Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061401.t1 | XP_003621787.2 | 99 | 706 | 7 | 0 | 1 | 706 | 1 | 706 | 0.00E+00 | 1297.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061401.t1 | Q9FY46 | 73.5 | 637 | 167 | 1 | 8 | 642 | 12 | 648 | 1.3e-264 | 913.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061401.t1 | G7KVN8 | 99.0 | 706 | 7 | 0 | 1 | 706 | 1 | 706 | 0.0e+00 | 1297.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061401.t1 | MTR_7g022870 | 99.008 | 706 | 7 | 0 | 1 | 706 | 1 | 706 | 0.0 | 1414 |
MS.gene061401.t1 | MTR_7g022870 | 98.774 | 571 | 7 | 0 | 1 | 571 | 1 | 571 | 0.0 | 1134 |
MS.gene061401.t1 | MTR_5g061880 | 38.136 | 590 | 352 | 8 | 57 | 636 | 61 | 647 | 1.20e-135 | 414 |
MS.gene061401.t1 | MTR_3g073780 | 39.100 | 578 | 338 | 7 | 70 | 636 | 77 | 651 | 1.24e-128 | 396 |
MS.gene061401.t1 | MTR_2g008470 | 37.819 | 587 | 355 | 7 | 55 | 633 | 64 | 648 | 4.57e-125 | 387 |
MS.gene061401.t1 | MTR_2g008470 | 37.819 | 587 | 355 | 7 | 55 | 633 | 83 | 667 | 5.20e-125 | 387 |
MS.gene061401.t1 | MTR_1g071530 | 34.537 | 637 | 399 | 10 | 14 | 636 | 5 | 637 | 3.72e-120 | 374 |
MS.gene061401.t1 | MTR_4g084640 | 36.968 | 587 | 354 | 9 | 71 | 647 | 67 | 647 | 2.76e-119 | 372 |
MS.gene061401.t1 | MTR_6g086170 | 35.195 | 591 | 369 | 9 | 67 | 649 | 52 | 636 | 1.02e-118 | 370 |
MS.gene061401.t1 | MTR_7g095430 | 35.499 | 631 | 389 | 11 | 19 | 636 | 9 | 634 | 8.68e-118 | 368 |
MS.gene061401.t1 | MTR_4g084620 | 34.841 | 597 | 364 | 10 | 71 | 652 | 63 | 649 | 1.69e-117 | 367 |
MS.gene061401.t1 | MTR_2g102243 | 34.848 | 594 | 373 | 7 | 50 | 633 | 47 | 636 | 2.71e-115 | 361 |
MS.gene061401.t1 | MTR_4g011970 | 34.768 | 604 | 360 | 11 | 50 | 633 | 54 | 643 | 2.02e-114 | 359 |
MS.gene061401.t1 | MTR_3g073780 | 40.156 | 513 | 293 | 7 | 70 | 571 | 77 | 586 | 4.84e-114 | 356 |
MS.gene061401.t1 | MTR_5g061860 | 34.578 | 616 | 378 | 10 | 42 | 637 | 37 | 647 | 1.40e-112 | 354 |
MS.gene061401.t1 | MTR_3g073780 | 40.909 | 484 | 274 | 6 | 70 | 542 | 77 | 559 | 1.05e-109 | 343 |
MS.gene061401.t1 | MTR_3g073730 | 36.014 | 572 | 347 | 9 | 83 | 639 | 88 | 655 | 6.82e-109 | 345 |
MS.gene061401.t1 | MTR_3g087740 | 35.176 | 597 | 365 | 10 | 55 | 636 | 60 | 649 | 9.47e-109 | 344 |
MS.gene061401.t1 | MTR_2g102243 | 35.754 | 537 | 331 | 7 | 50 | 576 | 47 | 579 | 1.72e-105 | 333 |
MS.gene061401.t1 | MTR_7g095430 | 36.283 | 565 | 342 | 11 | 19 | 570 | 9 | 568 | 2.80e-102 | 325 |
MS.gene061401.t1 | MTR_5g061860 | 35.645 | 519 | 315 | 8 | 42 | 542 | 37 | 554 | 3.44e-96 | 308 |
MS.gene061401.t1 | MTR_3g087730 | 31.803 | 588 | 377 | 11 | 70 | 637 | 70 | 653 | 2.35e-92 | 301 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061401.t1 | AT5G13550 | 76.661 | 617 | 144 | 0 | 26 | 642 | 32 | 648 | 0.0 | 972 |
MS.gene061401.t1 | AT3G12520 | 68.625 | 698 | 194 | 5 | 12 | 706 | 2 | 677 | 0.0 | 951 |
MS.gene061401.t1 | AT3G12520 | 69.809 | 679 | 182 | 4 | 29 | 706 | 5 | 661 | 0.0 | 948 |
MS.gene061401.t1 | AT3G12520 | 73.034 | 534 | 141 | 2 | 12 | 542 | 2 | 535 | 0.0 | 785 |
MS.gene061401.t1 | AT4G08620 | 40.345 | 580 | 335 | 7 | 70 | 640 | 67 | 644 | 3.05e-131 | 402 |
MS.gene061401.t1 | AT3G51895 | 35.341 | 631 | 391 | 11 | 33 | 649 | 25 | 652 | 5.90e-126 | 389 |
MS.gene061401.t1 | AT3G51895 | 35.341 | 631 | 391 | 11 | 33 | 649 | 70 | 697 | 9.42e-126 | 390 |
MS.gene061401.t1 | AT1G22150 | 38.280 | 593 | 353 | 9 | 54 | 636 | 59 | 648 | 5.01e-123 | 381 |
MS.gene061401.t1 | AT1G22150 | 38.280 | 593 | 353 | 9 | 54 | 636 | 59 | 648 | 5.01e-123 | 381 |
MS.gene061401.t1 | AT1G22150 | 38.280 | 593 | 353 | 9 | 54 | 636 | 59 | 648 | 5.01e-123 | 381 |
MS.gene061401.t1 | AT4G02700 | 35.945 | 587 | 364 | 8 | 70 | 647 | 55 | 638 | 4.51e-120 | 374 |
MS.gene061401.t1 | AT1G78000 | 38.200 | 589 | 353 | 7 | 57 | 636 | 59 | 645 | 1.19e-117 | 367 |
MS.gene061401.t1 | AT1G78000 | 38.200 | 589 | 353 | 7 | 57 | 636 | 59 | 645 | 1.19e-117 | 367 |
MS.gene061401.t1 | AT1G78000 | 38.200 | 589 | 353 | 7 | 57 | 636 | 59 | 645 | 1.19e-117 | 367 |
MS.gene061401.t1 | AT1G23090 | 33.895 | 593 | 381 | 8 | 50 | 633 | 28 | 618 | 1.27e-115 | 361 |
MS.gene061401.t1 | AT3G15990 | 35.343 | 597 | 366 | 11 | 50 | 633 | 51 | 640 | 5.16e-113 | 355 |
MS.gene061401.t1 | AT5G19600 | 34.530 | 585 | 366 | 8 | 68 | 645 | 58 | 632 | 4.17e-110 | 347 |
MS.gene061401.t1 | AT1G78000 | 39.020 | 551 | 325 | 7 | 57 | 598 | 59 | 607 | 4.29e-109 | 344 |
MS.gene061401.t1 | AT5G10180 | 35.605 | 587 | 355 | 11 | 67 | 637 | 94 | 673 | 1.08e-107 | 342 |
MS.gene061401.t1 | AT1G77990 | 36.585 | 574 | 349 | 11 | 75 | 635 | 94 | 665 | 6.58e-105 | 335 |
MS.gene061401.t1 | AT1G22150 | 37.879 | 528 | 315 | 9 | 54 | 571 | 59 | 583 | 6.98e-102 | 324 |
MS.gene061401.t1 | AT1G78000 | 38.168 | 524 | 313 | 7 | 57 | 571 | 59 | 580 | 9.87e-97 | 311 |
MS.gene061401.t1 | AT1G23090 | 33.333 | 474 | 308 | 6 | 167 | 633 | 14 | 486 | 2.73e-89 | 288 |
MS.gene061401.t1 | AT1G23090 | 33.333 | 474 | 308 | 6 | 167 | 633 | 14 | 486 | 2.73e-89 | 288 |
MS.gene061401.t1 | AT1G23090 | 33.333 | 474 | 308 | 6 | 167 | 633 | 14 | 486 | 2.73e-89 | 288 |
MS.gene061401.t1 | AT1G78000 | 38.427 | 445 | 264 | 6 | 136 | 571 | 2 | 445 | 3.86e-76 | 252 |
MS.gene061401.t1 | AT1G78000 | 38.657 | 432 | 255 | 6 | 57 | 479 | 59 | 489 | 1.18e-70 | 239 |
Find 161 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCTCTTGGAACAGAAAATT+TGG | 0.155451 | 7.1:-76053622 | None:intergenic |
ATATTTGTGTATGCCATATT+TGG | 0.196386 | 7.1:+76051055 | MS.gene061401:CDS |
AAGAAAAGCAGTTGGAATTA+AGG | 0.197671 | 7.1:-76053661 | None:intergenic |
AAATATGGCATACACAAATA+TGG | 0.229976 | 7.1:-76051053 | None:intergenic |
CTTGGTGTTTCCAATGTTCT+TGG | 0.234908 | 7.1:+76054228 | MS.gene061401:CDS |
CCCTCTTACAGCAGTAGTTT+TGG | 0.235000 | 7.1:+76052620 | MS.gene061401:CDS |
CTATTGGTGTCTAATGTTCT+TGG | 0.257787 | 7.1:+76051121 | MS.gene061401:CDS |
GGCAATTCTACTGGCTCTTA+TGG | 0.265596 | 7.1:+76051183 | MS.gene061401:CDS |
GTGTTGTGCTGCAGCTGTTT+TGG | 0.266171 | 7.1:+76056385 | MS.gene061401:intron |
GGAGTATCCGCAATAGTTTC+AGG | 0.283201 | 7.1:+76054477 | MS.gene061401:CDS |
GACAAAGTAAGCAGAATATC+TGG | 0.285380 | 7.1:-76057439 | None:intergenic |
GCTGGACTTCAACCGATATA+TGG | 0.294692 | 7.1:+76049901 | MS.gene061401:CDS |
GTATCTTCAGGTTGATCTTA+TGG | 0.310801 | 7.1:+76049488 | MS.gene061401:CDS |
TTGAGATTGGCGTAATGGTT+GGG | 0.310946 | 7.1:+76056064 | MS.gene061401:CDS |
GGTAGCTTTGGTTTCCCTAT+TGG | 0.313903 | 7.1:+76051105 | MS.gene061401:CDS |
CTGATATTTGCAAAGTAAAT+AGG | 0.315712 | 7.1:-76056500 | None:intergenic |
GTAAGCAGAATATCTGGATT+TGG | 0.319100 | 7.1:-76057433 | None:intergenic |
CAAGAACATTAGACACCAAT+AGG | 0.323164 | 7.1:-76051120 | None:intergenic |
CCATTGTATGTATATGCTTC+AGG | 0.324548 | 7.1:-76056452 | None:intergenic |
GTTGGATTCGGATATATAAA+TGG | 0.334408 | 7.1:+76049460 | MS.gene061401:CDS |
TATTTGTGTATGCCATATTT+GGG | 0.337965 | 7.1:+76051056 | MS.gene061401:CDS |
GTCGATGTCATATGCGAAAT+TGG | 0.343823 | 7.1:+76049879 | MS.gene061401:intron |
CATAGACTCTAGCGCTGTTC+AGG | 0.347604 | 7.1:+76057246 | MS.gene061401:CDS |
CATGAAAGTGGTGCAAAATC+TGG | 0.349287 | 7.1:+76054456 | MS.gene061401:CDS |
GGCTTTGAAAGACTTGTATC+AGG | 0.353524 | 7.1:+76057267 | MS.gene061401:CDS |
TATAACAGGTGTGGCTATAC+TGG | 0.354199 | 7.1:+76053683 | MS.gene061401:CDS |
TCCGATTGGGAATCTCTGAT+TGG | 0.358619 | 7.1:-76057700 | None:intergenic |
TTCTACTGGCTCTTATGGTT+GGG | 0.362190 | 7.1:+76051188 | MS.gene061401:CDS |
ATCGTGATCTCTGCTGTAAT+TGG | 0.362941 | 7.1:+76055218 | MS.gene061401:CDS |
CCGATTGGGAATCTCTGATT+GGG | 0.363878 | 7.1:-76057699 | None:intergenic |
TGCAAATATCAGTTACATAA+AGG | 0.366797 | 7.1:+76056511 | MS.gene061401:CDS |
TGGGATCCTTCAGTGCATAA+TGG | 0.369640 | 7.1:+76051207 | MS.gene061401:CDS |
ATTCTACTGGCTCTTATGGT+TGG | 0.370008 | 7.1:+76051187 | MS.gene061401:CDS |
TTCCTTGTTCTCGTTGGATT+CGG | 0.370753 | 7.1:+76049448 | MS.gene061401:CDS |
CCCAAAACTACTGCTGTAAG+AGG | 0.373728 | 7.1:-76052621 | None:intergenic |
ATTCTTACAATTGAAATTGA+TGG | 0.395379 | 7.1:-76052672 | None:intergenic |
ACTGCTTCAGCTATTGTGAT+TGG | 0.408102 | 7.1:+76051674 | MS.gene061401:CDS |
GAGGAATGACGTGGCTTGAA+TGG | 0.412301 | 7.1:+76049412 | MS.gene061401:CDS |
GTACAAGTTACGGGACATTC+AGG | 0.413233 | 7.1:+76057291 | MS.gene061401:CDS |
AGCAGTTGGTCCGGTAGCTT+TGG | 0.414161 | 7.1:+76051093 | MS.gene061401:CDS |
CGGTGTTATGCTCGTTCCTC+AGG | 0.417618 | 7.1:+76049524 | MS.gene061401:CDS |
GAAGATGAAGACGTAAGGTT+TGG | 0.417643 | 7.1:-76049336 | None:intergenic |
CAGAATATCTGGATTTGGAT+TGG | 0.419878 | 7.1:-76057428 | None:intergenic |
CGCCGAATGTCGCGATTTCG+CGG | 0.424546 | 7.1:+76049373 | MS.gene061401:CDS |
TACTTTGTCTAAAGCCGGTC+TGG | 0.426141 | 7.1:+76057453 | MS.gene061401:CDS |
AGTCGGCATGGTTGCGGCGG+AGG | 0.432758 | 7.1:-76049283 | None:intergenic |
AAAGAAGACTGACCTGTAGT+AGG | 0.433393 | 7.1:-76054270 | None:intergenic |
TTGTTCCTTGGTATTGAGAT+TGG | 0.434224 | 7.1:+76056051 | MS.gene061401:CDS |
AGAGTTGTATATCAGGTTGC+GGG | 0.436625 | 7.1:+76056601 | MS.gene061401:intron |
TCTTGATTCCTTGTTCTCGT+TGG | 0.437358 | 7.1:+76049442 | MS.gene061401:CDS |
TATAATAGCTGGAGCTGATA+AGG | 0.439452 | 7.1:+76051769 | MS.gene061401:CDS |
CTGGCGAGAAGACCCAAATA+TGG | 0.444652 | 7.1:-76051068 | None:intergenic |
AACCGCGAAATCGCGACATT+CGG | 0.445101 | 7.1:-76049375 | None:intergenic |
ATTAGCCATTCAGTAATCTC+TGG | 0.447549 | 7.1:+76051644 | MS.gene061401:CDS |
GCTCTTGGAACAGAAAATTT+GGG | 0.448485 | 7.1:-76053621 | None:intergenic |
GGGATCCTTCAGTGCATAAT+GGG | 0.449624 | 7.1:+76051208 | MS.gene061401:CDS |
ACAATGTTGTAGTGCTAGTA+AGG | 0.455578 | 7.1:-76056032 | None:intergenic |
ATGTCATATGCGAAATTGGC+TGG | 0.456493 | 7.1:+76049883 | MS.gene061401:CDS |
TGACAACAATGGTTCCGATT+GGG | 0.460461 | 7.1:-76057713 | None:intergenic |
CTTCAGGTTGATCTTATGGC+TGG | 0.463796 | 7.1:+76049492 | MS.gene061401:CDS |
CTGTGTGATGCGAAGGTTGT+TGG | 0.465976 | 7.1:-76049246 | None:intergenic |
CACTGAGTTGGCAATTCTAC+TGG | 0.466495 | 7.1:+76051174 | MS.gene061401:CDS |
GCCGGTCTGGTGGAGTTGAT+AGG | 0.466966 | 7.1:+76057466 | MS.gene061401:CDS |
GAATGTGACCTTTCAGATCC+TGG | 0.470319 | 7.1:-76057559 | None:intergenic |
CTGCTTACTTTGTCTAAAGC+CGG | 0.473722 | 7.1:+76057448 | MS.gene061401:CDS |
GCATGGTTGCGGCGGAGGGA+AGG | 0.474372 | 7.1:-76049278 | None:intergenic |
AGCACTACAACATTGTTCCT+TGG | 0.474895 | 7.1:+76056039 | MS.gene061401:CDS |
AAGGCATTAGCAGCAAAGAA+TGG | 0.475696 | 7.1:+76053824 | MS.gene061401:CDS |
AATATGGCATACACAAATAT+GGG | 0.477982 | 7.1:-76051052 | None:intergenic |
AAAATTAATTCTTTCAACCT+CGG | 0.479562 | 7.1:-76056663 | None:intergenic |
TAAATGGCGTGAGTATCTTC+AGG | 0.481726 | 7.1:+76049476 | MS.gene061401:CDS |
TTACGATTCTTGAGAGCTGC+AGG | 0.485999 | 7.1:+76052597 | MS.gene061401:CDS |
AAATTAATTCTTTCAACCTC+GGG | 0.486146 | 7.1:-76056662 | None:intergenic |
TTGGTTAAAAGTATAATAGC+TGG | 0.487738 | 7.1:+76051758 | MS.gene061401:CDS |
AATAATTGCGAGAAGAAGCT+TGG | 0.489067 | 7.1:-76057610 | None:intergenic |
AGGACGAGTCGGCATGGTTG+CGG | 0.489989 | 7.1:-76049289 | None:intergenic |
GTATCAGGAGTACAAGTTAC+GGG | 0.492382 | 7.1:+76057282 | MS.gene061401:CDS |
AACTTACAAAGTCCATATAT+CGG | 0.495790 | 7.1:-76049913 | None:intergenic |
TCTGCATACTCAAAAGCTCT+TGG | 0.495908 | 7.1:-76053636 | None:intergenic |
TGCGCCACCGCTGATGCGCA+TGG | 0.498289 | 7.1:+76049215 | None:intergenic |
TGAGATTGGCGTAATGGTTG+GGG | 0.499094 | 7.1:+76056065 | MS.gene061401:CDS |
TTGACAACAATGGTTCCGAT+TGG | 0.500344 | 7.1:-76057714 | None:intergenic |
TCTCTGATTGGGGCGAGCGG+AGG | 0.501476 | 7.1:-76057688 | None:intergenic |
ATTAACAGCTGATCTTGAAA+AGG | 0.503105 | 7.1:-76054433 | None:intergenic |
TGGTATTGAGATTGGCGTAA+TGG | 0.507000 | 7.1:+76056059 | MS.gene061401:CDS |
ATAACTGATCCCATTACAAA+AGG | 0.509926 | 7.1:-76052445 | None:intergenic |
AAGAACATTAGACACCAATA+GGG | 0.510273 | 7.1:-76051119 | None:intergenic |
GTCGGCATGGTTGCGGCGGA+GGG | 0.513763 | 7.1:-76049282 | None:intergenic |
TCCTATCAACTCCACCAGAC+CGG | 0.514447 | 7.1:-76057467 | None:intergenic |
CTACCGGACCAACTGCTAGC+TGG | 0.514607 | 7.1:-76051087 | None:intergenic |
GATCTCTGCTGTAATTGGTC+TGG | 0.514624 | 7.1:+76055223 | MS.gene061401:CDS |
AGGCATTAGCAGCAAAGAAT+GGG | 0.516056 | 7.1:+76053825 | MS.gene061401:CDS |
ATTGAGATTGGCGTAATGGT+TGG | 0.516500 | 7.1:+76056063 | MS.gene061401:CDS |
GGTTGCGGCGGAGGGAAGGT+CGG | 0.520986 | 7.1:-76049274 | None:intergenic |
ACAACTACCGACTTAGAGTC+TGG | 0.521192 | 7.1:+76057655 | MS.gene061401:CDS |
TGTATCAGGAGTACAAGTTA+CGG | 0.523020 | 7.1:+76057281 | MS.gene061401:CDS |
AAGTAGCAAGATTATACCAT+TGG | 0.527727 | 7.1:+76051739 | MS.gene061401:CDS |
AAGAAGACTGACCTGTAGTA+GGG | 0.533004 | 7.1:-76054269 | None:intergenic |
GTAAGGTTTGGATGTTGCAT+AGG | 0.533994 | 7.1:-76049324 | None:intergenic |
TGAGGTATGTTCTCAAATAG+TGG | 0.538351 | 7.1:-76054534 | None:intergenic |
TGCATAGGGATGACTCTGAT+AGG | 0.538732 | 7.1:-76049309 | None:intergenic |
GAGTATCCGCAATAGTTTCA+GGG | 0.541820 | 7.1:+76054478 | MS.gene061401:CDS |
CGCGAAATCGCGACATTCGG+CGG | 0.546313 | 7.1:-76049372 | None:intergenic |
GTTATATCCAGGGAAAATCA+AGG | 0.549327 | 7.1:+76052568 | MS.gene061401:intron |
AAAGAATGAACCAAGAACAT+TGG | 0.551812 | 7.1:-76054238 | None:intergenic |
ACTATTTGAGAACATACCTC+AGG | 0.552052 | 7.1:+76054536 | MS.gene061401:CDS |
TTTCTATAAACAGTTGTCCC+TGG | 0.552260 | 7.1:-76056416 | None:intergenic |
TAAGGTTTGGATGTTGCATA+GGG | 0.555619 | 7.1:-76049323 | None:intergenic |
TTTGTCTAAAGCCGGTCTGG+TGG | 0.555936 | 7.1:+76057456 | MS.gene061401:CDS |
TGGAGTTGATAGGAAAAGAA+TGG | 0.556099 | 7.1:+76057476 | MS.gene061401:CDS |
TCTTCTCGCCAGCTAGCAGT+TGG | 0.556746 | 7.1:+76051079 | MS.gene061401:CDS |
AGCAAAGAATGGGTATGAGT+TGG | 0.556759 | 7.1:+76053835 | MS.gene061401:CDS |
TCAGCTGTTAATCATGAAAG+TGG | 0.557119 | 7.1:+76054444 | MS.gene061401:CDS |
ACCGACTTAGAGTCTGGTAA+TGG | 0.559367 | 7.1:+76057661 | MS.gene061401:CDS |
TCGCCAGCTAGCAGTTGGTC+CGG | 0.561251 | 7.1:+76051084 | MS.gene061401:CDS |
CCTGAAGCATATACATACAA+TGG | 0.562941 | 7.1:+76056452 | MS.gene061401:CDS |
AGTGCATAATGGGACTATTG+AGG | 0.564919 | 7.1:+76051218 | MS.gene061401:CDS |
CCCAATCAGAGATTCCCAAT+CGG | 0.565097 | 7.1:+76057699 | MS.gene061401:CDS |
TCGAAGAAGATGAAGACGTA+AGG | 0.567031 | 7.1:-76049341 | None:intergenic |
CGGTTCGCGTCGAAGCTTCG+AGG | 0.570558 | 7.1:+76049393 | MS.gene061401:CDS |
ATAGTCCCATTATGCACTGA+AGG | 0.574221 | 7.1:-76051213 | None:intergenic |
CTTACAATTGAAATTGATGG+TGG | 0.574493 | 7.1:-76052669 | None:intergenic |
CATGTTCAAAGTTTGAAACC+AGG | 0.577959 | 7.1:+76057541 | MS.gene061401:CDS |
ATCCGAATCCAACGAGAACA+AGG | 0.578833 | 7.1:-76049450 | None:intergenic |
TTAGGTGGGAGAGATACCTC+AGG | 0.579082 | 7.1:+76053593 | MS.gene061401:intron |
CAACTCAGTGTATAACTCAC+TGG | 0.582889 | 7.1:-76051161 | None:intergenic |
ATATCAGTTACATAAAGGAC+AGG | 0.585956 | 7.1:+76056516 | MS.gene061401:CDS |
CCTGTTATAAGAAAAGCAGT+TGG | 0.586346 | 7.1:-76053669 | None:intergenic |
TTCAAAATGCAGGAGTCGGT+AGG | 0.591938 | 7.1:+76053794 | MS.gene061401:intron |
CGATTGGGAATCTCTGATTG+GGG | 0.597169 | 7.1:-76057698 | None:intergenic |
TATGATCCCTGAAACTATTG+CGG | 0.601584 | 7.1:-76054484 | None:intergenic |
TTCTACAAGACGTGGTCCCG+AGG | 0.601685 | 7.1:+76056646 | MS.gene061401:CDS |
AATAGGGAAACCAAAGCTAC+CGG | 0.601894 | 7.1:-76051103 | None:intergenic |
GCAATTATTTAAGCAGAGAG+AGG | 0.604638 | 7.1:+76057624 | MS.gene061401:CDS |
TCTGATAGGACGAGTCGGCA+TGG | 0.607176 | 7.1:-76049295 | None:intergenic |
GAATCTCTGATTGGGGCGAG+CGG | 0.607461 | 7.1:-76057691 | None:intergenic |
CTTATGGCTGGAATCACCGT+CGG | 0.610088 | 7.1:+76049504 | MS.gene061401:CDS |
GTTTGAAACCAGGATCTGAA+AGG | 0.611199 | 7.1:+76057551 | MS.gene061401:CDS |
TGAGTTGGATTCAAATCAAG+AGG | 0.613832 | 7.1:+76053850 | MS.gene061401:CDS |
ACGAGTCGGCATGGTTGCGG+CGG | 0.615772 | 7.1:-76049286 | None:intergenic |
CAGTGAGTTATACACTGAGT+TGG | 0.621535 | 7.1:+76051162 | MS.gene061401:CDS |
GGAGTAACTGTGTGATGCGA+AGG | 0.621994 | 7.1:-76049253 | None:intergenic |
ACTTAGAGTCTGGTAATGGA+AGG | 0.627384 | 7.1:+76057665 | MS.gene061401:CDS |
TAAAGCCAGAGATTACTGAA+TGG | 0.630729 | 7.1:-76051649 | None:intergenic |
CCAAAACTACTGCTGTAAGA+GGG | 0.632001 | 7.1:-76052620 | None:intergenic |
ACTGATCCCATTACAAAAGG+AGG | 0.633231 | 7.1:-76052442 | None:intergenic |
CAAATAGACTTACCAATGTG+AGG | 0.637761 | 7.1:-76056203 | None:intergenic |
TTGGAACAGAAAATTTGGGT+AGG | 0.644767 | 7.1:-76053617 | None:intergenic |
GAAAATTTGGGTAGGCCCTG+AGG | 0.645374 | 7.1:-76053609 | None:intergenic |
CGAAGCTTCGAGGAATGACG+TGG | 0.648981 | 7.1:+76049403 | MS.gene061401:CDS |
TCCATTACCAGACTCTAAGT+CGG | 0.651725 | 7.1:-76057662 | None:intergenic |
ATGACTCTGATAGGACGAGT+CGG | 0.664873 | 7.1:-76049300 | None:intergenic |
GAGTCAGCAAATCCTCACAT+TGG | 0.669367 | 7.1:+76056191 | MS.gene061401:CDS |
GGAGTCGGTAGGAATTGCAA+AGG | 0.669537 | 7.1:+76053805 | MS.gene061401:intron |
AACAGCGCTAGAGTCTATGT+AGG | 0.678411 | 7.1:-76057242 | None:intergenic |
ACTTCTAGTCATGAAACACC+TGG | 0.684072 | 7.1:+76052477 | MS.gene061401:CDS |
TAGGTGGGAGAGATACCTCA+GGG | 0.692099 | 7.1:+76053594 | MS.gene061401:intron |
TTACGCCAATCTCAATACCA+AGG | 0.707381 | 7.1:-76056056 | None:intergenic |
AGGAACGAGCATAACACCGA+CGG | 0.708061 | 7.1:-76049520 | None:intergenic |
GTTGATAGTTCTACAAGACG+TGG | 0.718335 | 7.1:+76056638 | MS.gene061401:CDS |
AATTACAGCAGAGATCACGA+TGG | 0.799009 | 7.1:-76055216 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 76049228 | 76057747 | 76049228 | ID=MS.gene061401 |
chr7.1 | mRNA | 76049228 | 76057747 | 76049228 | ID=MS.gene061401.t1;Parent=MS.gene061401 |
chr7.1 | exon | 76049228 | 76049545 | 76049228 | ID=MS.gene061401.t1.exon1;Parent=MS.gene061401.t1 |
chr7.1 | CDS | 76049228 | 76049545 | 76049228 | ID=cds.MS.gene061401.t1;Parent=MS.gene061401.t1 |
chr7.1 | exon | 76049880 | 76049928 | 76049880 | ID=MS.gene061401.t1.exon2;Parent=MS.gene061401.t1 |
chr7.1 | CDS | 76049880 | 76049928 | 76049880 | ID=cds.MS.gene061401.t1;Parent=MS.gene061401.t1 |
chr7.1 | exon | 76051038 | 76051239 | 76051038 | ID=MS.gene061401.t1.exon3;Parent=MS.gene061401.t1 |
chr7.1 | CDS | 76051038 | 76051239 | 76051038 | ID=cds.MS.gene061401.t1;Parent=MS.gene061401.t1 |
chr7.1 | exon | 76051622 | 76051790 | 76051622 | ID=MS.gene061401.t1.exon4;Parent=MS.gene061401.t1 |
chr7.1 | CDS | 76051622 | 76051790 | 76051622 | ID=cds.MS.gene061401.t1;Parent=MS.gene061401.t1 |
chr7.1 | exon | 76052433 | 76052498 | 76052433 | ID=MS.gene061401.t1.exon5;Parent=MS.gene061401.t1 |
chr7.1 | CDS | 76052433 | 76052498 | 76052433 | ID=cds.MS.gene061401.t1;Parent=MS.gene061401.t1 |
chr7.1 | exon | 76052579 | 76052686 | 76052579 | ID=MS.gene061401.t1.exon6;Parent=MS.gene061401.t1 |
chr7.1 | CDS | 76052579 | 76052686 | 76052579 | ID=cds.MS.gene061401.t1;Parent=MS.gene061401.t1 |
chr7.1 | exon | 76053597 | 76053704 | 76053597 | ID=MS.gene061401.t1.exon7;Parent=MS.gene061401.t1 |
chr7.1 | CDS | 76053597 | 76053704 | 76053597 | ID=cds.MS.gene061401.t1;Parent=MS.gene061401.t1 |
chr7.1 | exon | 76053806 | 76053871 | 76053806 | ID=MS.gene061401.t1.exon8;Parent=MS.gene061401.t1 |
chr7.1 | CDS | 76053806 | 76053871 | 76053806 | ID=cds.MS.gene061401.t1;Parent=MS.gene061401.t1 |
chr7.1 | exon | 76054219 | 76054279 | 76054219 | ID=MS.gene061401.t1.exon9;Parent=MS.gene061401.t1 |
chr7.1 | CDS | 76054219 | 76054279 | 76054219 | ID=cds.MS.gene061401.t1;Parent=MS.gene061401.t1 |
chr7.1 | exon | 76054430 | 76054557 | 76054430 | ID=MS.gene061401.t1.exon10;Parent=MS.gene061401.t1 |
chr7.1 | CDS | 76054430 | 76054557 | 76054430 | ID=cds.MS.gene061401.t1;Parent=MS.gene061401.t1 |
chr7.1 | exon | 76055203 | 76055244 | 76055203 | ID=MS.gene061401.t1.exon11;Parent=MS.gene061401.t1 |
chr7.1 | CDS | 76055203 | 76055244 | 76055203 | ID=cds.MS.gene061401.t1;Parent=MS.gene061401.t1 |
chr7.1 | exon | 76055970 | 76056086 | 76055970 | ID=MS.gene061401.t1.exon12;Parent=MS.gene061401.t1 |
chr7.1 | CDS | 76055970 | 76056086 | 76055970 | ID=cds.MS.gene061401.t1;Parent=MS.gene061401.t1 |
chr7.1 | exon | 76056161 | 76056212 | 76056161 | ID=MS.gene061401.t1.exon13;Parent=MS.gene061401.t1 |
chr7.1 | CDS | 76056161 | 76056212 | 76056161 | ID=cds.MS.gene061401.t1;Parent=MS.gene061401.t1 |
chr7.1 | exon | 76056399 | 76056537 | 76056399 | ID=MS.gene061401.t1.exon14;Parent=MS.gene061401.t1 |
chr7.1 | CDS | 76056399 | 76056537 | 76056399 | ID=cds.MS.gene061401.t1;Parent=MS.gene061401.t1 |
chr7.1 | exon | 76056616 | 76056704 | 76056616 | ID=MS.gene061401.t1.exon15;Parent=MS.gene061401.t1 |
chr7.1 | CDS | 76056616 | 76056704 | 76056616 | ID=cds.MS.gene061401.t1;Parent=MS.gene061401.t1 |
chr7.1 | exon | 76057236 | 76057312 | 76057236 | ID=MS.gene061401.t1.exon16;Parent=MS.gene061401.t1 |
chr7.1 | CDS | 76057236 | 76057312 | 76057236 | ID=cds.MS.gene061401.t1;Parent=MS.gene061401.t1 |
chr7.1 | exon | 76057418 | 76057747 | 76057418 | ID=MS.gene061401.t1.exon17;Parent=MS.gene061401.t1 |
chr7.1 | CDS | 76057418 | 76057747 | 76057418 | ID=cds.MS.gene061401.t1;Parent=MS.gene061401.t1 |
Gene Sequence |
Protein sequence |