AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene50542

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50542.t1 MTR_1g071530 98.628 656 9 0 1 656 1 656 0.0 1336
MS.gene50542.t1 MTR_7g095430 83.308 659 104 4 1 656 1 656 0.0 1095
MS.gene50542.t1 MTR_7g095430 86.387 573 75 3 1 573 1 570 0.0 985
MS.gene50542.t1 MTR_2g102243 57.387 643 274 0 3 645 5 647 0.0 769
MS.gene50542.t1 MTR_4g084620 55.864 648 281 3 4 649 1 645 0.0 753
MS.gene50542.t1 MTR_5g061880 55.112 626 280 1 21 645 30 655 0.0 747
MS.gene50542.t1 MTR_4g084640 55.590 644 276 2 10 645 3 644 0.0 745
MS.gene50542.t1 MTR_4g011970 56.230 626 274 0 20 645 29 654 0.0 737
MS.gene50542.t1 MTR_2g102243 58.261 575 240 0 3 577 5 579 0.0 709
MS.gene50542.t1 MTR_6g086170 52.194 638 298 4 15 649 3 636 0.0 702
MS.gene50542.t1 MTR_3g073780 54.299 628 283 3 21 645 33 659 0.0 701
MS.gene50542.t1 MTR_2g008470 53.409 616 285 2 20 634 53 667 0.0 674
MS.gene50542.t1 MTR_2g008470 53.409 616 285 2 20 634 34 648 0.0 674
MS.gene50542.t1 MTR_3g073780 55.315 555 244 3 21 572 33 586 0.0 642
MS.gene50542.t1 MTR_3g073780 56.357 527 227 2 21 544 33 559 0.0 623
MS.gene50542.t1 MTR_5g061860 47.191 623 316 5 26 637 26 646 0.0 583
MS.gene50542.t1 MTR_3g087740 46.591 616 323 5 27 638 37 650 0.0 575
MS.gene50542.t1 MTR_3g073730 44.099 644 344 5 2 637 17 652 0.0 547
MS.gene50542.t1 MTR_5g061860 48.302 530 262 4 26 544 26 554 1.33e-174 509
MS.gene50542.t1 MTR_3g087730 38.782 624 362 9 27 636 34 651 8.19e-153 457
MS.gene50542.t1 MTR_7g022870 36.222 577 354 7 65 637 70 636 1.70e-128 395
MS.gene50542.t1 MTR_7g022870 37.305 512 307 7 65 572 70 571 1.31e-113 353
MS.gene50542.t1 MTR_6g024420 29.801 151 85 4 202 352 35 164 2.50e-15 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50542.t1 AT3G51895 74.394 660 163 4 1 656 1 658 0.0 1018
MS.gene50542.t1 AT3G51895 74.394 660 163 4 1 656 46 703 0.0 1018
MS.gene50542.t1 AT4G02700 69.702 637 192 1 21 656 10 646 0.0 922
MS.gene50542.t1 AT3G15990 57.030 633 271 1 12 644 19 650 0.0 749
MS.gene50542.t1 AT1G23090 57.005 621 266 1 20 639 3 623 0.0 747
MS.gene50542.t1 AT4G08620 55.049 614 275 1 26 638 28 641 0.0 685
MS.gene50542.t1 AT5G19600 52.548 628 282 4 21 644 15 630 0.0 681
MS.gene50542.t1 AT1G78000 54.560 625 283 1 14 637 21 645 0.0 677
MS.gene50542.t1 AT1G78000 54.560 625 283 1 14 637 21 645 0.0 677
MS.gene50542.t1 AT1G78000 54.560 625 283 1 14 637 21 645 0.0 677
MS.gene50542.t1 AT1G22150 52.742 620 292 1 20 638 30 649 0.0 669
MS.gene50542.t1 AT1G22150 52.742 620 292 1 20 638 30 649 0.0 669
MS.gene50542.t1 AT1G22150 52.742 620 292 1 20 638 30 649 0.0 669
MS.gene50542.t1 AT1G78000 54.514 587 266 1 14 599 21 607 0.0 640
MS.gene50542.t1 AT1G78000 55.000 560 251 1 14 572 21 580 0.0 614
MS.gene50542.t1 AT1G22150 53.430 554 257 1 20 572 30 583 0.0 610
MS.gene50542.t1 AT5G10180 48.701 616 309 6 27 637 59 672 0.0 587
MS.gene50542.t1 AT1G23090 55.193 491 219 1 150 639 1 491 0.0 563
MS.gene50542.t1 AT1G23090 55.193 491 219 1 150 639 1 491 0.0 563
MS.gene50542.t1 AT1G23090 55.193 491 219 1 150 639 1 491 0.0 563
MS.gene50542.t1 AT1G77990 48.616 578 286 4 65 634 89 663 0.0 550
MS.gene50542.t1 AT1G78000 56.051 471 206 1 14 483 21 491 2.20e-176 512
MS.gene50542.t1 AT1G78000 53.933 445 204 1 129 572 1 445 8.72e-162 473
MS.gene50542.t1 AT3G12520 37.435 577 339 9 69 637 51 613 1.56e-126 389
MS.gene50542.t1 AT3G12520 37.435 577 339 9 69 637 67 629 2.93e-126 389
MS.gene50542.t1 AT5G13550 36.174 622 361 12 24 637 49 642 6.79e-125 385
MS.gene50542.t1 AT3G12520 39.085 481 276 7 69 544 67 535 6.33e-109 339

Find 140 sgRNAs with CRISPR-Local

Find 384 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTGTATATTACAGAATT+TGG 0.105263 1.2:+54768350 None:intergenic
ACCCTCTGATTCATCTCTTT+TGG 0.151425 1.2:+54767623 None:intergenic
TGGAGGAAGGTTGGCAAGTT+TGG 0.241408 1.2:+54774123 None:intergenic
GCCAACCTTCCTCCAATTCT+TGG 0.242711 1.2:-54774115 MS.gene50542:CDS
AGAAACAACCGAGGTTCTTT+TGG 0.253280 1.2:-54771170 MS.gene50542:CDS
CAGCAGCTGAAATCAATTCT+AGG 0.258743 1.2:-54772116 MS.gene50542:CDS
CGTCTGCATTAGCGCATATA+TGG 0.260758 1.2:-54768566 MS.gene50542:CDS
GCTTGGTGCCCATTCAAATA+TGG 0.263411 1.2:+54774228 None:intergenic
CCGAATGCAAATCGTGTTTC+CGG 0.263737 1.2:-54768314 MS.gene50542:CDS
TTCTTCATCACCTCACTTCC+AGG 0.268686 1.2:+54767747 None:intergenic
GCCGTTGGCGTCCGTTATAC+TGG 0.273981 1.2:-54771133 MS.gene50542:CDS
CTTGCATTGGCAAAGTAAAT+TGG 0.276343 1.2:+54768266 None:intergenic
AAGCTTCATTGGGTCTCTTT+AGG 0.281055 1.2:-54773019 MS.gene50542:intron
AAGGCCAAGGACATTTGTTT+TGG 0.282863 1.2:-54768381 MS.gene50542:CDS
GTCTTTGGCAGTGTTGAAAT+TGG 0.299924 1.2:-54768538 MS.gene50542:CDS
GCATATATGGGCGTTGTCTT+TGG 0.305788 1.2:-54768553 MS.gene50542:CDS
AATTTCCTCCTACATCCTTT+TGG 0.307255 1.2:+54767706 None:intergenic
AAAAGGATGTAGGAGGAAAT+TGG 0.320530 1.2:-54767704 MS.gene50542:CDS
CCTATGATTACAGCTTGTTT+TGG 0.325648 1.2:-54767775 MS.gene50542:intron
CTGTCACATGCAGCCATAGT+AGG 0.326137 1.2:-54772173 MS.gene50542:CDS
TTCACGGCCGAACGCGAAAA+TGG 0.329931 1.2:+54768787 None:intergenic
GATGGGTAGTTCAAGGGATT+TGG 0.335800 1.2:-54773171 MS.gene50542:CDS
TTCACAGCTACATTCTTTGC+TGG 0.345288 1.2:-54773050 MS.gene50542:CDS
GAGCTATAATGCCAACAATA+AGG 0.345823 1.2:+54770084 None:intergenic
AACCTCCTCAATGGATCATC+TGG 0.355664 1.2:+54774304 None:intergenic
AAGCATTGCAGATACAATTA+TGG 0.359813 1.2:+54768648 None:intergenic
TTGATAGCTGTGGTCATATA+TGG 0.367436 1.2:+54770113 None:intergenic
CTATGATGATTACCCTTGTT+CGG 0.380140 1.2:-54774422 MS.gene50542:CDS
ACCGTTAATTTATGCAATGA+TGG 0.385050 1.2:-54773189 MS.gene50542:CDS
TCCACCATCACTCACAGATT+TGG 0.390915 1.2:-54770147 MS.gene50542:CDS
AACAAAGAGATGATAGCTAT+TGG 0.397146 1.2:-54768953 MS.gene50542:CDS
TATGATGATTACCCTTGTTC+GGG 0.398340 1.2:-54774421 MS.gene50542:CDS
CCCATCATTGCATAAATTAA+CGG 0.402423 1.2:+54773188 None:intergenic
AACTCACATAGTCCAAGAAT+TGG 0.411726 1.2:+54774103 None:intergenic
ACCTCTTGCTACCTCACAAC+TGG 0.412059 1.2:-54768905 MS.gene50542:intron
GAAGACAGAATTAAAGATAC+AGG 0.413818 1.2:-54768099 MS.gene50542:CDS
TTTGGTTATTGCAGTGGAGG+TGG 0.420288 1.2:-54771768 MS.gene50542:intron
TCCTCCCATGAACCCTACTA+TGG 0.424696 1.2:+54772160 None:intergenic
ATGACCACAGCTATCAAAAC+TGG 0.429051 1.2:-54770107 MS.gene50542:CDS
GTCTGCATTAGCGCATATAT+GGG 0.430147 1.2:-54768565 MS.gene50542:CDS
CGTTATACTGGGAAGTGTGC+TGG 0.431245 1.2:-54771121 MS.gene50542:CDS
ATCAAAACTGGCCTTATTGT+TGG 0.431517 1.2:-54770095 MS.gene50542:CDS
AATCTTTAGAATTAGAATTC+CGG 0.433702 1.2:+54768295 None:intergenic
GGCAGTTGGATCTCTTCTGA+TGG 0.434035 1.2:-54773135 MS.gene50542:CDS
TGCAGCCATAGTAGGGTTCA+TGG 0.439490 1.2:-54772165 MS.gene50542:CDS
CTTGGTGCCCATTCAAATAT+GGG 0.439545 1.2:+54774229 None:intergenic
TTTGTTCTATTACACTCCTC+TGG 0.447769 1.2:-54768683 MS.gene50542:CDS
GAAAGAACCAACTATGTTCA+TGG 0.448133 1.2:+54768928 None:intergenic
AGTTCAAGGGATTTGGCAGT+TGG 0.456451 1.2:-54773164 MS.gene50542:CDS
TTGGGTAGGATTAACCTCAT+TGG 0.460340 1.2:+54773100 None:intergenic
TGGCATCACTATTGCTAGCT+TGG 0.462798 1.2:-54774170 MS.gene50542:CDS
CACTTGAACACCGTGGTGCT+CGG 0.463889 1.2:+54771083 None:intergenic
TCTTCTGATGGGTTCCATGT+TGG 0.465867 1.2:-54773123 MS.gene50542:CDS
CCGGAAACACGATTTGCATT+CGG 0.466507 1.2:+54768314 None:intergenic
GCATCCAGCATTATAGTTCA+CGG 0.466809 1.2:+54768771 None:intergenic
TACTATTTGTTGCAAGGCCA+AGG 0.467032 1.2:-54768394 MS.gene50542:CDS
ATTGGAACCATGAACATAGT+TGG 0.470036 1.2:-54768935 MS.gene50542:CDS
ATGCAATGATGGGTAGTTCA+AGG 0.474788 1.2:-54773178 MS.gene50542:CDS
AGGTGGGAAAGCGCTGTGTT+GGG 0.476059 1.2:-54771751 MS.gene50542:CDS
CTCTCTTAAATAGCTTGCAT+TGG 0.477563 1.2:+54768253 None:intergenic
CAGATAGGAGAATTGAAGAA+AGG 0.483632 1.2:-54770176 MS.gene50542:CDS
TGATTCTTAAACCTCCTCAA+TGG 0.483943 1.2:+54774295 None:intergenic
ATGAAGCAGCCATCCATCTC+TGG 0.484288 1.2:-54768612 MS.gene50542:CDS
TTGGTTATTGCAGTGGAGGT+GGG 0.486649 1.2:-54771767 MS.gene50542:intron
AGGTTGCAATATCAGTGCTT+CGG 0.492752 1.2:-54768421 MS.gene50542:CDS
CTACTATGGCTGCATGTGAC+AGG 0.495854 1.2:+54772174 None:intergenic
GCAGTTGGATCTCTTCTGAT+GGG 0.498638 1.2:-54773134 MS.gene50542:CDS
TTTCCCAAAACAAATGTCCT+TGG 0.500266 1.2:+54768377 None:intergenic
ATAATTGTATCTGCAATGCT+TGG 0.501731 1.2:-54768646 MS.gene50542:CDS
CAACAAATCCAGCTTCCAAA+AGG 0.505659 1.2:-54767721 MS.gene50542:CDS
TTGAAATCTGATCTCATAGC+TGG 0.511965 1.2:-54774190 MS.gene50542:CDS
TGCAATGATGGGTAGTTCAA+GGG 0.512364 1.2:-54773177 MS.gene50542:CDS
GCAGTTGGAACTGTGGCAGT+TGG 0.515482 1.2:-54773149 MS.gene50542:CDS
CCGTTGGCGTCCGTTATACT+GGG 0.520515 1.2:-54771132 MS.gene50542:CDS
ATTTGTCAATCTTCCAGAGA+TGG 0.520606 1.2:+54768599 None:intergenic
TGTTGGCATTATAGCTCTTG+CGG 0.529365 1.2:-54770078 MS.gene50542:intron
GAGGTGGGAAAGCGCTGTGT+TGG 0.531070 1.2:-54771752 MS.gene50542:CDS
TCCAAGAATTGGAGGAAGGT+TGG 0.531977 1.2:+54774114 None:intergenic
TGTCACATGCAGCCATAGTA+GGG 0.533525 1.2:-54772172 MS.gene50542:CDS
CCGTTAATTTATGCAATGAT+GGG 0.538397 1.2:-54773188 MS.gene50542:CDS
TGCAATTGACATCACAATGT+TGG 0.540759 1.2:+54768735 None:intergenic
AAGAACTGAAAAGTGTAGCT+TGG 0.541491 1.2:+54774211 None:intergenic
GGTGTCAGCAATGACGCCGT+TGG 0.542147 1.2:-54771148 MS.gene50542:CDS
CAGCACACTTCCCAGTATAA+CGG 0.546747 1.2:+54771122 None:intergenic
GGTTACTACTATTTGTTGCA+AGG 0.547106 1.2:-54768400 MS.gene50542:CDS
TCACATAGTCCAAGAATTGG+AGG 0.548928 1.2:+54774106 None:intergenic
TCGGCCGTGAACTATAATGC+TGG 0.554904 1.2:-54768775 MS.gene50542:CDS
AAAGAGATGAATCAGAGGGT+TGG 0.561882 1.2:-54767620 MS.gene50542:CDS
ATTAACCTCATTGGCCAACA+TGG 0.564213 1.2:+54773109 None:intergenic
GCAGCCATAGTAGGGTTCAT+GGG 0.565129 1.2:-54772164 MS.gene50542:CDS
ACCAAATCTGTGAGTGATGG+TGG 0.568879 1.2:+54770146 None:intergenic
TCTTTCCAGATGATCCATTG+AGG 0.569076 1.2:-54774309 MS.gene50542:CDS
GTTGGAAATATTGATACAAG+TGG 0.570042 1.2:-54767947 MS.gene50542:CDS
TCAACGTTCATACCCGAACA+AGG 0.579824 1.2:+54774409 None:intergenic
CTCAAGGTGGATCGATGAAG+AGG 0.580742 1.2:-54768121 MS.gene50542:CDS
TTATTGTTCATAGGATCTCA+AGG 0.585365 1.2:-54768137 MS.gene50542:intron
CGGATACGATATCAGCAGCA+TGG 0.585791 1.2:+54772078 None:intergenic
GGATACGATATCAGCAGCAT+GGG 0.586482 1.2:+54772079 None:intergenic
GCTAGCTTGGCTATTCCTCA+AGG 0.586902 1.2:-54774157 MS.gene50542:CDS
GTCAATCTTCCAGAGATGGA+TGG 0.590877 1.2:+54768603 None:intergenic
GGGTTCCATGTTGGCCAATG+AGG 0.591059 1.2:-54773114 MS.gene50542:CDS
GTTCTATTACACTCCTCTGG+TGG 0.592713 1.2:-54768680 MS.gene50542:CDS
TTCCAGATGATCCATTGAGG+AGG 0.598956 1.2:-54774306 MS.gene50542:CDS
TTTCAGGAAGGAATAGCTGT+GGG 0.600243 1.2:-54769016 MS.gene50542:intron
CGAGCACCACGGTGTTCAAG+TGG 0.600656 1.2:-54771082 MS.gene50542:intron
AGAATGTAGCTGTGAAAGCA+AGG 0.605756 1.2:+54773057 None:intergenic
GGATTTGGCAGTTGGAACTG+TGG 0.605836 1.2:-54773156 MS.gene50542:CDS
AAGACAGAATTAAAGATACA+GGG 0.609710 1.2:-54768098 MS.gene50542:CDS
TCCAGCTTCCAAAAGGATGT+AGG 0.611724 1.2:-54767714 MS.gene50542:CDS
TCCCAAAAGAGATGAATCAG+AGG 0.611733 1.2:-54767625 MS.gene50542:CDS
ACCAGTTGTGAGGTAGCAAG+AGG 0.613006 1.2:+54768904 None:intergenic
CCCAGTATAACGGACGCCAA+CGG 0.613528 1.2:+54771132 None:intergenic
ATGCAAGCTATTTAAGAGAG+AGG 0.614022 1.2:-54768250 MS.gene50542:intron
GTGCAGGTTAGGGTTTATCG+TGG 0.617383 1.2:-54772201 MS.gene50542:intron
AGCTTCCAAAAGGATGTAGG+AGG 0.626533 1.2:-54767711 MS.gene50542:CDS
CATGGGAGGAGCAGCTACAG+TGG 0.630489 1.2:-54772147 MS.gene50542:CDS
CCCAAAAGAGATGAATCAGA+GGG 0.633313 1.2:-54767624 MS.gene50542:CDS
TTGGCATAGCTAATGCCTTG+AGG 0.644841 1.2:+54774142 None:intergenic
ATAGTCCAAGAATTGGAGGA+AGG 0.645921 1.2:+54774110 None:intergenic
TTTGGTCAATCCTGGAAGTG+AGG 0.652558 1.2:-54767757 MS.gene50542:CDS
GATGATGTTTACCAGTTGTG+AGG 0.653692 1.2:+54768894 None:intergenic
AACGTTGATGAGAGTGTGCA+TGG 0.657132 1.2:-54774394 MS.gene50542:CDS
TTGGTGCCCATTCAAATATG+GGG 0.657181 1.2:+54774230 None:intergenic
AGACAGAATTAAAGATACAG+GGG 0.658453 1.2:-54768097 MS.gene50542:CDS
TTCACTCACGCCGAGCACCA+CGG 0.668149 1.2:-54771093 MS.gene50542:CDS
AGAGGAGTGTAATAGAACAA+AGG 0.670114 1.2:+54768685 None:intergenic
AATACCAAATCTGTGAGTGA+TGG 0.675598 1.2:+54770143 None:intergenic
TTACGAAGTATCTTGTAACA+AGG 0.677468 1.2:+54771707 None:intergenic
ATCATTGCATAAATTAACGG+TGG 0.681126 1.2:+54773191 None:intergenic
GCTGACACCCAAAAGAACCT+CGG 0.684039 1.2:+54771162 None:intergenic
GCCATAGTAGGGTTCATGGG+AGG 0.684143 1.2:-54772161 MS.gene50542:CDS
TGATGAGAGTGTGCATGGTG+TGG 0.685946 1.2:-54774389 MS.gene50542:CDS
CAACGTTCATACCCGAACAA+GGG 0.694687 1.2:+54774410 None:intergenic
TATGTTATACTGGATATGAG+TGG 0.705748 1.2:-54768060 MS.gene50542:intron
AAATTGGATCTATCTGACAG+TGG 0.706142 1.2:-54767688 MS.gene50542:CDS
ATGGCTGCTAGTACCACCAG+AGG 0.717575 1.2:+54768667 None:intergenic
ATGTAGCTGTGAAAGCAAGG+TGG 0.720087 1.2:+54773060 None:intergenic
TGCAGAGCAAGAAACAACCG+AGG 0.739760 1.2:-54771179 MS.gene50542:intron
TTGTTCATAGGATCTCAAGG+TGG 0.742236 1.2:-54768134 MS.gene50542:intron
TGCTCACCACTTGAACACCG+TGG 0.755603 1.2:+54771076 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAATAATTGCAATAT+GGG - chr1.2:54769168-54769187 MS.gene50542:intron 10.0%
!! AATAAGCTATAAAAAATATT+TGG + chr1.2:54774211-54774230 None:intergenic 10.0%
!! AATTAAATTATTCTGAATTA+AGG - chr1.2:54769340-54769359 MS.gene50542:intron 10.0%
!! TAAATAAAATAATTGCAATA+TGG - chr1.2:54769167-54769186 MS.gene50542:intron 10.0%
!! TAATAATGTAATAGTAATAT+GGG + chr1.2:54769312-54769331 None:intergenic 10.0%
!! TATAAAAATTATCATATTGA+TGG - chr1.2:54773067-54773086 MS.gene50542:CDS 10.0%
!! TATGTTTGTTTATATAAAAT+AGG + chr1.2:54770177-54770196 None:intergenic 10.0%
!! TTAACAAAAAAATAAATACT+TGG - chr1.2:54769379-54769398 MS.gene50542:intron 10.0%
!!! AAAAAAAAAAAAAAAGGTTT+TGG - chr1.2:54772547-54772566 MS.gene50542:intron 10.0%
!!! AAATATATTATTTTGCTAAT+TGG + chr1.2:54768617-54768636 None:intergenic 10.0%
!!! AAATTAATTTAACTTGAAAT+TGG - chr1.2:54770807-54770826 MS.gene50542:intron 10.0%
!!! ACTAGTTTATATATTTTTTT+GGG - chr1.2:54768552-54768571 MS.gene50542:CDS 10.0%
!!! ATAAATATATACCATTTTTT+TGG - chr1.2:54767996-54768015 MS.gene50542:intron 10.0%
!!! GACTAATATATATTATTTTT+TGG - chr1.2:54771816-54771835 MS.gene50542:intron 10.0%
!!! TAAGTAAAAATAATAGTTTT+TGG + chr1.2:54768265-54768284 None:intergenic 10.0%
!! ATCAATAATATTTAAGGAAA+GGG + chr1.2:54769783-54769802 None:intergenic 15.0%
!! ATTTAGTAAAACCAAAAAAA+TGG + chr1.2:54768010-54768029 None:intergenic 15.0%
!! CACATAAAAATTAATCTAAT+CGG + chr1.2:54770999-54771018 None:intergenic 15.0%
!! CTCTCAAAAAAAAAAAAAAA+AGG - chr1.2:54772541-54772560 MS.gene50542:intron 15.0%
!! GTAATAATGTAATAGTAATA+TGG + chr1.2:54769313-54769332 None:intergenic 15.0%
!! TAGATGTTTATAGAAATTAT+GGG - chr1.2:54770570-54770589 MS.gene50542:intron 15.0%
!! TATTACATATGACATTTAAT+TGG + chr1.2:54772940-54772959 None:intergenic 15.0%
!!! AATTTTGAATTATGTTATAC+TGG - chr1.2:54773974-54773993 MS.gene50542:intron 15.0%
!!! ACTGTTTTTTAAAAACAAAA+TGG - chr1.2:54772665-54772684 MS.gene50542:intron 15.0%
!!! ATTCTTTTAATTATATCATG+AGG - chr1.2:54772872-54772891 MS.gene50542:intron 15.0%
!!! CTGTTTTTTAAAAACAAAAT+GGG - chr1.2:54772666-54772685 MS.gene50542:intron 15.0%
!!! GACTAGTTTATATATTTTTT+TGG - chr1.2:54768551-54768570 MS.gene50542:CDS 15.0%
!!! GCTTTTGTATAAAATTATAT+AGG + chr1.2:54772364-54772383 None:intergenic 15.0%
!!! TAGCAACAAAATATTTTTTA+TGG + chr1.2:54768508-54768527 None:intergenic 15.0%
!!! TCTTTTAAATGTAAATAAAG+AGG + chr1.2:54772392-54772411 None:intergenic 15.0%
!!! TTTTAAAAAACAGTAGTATA+AGG + chr1.2:54772659-54772678 None:intergenic 15.0%
!! AATATGATAAGTATTCGATA+AGG + chr1.2:54772848-54772867 None:intergenic 20.0%
!! ATAAAAATGATAACTCTTTC+AGG - chr1.2:54773233-54773252 MS.gene50542:intron 20.0%
!! ATAAGAATACTCATTGAATA+TGG + chr1.2:54771491-54771510 None:intergenic 20.0%
!! ATAGGAATGAAAAGATTTAA+AGG + chr1.2:54774254-54774273 None:intergenic 20.0%
!! CATCAATAATATTTAAGGAA+AGG + chr1.2:54769784-54769803 None:intergenic 20.0%
!! CTAGATGTTTATAGAAATTA+TGG - chr1.2:54770569-54770588 MS.gene50542:intron 20.0%
!! GTCATTAAATACAAAACAAT+AGG - chr1.2:54772507-54772526 MS.gene50542:intron 20.0%
!! GTTTGCATATAAATATTTAC+AGG + chr1.2:54771089-54771108 None:intergenic 20.0%
!! TAAAAATGATAACTCTTTCA+GGG - chr1.2:54773234-54773253 MS.gene50542:intron 20.0%
!! TAAGAATACTCATTGAATAT+GGG + chr1.2:54771490-54771509 None:intergenic 20.0%
!! TAGTTAATGTAGATTTCAAT+AGG - chr1.2:54772984-54773003 MS.gene50542:intron 20.0%
!! TATATGAAAGTTATTTGTAG+TGG - chr1.2:54772576-54772595 MS.gene50542:intron 20.0%
!! TTAACTAAATTAGCATATCT+AGG + chr1.2:54772971-54772990 None:intergenic 20.0%
!! TTATCTTATATACATGACAT+CGG - chr1.2:54771761-54771780 MS.gene50542:intron 20.0%
!! TTTCTGTATATTACAGAATT+TGG + chr1.2:54773697-54773716 None:intergenic 20.0%
!!! AATCTTTAGAATTAGAATTC+CGG + chr1.2:54773752-54773771 None:intergenic 20.0%
!!! ATACTTTGAAATCTATGAAA+TGG - chr1.2:54772895-54772914 MS.gene50542:intron 20.0%
!!! ATATTTCTTTTTAACTCGTT+TGG - chr1.2:54768302-54768321 MS.gene50542:CDS 20.0%
!!! ATTAATGATCATTTTAGAAC+CGG - chr1.2:54772719-54772738 MS.gene50542:intron 20.0%
!!! CAATTAAATTTGTTATTTGC+CGG - chr1.2:54769659-54769678 MS.gene50542:intron 20.0%
!!! GATTAATTTTTATGTGTTGA+CGG - chr1.2:54771003-54771022 MS.gene50542:intron 20.0%
!!! TAATAATACACTTTTAGACA+TGG - chr1.2:54772031-54772050 MS.gene50542:intron 20.0%
!!! TAATAATTTTCTCATAGAAC+CGG + chr1.2:54772741-54772760 None:intergenic 20.0%
!!! TAATGTGTTTTCTTATGTTT+AGG - chr1.2:54773603-54773622 MS.gene50542:intron 20.0%
!!! TAATTAGCAAGAAAAGTATA+TGG + chr1.2:54768731-54768750 None:intergenic 20.0%
!!! TAATTTTTTACTTTCCTTCA+AGG - chr1.2:54771323-54771342 MS.gene50542:intron 20.0%
!!! TATCATATTACTACTTTTGT+TGG - chr1.2:54771794-54771813 MS.gene50542:intron 20.0%
!!! TTATTTTGCTAATTGGTAAT+TGG + chr1.2:54768610-54768629 None:intergenic 20.0%
!!! TTGGTTTTACTAAATGAAAT+AGG - chr1.2:54768015-54768034 MS.gene50542:intron 20.0%
! AAGACAGAATTAAAGATACA+GGG - chr1.2:54773946-54773965 MS.gene50542:intron 25.0%
! AGAATATATATATCCTAACC+AGG - chr1.2:54769200-54769219 MS.gene50542:intron 25.0%
! AGTGTATTATTACGCAATAA+AGG + chr1.2:54772023-54772042 None:intergenic 25.0%
! AGTTTCATTTCATTCTTCTT+TGG + chr1.2:54772138-54772157 None:intergenic 25.0%
! ATAATTGCAATATGGGAAAA+AGG - chr1.2:54769175-54769194 MS.gene50542:intron 25.0%
! ATCGAAATAATTGTCAAATG+AGG + chr1.2:54772242-54772261 None:intergenic 25.0%
! ATGACATTTAATTGGAAGAA+AGG + chr1.2:54772932-54772951 None:intergenic 25.0%
! ATGATATGTTAGTATGTTAC+TGG - chr1.2:54769133-54769152 MS.gene50542:intron 25.0%
! ATTACCTAACACATATTCAT+TGG - chr1.2:54770362-54770381 MS.gene50542:intron 25.0%
! ATTCAAACTGGACATTAAAT+CGG - chr1.2:54768073-54768092 MS.gene50542:CDS 25.0%
! ATTCAATGAGTATTCTTATC+TGG - chr1.2:54771492-54771511 MS.gene50542:intron 25.0%
! ATTTCATTCTTCTTTGGTTA+AGG + chr1.2:54772132-54772151 None:intergenic 25.0%
! CCATGCATCAATAATATTTA+AGG + chr1.2:54769789-54769808 None:intergenic 25.0%
! CCTTAAATATTATTGATGCA+TGG - chr1.2:54769786-54769805 MS.gene50542:intron 25.0%
! CGGCAAATAACAAATTTAAT+TGG + chr1.2:54769661-54769680 None:intergenic 25.0%
! CTAGCATAATAATTAATGCA+AGG + chr1.2:54770548-54770567 None:intergenic 25.0%
! GTAATACTGATGTTAAGATT+TGG + chr1.2:54773180-54773199 None:intergenic 25.0%
! TACTTCATAGACTTCAAAAA+TGG + chr1.2:54767698-54767717 None:intergenic 25.0%
! TAGAAAAATGATTCATTTGC+AGG + chr1.2:54771523-54771542 None:intergenic 25.0%
! TATGGCAATTAATCAAAACA+TGG - chr1.2:54774027-54774046 MS.gene50542:intron 25.0%
! TATTTATTTGGTTATTGCAG+TGG - chr1.2:54770270-54770289 MS.gene50542:intron 25.0%
! TGAGGCAATAACTTTATTAT+TGG - chr1.2:54772169-54772188 MS.gene50542:CDS 25.0%
! TTTATATGCAAACAACAAGT+TGG - chr1.2:54771096-54771115 MS.gene50542:CDS 25.0%
!! AACTTGCAGTGTAATTTTAT+TGG - chr1.2:54774069-54774088 MS.gene50542:intron 25.0%
!! AAGGAAAAAAGCAAATTTTC+AGG + chr1.2:54773827-54773846 None:intergenic 25.0%
!! ATGTGTTTTCAAATTCAAAC+TGG - chr1.2:54768061-54768080 MS.gene50542:CDS 25.0%
!! GAAAAGTATATGGAAGAAAA+TGG + chr1.2:54768721-54768740 None:intergenic 25.0%
!! TTAGTCAGTCCTAAAATTTT+TGG + chr1.2:54768445-54768464 None:intergenic 25.0%
!!! ACAAGTTGGTTTGATTTAAT+CGG - chr1.2:54771110-54771129 MS.gene50542:CDS 25.0%
!!! ATTTTTTCCCCATATTTGAA+TGG - chr1.2:54767807-54767826 MS.gene50542:intron 25.0%
!!! ATTTTTTTGGGACATTGATA+TGG - chr1.2:54768564-54768583 MS.gene50542:CDS 25.0%
!!! TTTTTTCCCCATATTTGAAT+GGG - chr1.2:54767808-54767827 MS.gene50542:intron 25.0%
AAATCTTGTAGTAACAGCTA+TGG + chr1.2:54772620-54772639 None:intergenic 30.0%
AACAAAGAGATGATAGCTAT+TGG - chr1.2:54773091-54773110 MS.gene50542:CDS 30.0%
AATGAGTATTCTTATCTGGT+AGG - chr1.2:54771496-54771515 MS.gene50542:intron 30.0%
AATTCAAATTCTCTTGGAGT+CGG + chr1.2:54772779-54772798 None:intergenic 30.0%
ACAAGACAACACAAAAAGAA+GGG + chr1.2:54769238-54769257 None:intergenic 30.0%
ACAAGTTATAATAACGCATG+AGG - chr1.2:54769816-54769835 MS.gene50542:intron 30.0%
ACCGTTAATTTATGCAATGA+TGG - chr1.2:54768855-54768874 MS.gene50542:intron 30.0%
AGACAGAATTAAAGATACAG+GGG - chr1.2:54773947-54773966 MS.gene50542:intron 30.0%
AGGAAACTGTTATTGTTCAT+AGG - chr1.2:54773898-54773917 MS.gene50542:intron 30.0%
AGTTTGACCTTGTAATATCA+AGG + chr1.2:54772807-54772826 None:intergenic 30.0%
ATAATTGTATCTGCAATGCT+TGG - chr1.2:54773398-54773417 MS.gene50542:intron 30.0%
ATACTGATGTTAAGATTTGG+TGG + chr1.2:54773177-54773196 None:intergenic 30.0%
ATAGACTTCAAAAATGGTTG+AGG + chr1.2:54767692-54767711 None:intergenic 30.0%
ATCATTGCATAAATTAACGG+TGG + chr1.2:54768856-54768875 None:intergenic 30.0%
CCCATCATTGCATAAATTAA+CGG + chr1.2:54768859-54768878 None:intergenic 30.0%
CCGTTAATTTATGCAATGAT+GGG - chr1.2:54768856-54768875 MS.gene50542:intron 30.0%
GAAATAATTGTCAAATGAGG+AGG + chr1.2:54772239-54772258 None:intergenic 30.0%
GAAGACAGAATTAAAGATAC+AGG - chr1.2:54773945-54773964 MS.gene50542:intron 30.0%
GAATGAAATGAAACTAGACA+AGG - chr1.2:54772143-54772162 MS.gene50542:CDS 30.0%
GAGAAATAAGTGACAGATTT+GGG + chr1.2:54770526-54770545 None:intergenic 30.0%
GATTAATTGCCATATCTCAA+AGG + chr1.2:54774021-54774040 None:intergenic 30.0%
GGATGAAATTCAAATTCTCT+TGG + chr1.2:54772785-54772804 None:intergenic 30.0%
GGCAATAACTTTATTATTGG+TGG - chr1.2:54772172-54772191 MS.gene50542:CDS 30.0%
GTTGGAAATATTGATACAAG+TGG - chr1.2:54774097-54774116 MS.gene50542:intron 30.0%
GTTTGACCTTGTAATATCAA+GGG + chr1.2:54772806-54772825 None:intergenic 30.0%
TAAAATAGGTTTGACTAAGC+CGG + chr1.2:54770163-54770182 None:intergenic 30.0%
TATGCCAATGAATATGTGTT+AGG + chr1.2:54770369-54770388 None:intergenic 30.0%
TATGTTATACTGGATATGAG+TGG - chr1.2:54773984-54774003 MS.gene50542:intron 30.0%
TCTAGATAAATAGCAACGTT+CGG + chr1.2:54769601-54769620 None:intergenic 30.0%
TCTGAATTAAGGCATATACT+TGG - chr1.2:54769351-54769370 MS.gene50542:intron 30.0%
TGGTATTGTAATTGCCAAAT+TGG - chr1.2:54771836-54771855 MS.gene50542:intron 30.0%
TGTTAGTATGTTACTGGATA+TGG - chr1.2:54769139-54769158 MS.gene50542:intron 30.0%
TTATTGTTCATAGGATCTCA+AGG - chr1.2:54773907-54773926 MS.gene50542:intron 30.0%
TTCAATAGGATCTTGAATGT+TGG - chr1.2:54772998-54773017 MS.gene50542:intron 30.0%
TTGAATTGTGACTAGATGAA+TGG + chr1.2:54768179-54768198 None:intergenic 30.0%
TTTCATCCCTTGATATTACA+AGG - chr1.2:54772797-54772816 MS.gene50542:intron 30.0%
TTTGTCAAATGCTCATCATA+TGG - chr1.2:54772206-54772225 MS.gene50542:intron 30.0%
! AAGCATTGCAGATACAATTA+TGG + chr1.2:54773399-54773418 None:intergenic 30.0%
! AAGTCAACAAATTTTCTCAG+CGG - chr1.2:54770664-54770683 MS.gene50542:intron 30.0%
! ATTCTTTTAGCAAGTGTGAT+TGG - chr1.2:54769510-54769529 MS.gene50542:intron 30.0%
! CTTGCTGTGTAAATATCATT+TGG + chr1.2:54770472-54770491 None:intergenic 30.0%
! GAGAAAAAGCTTAGGATTTT+GGG + chr1.2:54768965-54768984 None:intergenic 30.0%
! TTACGAAGTATCTTGTAACA+AGG + chr1.2:54770340-54770359 None:intergenic 30.0%
! TTTTTCTACCTGATGAGTTT+GGG + chr1.2:54770010-54770029 None:intergenic 30.0%
!! ATAAAAGAGTTTGAGTTGAG+AGG + chr1.2:54771998-54772017 None:intergenic 30.0%
!!! TTGGTATAGACTCTTTTTTG+AGG + chr1.2:54768591-54768610 None:intergenic 30.0%
AAAAGGATGTAGGAGGAAAT+TGG - chr1.2:54774340-54774359 MS.gene50542:CDS 35.0%
AAACACTGTTGAGTGCTATA+GGG - chr1.2:54771449-54771468 MS.gene50542:intron 35.0%
AAATGCTCATCATATGGACA+TGG - chr1.2:54772212-54772231 MS.gene50542:intron 35.0%
AAATTGGATCTATCTGACAG+TGG - chr1.2:54774356-54774375 MS.gene50542:CDS 35.0%
AACTCACATAGTCCAAGAAT+TGG + chr1.2:54767944-54767963 None:intergenic 35.0%
AATTGGCACATGTTTCAGAT+AGG - chr1.2:54771853-54771872 MS.gene50542:intron 35.0%
ACATGTAACATGTGTACTCA+TGG + chr1.2:54771553-54771572 None:intergenic 35.0%
ACTTGAAATTGGAACTGCAA+CGG - chr1.2:54770818-54770837 MS.gene50542:intron 35.0%
AGATAATGCCCTAGAACTAT+TGG + chr1.2:54772330-54772349 None:intergenic 35.0%
AGTTATAATAACGCATGAGG+TGG - chr1.2:54769819-54769838 MS.gene50542:intron 35.0%
ATAAATAGCAACGTTCGGAA+AGG + chr1.2:54769596-54769615 None:intergenic 35.0%
ATGCAAGCTATTTAAGAGAG+AGG - chr1.2:54773794-54773813 MS.gene50542:intron 35.0%
ATTCAACTATAGTAAGCCTC+AGG - chr1.2:54768193-54768212 MS.gene50542:intron 35.0%
ATTGGAACCATGAACATAGT+TGG - chr1.2:54773109-54773128 MS.gene50542:CDS 35.0%
ATTTGTCAATCTTCCAGAGA+TGG + chr1.2:54773448-54773467 None:intergenic 35.0%
CACAAGACAACACAAAAAGA+AGG + chr1.2:54769239-54769258 None:intergenic 35.0%
CACATGCTAGAGAAAGAAAA+AGG + chr1.2:54773846-54773865 None:intergenic 35.0%
CAGATAGGAGAATTGAAGAA+AGG - chr1.2:54771868-54771887 MS.gene50542:intron 35.0%
CATGATTAGATCATCCTTGA+AGG + chr1.2:54771340-54771359 None:intergenic 35.0%
CATTGAATATGGGTGGTATT+CGG + chr1.2:54771480-54771499 None:intergenic 35.0%
CCAAAACAAGCTGTAATCAT+AGG + chr1.2:54774272-54774291 None:intergenic 35.0%
CTATGATGATTACCCTTGTT+CGG - chr1.2:54767622-54767641 MS.gene50542:CDS 35.0%
CTGATGAGTTTGGGTAAAAA+TGG + chr1.2:54770001-54770020 None:intergenic 35.0%
CTGGAATAATTTGACACACA+AGG - chr1.2:54773878-54773897 MS.gene50542:intron 35.0%
CTTATATACATGACATCGGA+AGG - chr1.2:54771765-54771784 MS.gene50542:intron 35.0%
CTTGTGTGTCAAATTATTCC+AGG + chr1.2:54773880-54773899 None:intergenic 35.0%
GAAAGAACCAACTATGTTCA+TGG + chr1.2:54773119-54773138 None:intergenic 35.0%
GAATACTCATTGAATATGGG+TGG + chr1.2:54771487-54771506 None:intergenic 35.0%
GAGCTATAATGCCAACAATA+AGG + chr1.2:54771963-54771982 None:intergenic 35.0%
GCTTGAAGAGACTAAAAAGA+TGG - chr1.2:54774129-54774148 MS.gene50542:CDS 35.0%
GGAGAAATAAGTGACAGATT+TGG + chr1.2:54770527-54770546 None:intergenic 35.0%
GTTATAATAACGCATGAGGT+GGG - chr1.2:54769820-54769839 MS.gene50542:intron 35.0%
TAAATAGCAACGTTCGGAAA+GGG + chr1.2:54769595-54769614 None:intergenic 35.0%
TAGTAATATGGGATGCGAAA+TGG + chr1.2:54769301-54769320 None:intergenic 35.0%
TATATACCAGACTGAGAAGT+AGG + chr1.2:54773571-54773590 None:intergenic 35.0%
TATGATGATTACCCTTGTTC+GGG - chr1.2:54767623-54767642 MS.gene50542:CDS 35.0%
TGACCTTTACCAATAGTTCT+AGG - chr1.2:54772318-54772337 MS.gene50542:intron 35.0%
TGATTCTTAAACCTCCTCAA+TGG + chr1.2:54767752-54767771 None:intergenic 35.0%
TGCAATTGACATCACAATGT+TGG + chr1.2:54773312-54773331 None:intergenic 35.0%
TTATAATAACGCATGAGGTG+GGG - chr1.2:54769821-54769840 MS.gene50542:intron 35.0%
TTATGACCTCATAGAAACCT+TGG + chr1.2:54772460-54772479 None:intergenic 35.0%
TTATTTGGTTATTGCAGTGG+AGG - chr1.2:54770273-54770292 MS.gene50542:intron 35.0%
TTCAACTATAGTAAGCCTCA+GGG - chr1.2:54768194-54768213 MS.gene50542:intron 35.0%
TTGAAATCTGATCTCATAGC+TGG - chr1.2:54767854-54767873 MS.gene50542:intron 35.0%
TTTCCCAAAACAAATGTCCT+TGG + chr1.2:54773670-54773689 None:intergenic 35.0%
TTTGTTCTATTACACTCCTC+TGG - chr1.2:54773361-54773380 MS.gene50542:intron 35.0%
! AAGAACTGAAAAGTGTAGCT+TGG + chr1.2:54767836-54767855 None:intergenic 35.0%
! AATTTCCTCCTACATCCTTT+TGG + chr1.2:54774341-54774360 None:intergenic 35.0%
! AGAGGAGTGTAATAGAACAA+AGG + chr1.2:54773362-54773381 None:intergenic 35.0%
! ATCTGAAACATGTGCCAATT+TGG + chr1.2:54771853-54771872 None:intergenic 35.0%
! CATTTTTACCCAAACTCATC+AGG - chr1.2:54769999-54770018 MS.gene50542:intron 35.0%
! CTCTAGCATGTGAAATTTTC+TGG - chr1.2:54773854-54773873 MS.gene50542:intron 35.0%
! CTCTCTTAAATAGCTTGCAT+TGG + chr1.2:54773794-54773813 None:intergenic 35.0%
! CTCTTCAACTTTGAGAAACT+TGG + chr1.2:54770108-54770127 None:intergenic 35.0%
! CTTGCATTGGCAAAGTAAAT+TGG + chr1.2:54773781-54773800 None:intergenic 35.0%
! GACCTTTACCAATAGTTCTA+GGG - chr1.2:54772319-54772338 MS.gene50542:intron 35.0%
! GAGGTAATGGTGTGTAATTA+AGG - chr1.2:54769691-54769710 MS.gene50542:intron 35.0%
! GGAGAAAAAGCTTAGGATTT+TGG + chr1.2:54768966-54768985 None:intergenic 35.0%
! GGTTACTACTATTTGTTGCA+AGG - chr1.2:54773644-54773663 MS.gene50542:intron 35.0%
! GTAATTTTATTGGCAGCTGT+TGG - chr1.2:54774079-54774098 MS.gene50542:intron 35.0%
! GTTTTTCTACCTGATGAGTT+TGG + chr1.2:54770011-54770030 None:intergenic 35.0%
! TCAAACCTATTTCTCTAGAG+CGG - chr1.2:54770073-54770092 MS.gene50542:intron 35.0%
! TCAACCAGCTTCTAAAAAGT+TGG - chr1.2:54767769-54767788 MS.gene50542:intron 35.0%
! TGTTATTTGCCGGAAATCAA+GGG - chr1.2:54769669-54769688 MS.gene50542:intron 35.0%
! TTGATAGCTGTGGTCATATA+TGG + chr1.2:54771934-54771953 None:intergenic 35.0%
!! AAAAGCTTAGGATTTTGGGT+AGG + chr1.2:54768961-54768980 None:intergenic 35.0%
!! ACAACTTTATTGATTCGTCC+CGG - chr1.2:54768416-54768435 MS.gene50542:CDS 35.0%
!! AGTAATGAGCCTTTGAGATA+TGG - chr1.2:54774009-54774028 MS.gene50542:intron 35.0%
!! ATCAAAACTGGCCTTATTGT+TGG - chr1.2:54771949-54771968 MS.gene50542:intron 35.0%
!! CCTATGATTACAGCTTGTTT+TGG - chr1.2:54774269-54774288 MS.gene50542:CDS 35.0%
!! TTGTTATTTGCCGGAAATCA+AGG - chr1.2:54769668-54769687 MS.gene50542:intron 35.0%
AAAGAGATGAATCAGAGGGT+TGG - chr1.2:54774424-54774443 MS.gene50542:CDS 40.0%
AAGCTTCATTGGGTCTCTTT+AGG - chr1.2:54769025-54769044 MS.gene50542:intron 40.0%
AATGGACGAATCTCATTGCA+TGG + chr1.2:54769283-54769302 None:intergenic 40.0%
AGAATGTAGCTGTGAAAGCA+AGG + chr1.2:54768990-54769009 None:intergenic 40.0%
AGGTTGCAATATCAGTGCTT+CGG - chr1.2:54773623-54773642 MS.gene50542:intron 40.0%
ATAGTCCAAGAATTGGAGGA+AGG + chr1.2:54767937-54767956 None:intergenic 40.0%
ATGACCACAGCTATCAAAAC+TGG - chr1.2:54771937-54771956 MS.gene50542:intron 40.0%
ATTAACCTCATTGGCCAACA+TGG + chr1.2:54768938-54768957 None:intergenic 40.0%
CAAACACTGTTGAGTGCTAT+AGG - chr1.2:54771448-54771467 MS.gene50542:intron 40.0%
CAACAAATCCAGCTTCCAAA+AGG - chr1.2:54774323-54774342 MS.gene50542:CDS 40.0%
CAGCAGCTGAAATCAATTCT+AGG - chr1.2:54769928-54769947 MS.gene50542:intron 40.0%
CCCAAAAGAGATGAATCAGA+GGG - chr1.2:54774420-54774439 MS.gene50542:CDS 40.0%
CTATAGCACTCAACAGTGTT+TGG + chr1.2:54771450-54771469 None:intergenic 40.0%
CTTATCAAGAGTAGCAGCTA+GGG + chr1.2:54770636-54770655 None:intergenic 40.0%
GACTTCAAAAATGGTTGAGG+AGG + chr1.2:54767689-54767708 None:intergenic 40.0%
GATGATGTTTACCAGTTGTG+AGG + chr1.2:54773153-54773172 None:intergenic 40.0%
GCAAGATATCTATCCTGGTT+AGG + chr1.2:54769216-54769235 None:intergenic 40.0%
GCATCCAGCATTATAGTTCA+CGG + chr1.2:54773276-54773295 None:intergenic 40.0%
GGTAAAAATGGATCGCATGA+CGG + chr1.2:54769989-54770008 None:intergenic 40.0%
GTAACATGTGTACTCATGGT+GGG + chr1.2:54771549-54771568 None:intergenic 40.0%
GTCTGCATTAGCGCATATAT+GGG - chr1.2:54773479-54773498 MS.gene50542:intron 40.0%
GTGTTAGCAAATACACTGTC+TGG - chr1.2:54769718-54769737 MS.gene50542:intron 40.0%
TCAACTATAGTAAGCCTCAG+GGG - chr1.2:54768195-54768214 MS.gene50542:intron 40.0%
TCACATAGTCCAAGAATTGG+AGG + chr1.2:54767941-54767960 None:intergenic 40.0%
TCCCAAAAGAGATGAATCAG+AGG - chr1.2:54774419-54774438 MS.gene50542:CDS 40.0%
TCCTTTCACAGTCATAGTCA+TGG + chr1.2:54770497-54770516 None:intergenic 40.0%
TCTTATCAAGAGTAGCAGCT+AGG + chr1.2:54770637-54770656 None:intergenic 40.0%
TCTTTCCAGATGATCCATTG+AGG - chr1.2:54767735-54767754 MS.gene50542:CDS 40.0%
TGACTAGATGAATGGTGAAC+TGG + chr1.2:54768171-54768190 None:intergenic 40.0%
TGCCCTAGAACTATTGGTAA+AGG + chr1.2:54772324-54772343 None:intergenic 40.0%
TGTAACATGTGTACTCATGG+TGG + chr1.2:54771550-54771569 None:intergenic 40.0%
TGTTGGCATTATAGCTCTTG+CGG - chr1.2:54771966-54771985 MS.gene50542:intron 40.0%
TTCAAAAATGGTTGAGGAGG+TGG + chr1.2:54767686-54767705 None:intergenic 40.0%
TTCACAGCTACATTCTTTGC+TGG - chr1.2:54768994-54769013 MS.gene50542:CDS 40.0%
TTGGGTAGGATTAACCTCAT+TGG + chr1.2:54768947-54768966 None:intergenic 40.0%
TTGGTAAAGGTCATGTGATC+TGG + chr1.2:54772311-54772330 None:intergenic 40.0%
TTGTTCATAGGATCTCAAGG+TGG - chr1.2:54773910-54773929 MS.gene50542:intron 40.0%
TTTCAGGAAGGAATAGCTGT+GGG - chr1.2:54773028-54773047 MS.gene50542:CDS 40.0%
! AAGGCCAAGGACATTTGTTT+TGG - chr1.2:54773663-54773682 MS.gene50542:intron 40.0%
! ACCCTCTGATTCATCTCTTT+TGG + chr1.2:54774424-54774443 None:intergenic 40.0%
! AGAAACAACCGAGGTTCTTT+TGG - chr1.2:54770874-54770893 MS.gene50542:intron 40.0%
! CCCTCTGATTCATCTCTTTT+GGG + chr1.2:54774423-54774442 None:intergenic 40.0%
! GAAACAACCGAGGTTCTTTT+GGG - chr1.2:54770875-54770894 MS.gene50542:intron 40.0%
! GGACTTTTGCAAGCTTCATT+GGG - chr1.2:54769015-54769034 MS.gene50542:intron 40.0%
! GTCTTTGGCAGTGTTGAAAT+TGG - chr1.2:54773506-54773525 MS.gene50542:intron 40.0%
! TACTATTTGTTGCAAGGCCA+AGG - chr1.2:54773650-54773669 MS.gene50542:intron 40.0%
! TGGACTTTTGCAAGCTTCAT+TGG - chr1.2:54769014-54769033 MS.gene50542:intron 40.0%
! TTGGTGCCCATTCAAATATG+GGG + chr1.2:54767817-54767836 None:intergenic 40.0%
!! AAACCTATTTCTCTAGAGCG+GGG - chr1.2:54770075-54770094 MS.gene50542:intron 40.0%
!! AGCACCAACTTTTTAGAAGC+TGG + chr1.2:54767776-54767795 None:intergenic 40.0%
!! AGGCCAAGGACATTTGTTTT+GGG - chr1.2:54773664-54773683 MS.gene50542:intron 40.0%
!! ATGCAATGATGGGTAGTTCA+AGG - chr1.2:54768866-54768885 MS.gene50542:intron 40.0%
!! CAAACCTATTTCTCTAGAGC+GGG - chr1.2:54770074-54770093 MS.gene50542:intron 40.0%
!! CAACTTTATTGATTCGTCCC+GGG - chr1.2:54768417-54768436 MS.gene50542:CDS 40.0%
!! CTTGGTGCCCATTCAAATAT+GGG + chr1.2:54767818-54767837 None:intergenic 40.0%
!! GCTTCTAAAAAGTTGGTGCT+CGG - chr1.2:54767776-54767795 MS.gene50542:intron 40.0%
!! TGAAACTAGACAAGGCATTG+AGG - chr1.2:54772151-54772170 MS.gene50542:CDS 40.0%
!! TGCAATGATGGGTAGTTCAA+GGG - chr1.2:54768867-54768886 MS.gene50542:intron 40.0%
!! TTTTCAGGAAGGAATAGCTG+TGG - chr1.2:54773027-54773046 MS.gene50542:CDS 40.0%
!!! CTACGTAGCTACTTTTGTCA+TGG + chr1.2:54770715-54770734 None:intergenic 40.0%
!!! GAATGTTGGTGCTGTTTTTC+AGG - chr1.2:54773012-54773031 MS.gene50542:intron 40.0%
!!! GTCCTAAAATTTTTGGTGCC+CGG + chr1.2:54768438-54768457 None:intergenic 40.0%
!!! TCCTAAAATTTTTGGTGCCC+GGG + chr1.2:54768437-54768456 None:intergenic 40.0%
AACCTCCTCAATGGATCATC+TGG + chr1.2:54767743-54767762 None:intergenic 45.0%
ACCTCATAGAAACCTTGGCA+AGG + chr1.2:54772455-54772474 None:intergenic 45.0%
ACCTTGCCAAGGTTTCTATG+AGG - chr1.2:54772451-54772470 MS.gene50542:intron 45.0%
AGCTTCCAAAAGGATGTAGG+AGG - chr1.2:54774333-54774352 MS.gene50542:CDS 45.0%
AGTTCAAGGGATTTGGCAGT+TGG - chr1.2:54768880-54768899 MS.gene50542:intron 45.0%
ATGTAGCTGTGAAAGCAAGG+TGG + chr1.2:54768987-54769006 None:intergenic 45.0%
CAACGTTCATACCCGAACAA+GGG + chr1.2:54767637-54767656 None:intergenic 45.0%
CAGCACACTTCCCAGTATAA+CGG + chr1.2:54770925-54770944 None:intergenic 45.0%
CCATTACCTCCCTTGATTTC+CGG + chr1.2:54769681-54769700 None:intergenic 45.0%
CCGAATGCAAATCGTGTTTC+CGG - chr1.2:54773730-54773749 MS.gene50542:intron 45.0%
CCGGAAACACGATTTGCATT+CGG + chr1.2:54773733-54773752 None:intergenic 45.0%
CGTCTGCATTAGCGCATATA+TGG - chr1.2:54773478-54773497 MS.gene50542:intron 45.0%
CTCTCAATCATGCGATCTCT+TGG - chr1.2:54770133-54770152 MS.gene50542:CDS 45.0%
GAAGGGCAAGATATCTATCC+TGG + chr1.2:54769221-54769240 None:intergenic 45.0%
GAATATGGGTGGTATTCGGT+TGG + chr1.2:54771476-54771495 None:intergenic 45.0%
GATGGGTAGTTCAAGGGATT+TGG - chr1.2:54768873-54768892 MS.gene50542:intron 45.0%
GCAAGGTGGAGAAAAAGCTT+AGG + chr1.2:54768973-54768992 None:intergenic 45.0%
GCAGTTGGATCTCTTCTGAT+GGG - chr1.2:54768910-54768929 MS.gene50542:CDS 45.0%
GCCATGACTATGACTGTGAA+AGG - chr1.2:54770493-54770512 MS.gene50542:intron 45.0%
GGATACGATATCAGCAGCAT+GGG + chr1.2:54769968-54769987 None:intergenic 45.0%
GTCAATCTTCCAGAGATGGA+TGG + chr1.2:54773444-54773463 None:intergenic 45.0%
GTTCTATTACACTCCTCTGG+TGG - chr1.2:54773364-54773383 MS.gene50542:intron 45.0%
TATTTGCCGGAAATCAAGGG+AGG - chr1.2:54769672-54769691 MS.gene50542:intron 45.0%
TCAACGTTCATACCCGAACA+AGG + chr1.2:54767638-54767657 None:intergenic 45.0%
TCCAAGAATTGGAGGAAGGT+TGG + chr1.2:54767933-54767952 None:intergenic 45.0%
TCCAGCTTCCAAAAGGATGT+AGG - chr1.2:54774330-54774349 MS.gene50542:CDS 45.0%
TGAAATTGGAACTGCAACGG+TGG - chr1.2:54770821-54770840 MS.gene50542:intron 45.0%
TGGCATCACTATTGCTAGCT+TGG - chr1.2:54767874-54767893 MS.gene50542:intron 45.0%
TGTCACATGCAGCCATAGTA+GGG - chr1.2:54769872-54769891 MS.gene50542:intron 45.0%
TGTTCTCCTACTTCTCAGTC+TGG - chr1.2:54773562-54773581 MS.gene50542:intron 45.0%
TTCCAGATGATCCATTGAGG+AGG - chr1.2:54767738-54767757 MS.gene50542:CDS 45.0%
TTCTTCATCACCTCACTTCC+AGG + chr1.2:54774300-54774319 None:intergenic 45.0%
TTGGCATAGCTAATGCCTTG+AGG + chr1.2:54767905-54767924 None:intergenic 45.0%
TTGGTTATTGCAGTGGAGGT+GGG - chr1.2:54770277-54770296 MS.gene50542:intron 45.0%
TTTGGTCAATCCTGGAAGTG+AGG - chr1.2:54774287-54774306 MS.gene50542:CDS 45.0%
TTTGGTTATTGCAGTGGAGG+TGG - chr1.2:54770276-54770295 MS.gene50542:intron 45.0%
! AACGTTGATGAGAGTGTGCA+TGG - chr1.2:54767650-54767669 MS.gene50542:CDS 45.0%
! GCATATATGGGCGTTGTCTT+TGG - chr1.2:54773491-54773510 MS.gene50542:intron 45.0%
! TCCCGGGCACCAAAAATTTT+AGG - chr1.2:54768433-54768452 MS.gene50542:intron 45.0%
!! AAGGCCAGTTTTGATAGCTG+TGG + chr1.2:54771944-54771963 None:intergenic 45.0%
!! GCATGTGAAATTTTCTGGCC+TGG - chr1.2:54773859-54773878 MS.gene50542:intron 45.0%
!! GCTTGGTGCCCATTCAAATA+TGG + chr1.2:54767819-54767838 None:intergenic 45.0%
!! TCCTACATCCTTTTGGAAGC+TGG + chr1.2:54774334-54774353 None:intergenic 45.0%
!! TCTTCTGATGGGTTCCATGT+TGG - chr1.2:54768921-54768940 MS.gene50542:CDS 45.0%
!!! CAGCTTGTTTTGGTCAATCC+TGG - chr1.2:54774279-54774298 MS.gene50542:CDS 45.0%
!!! GTTGGTGCTGTTTTTCAGGA+AGG - chr1.2:54773016-54773035 MS.gene50542:intron 45.0%
!! TTATTAAAAATTACTAAAAA+TGG - chr1.2:54768664-54768683 MS.gene50542:CDS 5.0%
!!! AAAATTTTTGTTTATTTATT+TGG - chr1.2:54770258-54770277 MS.gene50542:intron 5.0%
!!! TAAATAAACAAAAATTTTAT+TGG + chr1.2:54770256-54770275 None:intergenic 5.0%
ACCAGTTGTGAGGTAGCAAG+AGG + chr1.2:54773143-54773162 None:intergenic 50.0%
ACCTCTTGCTACCTCACAAC+TGG - chr1.2:54773139-54773158 MS.gene50542:CDS 50.0%
ACTATAGTAAGCCTCAGGGG+TGG - chr1.2:54768198-54768217 MS.gene50542:intron 50.0%
ATGAAGCAGCCATCCATCTC+TGG - chr1.2:54773432-54773451 MS.gene50542:intron 50.0%
CAAGAGTAGCAGCTAGGGTA+GGG + chr1.2:54770631-54770650 None:intergenic 50.0%
CATGCGATCTCTTGGAAGAC+CGG - chr1.2:54770141-54770160 MS.gene50542:CDS 50.0%
CCGGAAATCAAGGGAGGTAA+TGG - chr1.2:54769678-54769697 MS.gene50542:intron 50.0%
CGGATACGATATCAGCAGCA+TGG + chr1.2:54769969-54769988 None:intergenic 50.0%
CTACTATGGCTGCATGTGAC+AGG + chr1.2:54769873-54769892 None:intergenic 50.0%
CTCAAGGTGGATCGATGAAG+AGG - chr1.2:54773923-54773942 MS.gene50542:intron 50.0%
CTGTCACATGCAGCCATAGT+AGG - chr1.2:54769871-54769890 MS.gene50542:intron 50.0%
GCAGCCATAGTAGGGTTCAT+GGG - chr1.2:54769880-54769899 MS.gene50542:intron 50.0%
GCCAACCTTCCTCCAATTCT+TGG - chr1.2:54767929-54767948 MS.gene50542:CDS 50.0%
GCTGACACCCAAAAGAACCT+CGG + chr1.2:54770885-54770904 None:intergenic 50.0%
GGATTTGGCAGTTGGAACTG+TGG - chr1.2:54768888-54768907 MS.gene50542:intron 50.0%
GGCAGTTGGATCTCTTCTGA+TGG - chr1.2:54768909-54768928 MS.gene50542:CDS 50.0%
GTGCAGGTTAGGGTTTATCG+TGG - chr1.2:54769843-54769862 MS.gene50542:intron 50.0%
TCAAGAGTAGCAGCTAGGGT+AGG + chr1.2:54770632-54770651 None:intergenic 50.0%
TCCTCCCATGAACCCTACTA+TGG + chr1.2:54769887-54769906 None:intergenic 50.0%
TCGGCCGTGAACTATAATGC+TGG - chr1.2:54773269-54773288 MS.gene50542:intron 50.0%
TGCAGAGCAAGAAACAACCG+AGG - chr1.2:54770865-54770884 MS.gene50542:intron 50.0%
TGCAGCCATAGTAGGGTTCA+TGG - chr1.2:54769879-54769898 MS.gene50542:intron 50.0%
TGGAGGAAGGTTGGCAAGTT+TGG + chr1.2:54767924-54767943 None:intergenic 50.0%
! CGTTATACTGGGAAGTGTGC+TGG - chr1.2:54770923-54770942 MS.gene50542:intron 50.0%
! GCTAGCTTGGCTATTCCTCA+AGG - chr1.2:54767887-54767906 MS.gene50542:intron 50.0%
! TGATGAGAGTGTGCATGGTG+TGG - chr1.2:54767655-54767674 MS.gene50542:CDS 50.0%
!! AGACCCCGCTCTAGAGAAAT+AGG + chr1.2:54770081-54770100 None:intergenic 50.0%
!! GCAAGCTTGTTACCTTGCCA+AGG - chr1.2:54772440-54772459 MS.gene50542:intron 50.0%
!! TTCAGGGCCATTTTCGCGTT+CGG - chr1.2:54773250-54773269 MS.gene50542:intron 50.0%
!!! TTTTGGTGCCCCTACAAACG+CGG + chr1.2:54768248-54768267 None:intergenic 50.0%
ATGAGGTGGGGTGCAGGTTA+GGG - chr1.2:54769833-54769852 MS.gene50542:intron 55.0%
ATGGCTGCTAGTACCACCAG+AGG + chr1.2:54773380-54773399 None:intergenic 55.0%
CACTTGAACACCGTGGTGCT+CGG + chr1.2:54770964-54770983 None:intergenic 55.0%
CCGTTGGCGTCCGTTATACT+GGG - chr1.2:54770912-54770931 MS.gene50542:intron 55.0%
GCAGTTGGAACTGTGGCAGT+TGG - chr1.2:54768895-54768914 MS.gene50542:intron 55.0%
GCCATAGTAGGGTTCATGGG+AGG - chr1.2:54769883-54769902 MS.gene50542:intron 55.0%
GGGTTCCATGTTGGCCAATG+AGG - chr1.2:54768930-54768949 MS.gene50542:CDS 55.0%
TGCTCACCACTTGAACACCG+TGG + chr1.2:54770971-54770990 None:intergenic 55.0%
TTCACGGCCGAACGCGAAAA+TGG + chr1.2:54773260-54773279 None:intergenic 55.0%
!! AGGTGGGAAAGCGCTGTGTT+GGG - chr1.2:54770293-54770312 MS.gene50542:intron 55.0%
!! CCCAGTATAACGGACGCCAA+CGG + chr1.2:54770915-54770934 None:intergenic 55.0%
CATGAGGTGGGGTGCAGGTT+AGG - chr1.2:54769832-54769851 MS.gene50542:intron 60.0%
CATGGGAGGAGCAGCTACAG+TGG - chr1.2:54769897-54769916 MS.gene50542:intron 60.0%
CGAGCACCACGGTGTTCAAG+TGG - chr1.2:54770962-54770981 MS.gene50542:intron 60.0%
GCCGTTGGCGTCCGTTATAC+TGG - chr1.2:54770911-54770930 MS.gene50542:intron 60.0%
GGTGTCAGCAATGACGCCGT+TGG - chr1.2:54770896-54770915 MS.gene50542:intron 60.0%
TAACGCATGAGGTGGGGTGC+AGG - chr1.2:54769827-54769846 MS.gene50542:intron 60.0%
TAGTAAGCCTCAGGGGTGGC+CGG - chr1.2:54768202-54768221 MS.gene50542:intron 60.0%
TTCACTCACGCCGAGCACCA+CGG - chr1.2:54770951-54770970 MS.gene50542:intron 60.0%
!! GAGGTGGGAAAGCGCTGTGT+TGG - chr1.2:54770292-54770311 MS.gene50542:intron 60.0%
CCCTACAAACGCGGTGCCCT+GGG + chr1.2:54768239-54768258 None:intergenic 65.0%
!! CCAGGGCACCGCGTTTGTAG+GGG - chr1.2:54768237-54768256 MS.gene50542:intron 65.0%
!! CCCAGGGCACCGCGTTTGTA+GGG - chr1.2:54768236-54768255 MS.gene50542:intron 65.0%
AAGCCTCAGGGGTGGCCGGA+GGG - chr1.2:54768206-54768225 MS.gene50542:intron 70.0%
CCCCTACAAACGCGGTGCCC+TGG + chr1.2:54768240-54768259 None:intergenic 70.0%
TAAGCCTCAGGGGTGGCCGG+AGG - chr1.2:54768205-54768224 MS.gene50542:intron 70.0%
!! GCCCAGGGCACCGCGTTTGT+AGG - chr1.2:54768235-54768254 MS.gene50542:intron 70.0%
AGCCTCAGGGGTGGCCGGAG+GGG - chr1.2:54768207-54768226 MS.gene50542:intron 75.0%
! CTCAGGGGTGGCCGGAGGGG+CGG - chr1.2:54768210-54768229 MS.gene50542:intron 80.0%
! CGCCCCTCCGGCCACCCCTG+AGG + chr1.2:54768212-54768231 None:intergenic 85.0%
! GCCCTGGGCTGCCGCCCCTC+CGG + chr1.2:54768224-54768243 None:intergenic 85.0%
! GCCGGAGGGGCGGCAGCCCA+GGG - chr1.2:54768220-54768239 MS.gene50542:intron 85.0%
! GGCCGGAGGGGCGGCAGCCC+AGG - chr1.2:54768219-54768238 MS.gene50542:intron 90.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 54767608 54774458 54767608 ID=MS.gene50542
chr1.2 mRNA 54767608 54774458 54767608 ID=MS.gene50542.t1;Parent=MS.gene50542
chr1.2 exon 54774110 54774458 54774110 ID=MS.gene50542.t1.exon1;Parent=MS.gene50542.t1
chr1.2 CDS 54774110 54774458 54774110 ID=cds.MS.gene50542.t1;Parent=MS.gene50542.t1
chr1.2 exon 54773020 54773227 54773020 ID=MS.gene50542.t1.exon2;Parent=MS.gene50542.t1
chr1.2 CDS 54773020 54773227 54773020 ID=cds.MS.gene50542.t1;Parent=MS.gene50542.t1
chr1.2 exon 54772046 54772217 54772046 ID=MS.gene50542.t1.exon3;Parent=MS.gene50542.t1
chr1.2 CDS 54772046 54772217 54772046 ID=cds.MS.gene50542.t1;Parent=MS.gene50542.t1
chr1.2 exon 54771711 54771776 54771711 ID=MS.gene50542.t1.exon4;Parent=MS.gene50542.t1
chr1.2 CDS 54771711 54771776 54771711 ID=cds.MS.gene50542.t1;Parent=MS.gene50542.t1
chr1.2 exon 54771083 54771196 54771083 ID=MS.gene50542.t1.exon5;Parent=MS.gene50542.t1
chr1.2 CDS 54771083 54771196 54771083 ID=cds.MS.gene50542.t1;Parent=MS.gene50542.t1
chr1.2 exon 54770079 54770195 54770079 ID=MS.gene50542.t1.exon6;Parent=MS.gene50542.t1
chr1.2 CDS 54770079 54770195 54770079 ID=cds.MS.gene50542.t1;Parent=MS.gene50542.t1
chr1.2 exon 54768906 54769032 54768906 ID=MS.gene50542.t1.exon7;Parent=MS.gene50542.t1
chr1.2 CDS 54768906 54769032 54768906 ID=cds.MS.gene50542.t1;Parent=MS.gene50542.t1
chr1.2 exon 54768525 54768811 54768525 ID=MS.gene50542.t1.exon8;Parent=MS.gene50542.t1
chr1.2 CDS 54768525 54768811 54768525 ID=cds.MS.gene50542.t1;Parent=MS.gene50542.t1
chr1.2 exon 54768251 54768441 54768251 ID=MS.gene50542.t1.exon9;Parent=MS.gene50542.t1
chr1.2 CDS 54768251 54768441 54768251 ID=cds.MS.gene50542.t1;Parent=MS.gene50542.t1
chr1.2 exon 54768061 54768146 54768061 ID=MS.gene50542.t1.exon10;Parent=MS.gene50542.t1
chr1.2 CDS 54768061 54768146 54768061 ID=cds.MS.gene50542.t1;Parent=MS.gene50542.t1
chr1.2 exon 54767895 54767971 54767895 ID=MS.gene50542.t1.exon11;Parent=MS.gene50542.t1
chr1.2 CDS 54767895 54767971 54767895 ID=cds.MS.gene50542.t1;Parent=MS.gene50542.t1
chr1.2 exon 54767608 54767784 54767608 ID=MS.gene50542.t1.exon12;Parent=MS.gene50542.t1
chr1.2 CDS 54767608 54767784 54767608 ID=cds.MS.gene50542.t1;Parent=MS.gene50542.t1
Gene Sequence

>MS.gene50542

ATGGGAAACGTAGACTATGATGATTACCCTTGTTCGGGTATGAACGTTGATGAGAGTGTGCATGGTGTGGCAATTCCACCTCCTCAACCATTTTTGAAGTCTATGAAGTATTCAATGAAAGAGACTTTCTTTCCAGATGATCCATTGAGGAGGTTTAAGAATCAACCAGCTTCTAAAAAGTTGGTGCTCGGTCTTCAGTATTTTTTCCCCATATTTGAATGGGCACCAAGCTACACTTTTCAGTTCTTGAAATCTGATCTCATAGCTGGCATCACTATTGCTAGCTTGGCTATTCCTCAAGGCATTAGCTATGCCAAACTTGCCAACCTTCCTCCAATTCTTGGACTATGTGAGTTCTACTAGTATTAATTTGTTACTTAATTATCATATAAATATATACCATTTTTTTGGTTTTACTAAATGAAATAGGATTAATTACTAAAATTAGTAACAATGTGTTTTCAAATTCAAACTGGACATTAAATCGGTGTATTATCTGAATCATTGTTTACTTGCTCGAACTATGATCAATCTTCTCAAACAACTAATTGTAAAGAGTACCAGTTCACCATTCATCTAGTCACAATTCAACTATAGTAAGCCTCAGGGGTGGCCGGAGGGGCGGCAGCCCAGGGCACCGCGTTTGTAGGGGCACCAAAAACTATTATTTTTACTTAGTGAGTATTTTACAAATATATTTCTTTTTAACTCGTTTGGATTAATTATATTGAAAATATATTTTGTGAGAAACTTGATGATTGAATAAATCATTTGCAAAGAAAGAAGACATTCAAATAATTAAAACGACACAACTTTATTGATTCGTCCCGGGCACCAAAAATTTTAGGACTGACTAAGACTATTTGATTCGATTTCTCAAACATTAAAAAATAAAATCCATAAAAAATATTTTGTTGCTAAAATGTTTATTGAGAGAATCAAAGACTAGTTTATATATTTTTTTGGGACATTGATATGGACCTCAAAAAAGAGTCTATACCAATTACCAATTAGCAAAATAATATATTTTATAATAAGATAATCAGATTCAATAGTTTATTAAAAATTACTAAAAATGGTAATCGTAAACTTTGAACATTTTTTTAAGCACCATTTTCTTCCATATACTTTTCTTGCTAATTAACTTTTTTATTAACTCAACACTTTTCTTGTCATAATTAAATATTTAATTTATGTTATGACATGTTTTATTGATGTACATATTTTGCAGATTCAAGCTTTATACCACCGTTAATTTATGCAATGATGGGTAGTTCAAGGGATTTGGCAGTTGGAACTGTGGCAGTTGGATCTCTTCTGATGGGTTCCATGTTGGCCAATGAGGTTAATCCTACCCAAAATCCTAAGCTTTTTCTCCACCTTGCTTTCACAGCTACATTCTTTGCTGGACTTTTGCAAGCTTCATTGGGTCTCTTTAGGTAATAAAAATTCTAATCAATAATTAATAACTACTCTAAATATCGTTAAAAAGTAGTATGTTGTCATAAAGTAAACTACTATTAAAATGATATGTTAGTATGTTACTGGATATGGAAAAATAAATAAAATAATTGCAATATGGGAAAAAGGTAAGAATATATATATCCTAACCAGGATAGATATCTTGCCCTTCTTTTTGTGTTGTCTTGTGAAAAGATCTTGCAACTTTGCACCATGCAATGAGATTCGTCCATTTCGCATCCCATATTACTATTACATTATTACAATGAAGAATTAAATTATTCTGAATTAAGGCATATACTTGGTTTAATTAACAAAAAAATAAATACTTGGTTTAATAATTTACTACAAATATTAAATCTATCAATTGAACTGTAAAATAAAAATTCTTATTAAGTAATATAGTTGATATATAAAATTAAAAGTTCACTTGTTCTTAAAATTCTTTTAGCAAGTGTGATTGGTATATTCATTGTTTGTTTTCAGTCATATAGTTGAAATGATACAATTATTTTATGAATTTCCCTTTCCGAACGTTGCTATTTATCTAGAGAGTTTTTATCAAGAATTTATCAAGAAAATGTCTCAGCCAATTAAATTTGTTATTTGCCGGAAATCAAGGGAGGTAATGGTGTGTAATTAAGGAAATGTGTTAGCAAATACACTGTCTGGAAATTTTCTTGATACATTTTGTCACTGTATCTATCATTTCCCTTTCCTTAAATATTATTGATGCATGGTAATATAACAAGTTATAATAACGCATGAGGTGGGGTGCAGGTTAGGGTTTATCGTGGATTTCCTGTCACATGCAGCCATAGTAGGGTTCATGGGAGGAGCAGCTACAGTGGTTTGTTTACAGCAGCTGAAATCAATTCTAGGACTTGAACATTTCACCCATGCTGCTGATATCGTATCCGTCATGCGATCCATTTTTACCCAAACTCATCAGGTAGAAAAACTAAAAACGAAATCGATTATATTTATACTGATCAAAAACTTATTCAAACCTATTTCTCTAGAGCGGGGTCTTGAACCAAGTTTCTCAAAGTTGAAGAGAGAAACTCTCAATCATGCGATCTCTTGGAAGACCGGCTTAGTCAAACCTATTTTATATAAACAAACATATTTTATTTTTATAGTTACAATAATGCTATGTAACTTATCTGACTTAGTTTTTTACTCCAATAAAATTTTTGTTTATTTATTTGGTTATTGCAGTGGAGGTGGGAAAGCGCTGTGTTGGGATTTTGCTTCATTTTCTTTCTCCTTGTTACAAGATACTTCGTAAGTATTACCTAACACATATTCATTGGCATAAACTATAGAAATTTATTATTAAAAATTATTAATAATGCATGATCTAGATTTCTTTAGTTGCTATGATAATCTTTTTCTCACCAAATGATATTTACACAGCAAGAGCCATGACTATGACTGTGAAAGGATTAGATCCCAAATCTGTCACTTATTTCTCCTTGCATTAATTATTATGCTAGACTAGATGTTTATAGAAATTATGGGAATTAAAAATTAGCTTTGATTAATATCAATTTCTTCCCTACCCTAGCTGCTACTCTTGATAAGATAGATTAAAGTCAACAAATTTTCTCAGCGGCATTTGACGTTTAAAATTACTGCAGCCATGACAAAAGTAGCTACGTAGTATCATATCATAATCATACTATTATTACTGTATAATAAAATAAATAAATTTATATGCTATCATTTGTTACTAAAATTAATTTAACTTGAAATTGGAACTGCAACGGTGGTTTGTGACGTTAATTGATCAATGCAGAGCAAGAAACAACCGAGGTTCTTTTGGGTGTCAGCAATGACGCCGTTGGCGTCCGTTATACTGGGAAGTGTGCTGGTTTATTTCACTCACGCCGAGCACCACGGTGTTCAAGTGGTGAGCATTTCTCCGATTAGATTAATTTTTATGTGTTGACGGTACAATTTATTTTACACGTACATTCAATCAAATTTATATTATGATATGACTTTTTTTGTTCCTGTAAATATTTATATGCAAACAACAAGTTGGTTTGATTTAATCGGATAAATGTTAAAAAAGTTGTATCGTTAGTATATACAAATTAAATTCTTACATGTATATATTTGACACTCTAAATTTTACATATATATCAAATCACGTCATGTAGATATTTGTGAGAATATTTTATGAATTAAATTAAAAAAACGACATTATGATGTGATTTGATTAAAAGCATAAGTCATTTTTTTTTTATAATTTTTTACTTTCCTTCAAGGATGATCTAATCATGATTTTATTAAATATACTTTGTATTAAATAAAATAAAATTGAATTGCATAGTCTATATTTTGTCACAACGCACTGAGACAGAAAAGAGCCAAACACTGTTGAGTGCTATAGGGTCCAACCGAATACCACCCATATTCAATGAGTATTCTTATCTGGTAGGACCTGCAAATGAATCATTTTTCTAAAACCCACCATGAGTACACATGTTACATGTATACTTCACACTTTTTTAATTTCACAAATTGCAGTTTGATTTTTTAAATTAATGAAATAATTTATGAAATTGAAAAATCTTTCATTGTACATTAGCTCATTTATATGTAAGTAAAATTTAGATCAACAAAAATGTATATATTTACTCTAAATTTTAAACAAGATATATCAATTTTTGTTGATCAAACTTTATCTTATATACATGACATCGGAAGGATTAATTATCATATTACTACTTTTGTTGGACTAATATATATTATTTTTTGGTATTGTAATTGCCAAATTGGCACATGTTTCAGATAGGAGAATTGAAGAAAGGACTAAATCCACCATCACTCACAGATTTGGTATTTGTGTCACCATATATGACCACAGCTATCAAAACTGGCCTTATTGTTGGCATTATAGCTCTTGCGGTAACTACCTCTCAACTCAAACTCTTTTATTTCCTTTATTGCGTAATAATACACTTTTAGACATGGCAAAACTAAACGTGACTTAACATGTGTGCACAACATAATAAAGACACACTCTAACTCTAATATGTCACATCACATCCTTAACCAAAGAAGAATGAAATGAAACTAGACAAGGCATTGAGGCAATAACTTTATTATTGGTGGATTTATATGTTTTTGTCAAATGCTCATCATATGGACATGGTCCTCCTCATTTGACAATTATTTCGATACAAGTCAAATTGTGTCTTCAAGAGACAAAGTTACTTGAATGCACACCAGATCACATGACCTTTACCAATAGTTCTAGGGCATTATCTTTGTATCTATTCCTATATAATTTTATACAAAAGCATATACCTCTTTATTTACATTTAAAAGAATAAATTGAAATTATTATATGATTGTTTGCAAGCTTGTTACCTTGCCAAGGTTTCTATGAGGTCATAATCATATTGATTGCATAATTTGTTAGTAGTCATTAAATACAAAACAATAGGTTTTTTCTCTTCTCTCAAAAAAAAAAAAAAAAGGTTTTGGTGCATATATATGAAAGTTATTTGTAGTGGACAAACATGTACATCATGCCATAGCTGTTACTACAAGATTTAAGTAGAAAGAGTTGACCTTATACTACTGTTTTTTAAAAACAAAATGGGCTAATGAAAATTATTATTAATTAAAATGACATTAATGATCATTTTAGAACCGGTTCTATGAGAAAATTATTAATAGTCATTTTACAACCGACTCCAAGAGAATTTGAATTTCATCCCTTGATATTACAAGGTCAAACTCTTATCATTTAGCTGACACCTTATCGAATACTTATCATATTCAAAATTCTTTTAATTATATCATGAGGATACTTTGAAATCTATGAAATGGCATATGCAATGCCTTTCTTCCAATTAAATGTCATATGTAATAGACAAAGTCCTAGATATGCTAATTTAGTTAATGTAGATTTCAATAGGATCTTGAATGTTGGTGCTGTTTTTCAGGAAGGAATAGCTGTGGGAAGAAGCTTTGCAATGTATAAAAATTATCATATTGATGGAAACAAAGAGATGATAGCTATTGGAACCATGAACATAGTTGGTTCTTTCACCTCTTGCTACCTCACAACTGGTAAACATCATCACCACCAAATCTTAACATCAGTATTACTTTTGTACATTAATTGCTAACATGTTTTTTGTTATAAAAATGATAACTCTTTCAGGGCCATTTTCGCGTTCGGCCGTGAACTATAATGCTGGATGCAAGACAGCAGCATCCAACATTGTGATGTCAATTGCAGTCATGTTGACACTGTTGTTCTTGACACCTTTGTTCTATTACACTCCTCTGGTGGTACTAGCAGCCATAATTGTATCTGCAATGCTTGGACTTATAGATTATGAAGCAGCCATCCATCTCTGGAAGATTGACAAATTCGATTTTTTCGTCTGCATTAGCGCATATATGGGCGTTGTCTTTGGCAGTGTTGAAATTGGCTTAGTCATAGCAGTATGTATCAATAGTCTCTTTGTTCTCCTACTTCTCAGTCTGGTATATAAATTTATGAAATTAATGTGTTTTCTTATGTTTAGGTTGCAATATCAGTGCTTCGGTTACTACTATTTGTTGCAAGGCCAAGGACATTTGTTTTGGGAAACATTCCAAATTCTGTAATATACAGAAACATTGAGCATTATCCGAATGCAAATCGTGTTTCCGGAATTCTAATTCTAAAGATTGATGCACCAATTTACTTTGCCAATGCAAGCTATTTAAGAGAGAGGTAAGATACCTGAAAATTTGCTTTTTTCCTTTTTCTTTCTCTAGCATGTGAAATTTTCTGGCCTGGAATAATTTGACACACAAGGAAACTGTTATTGTTCATAGGATCTCAAGGTGGATCGATGAAGAGGAAGACAGAATTAAAGATACAGGGGAGACAATTTTGAATTATGTTATACTGGATATGAGTGGTGAGTAATGAGCCTTTGAGATATGGCAATTAATCAAAACATGGTTATTAGAATTTTCAGTCTAACTTGCAGTGTAATTTTATTGGCAGCTGTTGGAAATATTGATACAAGTGGAATAAGTATGCTTGAAGAGACTAAAAAGATGGCTGAAAGAAGAGAGCTGCAAGTAATTATTTCTCTAGTGTCATTTGCTAATCATGAACCAAATATTTTTTATAGCTTATTCATTGTAGCATCTTTGTTAACCTTTAAATCTTTTCATTCCTATGATTACAGCTTGTTTTGGTCAATCCTGGAAGTGAGGTGATGAAGAAACTCAACAAATCCAGCTTCCAAAAGGATGTAGGAGGAAATTGGATCTATCTGACAGTGGAAGATGCTGTTAGAGCATGTAACTTTGCATGCAAAACAAATCCCAAAAGAGATGAATCAGAGGGTTGGAACAATGTCTGA
Protein sequence

>MS.gene50542.t1

MGNVDYDDYPCSGMNVDESVHGVAIPPPQPFLKSMKYSMKETFFPDDPLRRFKNQPASKKLVLGLQYFFPIFEWAPSYTFQFLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLANEVNPTQNPKLFLHLAFTATFFAGLLQASLGLFRLGFIVDFLSHAAIVGFMGGAATVVCLQQLKSILGLEHFTHAADIVSVMRSIFTQTHQWRWESAVLGFCFIFFLLVTRYFSKKQPRFFWVSAMTPLASVILGSVLVYFTHAEHHGVQVIGELKKGLNPPSLTDLVFVSPYMTTAIKTGLIVGIIALAEGIAVGRSFAMYKNYHIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMSIAVMLTLLFLTPLFYYTPLVVLAAIIVSAMLGLIDYEAAIHLWKIDKFDFFVCISAYMGVVFGSVEIGLVIAVAISVLRLLLFVARPRTFVLGNIPNSVIYRNIEHYPNANRVSGILILKIDAPIYFANASYLRERISRWIDEEEDRIKDTGETILNYVILDMSAVGNIDTSGISMLEETKKMAERRELQLVLVNPGSEVMKKLNKSSFQKDVGGNWIYLTVEDAVRACNFACKTNPKRDESEGWNNV