Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045087.t1 | XP_003602002.1 | 97.9 | 654 | 14 | 0 | 1 | 654 | 1 | 654 | 0.00E+00 | 1233 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045087.t1 | O04722 | 67.3 | 627 | 204 | 1 | 24 | 649 | 46 | 672 | 1.8e-241 | 836.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045087.t1 | G7J4D0 | 97.9 | 654 | 14 | 0 | 1 | 654 | 1 | 654 | 0.0e+00 | 1233.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045087.t1 | MTR_3g087740 | 97.859 | 654 | 14 | 0 | 1 | 654 | 1 | 654 | 0.0 | 1303 |
MS.gene045087.t1 | MTR_5g061860 | 62.673 | 651 | 232 | 5 | 12 | 653 | 2 | 650 | 0.0 | 838 |
MS.gene045087.t1 | MTR_3g073730 | 62.558 | 649 | 231 | 4 | 12 | 654 | 15 | 657 | 0.0 | 818 |
MS.gene045087.t1 | MTR_5g061860 | 64.919 | 553 | 186 | 3 | 12 | 556 | 2 | 554 | 0.0 | 738 |
MS.gene045087.t1 | MTR_3g087730 | 54.308 | 650 | 279 | 7 | 13 | 651 | 12 | 654 | 0.0 | 706 |
MS.gene045087.t1 | MTR_5g061880 | 55.872 | 596 | 256 | 4 | 57 | 649 | 56 | 647 | 0.0 | 694 |
MS.gene045087.t1 | MTR_3g073780 | 56.376 | 596 | 254 | 4 | 57 | 649 | 59 | 651 | 0.0 | 667 |
MS.gene045087.t1 | MTR_2g008470 | 53.120 | 593 | 274 | 4 | 57 | 648 | 61 | 650 | 0.0 | 615 |
MS.gene045087.t1 | MTR_2g008470 | 53.120 | 593 | 274 | 4 | 57 | 648 | 80 | 669 | 0.0 | 615 |
MS.gene045087.t1 | MTR_3g073780 | 57.143 | 532 | 223 | 3 | 57 | 586 | 59 | 587 | 0.0 | 611 |
MS.gene045087.t1 | MTR_3g073780 | 54.039 | 557 | 241 | 4 | 14 | 556 | 4 | 559 | 0.0 | 593 |
MS.gene045087.t1 | MTR_2g102243 | 47.249 | 618 | 319 | 5 | 40 | 653 | 29 | 643 | 0.0 | 580 |
MS.gene045087.t1 | MTR_4g011970 | 46.799 | 656 | 336 | 7 | 1 | 652 | 3 | 649 | 0.0 | 576 |
MS.gene045087.t1 | MTR_7g095430 | 47.557 | 614 | 315 | 5 | 40 | 649 | 24 | 634 | 0.0 | 573 |
MS.gene045087.t1 | MTR_1g071530 | 47.326 | 617 | 317 | 5 | 37 | 650 | 27 | 638 | 0.0 | 569 |
MS.gene045087.t1 | MTR_2g102243 | 48.029 | 558 | 282 | 5 | 40 | 592 | 29 | 583 | 0.0 | 537 |
MS.gene045087.t1 | MTR_4g084620 | 46.181 | 576 | 303 | 4 | 79 | 652 | 66 | 636 | 0.0 | 535 |
MS.gene045087.t1 | MTR_4g084640 | 42.337 | 659 | 346 | 8 | 2 | 651 | 5 | 638 | 2.15e-180 | 527 |
MS.gene045087.t1 | MTR_7g095430 | 47.455 | 550 | 283 | 4 | 40 | 586 | 24 | 570 | 9.26e-178 | 518 |
MS.gene045087.t1 | MTR_6g086170 | 42.978 | 591 | 327 | 5 | 62 | 650 | 42 | 624 | 9.21e-169 | 497 |
MS.gene045087.t1 | MTR_7g022870 | 35.117 | 598 | 366 | 10 | 59 | 649 | 54 | 636 | 2.08e-109 | 346 |
MS.gene045087.t1 | MTR_7g022870 | 35.768 | 534 | 322 | 9 | 59 | 586 | 54 | 572 | 5.06e-99 | 315 |
MS.gene045087.t1 | MTR_6g024420 | 47.191 | 89 | 36 | 1 | 277 | 365 | 89 | 166 | 3.24e-18 | 82.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045087.t1 | AT5G10180 | 67.357 | 628 | 204 | 1 | 23 | 649 | 45 | 672 | 0.0 | 881 |
MS.gene045087.t1 | AT1G77990 | 60.697 | 631 | 245 | 2 | 19 | 646 | 33 | 663 | 0.0 | 791 |
MS.gene045087.t1 | AT4G08620 | 56.304 | 579 | 250 | 3 | 75 | 652 | 67 | 643 | 0.0 | 650 |
MS.gene045087.t1 | AT1G22150 | 54.362 | 596 | 269 | 3 | 55 | 649 | 55 | 648 | 0.0 | 640 |
MS.gene045087.t1 | AT1G22150 | 54.362 | 596 | 269 | 3 | 55 | 649 | 55 | 648 | 0.0 | 640 |
MS.gene045087.t1 | AT1G22150 | 54.362 | 596 | 269 | 3 | 55 | 649 | 55 | 648 | 0.0 | 640 |
MS.gene045087.t1 | AT1G78000 | 54.362 | 596 | 269 | 3 | 55 | 649 | 52 | 645 | 0.0 | 624 |
MS.gene045087.t1 | AT1G78000 | 54.362 | 596 | 269 | 3 | 55 | 649 | 52 | 645 | 0.0 | 624 |
MS.gene045087.t1 | AT1G78000 | 54.362 | 596 | 269 | 3 | 55 | 649 | 52 | 645 | 0.0 | 624 |
MS.gene045087.t1 | AT1G78000 | 54.839 | 558 | 250 | 2 | 55 | 612 | 52 | 607 | 0.0 | 594 |
MS.gene045087.t1 | AT3G51895 | 46.720 | 625 | 327 | 5 | 27 | 649 | 62 | 682 | 0.0 | 585 |
MS.gene045087.t1 | AT3G51895 | 46.203 | 632 | 334 | 5 | 20 | 649 | 10 | 637 | 0.0 | 585 |
MS.gene045087.t1 | AT1G22150 | 50.853 | 586 | 283 | 4 | 3 | 586 | 2 | 584 | 0.0 | 582 |
MS.gene045087.t1 | AT1G78000 | 55.140 | 535 | 238 | 2 | 55 | 589 | 52 | 584 | 0.0 | 572 |
MS.gene045087.t1 | AT3G15990 | 46.677 | 617 | 320 | 6 | 40 | 651 | 33 | 645 | 0.0 | 565 |
MS.gene045087.t1 | AT1G23090 | 45.118 | 594 | 321 | 4 | 57 | 648 | 30 | 620 | 0.0 | 535 |
MS.gene045087.t1 | AT4G02700 | 44.677 | 620 | 328 | 8 | 37 | 649 | 16 | 627 | 2.00e-179 | 525 |
MS.gene045087.t1 | AT1G78000 | 57.883 | 444 | 187 | 0 | 55 | 498 | 52 | 495 | 1.88e-171 | 499 |
MS.gene045087.t1 | AT5G19600 | 42.169 | 581 | 321 | 6 | 74 | 652 | 59 | 626 | 1.09e-164 | 486 |
MS.gene045087.t1 | AT1G78000 | 54.989 | 451 | 201 | 2 | 139 | 589 | 1 | 449 | 1.12e-161 | 472 |
MS.gene045087.t1 | AT1G23090 | 44.196 | 491 | 269 | 4 | 160 | 648 | 1 | 488 | 2.60e-145 | 432 |
MS.gene045087.t1 | AT1G23090 | 44.196 | 491 | 269 | 4 | 160 | 648 | 1 | 488 | 2.60e-145 | 432 |
MS.gene045087.t1 | AT1G23090 | 44.196 | 491 | 269 | 4 | 160 | 648 | 1 | 488 | 2.60e-145 | 432 |
MS.gene045087.t1 | AT3G12520 | 36.254 | 582 | 349 | 10 | 75 | 649 | 47 | 613 | 9.05e-113 | 353 |
MS.gene045087.t1 | AT3G12520 | 36.254 | 582 | 349 | 10 | 75 | 649 | 63 | 629 | 1.79e-112 | 353 |
MS.gene045087.t1 | AT5G13550 | 36.256 | 593 | 342 | 13 | 71 | 649 | 72 | 642 | 5.34e-106 | 336 |
MS.gene045087.t1 | AT3G12520 | 37.295 | 488 | 285 | 9 | 75 | 556 | 63 | 535 | 1.75e-96 | 307 |
Find 136 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTATAGATGTTGCCAAAAT+TGG | 0.147839 | 3.4:+81348967 | MS.gene045087:CDS |
TAAATGAAGCTTACAAAATT+TGG | 0.156014 | 3.4:+81350338 | MS.gene045087:CDS |
ATACCTTTCTTTAACGAAAT+TGG | 0.161463 | 3.4:-81352904 | None:intergenic |
CATCCTAACTACTAGATTTC+TGG | 0.176456 | 3.4:+81348675 | MS.gene045087:CDS |
AGCAACAATAAGTCCAATTT+TGG | 0.188347 | 3.4:-81348980 | None:intergenic |
AAAGGAAGAAGAACCTATTT+TGG | 0.251709 | 3.4:+81348791 | MS.gene045087:CDS |
CAATTGATGCCAACCAAAAT+AGG | 0.258456 | 3.4:-81348804 | None:intergenic |
AAAATTGTGAAACATGTTAA+AGG | 0.263404 | 3.4:+81348895 | MS.gene045087:CDS |
GCTTGTGCTGGTGCCTTCTT+TGG | 0.265451 | 3.4:+81350385 | MS.gene045087:CDS |
TCAAACTTTGTCAACAAAAT+AGG | 0.270223 | 3.4:+81353775 | MS.gene045087:CDS |
AATTTATACTGCAGGGTAAA+AGG | 0.270631 | 3.4:+81348773 | MS.gene045087:intron |
GGTATCTTTCAAACTTCCTT+TGG | 0.278546 | 3.4:+81347444 | MS.gene045087:CDS |
CTGTCACATGCTGCAATTGT+TGG | 0.291169 | 3.4:+81347600 | MS.gene045087:CDS |
GACAGAGATTATGTCTGTTT+TGG | 0.295111 | 3.4:-81347697 | None:intergenic |
CTCTGTCTTGAAAGCTGTTT+GGG | 0.295702 | 3.4:+81347713 | MS.gene045087:CDS |
TTTCTTGCAACTCTCTTTGC+TGG | 0.296098 | 3.4:+81347423 | MS.gene045087:CDS |
ATCAAATGGGTCACTCAAAA+AGG | 0.303980 | 3.4:+81353026 | MS.gene045087:CDS |
CACCTCCGGAATTGCTTCTA+TGG | 0.307560 | 3.4:+81353420 | MS.gene045087:CDS |
TATCCTGGGAGGCTCATTCT+TGG | 0.312035 | 3.4:+81348648 | MS.gene045087:CDS |
GCAAACCTTGCTCCTCAATA+TGG | 0.318170 | 3.4:+81347058 | MS.gene045087:CDS |
CGACCAAGCACAGAAACTTT+AGG | 0.318996 | 3.4:+81352768 | MS.gene045087:CDS |
AAACTTCCTTTGGACTATTC+AGG | 0.330923 | 3.4:+81347454 | MS.gene045087:CDS |
ATCAAGTTGGTATCCTTTGA+TGG | 0.351175 | 3.4:-81349247 | None:intergenic |
CAACAGTTGAAGGGACTGTT+TGG | 0.351591 | 3.4:+81347657 | MS.gene045087:CDS |
AAATTGTGAAACATGTTAAA+GGG | 0.359971 | 3.4:+81348896 | MS.gene045087:CDS |
TCTCTGTCTTGAAAGCTGTT+TGG | 0.360550 | 3.4:+81347712 | MS.gene045087:CDS |
CTATTTGCTTCTGTGGAGAT+TGG | 0.361323 | 3.4:+81350412 | MS.gene045087:CDS |
CTTGACTTTCTTGCTTGTGC+TGG | 0.369935 | 3.4:+81350373 | MS.gene045087:CDS |
TCATTTCAAGGATCATCAAA+TGG | 0.381535 | 3.4:+81353012 | MS.gene045087:intron |
GCTACACTGTTGCTAAGTTT+AGG | 0.382970 | 3.4:+81346771 | MS.gene045087:CDS |
CCTATGGCAATTCAGATTCC+CGG | 0.385176 | 3.4:+81352834 | MS.gene045087:CDS |
TTCGTTGCTGTTATCATCAA+TGG | 0.386524 | 3.4:+81347347 | MS.gene045087:CDS |
TAACCAATTGGATCAGTAGA+AGG | 0.387370 | 3.4:-81347387 | None:intergenic |
GTTAAAGTCTAACTGATTGA+TGG | 0.387724 | 3.4:-81348935 | None:intergenic |
CCGCTTATCTACGCTGTAAT+GGG | 0.390859 | 3.4:+81347285 | MS.gene045087:CDS |
TTCCTCCATAGAAGCAATTC+CGG | 0.396969 | 3.4:-81353425 | None:intergenic |
GAAACTTTAGGAAAACTTCC+TGG | 0.399741 | 3.4:+81352780 | MS.gene045087:CDS |
TGCTAGTCTTTGTATTCCTC+AGG | 0.401203 | 3.4:+81346820 | MS.gene045087:CDS |
ATGAGCTTTGTATAACCAAT+TGG | 0.401366 | 3.4:-81347399 | None:intergenic |
ATCAAAGGATACCAACTTGA+TGG | 0.406300 | 3.4:+81349249 | MS.gene045087:CDS |
TTTCCTAAAGTTTCTGTGCT+TGG | 0.410600 | 3.4:-81352771 | None:intergenic |
AAGTGATATCATCACTGTTA+TGG | 0.416628 | 3.4:-81350230 | None:intergenic |
ACCTCCTGCTATGTTGCAAC+TGG | 0.423328 | 3.4:+81349321 | MS.gene045087:CDS |
TCTAACTGATTGATGGAACT+TGG | 0.427366 | 3.4:-81348928 | None:intergenic |
TCACCAGAAATCTAGTAGTT+AGG | 0.428939 | 3.4:-81348678 | None:intergenic |
CTTCTGCCCCAAACAAGAAT+AGG | 0.441826 | 3.4:-81346749 | None:intergenic |
CAATATGACTTCTTCAACAG+TGG | 0.450224 | 3.4:+81346508 | None:intergenic |
GTGATTCTCTCTGCATTACC+TGG | 0.450525 | 3.4:+81350304 | MS.gene045087:CDS |
ACTGAAGCAATAATAGCAAT+TGG | 0.451582 | 3.4:-81350283 | None:intergenic |
TCACAGAACAGATCGGTTCC+AGG | 0.455205 | 3.4:-81352798 | None:intergenic |
ATGCCAATTTCGTTAAAGAA+AGG | 0.460508 | 3.4:+81352901 | MS.gene045087:CDS |
ACCGCTTATCTACGCTGTAA+TGG | 0.465139 | 3.4:+81347284 | MS.gene045087:CDS |
CTGCATATCCTCAAAGGTGC+AGG | 0.468675 | 3.4:-81346534 | None:intergenic |
CAGCCACATGCCAAGGACTT+GGG | 0.470723 | 3.4:-81346622 | None:intergenic |
AACAAAGAGATGATGTCAAT+AGG | 0.476714 | 3.4:+81349273 | MS.gene045087:CDS |
AGCAAATAGTACACCAAAGA+AGG | 0.478871 | 3.4:-81350398 | None:intergenic |
ACATCAAGAGAAATAGCAAT+TGG | 0.480431 | 3.4:+81347309 | MS.gene045087:CDS |
ACAGCCACATGCCAAGGACT+TGG | 0.481415 | 3.4:-81346623 | None:intergenic |
GCAATTGTTGGATTTGTAGC+AGG | 0.489329 | 3.4:+81347612 | MS.gene045087:CDS |
CCTCCCAGGATAAAATTATG+AGG | 0.494655 | 3.4:-81348637 | None:intergenic |
CATTTCAAGGATCATCAAAT+GGG | 0.494851 | 3.4:+81353013 | MS.gene045087:intron |
AGAATGTTCAGCAGGATGTA+AGG | 0.495220 | 3.4:+81346570 | MS.gene045087:CDS |
CTATGGCAATTCAGATTCCC+GGG | 0.499013 | 3.4:+81352835 | MS.gene045087:CDS |
AGCAATTGGTCCTGTGGCAG+TGG | 0.499663 | 3.4:+81347323 | MS.gene045087:CDS |
GACCCTTCTACTGATCCAAT+TGG | 0.501614 | 3.4:+81347384 | MS.gene045087:CDS |
GCAGGAGCTGCCATTGTGAT+TGG | 0.504037 | 3.4:+81347630 | MS.gene045087:CDS |
TGGTGTACTATTTGCTTCTG+TGG | 0.508569 | 3.4:+81350405 | MS.gene045087:CDS |
ACAGCTGTTAATTATGCTGC+TGG | 0.510483 | 3.4:+81350175 | MS.gene045087:CDS |
CATGTTTCAATGTAGAGCAT+AGG | 0.511277 | 3.4:+81347022 | MS.gene045087:intron |
AGTGGAACCCTGCACCTTTG+AGG | 0.512094 | 3.4:+81346526 | MS.gene045087:CDS |
TTATAGGAATCTGTTGCTGT+TGG | 0.512660 | 3.4:+81349210 | MS.gene045087:intron |
TCTCTTTGTTTCCATCAAGT+TGG | 0.512891 | 3.4:-81349260 | None:intergenic |
ATAGGCTTCACAAACATCAT+AGG | 0.513032 | 3.4:+81349291 | MS.gene045087:CDS |
CCTTGAGAAGAATGTTCAGC+AGG | 0.521003 | 3.4:+81346562 | MS.gene045087:CDS |
TTTAATATCAAACATTGTGA+TGG | 0.523087 | 3.4:+81350207 | MS.gene045087:CDS |
TCATTTATGTCTATGAGTCC+AGG | 0.523123 | 3.4:-81350322 | None:intergenic |
GATGACAAGGGAAATTCAAA+AGG | 0.524692 | 3.4:+81353056 | MS.gene045087:CDS |
CTGCACCTTTGAGGATATGC+AGG | 0.529377 | 3.4:+81346535 | MS.gene045087:CDS |
GATTGGTCTTCAACAGTTGA+AGG | 0.534417 | 3.4:+81347647 | MS.gene045087:CDS |
TTTGTCTACACATGGAAAGC+AGG | 0.534478 | 3.4:+81353459 | MS.gene045087:CDS |
ACACCAAGAATGAGCCTCCC+AGG | 0.537266 | 3.4:-81348651 | None:intergenic |
TAACAGGTTGGGGTTCCTTG+TGG | 0.537909 | 3.4:+81347572 | MS.gene045087:intron |
ATGTGGCTGTAGATTCTTTG+AGG | 0.539831 | 3.4:+81346636 | MS.gene045087:CDS |
TTGTGTATCACTTGCCACCT+CGG | 0.540238 | 3.4:-81353742 | None:intergenic |
AGTACCAGTTGCAACATAGC+AGG | 0.544189 | 3.4:-81349325 | None:intergenic |
TGAAGCTTACAAAATTTGGA+AGG | 0.547138 | 3.4:+81350342 | MS.gene045087:CDS |
AGCCACATGCCAAGGACTTG+GGG | 0.550486 | 3.4:-81346621 | None:intergenic |
AGCAACGAAACCACTGCCAC+AGG | 0.553209 | 3.4:-81347333 | None:intergenic |
GAATCTACAGCCACATGCCA+AGG | 0.554742 | 3.4:-81346629 | None:intergenic |
CAACCTGCAAAACTGAAAGT+AGG | 0.562947 | 3.4:-81346721 | None:intergenic |
AAAGTCCATATTGAGGAGCA+AGG | 0.564726 | 3.4:-81347063 | None:intergenic |
AAAAGGATTGGAAGATGACA+AGG | 0.575608 | 3.4:+81353043 | MS.gene045087:CDS |
AATTGTGAAACATGTTAAAG+GGG | 0.579312 | 3.4:+81348897 | MS.gene045087:CDS |
AGCTTACAAAGTCCATATTG+AGG | 0.583569 | 3.4:-81347070 | None:intergenic |
ATACGTATTATCATAACCCC+GGG | 0.586229 | 3.4:-81352852 | None:intergenic |
TACAAATGTTTGTCTACACA+TGG | 0.587075 | 3.4:+81353451 | MS.gene045087:CDS |
TTGCCACCTCGGATTTGCAA+TGG | 0.587105 | 3.4:-81353731 | None:intergenic |
GCAAGTGATACACAAGCTAA+AGG | 0.587263 | 3.4:+81353750 | MS.gene045087:CDS |
GTCAAGAATGACAAGTTGAA+TGG | 0.587521 | 3.4:-81353081 | None:intergenic |
CCTGCTGAACATTCTTCTCA+AGG | 0.592117 | 3.4:-81346562 | None:intergenic |
CCGGGAATCTGAATTGCCAT+AGG | 0.592416 | 3.4:-81352834 | None:intergenic |
TGTGGAGATTGGTCTTCTAG+TGG | 0.595857 | 3.4:+81350423 | MS.gene045087:CDS |
CATACGTATTATCATAACCC+CGG | 0.597022 | 3.4:-81352853 | None:intergenic |
TAATGATTTACTCACAGTAA+GGG | 0.597465 | 3.4:-81349010 | None:intergenic |
GCAGGATGTAAGGTCTCAGT+GGG | 0.600047 | 3.4:+81346580 | MS.gene045087:CDS |
TTGGTGAACATTGACACCTC+CGG | 0.600078 | 3.4:+81353406 | MS.gene045087:CDS |
ATTGGTCTTCAACAGTTGAA+GGG | 0.601705 | 3.4:+81347648 | MS.gene045087:CDS |
GTCCACCTGCATATCCTCAA+AGG | 0.606805 | 3.4:-81346540 | None:intergenic |
GAGCATAGGATATGCAACAT+TGG | 0.607902 | 3.4:+81347036 | MS.gene045087:intron |
TGATGTTGATCAGTATCCTA+TGG | 0.611939 | 3.4:+81352818 | MS.gene045087:CDS |
AACCAATTGGATCAGTAGAA+GGG | 0.611963 | 3.4:-81347386 | None:intergenic |
GACAATATAACTGATACAAG+TGG | 0.621918 | 3.4:-81348829 | None:intergenic |
CCCATTACAGCGTAGATAAG+CGG | 0.624118 | 3.4:-81347285 | None:intergenic |
AGAAATAGCAATTGGTCCTG+TGG | 0.627791 | 3.4:+81347317 | MS.gene045087:CDS |
CTCCGGAATTGCTTCTATGG+AGG | 0.630529 | 3.4:+81353423 | MS.gene045087:CDS |
TGCATATCCTCAAAGGTGCA+GGG | 0.631006 | 3.4:-81346533 | None:intergenic |
CTCCCAGGATAAAATTATGA+GGG | 0.631885 | 3.4:-81348636 | None:intergenic |
CACCTTTGAGGATATGCAGG+TGG | 0.639656 | 3.4:+81346538 | MS.gene045087:CDS |
TACAAAGACTAGCAATAGTG+AGG | 0.640532 | 3.4:-81346811 | None:intergenic |
AACTTTGTCAACAAAATAGG+TGG | 0.642212 | 3.4:+81353778 | MS.gene045087:CDS |
TTGGCAACATCTATAACATG+AGG | 0.642623 | 3.4:-81348961 | None:intergenic |
AGTTGGCCATTGCAAATCCG+AGG | 0.642668 | 3.4:+81353725 | MS.gene045087:intron |
GGAGATTGGTCTTCTAGTGG+CGG | 0.651104 | 3.4:+81350426 | MS.gene045087:CDS |
AGCAGGATGTAAGGTCTCAG+TGG | 0.652010 | 3.4:+81346579 | MS.gene045087:CDS |
TCTCTAAGTGATCAATCATG+TGG | 0.653134 | 3.4:+81346692 | MS.gene045087:CDS |
ATCAACATCACAGAACAGAT+CGG | 0.657581 | 3.4:-81352805 | None:intergenic |
GCCACATGCCAAGGACTTGG+GGG | 0.661179 | 3.4:-81346620 | None:intergenic |
CTCCATAGAAGCAATTCCGG+AGG | 0.672446 | 3.4:-81353422 | None:intergenic |
ACCAGTTGCAACATAGCAGG+AGG | 0.674997 | 3.4:-81349322 | None:intergenic |
ATTGTGAAACATGTTAAAGG+GGG | 0.682427 | 3.4:+81348898 | MS.gene045087:CDS |
TGGCCATTGCAAATCCGAGG+TGG | 0.687093 | 3.4:+81353728 | MS.gene045087:CDS |
TATGGCAATTCAGATTCCCG+GGG | 0.688950 | 3.4:+81352836 | MS.gene045087:CDS |
AAAGGATTGGAAGATGACAA+GGG | 0.694432 | 3.4:+81353044 | MS.gene045087:CDS |
ATTACAGCGTAGATAAGCGG+TGG | 0.699477 | 3.4:-81347282 | None:intergenic |
CATGTGACAGAAAATCCACA+AGG | 0.704335 | 3.4:-81347587 | None:intergenic |
CTGTTGAAGACCAATCACAA+TGG | 0.727102 | 3.4:-81347640 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 81346512 | 81353858 | 81346512 | ID=MS.gene045087 |
chr3.4 | mRNA | 81346512 | 81353858 | 81346512 | ID=MS.gene045087.t1;Parent=MS.gene045087 |
chr3.4 | exon | 81346512 | 81346841 | 81346512 | ID=MS.gene045087.t1.exon1;Parent=MS.gene045087.t1 |
chr3.4 | CDS | 81346512 | 81346841 | 81346512 | ID=cds.MS.gene045087.t1;Parent=MS.gene045087.t1 |
chr3.4 | exon | 81347037 | 81347085 | 81347037 | ID=MS.gene045087.t1.exon2;Parent=MS.gene045087.t1 |
chr3.4 | CDS | 81347037 | 81347085 | 81347037 | ID=cds.MS.gene045087.t1;Parent=MS.gene045087.t1 |
chr3.4 | exon | 81347268 | 81347475 | 81347268 | ID=MS.gene045087.t1.exon3;Parent=MS.gene045087.t1 |
chr3.4 | CDS | 81347268 | 81347475 | 81347268 | ID=cds.MS.gene045087.t1;Parent=MS.gene045087.t1 |
chr3.4 | exon | 81347578 | 81347752 | 81347578 | ID=MS.gene045087.t1.exon4;Parent=MS.gene045087.t1 |
chr3.4 | CDS | 81347578 | 81347752 | 81347578 | ID=cds.MS.gene045087.t1;Parent=MS.gene045087.t1 |
chr3.4 | exon | 81348631 | 81348696 | 81348631 | ID=MS.gene045087.t1.exon5;Parent=MS.gene045087.t1 |
chr3.4 | CDS | 81348631 | 81348696 | 81348631 | ID=cds.MS.gene045087.t1;Parent=MS.gene045087.t1 |
chr3.4 | exon | 81348787 | 81349017 | 81348787 | ID=MS.gene045087.t1.exon6;Parent=MS.gene045087.t1 |
chr3.4 | CDS | 81348787 | 81349017 | 81348787 | ID=cds.MS.gene045087.t1;Parent=MS.gene045087.t1 |
chr3.4 | exon | 81349216 | 81349342 | 81349216 | ID=MS.gene045087.t1.exon7;Parent=MS.gene045087.t1 |
chr3.4 | CDS | 81349216 | 81349342 | 81349216 | ID=cds.MS.gene045087.t1;Parent=MS.gene045087.t1 |
chr3.4 | exon | 81350161 | 81350447 | 81350161 | ID=MS.gene045087.t1.exon8;Parent=MS.gene045087.t1 |
chr3.4 | CDS | 81350161 | 81350447 | 81350161 | ID=cds.MS.gene045087.t1;Parent=MS.gene045087.t1 |
chr3.4 | exon | 81352729 | 81352922 | 81352729 | ID=MS.gene045087.t1.exon9;Parent=MS.gene045087.t1 |
chr3.4 | CDS | 81352729 | 81352922 | 81352729 | ID=cds.MS.gene045087.t1;Parent=MS.gene045087.t1 |
chr3.4 | exon | 81353022 | 81353110 | 81353022 | ID=MS.gene045087.t1.exon10;Parent=MS.gene045087.t1 |
chr3.4 | CDS | 81353022 | 81353110 | 81353022 | ID=cds.MS.gene045087.t1;Parent=MS.gene045087.t1 |
chr3.4 | exon | 81353404 | 81353480 | 81353404 | ID=MS.gene045087.t1.exon11;Parent=MS.gene045087.t1 |
chr3.4 | CDS | 81353404 | 81353480 | 81353404 | ID=cds.MS.gene045087.t1;Parent=MS.gene045087.t1 |
chr3.4 | exon | 81353727 | 81353858 | 81353727 | ID=MS.gene045087.t1.exon12;Parent=MS.gene045087.t1 |
chr3.4 | CDS | 81353727 | 81353858 | 81353727 | ID=cds.MS.gene045087.t1;Parent=MS.gene045087.t1 |
Gene Sequence |
Protein sequence |