chr1.4:58530565-58530584 None:intergenic 15.0%
!!! TTTTAAAAAAGAGTAGTATA+AGG - chr1.4:58530831-58530850 None:intergenic 15.0%
!! AATATGATAAGTATTCGATA+AGG - chr1.4:58531029-58531048 None:intergenic 20.0%
!! ATAAAAATGATAACTCTTTC+AGG + chr1.4:58531411-58531430 MS.gene39949:intron 20.0%
!! ATAAGAATACTCATTGAATA+TGG - chr1.4:58529663-58529682 None:intergenic 20.0%
!! ATAGGAATGAAAAGATTTAA+AGG - chr1.4:58532432-58532451 None:intergenic 20.0%
!! CATCAATAATATTTAAGGAA+AGG - chr1.4:58527960-58527979 None:intergenic 20.0%
!! CTAGATGTTTATAGAAATTA+TGG + chr1.4:58528745-58528764 MS.gene39949:intron 20.0%
!! CTTCATTGTAATAGTAATAT+GGG - chr1.4:58527496-58527515 None:intergenic 20.0%
!! GTCATTAAATACAAAACAAT+AGG + chr1.4:58530680-58530699 MS.gene39949:intron 20.0%
!! GTTTGCATATAAATATTTAC+AGG - chr1.4:58529265-58529284 None:intergenic 20.0%
!! TAAAAATGATAACTCTTTCA+GGG + chr1.4:58531412-58531431 MS.gene39949:intron 20.0%
!! TAAGAATACTCATTGAATAT+GGG - chr1.4:58529662-58529681 None:intergenic 20.0%
!! TATATGAAAGTTATTTGTAG+TGG + chr1.4:58530748-58530767 MS.gene39949:intron 20.0%
!! TCAAATAATTCAAATTCTCT+TGG - chr1.4:58530957-58530976 None:intergenic 20.0%
!! TCTTCATTGTAATAGTAATA+TGG - chr1.4:58527497-58527516 None:intergenic 20.0%
!! TCTTGAACAAAAAAAATACT+TGG + chr1.4:58527555-58527574 MS.gene39949:intron 20.0%
!! TGCAATTTGTGAAATTAAAA+AGG - chr1.4:58529758-58529777 None:intergenic 20.0%
!! TTATCTTATATACATGACAT+CGG + chr1.4:58529933-58529952 MS.gene39949:intron 20.0%
!! TTTCTGTATATTACAGAATT+TGG - chr1.4:58531875-58531894 None:intergenic 20.0%
!!! AATCTTTAGAATTAGAATTC+CGG - chr1.4:58531930-58531949 None:intergenic 20.0%
!!! ATATTTCTTTTTAACTCGTT+TGG + chr1.4:58526491-58526510 MS.gene39949:intron 20.0%
!!! ATTAATAGTCATTTTACAAC+CGG + chr1.4:58530929-58530948 MS.gene39949:intron 20.0%
!!! ATTAATGATCATTTTAGAAC+CGG + chr1.4:58530891-58530910 MS.gene39949:intron 20.0%
!!! CAATTAAATTTGTTATTTGC+CGG + chr1.4:58527835-58527854 MS.gene39949:intron 20.0%
!!! TAACATATTACTACTTTTGT+TGG + chr1.4:58529966-58529985 MS.gene39949:intron 20.0%
!!! TAATAATTTTCTCATAGAAC+CGG - chr1.4:58530913-58530932 None:intergenic 20.0%
!!! TAATGTGTTTTCTTATGTTT+AGG + chr1.4:58531781-58531800 MS.gene39949:intron 20.0%
!!! TAATTAGCAAGAAAAGTATA+TGG - chr1.4:58526920-58526939 None:intergenic 20.0%
!!! TAATTTTTTACTTTCCTTCA+AGG + chr1.4:58529496-58529515 MS.gene39949:intron 20.0%
!!! TTATTTTGCTAATTGGTAAT+TGG - chr1.4:58526799-58526818 None:intergenic 20.0%
!!! TTGGTTTTACTAAATGAAAT+AGG + chr1.4:58526204-58526223 MS.gene39949:intron 20.0%
! AAGACAGAATTAAAGATACA+GGG + chr1.4:58532124-58532143 MS.gene39949:CDS 25.0%
! AAGGAAAAAAGCAAATTTAC+AGG - chr1.4:58532005-58532024 None:intergenic 25.0%
! AGAATATATATATCCTAACC+AGG + chr1.4:58527384-58527403 MS.gene39949:intron 25.0%
! AGTGTATTATTAGGCAATAA+AGG - chr1.4:58530195-58530214 None:intergenic 25.0%
! AGTTTCATTTCATTCTTCTT+TGG - chr1.4:58530311-58530330 None:intergenic 25.0%
! ATAATAGCAATATGGGAAAA+AGG + chr1.4:58527359-58527378 MS.gene39949:intron 25.0%
! ATCGAAATAATTGTCAAATG+AGG - chr1.4:58530415-58530434 None:intergenic 25.0%
! ATGACATTTAATTGGAAGAA+AGG - chr1.4:58531113-58531132 None:intergenic 25.0%
! ATGATATGTTAGTATGTTAC+TGG + chr1.4:58527317-58527336 MS.gene39949:intron 25.0%
! ATTACCTAACACATATTCAT+TGG + chr1.4:58528538-58528557 MS.gene39949:intron 25.0%
! ATTCAAACTGGACATTAAAT+CGG + chr1.4:58526262-58526281 MS.gene39949:intron 25.0%
! ATTCAATGAGTATTCTTATC+TGG + chr1.4:58529664-58529683 MS.gene39949:intron 25.0%
! ATTTCATTCTTCTTTGGTTA+AGG - chr1.4:58530305-58530324 None:intergenic 25.0%
! CCATGCATCAATAATATTTA+AGG - chr1.4:58527965-58527984 None:intergenic 25.0%
! CCTTAAATATTATTGATGCA+TGG + chr1.4:58527962-58527981 MS.gene39949:intron 25.0%
! CGGCAAATAACAAATTTAAT+TGG - chr1.4:58527837-58527856 None:intergenic 25.0%
! CTAGCATAATAATTAATGCA+AGG - chr1.4:58528724-58528743 None:intergenic 25.0%
! GTAATACTGATGTTAAGATT+TGG - chr1.4:58531358-58531377 None:intergenic 25.0%
! TACTTCATAGACTTCAAAAA+TGG - chr1.4:58525887-58525906 None:intergenic 25.0%
! TAGAAAAATGATTCATTTGC+AGG - chr1.4:58529695-58529714 None:intergenic 25.0%
! TATGGCAATTAATCAAAACA+TGG + chr1.4:58532205-58532224 MS.gene39949:intron 25.0%
! TATTTATTTGGTTATTGCAG+TGG + chr1.4:58528446-58528465 MS.gene39949:intron 25.0%
! TCAACTAAATTAGCATATCT+AGG - chr1.4:58531152-58531171 None:intergenic 25.0%
! TCTAGATAAATAGCAACATT+CGG - chr1.4:58527777-58527796 None:intergenic 25.0%
! TGAGGCAATAACTTTATTAT+TGG + chr1.4:58530342-58530361 MS.gene39949:intron 25.0%
! TTTATATGCAAACAACAAGT+TGG + chr1.4:58529272-58529291 MS.gene39949:intron 25.0%
!! AACTTGCAGTGTAATTTTAT+TGG + chr1.4:58532247-58532266 MS.gene39949:intron 25.0%
!! ATGTGTTTTCAAATTCAAAC+TGG + chr1.4:58526250-58526269 MS.gene39949:intron 25.0%
!! GAAAAGTATATGGAAGAAAA+TGG - chr1.4:58526910-58526929 None:intergenic 25.0%
!! TAGTTGATGTAGATTTCAAT+AGG + chr1.4:58531165-58531184 MS.gene39949:intron 25.0%
!! TTAGTCAGTCCTAAAATTTT+TGG - chr1.4:58526634-58526653 None:intergenic 25.0%
!!! ACAAGTTGGTTTGATTTAAT+CGG + chr1.4:58529286-58529305 MS.gene39949:intron 25.0%
!!! ATTTTTTCCCCATATTTGAA+TGG + chr1.4:58525996-58526015 MS.gene39949:CDS 25.0%
!!! ATTTTTTTGGGACATTGATA+TGG + chr1.4:58526753-58526772 MS.gene39949:intron 25.0%
!!! TTTTTTCCCCATATTTGAAT+GGG + chr1.4:58525997-58526016 MS.gene39949:CDS 25.0%
AAATCTTGTAGTAACAGCTA+TGG - chr1.4:58530792-58530811 None:intergenic 30.0%
AACAAAGAGATGATAGCTAT+TGG + chr1.4:58531272-58531291 MS.gene39949:CDS 30.0%
AACAAGACAACACAAAAAGA+AGG - chr1.4:58527423-58527442 None:intergenic 30.0%
AATGAGTATTCTTATCTGGT+AGG + chr1.4:58529668-58529687 MS.gene39949:intron 30.0%
ACAAGACAACACAAAAAGAA+GGG - chr1.4:58527422-58527441 None:intergenic 30.0%
ACAAGTTATAATAACGCATG+AGG + chr1.4:58527992-58528011 MS.gene39949:intron 30.0%
ACCGTTAATTTATGCAATGA+TGG + chr1.4:58527039-58527058 MS.gene39949:CDS 30.0%
AGACAGAATTAAAGATACAG+GGG + chr1.4:58532125-58532144 MS.gene39949:CDS 30.0%
AGGAAACTGTTATTGTTCAT+AGG + chr1.4:58532076-58532095 MS.gene39949:intron 30.0%
AGTTTGACCTTGTAATATCA+AGG - chr1.4:58530988-58531007 None:intergenic 30.0%
ATAAATAGCAACATTCGGAA+AGG - chr1.4:58527772-58527791 None:intergenic 30.0%
ATAATTGTATCTGCAATGCT+TGG + chr1.4:58531576-58531595 MS.gene39949:CDS 30.0%
ATAGACTTCAAAAATGGTTG+AGG - chr1.4:58525881-58525900 None:intergenic 30.0%
ATCATTGCATAAATTAACGG+TGG - chr1.4:58527040-58527059 None:intergenic 30.0%
CCCATCATTGCATAAATTAA+CGG - chr1.4:58527043-58527062 None:intergenic 30.0%
CCGTTAATTTATGCAATGAT+GGG + chr1.4:58527040-58527059 MS.gene39949:CDS 30.0%
GAAATAATTGTCAAATGAGG+AGG - chr1.4:58530412-58530431 None:intergenic 30.0%
GAAGACAGAATTAAAGATAC+AGG + chr1.4:58532123-58532142 MS.gene39949:CDS 30.0%
GAATGAAATGAAACTAGACA+AGG + chr1.4:58530316-58530335 MS.gene39949:intron 30.0%
GAGAAATAAGTGACAGATTT+GGG - chr1.4:58528702-58528721 None:intergenic 30.0%
GATTAATTGCCATATCTCAA+AGG - chr1.4:58532199-58532218 None:intergenic 30.0%
GGCAATAACTTTATTATTGG+TGG + chr1.4:58530345-58530364 MS.gene39949:intron 30.0%
GTTGGAAATATTGATACAAG+TGG + chr1.4:58532275-58532294 MS.gene39949:CDS 30.0%
GTTTGACCTTGTAATATCAA+GGG - chr1.4:58530987-58531006 None:intergenic 30.0%
TAAAATAGGTTTGACTAAGC+CGG - chr1.4:58528339-58528358 None:intergenic 30.0%
TAAATAGCAACATTCGGAAA+GGG - chr1.4:58527771-58527790 None:intergenic 30.0%
TATGCCAATGAATATGTGTT+AGG - chr1.4:58528545-58528564 None:intergenic 30.0%
TATGTTATACTGGATATGAG+TGG + chr1.4:58532162-58532181 MS.gene39949:CDS 30.0%
TCTGAATTAAGGCATATACT+TGG + chr1.4:58527527-58527546 MS.gene39949:intron 30.0%
TGGTATTGTAATTGCCAAAT+TGG + chr1.4:58530008-58530027 MS.gene39949:intron 30.0%
TGTTAGTATGTTACTGGATA+TGG + chr1.4:58527323-58527342 MS.gene39949:intron 30.0%
TTATGACCTCATATAAACCT+TGG - chr1.4:58530633-58530652 None:intergenic 30.0%
TTATTGTTCATAGGATCTCA+AGG + chr1.4:58532085-58532104 MS.gene39949:intron 30.0%
TTCAATAGGATCTTGAATGT+TGG + chr1.4:58531179-58531198 MS.gene39949:intron 30.0%
TTGAATTGTGACTAGATGAA+TGG - chr1.4:58526368-58526387 None:intergenic 30.0%
TTTCATCCCTTGATATTACA+AGG + chr1.4:58530978-58530997 MS.gene39949:intron 30.0%
TTTGTCAAATGCTCATCATA+TGG + chr1.4:58530379-58530398 MS.gene39949:intron 30.0%
! AAGCATTGCAGATACAATTA+TGG - chr1.4:58531577-58531596 None:intergenic 30.0%
! AAGTCAACAAATTTTCTCAG+CGG + chr1.4:58528840-58528859 MS.gene39949:intron 30.0%
! ATTCTTTTAGCAAGTGTGAT+TGG + chr1.4:58527686-58527705 MS.gene39949:intron 30.0%
! CTTGCTGTGTAAATATCATT+TGG - chr1.4:58528648-58528667 None:intergenic 30.0%
! GAGAAAAAGCTTAGGATTTT+GGG - chr1.4:58527149-58527168 None:intergenic 30.0%
! TTACGAAGTATCTTGTAACA+AGG - chr1.4:58528516-58528535 None:intergenic 30.0%
! TTTTTCTACCTGATGAGTTT+GGG - chr1.4:58528186-58528205 None:intergenic 30.0%
!! ACAACTTTATTGATTCGTCT+CGG + chr1.4:58526605-58526624 MS.gene39949:intron 30.0%
!! ATAAAAGAGTTTGAGTTGAG+AGG - chr1.4:58530170-58530189 None:intergenic 30.0%
!!! TTGGTATAGACTCTTTTTTG+AGG - chr1.4:58526780-58526799 None:intergenic 30.0%
AAAAGGATGTAGGAGGAAAT+TGG + chr1.4:58532518-58532537 MS.gene39949:CDS 35.0%
AAACACTGTTGAGTGCTATA+GGG + chr1.4:58529622-58529641 MS.gene39949:intron 35.0%
AAATGCTCATCATATGGACA+TGG + chr1.4:58530385-58530404 MS.gene39949:intron 35.0%
AAATTGGATCTATCTGACAG+TGG + chr1.4:58532534-58532553 MS.gene39949:CDS 35.0%
AACTCACATAGTCCAAGAAT+TGG - chr1.4:58526133-58526152 None:intergenic 35.0%
AATACCAAATCTGTGAGTGA+TGG - chr1.4:58530076-58530095 None:intergenic 35.0%
AATTCAAATTCTCTTGGAGC+CGG - chr1.4:58530951-58530970 None:intergenic 35.0%
AATTGGCACATGTTTCAGAT+AGG + chr1.4:58530025-58530044 MS.gene39949:intron 35.0%
ACATGTAACATGTGTACTCA+TGG - chr1.4:58529725-58529744 None:intergenic 35.0%
ACTTGAAATTGGAACTGCAA+CGG + chr1.4:58528994-58529013 MS.gene39949:intron 35.0%
AGATAATGCCCTAGAACTAT+TGG - chr1.4:58530503-58530522 None:intergenic 35.0%
AGTTATAATAACGCATGAGG+TGG + chr1.4:58527995-58528014 MS.gene39949:intron 35.0%
ATGCAAGCTATTTAAGAGAG+AGG + chr1.4:58531972-58531991 MS.gene39949:CDS 35.0%
ATTCAACTATAGTAAGCCTC+AGG + chr1.4:58526382-58526401 MS.gene39949:intron 35.0%
ATTGGAACCATGAACATAGT+TGG + chr1.4:58531290-58531309 MS.gene39949:CDS 35.0%
ATTTGTCAATCTTCCAGAGA+TGG - chr1.4:58531626-58531645 None:intergenic 35.0%
CACATGCTAGAGAAAGAAAA+AGG - chr1.4:58532024-58532043 None:intergenic 35.0%
CAGATAGGAGAATTGAAGAA+AGG + chr1.4:58530040-58530059 MS.gene39949:intron 35.0%
CATGATTAGATCATCCTTGA+AGG - chr1.4:58529513-58529532 None:intergenic 35.0%
CCAAAACAAGCTGTAATCAT+AGG - chr1.4:58532450-58532469 None:intergenic 35.0%
CTGATGAGTTTGGGTAAAAA+TGG - chr1.4:58528177-58528196 None:intergenic 35.0%
CTGGAATAATTTGACACACA+AGG + chr1.4:58532056-58532075 MS.gene39949:intron 35.0%
CTTATATACATGACATCGGA+AGG + chr1.4:58529937-58529956 MS.gene39949:intron 35.0%
CTTGTGTGTCAAATTATTCC+AGG - chr1.4:58532058-58532077 None:intergenic 35.0%
GAAAGAACCAACTATGTTCA+TGG - chr1.4:58531300-58531319 None:intergenic 35.0%
GAATACTCATTGAATATGGG+TGG - chr1.4:58529659-58529678 None:intergenic 35.0%
GAGCTATAATGCCAACAATA+AGG - chr1.4:58530135-58530154 None:intergenic 35.0%
GCTTGAAGAGACTAAAAAGA+TGG + chr1.4:58532307-58532326 MS.gene39949:CDS 35.0%
GGAGAAATAAGTGACAGATT+TGG - chr1.4:58528703-58528722 None:intergenic 35.0%
GTTATAATAACGCATGAGGT+GGG + chr1.4:58527996-58528015 MS.gene39949:intron 35.0%
TAGTAATATGGGATGCGAAA+TGG - chr1.4:58527485-58527504 None:intergenic 35.0%
TATATAGCAGACTGAGAAGT+GGG - chr1.4:58531749-58531768 None:intergenic 35.0%
TATGATGATTACCCATGTTC+AGG + chr1.4:58525812-58525831 MS.gene39949:CDS 35.0%
TCATTGAATATGGGTGGTAT+CGG - chr1.4:58529653-58529672 None:intergenic 35.0%
TGACCTTTACCAATAGTTCT+AGG + chr1.4:58530491-58530510 MS.gene39949:intron 35.0%
TGATTCTTAAACCTCCTCAA+TGG - chr1.4:58525941-58525960 None:intergenic 35.0%
TGCAATTGACATCACAATGT+TGG - chr1.4:58531490-58531509 None:intergenic 35.0%
TTATAATAACGCATGAGGTG+GGG + chr1.4:58527997-58528016 MS.gene39949:intron 35.0%
TTATATAGCAGACTGAGAAG+TGG - chr1.4:58531750-58531769 None:intergenic 35.0%
TTATTTGGTTATTGCAGTGG+AGG + chr1.4:58528449-58528468 MS.gene39949:intron 35.0%
TTCAACTATAGTAAGCCTCA+GGG + chr1.4:58526383-58526402 MS.gene39949:intron 35.0%
TTGAAATCTGATCTCATAGC+TGG + chr1.4:58526043-58526062 MS.gene39949:CDS 35.0%
TTTCCCAAAACAAATGTCCT+TGG - chr1.4:58531848-58531867 None:intergenic 35.0%
TTTGTTCTATTACACTCCTC+TGG + chr1.4:58531539-58531558 MS.gene39949:CDS 35.0%
! AAGAACTGAAAAGTGTAGCT+TGG - chr1.4:58526025-58526044 None:intergenic 35.0%
! AATTTCCTCCTACATCCTTT+TGG - chr1.4:58532519-58532538 None:intergenic 35.0%
! AGAGGAGTGTAATAGAACAA+AGG - chr1.4:58531540-58531559 None:intergenic 35.0%
! ATCTGAAACATGTGCCAATT+TGG - chr1.4:58530025-58530044 None:intergenic 35.0%
! CATTTTTACCCAAACTCATC+AGG + chr1.4:58528175-58528194 MS.gene39949:CDS 35.0%
! CTCTAGCATGTGAAATTTTC+TGG + chr1.4:58532032-58532051 MS.gene39949:intron 35.0%
! CTCTCTTAAATAGCTTGCAT+TGG - chr1.4:58531972-58531991 None:intergenic 35.0%
! CTCTTCAACTTTGAGAAACT+TGG - chr1.4:58528284-58528303 None:intergenic 35.0%
! CTTGCATTGGCAAAGTAAAT+TGG - chr1.4:58531959-58531978 None:intergenic 35.0%
! GACCTTTACCAATAGTTCTA+GGG + chr1.4:58530492-58530511 MS.gene39949:intron 35.0%
! GGAGAAAAAGCTTAGGATTT+TGG - chr1.4:58527150-58527169 None:intergenic 35.0%
! GGTTACTACTATTTGTTGCA+AGG + chr1.4:58531822-58531841 MS.gene39949:CDS 35.0%
! GTAATTTTATTGGCAGCTGT+TGG + chr1.4:58532257-58532276 MS.gene39949:intron 35.0%
! GTTTTTCTACCTGATGAGTT+TGG - chr1.4:58528187-58528206 None:intergenic 35.0%
! TCAAACCTATTTCTCTAGAG+CGG + chr1.4:58528249-58528268 MS.gene39949:intron 35.0%
! TCAACCAGCTTCTAAAAAGT+TGG + chr1.4:58525958-58525977 MS.gene39949:CDS 35.0%
! TGTTATTTGCCGGAAATCAA+GGG + chr1.4:58527845-58527864 MS.gene39949:intron 35.0%
! TTGATAGCTGTGGTCATATA+TGG - chr1.4:58530106-58530125 None:intergenic 35.0%
!! AAAAGCTTAGGATTTTGGGT+AGG - chr1.4:58527145-58527164 None:intergenic 35.0%
!! AGTAATGAGCCTTTGAGATA+TGG + chr1.4:58532187-58532206 MS.gene39949:intron 35.0%
!! ATCAAAACTGGCCTTATTGT+TGG + chr1.4:58530121-58530140 MS.gene39949:CDS 35.0%
!! CAACTTTATTGATTCGTCTC+GGG + chr1.4:58526606-58526625 MS.gene39949:intron 35.0%
!! CCTATGATTACAGCTTGTTT+TGG + chr1.4:58532447-58532466 MS.gene39949:intron 35.0%
!! TTGTTATTTGCCGGAAATCA+AGG + chr1.4:58527844-58527863 MS.gene39949:intron 35.0%
AAAGAGATGAATCAGAGGGT+TGG + chr1.4:58532602-58532621 MS.gene39949:CDS 40.0%
AAGCTTCATTGGGTCTCTTT+AGG + chr1.4:58527209-58527228 MS.gene39949:CDS 40.0%
AATGGACGAATCTCATTGCA+TGG - chr1.4:58527467-58527486 None:intergenic 40.0%
ACCTCATATAAACCTTGGCA+AGG - chr1.4:58530628-58530647 None:intergenic 40.0%
ACCTTGCCAAGGTTTATATG+AGG + chr1.4:58530624-58530643 MS.gene39949:intron 40.0%
AGAATGTAGCTGTGAAAGCA+AGG - chr1.4:58527174-58527193 None:intergenic 40.0%
AGGTTGCAATATCAGTGCTT+CGG + chr1.4:58531801-58531820 MS.gene39949:intron 40.0%
ATAGTCCAAGAATTGGAGGA+AGG - chr1.4:58526126-58526145 None:intergenic 40.0%
ATGACCACAGCTATCAAAAC+TGG + chr1.4:58530109-58530128 MS.gene39949:CDS 40.0%
ATTAACCTCATTGGCCAACA+TGG - chr1.4:58527122-58527141 None:intergenic 40.0%
CAAACACTGTTGAGTGCTAT+AGG + chr1.4:58529621-58529640 MS.gene39949:intron 40.0%
CAACAAATCCAGCTTCCAAA+AGG + chr1.4:58532501-58532520 MS.gene39949:CDS 40.0%
CAACGTTCATTCCTGAACAT+GGG - chr1.4:58525826-58525845 None:intergenic 40.0%
CAGCAGCTGAAATCAATTCT+AGG + chr1.4:58528104-58528123 MS.gene39949:CDS 40.0%
CCCAAAAGAGATGAATCAGA+GGG + chr1.4:58532598-58532617 MS.gene39949:CDS 40.0%
CTATAGCACTCAACAGTGTT+TGG - chr1.4:58529623-58529642 None:intergenic 40.0%
CTTATCAAGAGTAGCAGCTA+GGG - chr1.4:58528812-58528831 None:intergenic 40.0%
GACTTCAAAAATGGTTGAGG+AGG - chr1.4:58525878-58525897 None:intergenic 40.0%
GATGATGTTTACCAGTTGTG+AGG - chr1.4:58531334-58531353 None:intergenic 40.0%
GCAAGATATCTATCCTGGTT+AGG - chr1.4:58527400-58527419 None:intergenic 40.0%
GCATCCAGCATTATAGTTCA+CGG - chr1.4:58531454-58531473 None:intergenic 40.0%
GGTAAAAATGGATCGCATGA+CGG - chr1.4:58528165-58528184 None:intergenic 40.0%
GGTGGTATAAAGCTTGAATC+TGG - chr1.4:58527022-58527041 None:intergenic 40.0%
GTAACATGTGTACTCATGGT+GGG - chr1.4:58529721-58529740 None:intergenic 40.0%
GTCTGCATTAGCGCATATAT+GGG + chr1.4:58531657-58531676 MS.gene39949:CDS 40.0%
GTGTTAGCAAATACACTGTC+TGG + chr1.4:58527894-58527913 MS.gene39949:intron 40.0%
TCAACGTTCATTCCTGAACA+TGG - chr1.4:58525827-58525846 None:intergenic 40.0%
TCAACTATAGTAAGCCTCAG+GGG + chr1.4:58526384-58526403 MS.gene39949:intron 40.0%
TCACATAGTCCAAGAATTGG+AGG - chr1.4:58526130-58526149 None:intergenic 40.0%
TCCCAAAAGAGATGAATCAG+AGG + chr1.4:58532597-58532616 MS.gene39949:CDS 40.0%
TCCTTTCACAGTCATAGTCA+TGG - chr1.4:58528673-58528692 None:intergenic 40.0%
TCTTATCAAGAGTAGCAGCT+AGG - chr1.4:58528813-58528832 None:intergenic 40.0%
TCTTTCCAGATGATCCATTG+AGG + chr1.4:58525924-58525943 MS.gene39949:CDS 40.0%
TGACTAGATGAATGGTGAAC+TGG - chr1.4:58526360-58526379 None:intergenic 40.0%
TGCCCTAGAACTATTGGTAA+AGG - chr1.4:58530497-58530516 None:intergenic 40.0%
TGTAACATGTGTACTCATGG+TGG - chr1.4:58529722-58529741 None:intergenic 40.0%
TGTTGGCATTATAGCTCTTG+CGG + chr1.4:58530138-58530157 MS.gene39949:CDS 40.0%
TTCAAAAATGGTTGAGGAGG+TGG - chr1.4:58525875-58525894 None:intergenic 40.0%
TTCACAGCTACATTCTTTGC+TGG + chr1.4:58527178-58527197 MS.gene39949:CDS 40.0%
TTGGGTAGGATTAACCTCAT+TGG - chr1.4:58527131-58527150 None:intergenic 40.0%
TTGGTAAAGGTCATGTGATC+TGG - chr1.4:58530484-58530503 None:intergenic 40.0%
TTGTTCATAGGATCTCAAGG+TGG + chr1.4:58532088-58532107 MS.gene39949:intron 40.0%
TTTCAGGAAGGAATAGCTGT+GGG + chr1.4:58531209-58531228 MS.gene39949:intron 40.0%
! AAGGCCAAGGACATTTGTTT+TGG + chr1.4:58531841-58531860 MS.gene39949:CDS 40.0%
! ACCCTCTGATTCATCTCTTT+TGG - chr1.4:58532602-58532621 None:intergenic 40.0%
! AGAAACAACCGAGGTTCTTT+TGG + chr1.4:58529050-58529069 MS.gene39949:CDS 40.0%
! CCCTCTGATTCATCTCTTTT+GGG - chr1.4:58532601-58532620 None:intergenic 40.0%
! GAAACAACCGAGGTTCTTTT+GGG + chr1.4:58529051-58529070 MS.gene39949:CDS 40.0%
! GGACTTTTGCAAGCTTCATT+GGG + chr1.4:58527199-58527218 MS.gene39949:CDS 40.0%
! GTCTTTGGCAGTGTTGAAAT+TGG + chr1.4:58531684-58531703 MS.gene39949:CDS 40.0%
! TACTATTTGTTGCAAGGCCA+AGG + chr1.4:58531828-58531847 MS.gene39949:CDS 40.0%
! TCTCGGGCACCAAAAATTTT+AGG + chr1.4:58526622-58526641 MS.gene39949:intron 40.0%
! TGGACTTTTGCAAGCTTCAT+TGG + chr1.4:58527198-58527217 MS.gene39949:CDS 40.0%
! TTGGTGCCCATTCAAATATG+GGG - chr1.4:58526006-58526025 None:intergenic 40.0%
!! AAACCTATTTCTCTAGAGCG+GGG + chr1.4:58528251-58528270 MS.gene39949:intron 40.0%
!! AGCACCAACTTTTTAGAAGC+TGG - chr1.4:58525965-58525984 None:intergenic 40.0%
!! AGGCCAAGGACATTTGTTTT+GGG + chr1.4:58531842-58531861 MS.gene39949:CDS 40.0%
!! ATGCAATGATGGGTAGTTCA+AGG + chr1.4:58527050-58527069 MS.gene39949:CDS 40.0%
!! CAAACCTATTTCTCTAGAGC+GGG + chr1.4:58528250-58528269 MS.gene39949:intron 40.0%
!! CTTGGTGCCCATTCAAATAT+GGG - chr1.4:58526007-58526026 None:intergenic 40.0%
!! GCTTCTAAAAAGTTGGTGCT+TGG + chr1.4:58525965-58525984 MS.gene39949:CDS 40.0%
!! TGAAACTAGACAAGGCATTG+AGG + chr1.4:58530324-58530343 MS.gene39949:intron 40.0%
!! TGCAATGATGGGTAGTTCAA+GGG + chr1.4:58527051-58527070 MS.gene39949:CDS 40.0%
!! TTTTCAGGAAGGAATAGCTG+TGG + chr1.4:58531208-58531227 MS.gene39949:intron 40.0%
!!! CTACGTAGCTACTTTTGTCA+TGG - chr1.4:58528891-58528910 None:intergenic 40.0%
!!! GAATGTTGGTGCTGTTTTTC+AGG + chr1.4:58531193-58531212 MS.gene39949:intron 40.0%
AACCTCCTCAATGGATCATC+TGG - chr1.4:58525932-58525951 None:intergenic 45.0%
ACCAAATCTGTGAGTGATGG+CGG - chr1.4:58530073-58530092 None:intergenic 45.0%
AGCTTCCAAAAGGATGTAGG+AGG + chr1.4:58532511-58532530 MS.gene39949:CDS 45.0%
AGTTCAAGGGATTTGGCAGT+TGG + chr1.4:58527064-58527083 MS.gene39949:CDS 45.0%
ATGTAGCTGTGAAAGCAAGG+TGG - chr1.4:58527171-58527190 None:intergenic 45.0%
CAGCACACTTCCCAGTATAA+CGG - chr1.4:58529101-58529120 None:intergenic 45.0%
CCATTACCTCCCTTGATTTC+CGG - chr1.4:58527857-58527876 None:intergenic 45.0%
CCGAATGCAAATCGTGTTTC+CGG + chr1.4:58531908-58531927 MS.gene39949:CDS 45.0%
CCGGAAACACGATTTGCATT+CGG - chr1.4:58531911-58531930 None:intergenic 45.0%
CGTCTGCATTAGCGCATATA+TGG + chr1.4:58531656-58531675 MS.gene39949:CDS 45.0%
CTCTCAATCAAGCGATCTCT+TGG + chr1.4:58528309-58528328 MS.gene39949:intron 45.0%
GAAGGGCAAGATATCTATCC+TGG - chr1.4:58527405-58527424 None:intergenic 45.0%
GATGGGTAGTTCAAGGGATT+TGG + chr1.4:58527057-58527076 MS.gene39949:CDS 45.0%
GCAAGGTGGAGAAAAAGCTT+AGG - chr1.4:58527157-58527176 None:intergenic 45.0%
GCAGTTGGATCTCTTCTGAT+GGG + chr1.4:58527094-58527113 MS.gene39949:CDS 45.0%
GCCATGACTATGACTGTGAA+AGG + chr1.4:58528669-58528688 MS.gene39949:intron 45.0%
GGATACGATATCAGCAGCAT+GGG - chr1.4:58528144-58528163 None:intergenic 45.0%
GTCAATCTTCCAGAGATGGA+TGG - chr1.4:58531622-58531641 None:intergenic 45.0%
GTTCTATTACACTCCTCTGG+TGG + chr1.4:58531542-58531561 MS.gene39949:CDS 45.0%
TATTTGCCGGAAATCAAGGG+AGG + chr1.4:58527848-58527867 MS.gene39949:intron 45.0%
TCCAAGAATTGGAGGAAGGT+TGG - chr1.4:58526122-58526141 None:intergenic 45.0%
TCCAGCTTCCAAAAGGATGT+AGG + chr1.4:58532508-58532527 MS.gene39949:CDS 45.0%
TGAAATTGGAACTGCAACGG+TGG + chr1.4:58528997-58529016 MS.gene39949:intron 45.0%
TGGCATCACTATTGCTAGCT+TGG + chr1.4:58526063-58526082 MS.gene39949:CDS 45.0%
TGTCACATGCAGCCATAGTA+GGG + chr1.4:58528048-58528067 MS.gene39949:CDS 45.0%
TTCCAGATGATCCATTGAGG+AGG + chr1.4:58525927-58525946 MS.gene39949:CDS 45.0%
TTCTTCATCACCTCACTTCC+AGG - chr1.4:58532478-58532497 None:intergenic 45.0%
TTGGCATAGCTAATGCCTTG+AGG - chr1.4:58526094-58526113 None:intergenic 45.0%
TTGGTTATTGCAGTGGAGGT+GGG + chr1.4:58528453-58528472 MS.gene39949:intron 45.0%
TTTGGTCAATCCTGGAAGTG+AGG + chr1.4:58532465-58532484 MS.gene39949:CDS 45.0%
TTTGGTTATTGCAGTGGAGG+TGG + chr1.4:58528452-58528471 MS.gene39949:intron 45.0%
! AACGTTGATGAGAGTGTGCA+TGG + chr1.4:58525839-58525858 MS.gene39949:CDS 45.0%
! GCATATATGGGCGTTGTCTT+TGG + chr1.4:58531669-58531688 MS.gene39949:CDS 45.0%
!! AAGGCCAGTTTTGATAGCTG+TGG - chr1.4:58530116-58530135 None:intergenic 45.0%
!! GCATGTGAAATTTTCTGGCC+TGG + chr1.4:58532037-58532056 MS.gene39949:intron 45.0%
!! GCTTGGTGCCCATTCAAATA+TGG - chr1.4:58526008-58526027 None:intergenic 45.0%
!! TCCTACATCCTTTTGGAAGC+TGG - chr1.4:58532512-58532531 None:intergenic 45.0%
!! TCTTCTGATGGGTTCCATGT+TGG + chr1.4:58527105-58527124 MS.gene39949:CDS 45.0%
!! TGAATATGGGTGGTATCGGT+TGG - chr1.4:58529649-58529668 None:intergenic 45.0%
!!! CAGCTTGTTTTGGTCAATCC+TGG + chr1.4:58532457-58532476 MS.gene39949:intron 45.0%
!!! GTTGGTGCTGTTTTTCAGGA+AGG + chr1.4:58531197-58531216 MS.gene39949:intron 45.0%
!! TTATTAAAAATTACTAAAAA+TGG + chr1.4:58526853-58526872 MS.gene39949:intron 5.0%
!!! AAAATTTTTGTTTATTTATT+TGG + chr1.4:58528434-58528453 MS.gene39949:intron 5.0%
!!! TAAATAAACAAAAATTTTAT+TGG - chr1.4:58528432-58528451 None:intergenic 5.0%
ACCAGTTGTGAGGTAGCAAG+AGG - chr1.4:58531324-58531343 None:intergenic 50.0%
ACCTCTTGCTACCTCACAAC+TGG + chr1.4:58531320-58531339 MS.gene39949:CDS 50.0%
ACTATAGTAAGCCTCAGGGG+TGG + chr1.4:58526387-58526406 MS.gene39949:intron 50.0%
ATGAAGCAGCCATCCATCTC+TGG + chr1.4:58531610-58531629 MS.gene39949:CDS 50.0%
CAAGAGTAGCAGCTAGGGTA+GGG - chr1.4:58528807-58528826 None:intergenic 50.0%
CAAGCGATCTCTTGGAAGAC+CGG + chr1.4:58528317-58528336 MS.gene39949:intron 50.0%
CCGGAAATCAAGGGAGGTAA+TGG + chr1.4:58527854-58527873 MS.gene39949:intron 50.0%
CGGATACGATATCAGCAGCA+TGG - chr1.4:58528145-58528164 None:intergenic 50.0%
CTACTATGGCTGCATGTGAC+AGG - chr1.4:58528049-58528068 None:intergenic 50.0%
CTCAAGGTGGATCGATGAAG+AGG + chr1.4:58532101-58532120 MS.gene39949:CDS 50.0%
CTGTCACATGCAGCCATAGT+AGG + chr1.4:58528047-58528066 MS.gene39949:CDS 50.0%
GCAGCCATAGTAGGGTTCAT+GGG + chr1.4:58528056-58528075 MS.gene39949:CDS 50.0%
GCCAACCTTCCTCCAATTCT+TGG + chr1.4:58526118-58526137 MS.gene39949:CDS 50.0%
GCTGACACCCAAAAGAACCT+CGG - chr1.4:58529061-58529080 None:intergenic 50.0%
GGATTTGGCAGTTGGAACTG+TGG + chr1.4:58527072-58527091 MS.gene39949:CDS 50.0%
GGCAGTTGGATCTCTTCTGA+TGG + chr1.4:58527093-58527112 MS.gene39949:CDS 50.0%
GTGCAGGTTAGGGTTTATCG+TGG + chr1.4:58528019-58528038 MS.gene39949:intron 50.0%
TCAAGAGTAGCAGCTAGGGT+AGG - chr1.4:58528808-58528827 None:intergenic 50.0%
TCCGCCATCACTCACAGATT+TGG + chr1.4:58530069-58530088 MS.gene39949:CDS 50.0%
TCCTCCCATGAACCCTACTA+TGG - chr1.4:58528063-58528082 None:intergenic 50.0%
TCGGCCGTGAACTATAATGC+TGG + chr1.4:58531447-58531466 MS.gene39949:CDS 50.0%
TGCAGAGCAAGAAACAACCG+AGG + chr1.4:58529041-58529060 MS.gene39949:intron 50.0%
TGCAGCCATAGTAGGGTTCA+TGG + chr1.4:58528055-58528074 MS.gene39949:CDS 50.0%
TGGAGGAAGGTTGGCAAGTT+TGG - chr1.4:58526113-58526132 None:intergenic 50.0%
! CGTTATACTGGGAAGTGTGC+TGG + chr1.4:58529099-58529118 MS.gene39949:CDS 50.0%
! GCTAGCTTGGCTATTCCTCA+AGG + chr1.4:58526076-58526095 MS.gene39949:CDS 50.0%
! TGATGAGAGTGTGCATGGTG+TGG + chr1.4:58525844-58525863 MS.gene39949:CDS 50.0%
!! AGACCCCGCTCTAGAGAAAT+AGG - chr1.4:58528257-58528276 None:intergenic 50.0%
!! GCAAGCTTGTTACCTTGCCA+AGG + chr1.4:58530613-58530632 MS.gene39949:intron 50.0%
!! TTCAGGGCCATTTTCGCGTT+CGG + chr1.4:58531428-58531447 MS.gene39949:intron 50.0%
!!! TTTTGGTGCCCCTACAAACG+CGG - chr1.4:58526437-58526456 None:intergenic 50.0%
ATGAGGTGGGGTGCAGGTTA+GGG + chr1.4:58528009-58528028 MS.gene39949:intron 55.0%
ATGGCTGCTAGTACCACCAG+AGG - chr1.4:58531558-58531577 None:intergenic 55.0%
CACTTGAACACCGTGGTGCT+CGG - chr1.4:58529140-58529159 None:intergenic 55.0%
CCGTTGGCGTCCGTTATACT+GGG + chr1.4:58529088-58529107 MS.gene39949:CDS 55.0%
GCAGTTGGAACTGTGGCAGT+TGG + chr1.4:58527079-58527098 MS.gene39949:CDS 55.0%
GCCATAGTAGGGTTCATGGG+AGG + chr1.4:58528059-58528078 MS.gene39949:CDS 55.0%
GGGTTCCATGTTGGCCAATG+AGG + chr1.4:58527114-58527133 MS.gene39949:CDS 55.0%
TGCTCACCACTTGAACACCG+TGG - chr1.4:58529147-58529166 None:intergenic 55.0%
TTCACGGCCGAACGCGAAAA+TGG - chr1.4:58531438-58531457 None:intergenic 55.0%
!! AGGTGGGAAAGCGCTGTGTT+GGG + chr1.4:58528469-58528488 MS.gene39949:CDS 55.0%
!! CCCAGTATAACGGACGCCAA+CGG - chr1.4:58529091-58529110 None:intergenic 55.0%
CATGAGGTGGGGTGCAGGTT+AGG + chr1.4:58528008-58528027 MS.gene39949:intron 60.0%
CATGGGAGGAGCAGCTACAG+TGG + chr1.4:58528073-58528092 MS.gene39949:CDS 60.0%
CGAGCACCACGGTGTTCAAG+TGG + chr1.4:58529138-58529157 MS.gene39949:CDS 60.0%
GCCGTTGGCGTCCGTTATAC+TGG + chr1.4:58529087-58529106 MS.gene39949:CDS 60.0%
GGTGTCAGCAATGACGCCGT+TGG + chr1.4:58529072-58529091 MS.gene39949:CDS 60.0%
TAACGCATGAGGTGGGGTGC+AGG + chr1.4:58528003-58528022 MS.gene39949:intron 60.0%
TAGTAAGCCTCAGGGGTGGC+CGG + chr1.4:58526391-58526410 MS.gene39949:intron 60.0%
TTCACTCACGCCGAGCACCA+CGG + chr1.4:58529127-58529146 MS.gene39949:CDS 60.0%
!! GAGGTGGGAAAGCGCTGTGT+TGG + chr1.4:58528468-58528487 MS.gene39949:CDS 60.0%
!! TCCAGGGCACCGCGTTTGTA+GGG + chr1.4:58526425-58526444 MS.gene39949:intron 60.0%
!! CCAGGGCACCGCGTTTGTAG+GGG + chr1.4:58526426-58526445 MS.gene39949:intron 65.0%
!! GTCCAGGGCACCGCGTTTGT+AGG + chr1.4:58526424-58526443 MS.gene39949:intron 65.0%
AAGCCTCAGGGGTGGCCGGA+GGG + chr1.4:58526395-58526414 MS.gene39949:intron 70.0%
CCCCTACAAACGCGGTGCCC+TGG - chr1.4:58526429-58526448 None:intergenic 70.0%
TAAGCCTCAGGGGTGGCCGG+AGG + chr1.4:58526394-58526413 MS.gene39949:intron 70.0%
AGCCTCAGGGGTGGCCGGAG+GGG + chr1.4:58526396-58526415 MS.gene39949:intron 75.0%
! CTCAGGGGTGGCCGGAGGGG+CGG + chr1.4:58526399-58526418 MS.gene39949:intron 80.0%
! GCCCTGGACTGCCGCCCCTC+CGG - chr1.4:58526413-58526432 None:intergenic 80.0%
! GCCGGAGGGGCGGCAGTCCA+GGG + chr1.4:58526409-58526428 MS.gene39949:intron 80.0%
! CGCCCCTCCGGCCACCCCTG+AGG - chr1.4:58526401-58526420 None:intergenic 85.0%
! GGCCGGAGGGGCGGCAGTCC+AGG + chr1.4:58526408-58526427 MS.gene39949:intron 85.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 58525797 58532636 58525797 ID=MS.gene39949
chr1.4 mRNA 58525797 58532636 58525797 ID=MS.gene39949.t1;Parent=MS.gene39949
chr1.4 exon 58525797 58526145 58525797 ID=MS.gene39949.t1.exon1;Parent=MS.gene39949.t1
chr1.4 CDS 58525797 58526145 58525797 ID=cds.MS.gene39949.t1;Parent=MS.gene39949.t1
chr1.4 exon 58527023 58527230 58527023 ID=MS.gene39949.t1.exon2;Parent=MS.gene39949.t1
chr1.4 CDS 58527023 58527230 58527023 ID=cds.MS.gene39949.t1;Parent=MS.gene39949.t1
chr1.4 exon 58528025 58528196 58528025 ID=MS.gene39949.t1.exon3;Parent=MS.gene39949.t1
chr1.4 CDS 58528025 58528196 58528025 ID=cds.MS.gene39949.t1;Parent=MS.gene39949.t1
chr1.4 exon 58528466 58528531 58528466 ID=MS.gene39949.t1.exon4;Parent=MS.gene39949.t1
chr1.4 CDS 58528466 58528531 58528466 ID=cds.MS.gene39949.t1;Parent=MS.gene39949.t1
chr1.4 exon 58529046 58529159 58529046 ID=MS.gene39949.t1.exon5;Parent=MS.gene39949.t1
chr1.4 CDS 58529046 58529159 58529046 ID=cds.MS.gene39949.t1;Parent=MS.gene39949.t1
chr1.4 exon 58530043 58530159 58530043 ID=MS.gene39949.t1.exon6;Parent=MS.gene39949.t1
chr1.4 CDS 58530043 58530159 58530043 ID=cds.MS.gene39949.t1;Parent=MS.gene39949.t1
chr1.4 exon 58531215 58531341 58531215 ID=MS.gene39949.t1.exon7;Parent=MS.gene39949.t1
chr1.4 CDS 58531215 58531341 58531215 ID=cds.MS.gene39949.t1;Parent=MS.gene39949.t1
chr1.4 exon 58531433 58531719 58531433 ID=MS.gene39949.t1.exon8;Parent=MS.gene39949.t1
chr1.4 CDS 58531433 58531719 58531433 ID=cds.MS.gene39949.t1;Parent=MS.gene39949.t1
chr1.4 exon 58531803 58531993 58531803 ID=MS.gene39949.t1.exon9;Parent=MS.gene39949.t1
chr1.4 CDS 58531803 58531993 58531803 ID=cds.MS.gene39949.t1;Parent=MS.gene39949.t1
chr1.4 exon 58532098 58532183 58532098 ID=MS.gene39949.t1.exon10;Parent=MS.gene39949.t1
chr1.4 CDS 58532098 58532183 58532098 ID=cds.MS.gene39949.t1;Parent=MS.gene39949.t1
chr1.4 exon 58532273 58532349 58532273 ID=MS.gene39949.t1.exon11;Parent=MS.gene39949.t1
chr1.4 CDS 58532273 58532349 58532273 ID=cds.MS.gene39949.t1;Parent=MS.gene39949.t1
chr1.4 exon 58532460 58532636 58532460 ID=MS.gene39949.t1.exon12;Parent=MS.gene39949.t1
chr1.4 CDS 58532460 58532636 58532460 ID=cds.MS.gene39949.t1;Parent=MS.gene39949.t1
Gene Sequence

>MS.gene39949

ATGGGAAACGTAGACTATGATGATTACCCATGTTCAGGAATGAACGTTGATGAGAGTGTGCATGGTGTGGCAATTCCACCTCCTCAACCATTTTTGAAGTCTATGAAGTATTCAATGAAAGAGACTTTCTTTCCAGATGATCCATTGAGGAGGTTTAAGAATCAACCAGCTTCTAAAAAGTTGGTGCTTGGTCTTCAGTATTTTTTCCCCATATTTGAATGGGCACCAAGCTACACTTTTCAGTTCTTGAAATCTGATCTCATAGCTGGCATCACTATTGCTAGCTTGGCTATTCCTCAAGGCATTAGCTATGCCAAACTTGCCAACCTTCCTCCAATTCTTGGACTATGTGAGTTCTACTAGTATTAATTTGTTGCTTAATTATCATATAAATATATACCATTTTTTTGGTTTTACTAAATGAAATAGGATTAATTACTAAAATTAGTAACAATGTGTTTTCAAATTCAAACTGGACATTAAATCGGTGTATTATCTGAATCATAGTTTACTTGCTCGAACTATGATCAAACTTCTCAAACAACTAATTGTAAAGAGTACCAGTTCACCATTCATCTAGTCACAATTCAACTATAGTAAGCCTCAGGGGTGGCCGGAGGGGCGGCAGTCCAGGGCACCGCGTTTGTAGGGGCACCAAAAACTATTATTTTTACTTAGTGAGTATTTTACAAATATATTTCTTTTTAACTCGTTTGGATTAATTATATTGAAAATATATTTTGTGAGAAACTTGATGATTGAATAAATCATTTGCAAAGAAAGAAGACATTCAAATAATTAAAATGACACAACTTTATTGATTCGTCTCGGGCACCAAAAATTTTAGGACTGACTAAGACTATTTGATTCGATTTCTCAAACATTAAAAAATAAAATCCATAAAAAATATTTTGTTGCTAAAATGTTTATTGAGAGAATCAAAGACTAGTTTATATATTTTTTTGGGACATTGATATGGACCTCAAAAAAGAGTCTATACCAATTACCAATTAGCAAAATAATATATTTTATAATAAGATAATCAGATTCAATAGTTTATTAAAAATTACTAAAAATGGTAATCGTAAACTTTGAACATTTTTTTAAGCACCATTTTCTTCCATATACTTTTCTTGCTAATTAACTTTTTTATTAACTCAACACTTTTCTTGTCATTATTAAATATTTATGTTATGACATGTTTTATTGATGTACATATTTTCCAGATTCAAGCTTTATACCACCGTTAATTTATGCAATGATGGGTAGTTCAAGGGATTTGGCAGTTGGAACTGTGGCAGTTGGATCTCTTCTGATGGGTTCCATGTTGGCCAATGAGGTTAATCCTACCCAAAATCCTAAGCTTTTTCTCCACCTTGCTTTCACAGCTACATTCTTTGCTGGACTTTTGCAAGCTTCATTGGGTCTCTTTAGGTAATAAAAATTCTAATCAATAATTAATAACTACTCTAAATATCGTTAAAAAGTAGTATGTTGTCATAAAGTAAACTACTATTAAAATGATATGTTAGTATGTTACTGGATATGGAAAAATAAATAAAATAATAGCAATATGGGAAAAAGGTAAGAATATATATATCCTAACCAGGATAGATATCTTGCCCTTCTTTTTGTGTTGTCTTGTTAAAAGATCTTGCAACTTTGCACCATGCAATGAGATTCGTCCATTTCGCATCCCATATTACTATTACAATGAAGAATTTAATTATTCTGAATTAAGGCATATACTTGGTTTAATCTTGAACAAAAAAAATACTTGGTTTAATAATTTACTACAAATATTAAATCTATCAATTGAACTGTAAAATAAAAATTCTTATTAAGTAATATAGTTGATATATAAAATTAAAAGTTCACTTGTTCTTAAAATTCTTTTAGCAAGTGTGATTGGTATATTCATTGTTTGTTTTCAGTCATATAGTTGAAATGATACAATTATTTTATGAATTTCCCTTTCCGAATGTTGCTATTTATCTAGAGAGTTTTTATCAAGAATTTATCAAGAAAATGTCTCAGCCAATTAAATTTGTTATTTGCCGGAAATCAAGGGAGGTAATGGTGTGTAATTAAGAAAATGTGTTAGCAAATACACTGTCTGGAAATTTTCTTGATACATTTTGTCACTGTATCTATCATTTCCCTTTCCTTAAATATTATTGATGCATGGTAATATAACAAGTTATAATAACGCATGAGGTGGGGTGCAGGTTAGGGTTTATCGTGGATTTCCTGTCACATGCAGCCATAGTAGGGTTCATGGGAGGAGCAGCTACAGTGGTTTGTCTACAGCAGCTGAAATCAATTCTAGGACTTGAACATTTCACCCATGCTGCTGATATCGTATCCGTCATGCGATCCATTTTTACCCAAACTCATCAGGTAGAAAAACTAAAAACGAAATCGATTATATTTATACTGATCAAAAACTTATTCAAACCTATTTCTCTAGAGCGGGGTCTTGAACCAAGTTTCTCAAAGTTGAAGAGAGAAACTCTCAATCAAGCGATCTCTTGGAAGACCGGCTTAGTCAAACCTATTTTATATAAACAAACATATTTTATTTTTATAGTTACAATAATGCTATGTAACTTATCTGACTTAGTTTTTTACTCCAATAAAATTTTTGTTTATTTATTTGGTTATTGCAGTGGAGGTGGGAAAGCGCTGTGTTGGGATTTTGCTTCATTTTCTTTCTCCTTGTTACAAGATACTTCGTAAGTATTACCTAACACATATTCATTGGCATAAACTATAGAAATTTATTATTAAAAATTATTAATAATGCATGATCTAGATTTCTTTAGTTGCTATGATAATCTTTTTCTCACCAAATGATATTTACACAGCAAGAGCCATGACTATGACTGTGAAAGGATTAGATCCCAAATCTGTCACTTATTTCTCCTTGCATTAATTATTATGCTAGACTAGATGTTTATAGAAATTATGGGAATTCAAAATTAGCTTTGATTAATATCAATTTCTTCCCTACCCTAGCTGCTACTCTTGATAAGATAGATTAAAGTCAACAAATTTTCTCAGCGGCATTTGACGTTTAAAATTACTGCAGCCATGACAAAAGTAGCTACGTAGTATCATATCATAATCATACTATTATTACTGTATAATAAAATAAATAAATTTATATGCTATCATTTTTTACTAAAATTAATTTAACTTGAAATTGGAACTGCAACGGTGGTTTGTGACGTTAATTGATCAATGCAGAGCAAGAAACAACCGAGGTTCTTTTGGGTGTCAGCAATGACGCCGTTGGCGTCCGTTATACTGGGAAGTGTGCTGGTTTATTTCACTCACGCCGAGCACCACGGTGTTCAAGTGGTGAGCATTTCTCCGATTAGATTAATTTTTATGTGTTGACGTTACAATTTATTTTACACGTACATTCAATCAAATTTATATTATGATATGACTTTTTTTGTTCCTGTAAATATTTATATGCAAACAACAAGTTGGTTTGATTTAATCGGATAAATGTTAAAAAAGTTGTATCATTAGTATATACAAATTAAATTCTTACATGTATATATTGACCCTCTAAATTTTACATATATATCAAATCACGTCGTGTAGATATTTGTGAGAATATTTTATGAATTAAATTAAAAAAACGACGTTATGATGTGATTTGATTAAAAGCATAAGTCATTTTTTTTATAATTTTTTACTTTCCTTCAAGGATGATCTAATCATGATTTTATTAAATATACTTTGTATTAAATAAAATAAAATTGATTTGCATAGTCTATATTTTGTCACAACGCACTGAGACAGAAAAGAGCCAAACACTGTTGAGTGCTATAGGGTCCAACCGATACCACCCATATTCAATGAGTATTCTTATCTGGTAGGACCTGCAAATGAATCATTTTTCTAAAACCCACCATGAGTACACATGTTACATGTATACTTCACACCTTTTTAATTTCACAAATTGCAGTTTGATTTTTTAAATTAATGAAATAATTTATGAAATTGAAAAATCTTTCATTGTACATTAGCTCATTTATATGTAAGTAAAATTTTGATCAACAAAAGTGTATATATTTAGTCTAAATTTTAAACAAGATATATCAATTTTTGTTGATCAAACTTTATCTTATATACATGACATCGGAAGGATTAATTAACATATTACTACTTTTGTTGGACTAATATATATATTTTTTTGGTATTGTAATTGCCAAATTGGCACATGTTTCAGATAGGAGAATTGAAGAAAGGACTAAATCCGCCATCACTCACAGATTTGGTATTTGTGTCACCATATATGACCACAGCTATCAAAACTGGCCTTATTGTTGGCATTATAGCTCTTGCGGTAACTACCTCTCAACTCAAACTCTTTTATTTCCTTTATTGCCTAATAATACACTTTTAGAAATGGCAAAACTATAACGTGACTTAACATGTGTGCACAACATAATAAAGACACACTCTAACTCTAATATGTCACATCACATCCTTAACCAAAGAAGAATGAAATGAAACTAGACAAGGCATTGAGGCAATAACTTTATTATTGGTGGATTTATATGTTTTTGTCAAATGCTCATCATATGGACATGGTCCTCCTCATTTGACAATTATTTCGATACAAGTCAAATTGTGTCTTCAAGAGACAAAGTTACTTGAATGCACACCAGATCACATGACCTTTACCAATAGTTCTAGGGCATTATCTTTGTATCTATTCCTATATAATTTTATACAAAAGCATATACCTCTTTATTTACATTTAAAAGAATAAATTGAAATTATTATATGCTTGTTTGCAAGCTTGTTACCTTGCCAAGGTTTATATGAGGTCATAATCATATTGATTGCATAATTTGTTAGTAGTCATTAAATACAAAACAATAGGTTTTTTCTCTTCTCTCAAAAAAAAAAAAAAAGGTTTTGGTGCATATATATGAAAGTTATTTGTAGTGGACAAACATGTACATCATGCCATAGCTGTTACTACAAGATTTAAGTAGAAAGAGTTGACCTTATACTACTCTTTTTTAAAAACAAAATGGGCTAATGAAAAATATTATTAATTAAAATGACATTAATGATCATTTTAGAACCGGTTCTATGAGAAAATTATTAATAGTCATTTTACAACCGGCTCCAAGAGAATTTGAATTATTTGAATTTCATCCCTTGATATTACAAGGTCAAACTCTTATCATTTAGCTGACACCTTATCGAATACTTATCATATTCAAAATTCTTTTAATTATATCATGAGGATACTTTTAAATCTATGAAATGGCACATGCAATGCCTTTCTTCCAATTAAATGTCATATGTAATAGACAAAGTCCTAGATATGCTAATTTAGTTGATGTAGATTTCAATAGGATCTTGAATGTTGGTGCTGTTTTTCAGGAAGGAATAGCTGTGGGAAGAAGCTTTGCAATGTATAAAAATTATCATATTGATGGCAACAAAGAGATGATAGCTATTGGAACCATGAACATAGTTGGTTCTTTCACCTCTTGCTACCTCACAACTGGTAAACATCATCACCAAATCTTAACATCAGTATTACTTTTGTACATTAATTGCTAACATGTTTTTTGTTATAAAAATGATAACTCTTTCAGGGCCATTTTCGCGTTCGGCCGTGAACTATAATGCTGGATGCAAGACAGCAGCATCCAACATTGTGATGTCAATTGCAGTCATGTTGACACTGTTGTTCTTGACACCTTTGTTCTATTACACTCCTCTGGTGGTACTAGCAGCCATAATTGTATCTGCAATGCTTGGACTTATAGATTATGAAGCAGCCATCCATCTCTGGAAGATTGACAAATTCGATTTTTTCGTCTGCATTAGCGCATATATGGGCGTTGTCTTTGGCAGTGTTGAAATTGGCTTAGTCATAGCAGTATGTATCAATAGTCTCTTTGTTCTCCCACTTCTCAGTCTGCTATATAAATTTATGAAATTAATGTGTTTTCTTATGTTTAGGTTGCAATATCAGTGCTTCGGTTACTACTATTTGTTGCAAGGCCAAGGACATTTGTTTTGGGAAACATTCCAAATTCTGTAATATACAGAAACATTGAGCATTATCCGAATGCAAATCGTGTTTCCGGAATTCTAATTCTAAAGATTGATGCACCAATTTACTTTGCCAATGCAAGCTATTTAAGAGAGAGGTAAGATACCTGTAAATTTGCTTTTTTCCTTTTTCTTTCTCTAGCATGTGAAATTTTCTGGCCTGGAATAATTTGACACACAAGGAAACTGTTATTGTTCATAGGATCTCAAGGTGGATCGATGAAGAGGAAGACAGAATTAAAGATACAGGGGAGACAATTTTGAATTATGTTATACTGGATATGAGTGGTGAGTAATGAGCCTTTGAGATATGGCAATTAATCAAAACATGGTTATTAGAATTTTCAGTCTAACTTGCAGTGTAATTTTATTGGCAGCTGTTGGAAATATTGATACAAGTGGAATAAGTATGCTTGAAGAGACTAAAAAGATGGCTGAAAGAAGAGAGCTGCAAGTAATTATTTCTCTAATGTCATTTGCTAATCATGAACCAAATATTTTTTATAGCTTATTCATTGTAGCATTTTTGTTAACCTTTAAATCTTTTCATTCCTATGATTACAGCTTGTTTTGGTCAATCCTGGAAGTGAGGTGATGAAGAAACTCAACAAATCCAGCTTCCAAAAGGATGTAGGAGGAAATTGGATCTATCTGACAGTGGAAGATGCTGTTAGAGCATGTAACTTTGCATGCAAAACAAATCCCAAAAGAGATGAATCAGAGGGTTGGAACAATGTCTGA
Protein sequence

>MS.gene39949.t1

MGNVDYDDYPCSGMNVDESVHGVAIPPPQPFLKSMKYSMKETFFPDDPLRRFKNQPASKKLVLGLQYFFPIFEWAPSYTFQFLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLANEVNPTQNPKLFLHLAFTATFFAGLLQASLGLFRLGFIVDFLSHAAIVGFMGGAATVVCLQQLKSILGLEHFTHAADIVSVMRSIFTQTHQWRWESAVLGFCFIFFLLVTRYFSKKQPRFFWVSAMTPLASVILGSVLVYFTHAEHHGVQVIGELKKGLNPPSLTDLVFVSPYMTTAIKTGLIVGIIALAEGIAVGRSFAMYKNYHIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMSIAVMLTLLFLTPLFYYTPLVVLAAIIVSAMLGLIDYEAAIHLWKIDKFDFFVCISAYMGVVFGSVEIGLVIAVAISVLRLLLFVARPRTFVLGNIPNSVIYRNIEHYPNANRVSGILILKIDAPIYFANASYLRERISRWIDEEEDRIKDTGETILNYVILDMSAVGNIDTSGISMLEETKKMAERRELQLVLVNPGSEVMKKLNKSSFQKDVGGNWIYLTVEDAVRACNFACKTNPKRDESEGWNNV