Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007334.t1 | XP_013450065.1 | 99.4 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 2.20E-62 | 248.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007334.t1 | O65743 | 94.5 | 163 | 8 | 1 | 1 | 162 | 1 | 163 | 8.0e-61 | 234.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007334.t1 | I3SKQ8 | 99.4 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.6e-62 | 248.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene007334 | MS.gene47371 | PPI |
| MS.gene065297 | MS.gene007334 | PPI |
| MS.gene47371 | MS.gene007334 | PPI |
| MS.gene007336 | MS.gene007334 | PPI |
| MS.gene013335 | MS.gene007334 | PPI |
| MS.gene007607 | MS.gene007334 | PPI |
| MS.gene23040 | MS.gene007334 | PPI |
| MS.gene24639 | MS.gene007334 | PPI |
| MS.gene020578 | MS.gene007334 | PPI |
| MS.gene034951 | MS.gene007334 | PPI |
| MS.gene020577 | MS.gene007334 | PPI |
| MS.gene007335 | MS.gene007334 | PPI |
| MS.gene30990 | MS.gene007334 | PPI |
| MS.gene06433 | MS.gene007334 | PPI |
| MS.gene049306 | MS.gene007334 | PPI |
| MS.gene07704 | MS.gene007334 | PPI |
| MS.gene007610 | MS.gene007334 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007334.t1 | MTR_7g103320 | 99.387 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.54e-116 | 327 |
| MS.gene007334.t1 | MTR_7g103320 | 99.387 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.54e-116 | 327 |
| MS.gene007334.t1 | MTR_7g103320 | 99.387 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.54e-116 | 327 |
| MS.gene007334.t1 | MTR_1g061670 | 94.667 | 150 | 7 | 1 | 1 | 149 | 1 | 150 | 2.40e-89 | 258 |
| MS.gene007334.t1 | MTR_4g104930 | 79.630 | 54 | 10 | 1 | 43 | 96 | 13 | 65 | 2.16e-23 | 87.8 |
| MS.gene007334.t1 | MTR_4g055270 | 37.895 | 95 | 57 | 1 | 3 | 95 | 1 | 95 | 1.05e-18 | 78.6 |
| MS.gene007334.t1 | MTR_2g084925 | 35.484 | 93 | 58 | 1 | 3 | 93 | 1 | 93 | 3.11e-15 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007334.t1 | AT2G36620 | 89.172 | 157 | 16 | 1 | 1 | 156 | 1 | 157 | 1.36e-88 | 256 |
| MS.gene007334.t1 | AT3G53020 | 89.933 | 149 | 14 | 1 | 1 | 149 | 1 | 148 | 7.35e-84 | 244 |
| MS.gene007334.t1 | AT2G44860 | 37.500 | 128 | 67 | 5 | 3 | 126 | 1 | 119 | 3.26e-18 | 77.0 |
| MS.gene007334.t1 | AT2G44860 | 37.500 | 128 | 67 | 5 | 3 | 126 | 1 | 119 | 3.26e-18 | 77.0 |
Find 53 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATGCTACCTCGGCTTTCT+TGG | 0.251083 | 7.4:-7847536 | None:intergenic |
| CCTAAAATGGGCGGTGGTGG+TGG | 0.259183 | 7.4:+7847613 | MS.gene007334:CDS |
| TATGCCCAAGGGTCCTAAAA+TGG | 0.286938 | 7.4:+7847600 | MS.gene007334:CDS |
| ATCTCGAACCTCGGGCTTCT+CGG | 0.307520 | 7.4:-7847176 | None:intergenic |
| CTTGTGCTGCTTTCTGTACA+TGG | 0.329814 | 7.4:-7846819 | None:intergenic |
| GGACCTGGAGTATGGCTTCT+TGG | 0.357806 | 7.4:-7847113 | None:intergenic |
| GCAGTCCATGTGAGCTTTGA+AGG | 0.357906 | 7.4:-7846797 | None:intergenic |
| GAAAGCCGAGGTAGCATCTA+AGG | 0.361381 | 7.4:+7847540 | MS.gene007334:CDS |
| CTCAAGAAGCGGTGAAGAAA+AGG | 0.395866 | 7.4:+7847080 | MS.gene007334:CDS |
| ATAAATCTGATCCCTCTTCC+TGG | 0.395884 | 7.4:-7846566 | None:intergenic |
| GCATCTAAGGCACAAAAGTC+AGG | 0.405098 | 7.4:+7847553 | MS.gene007334:CDS |
| CCAACAATGGACCTGGAGTA+TGG | 0.414209 | 7.4:-7847121 | None:intergenic |
| ATTTATTCGTAGTGATTCTC+AGG | 0.428494 | 7.4:+7846583 | MS.gene007334:CDS |
| CCTAGCAGCATCTCGAACCT+CGG | 0.438375 | 7.4:-7847185 | None:intergenic |
| GGTCCTAAAATGGGCGGTGG+TGG | 0.445895 | 7.4:+7847610 | MS.gene007334:CDS |
| TTGTGAACTCAAAATGTAAG+AGG | 0.457107 | 7.4:+7846753 | MS.gene007334:CDS |
| TCAAAGATTTACCCAGGAAG+AGG | 0.465260 | 7.4:+7846554 | MS.gene007334:CDS |
| TTGAAGGCTTCAACTTGTTG+TGG | 0.467148 | 7.4:-7846781 | None:intergenic |
| ATGCCCAAGGGTCCTAAAAT+GGG | 0.479062 | 7.4:+7847601 | MS.gene007334:CDS |
| CTGCTAGGGAAGCTGCTCTT+CGG | 0.488937 | 7.4:+7847200 | MS.gene007334:CDS |
| CCATACTCCAGGTCCATTGT+TGG | 0.499932 | 7.4:+7847121 | MS.gene007334:CDS |
| TCAATCCTGCAGTGAAATCA+AGG | 0.504323 | 7.4:+7847480 | MS.gene007334:intron |
| CTAGCAGCATCTCGAACCTC+GGG | 0.515819 | 7.4:-7847184 | None:intergenic |
| CTAAAATGGGCGGTGGTGGT+GGG | 0.525722 | 7.4:+7847614 | MS.gene007334:CDS |
| CCGAGGTTCGAGATGCTGCT+AGG | 0.531808 | 7.4:+7847185 | MS.gene007334:CDS |
| CGAGGTTCGAGATGCTGCTA+GGG | 0.538000 | 7.4:+7847186 | MS.gene007334:CDS |
| CCTGGAGTATGGCTTCTTGG+TGG | 0.554085 | 7.4:-7847110 | None:intergenic |
| TAAATCTGATCCCTCTTCCT+GGG | 0.554260 | 7.4:-7846565 | None:intergenic |
| TGAAGCCTTCAAAGCTCACA+TGG | 0.563280 | 7.4:+7846792 | MS.gene007334:CDS |
| TTGTGCCTTAGATGCTACCT+CGG | 0.575585 | 7.4:-7847545 | None:intergenic |
| AGGGAAGGGAAATGTTCAGA+AGG | 0.577296 | 7.4:+7847573 | MS.gene007334:CDS |
| TTCAAGTGTAGCACCAACAA+TGG | 0.581573 | 7.4:-7847134 | None:intergenic |
| AAGGGTCCTAAAATGGGCGG+TGG | 0.584819 | 7.4:+7847607 | MS.gene007334:CDS |
| TCAGAAGGGTGCTATGCCCA+AGG | 0.589737 | 7.4:+7847588 | MS.gene007334:CDS |
| TAAGGCACAAAAGTCAGGGA+AGG | 0.594983 | 7.4:+7847558 | MS.gene007334:CDS |
| CAAAGATTTACCCAGGAAGA+GGG | 0.595056 | 7.4:+7846555 | MS.gene007334:CDS |
| ACTGAACTCTGTCGATTCAG+TGG | 0.599671 | 7.4:+7846530 | MS.gene007334:CDS |
| CCACCAAGAAGCCATACTCC+AGG | 0.600767 | 7.4:+7847110 | MS.gene007334:CDS |
| CAGAAGGGTGCTATGCCCAA+GGG | 0.602938 | 7.4:+7847589 | MS.gene007334:CDS |
| TAAAACTTACTTTAGAACCA+TGG | 0.603222 | 7.4:-7845963 | None:intergenic |
| AGTATGGCTTCTTGGTGGCA+CGG | 0.604625 | 7.4:-7847105 | None:intergenic |
| CATCTAAGGCACAAAAGTCA+GGG | 0.612277 | 7.4:+7847554 | MS.gene007334:CDS |
| TGTAGCACCAACAATGGACC+TGG | 0.616016 | 7.4:-7847128 | None:intergenic |
| AAGGCACAAAAGTCAGGGAA+GGG | 0.622311 | 7.4:+7847559 | MS.gene007334:CDS |
| AGTGGCTCAAAGATTTACCC+AGG | 0.630927 | 7.4:+7846548 | MS.gene007334:CDS |
| GAAAAGAACCGAGAAGCCCG+AGG | 0.642434 | 7.4:+7847168 | MS.gene007334:CDS |
| GCAGGACATTGCTCAAGAAG+CGG | 0.647206 | 7.4:+7847069 | MS.gene007334:intron |
| GTACAGAAAGCAGCACAAGA+AGG | 0.650232 | 7.4:+7846823 | MS.gene007334:CDS |
| CCCAAGGGTCCTAAAATGGG+CGG | 0.653433 | 7.4:+7847604 | MS.gene007334:CDS |
| GGGAAGGGAAATGTTCAGAA+GGG | 0.653491 | 7.4:+7847574 | MS.gene007334:CDS |
| AAAGAAAGCCAAGAAAGCCG+AGG | 0.666450 | 7.4:+7847528 | MS.gene007334:CDS |
| GGAGAGGATAAAGAAAACCA+AGG | 0.682479 | 7.4:+7847501 | MS.gene007334:CDS |
| CCTGCAGTGAAATCAAGGAG+AGG | 0.683831 | 7.4:+7847485 | MS.gene007334:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCTTTTTTCTTTTTTT+CGG | + | chr7.4:7847269-7847288 | MS.gene007334:intron | 10.0% |
| !! | AAAGAAAAAAAAAAAAAGAG+AGG | - | chr7.4:7847258-7847277 | None:intergenic | 15.0% |
| !! | CTAAAAATTGAAATTACAAT+AGG | - | chr7.4:7846300-7846319 | None:intergenic | 15.0% |
| !!! | ATCTTAGTTTTATTGATATA+AGG | + | chr7.4:7846695-7846714 | MS.gene007334:intron | 15.0% |
| !!! | GTTTTTTTTATTGTTTTTAC+AGG | + | chr7.4:7846721-7846740 | MS.gene007334:intron | 15.0% |
| !!! | TTAATGTCTAAAAATTTGTT+TGG | + | chr7.4:7846116-7846135 | MS.gene007334:intron | 15.0% |
| !! | AAAATTGAATGTGTAAATGA+TGG | - | chr7.4:7846004-7846023 | None:intergenic | 20.0% |
| !! | AAATCAACCAAAAATATGAT+GGG | - | chr7.4:7846214-7846233 | None:intergenic | 20.0% |
| !! | TAAATCAACCAAAAATATGA+TGG | - | chr7.4:7846215-7846234 | None:intergenic | 20.0% |
| !!! | CATTTACACATTCAATTTTA+GGG | + | chr7.4:7846005-7846024 | MS.gene007334:intron | 20.0% |
| !!! | TAATTTCAATTTTTAGTGAG+TGG | + | chr7.4:7846304-7846323 | MS.gene007334:intron | 20.0% |
| !!! | TCATTTACACATTCAATTTT+AGG | + | chr7.4:7846004-7846023 | MS.gene007334:intron | 20.0% |
| !!! | TTGAAAATTAGACATGTTTT+TGG | + | chr7.4:7846266-7846285 | MS.gene007334:intron | 20.0% |
| ! | AAAACAGTGATGAAATTACA+TGG | - | chr7.4:7847389-7847408 | None:intergenic | 25.0% |
| ! | ACAGTAAGTAGTAAAATTAC+TGG | - | chr7.4:7847017-7847036 | None:intergenic | 25.0% |
| ! | CATATCTAATGTACTTCTAA+TGG | - | chr7.4:7846365-7846384 | None:intergenic | 25.0% |
| ! | GAGATAAAAATGATTCATGT+TGG | + | chr7.4:7846607-7846626 | MS.gene007334:intron | 25.0% |
| !! | AAATGATTCATGTTGGATTT+TGG | + | chr7.4:7846614-7846633 | MS.gene007334:intron | 25.0% |
| !! | ATTACTAACTTTTCCAAACA+AGG | - | chr7.4:7846492-7846511 | None:intergenic | 25.0% |
| !! | TTACTAACTTTTCCAAACAA+GGG | - | chr7.4:7846491-7846510 | None:intergenic | 25.0% |
| !! | TTCATTGAGAACTCTTTTTA+TGG | + | chr7.4:7847325-7847344 | MS.gene007334:intron | 25.0% |
| !!! | GTAATTTCATCACTGTTTTT+TGG | + | chr7.4:7847390-7847409 | MS.gene007334:intron | 25.0% |
| !!! | TGTGTAACTTTTAAGAATGT+TGG | + | chr7.4:7846386-7846405 | MS.gene007334:intron | 25.0% |
| AATTGTGTAACAGGAAAAAC+AGG | - | chr7.4:7847434-7847453 | None:intergenic | 30.0% | |
| AGTAGTAAAATTACTGGACA+AGG | - | chr7.4:7847011-7847030 | None:intergenic | 30.0% | |
| ATTTATTCGTAGTGATTCTC+AGG | + | chr7.4:7846583-7846602 | MS.gene007334:CDS | 30.0% | |
| CAAAATGCAATAACAGTGAA+TGG | - | chr7.4:7846433-7846452 | None:intergenic | 30.0% | |
| CAAGGCTATCTAATAGAATT+AGG | - | chr7.4:7846993-7847012 | None:intergenic | 30.0% | |
| CATGTTCAGAAGCTTAATTT+AGG | - | chr7.4:7846907-7846926 | None:intergenic | 30.0% | |
| GTCATCAATAATTGTGTAAC+AGG | - | chr7.4:7847443-7847462 | None:intergenic | 30.0% | |
| TTGTGAACTCAAAATGTAAG+AGG | + | chr7.4:7846753-7846772 | MS.gene007334:CDS | 30.0% | |
| ! | TCAAGTACCCATCATATTTT+TGG | + | chr7.4:7846204-7846223 | MS.gene007334:intron | 30.0% |
| !!! | TACATTTTGAGTTCACAAAG+AGG | - | chr7.4:7846751-7846770 | None:intergenic | 30.0% |
| !!! | TGCATTTTGATTGAACTAGT+GGG | + | chr7.4:7846444-7846463 | MS.gene007334:intron | 30.0% |
| !!! | TTGCATTTTGATTGAACTAG+TGG | + | chr7.4:7846443-7846462 | MS.gene007334:intron | 30.0% |
| AATGTAACTAGGTTCATGGA+TGG | - | chr7.4:7846944-7846963 | None:intergenic | 35.0% | |
| CAACAATGTAACTAGGTTCA+TGG | - | chr7.4:7846948-7846967 | None:intergenic | 35.0% | |
| GAATTTATTGCACCCTTGTT+TGG | + | chr7.4:7846476-7846495 | MS.gene007334:intron | 35.0% | |
| GATTCATCAACTAAACCCTA+CGG | - | chr7.4:7846063-7846082 | None:intergenic | 35.0% | |
| GTAACCACAACAATGTAACT+AGG | - | chr7.4:7846955-7846974 | None:intergenic | 35.0% | |
| TGAACCTAGTTACATTGTTG+TGG | + | chr7.4:7846948-7846967 | MS.gene007334:intron | 35.0% | |
| !! | CTTTCTATTATGCTGACTCT+GGG | + | chr7.4:7847231-7847250 | MS.gene007334:intron | 35.0% |
| !!! | TAGTGAGTGGCTTTTGAAAT+CGG | + | chr7.4:7846317-7846336 | MS.gene007334:intron | 35.0% |
| ATAAATCTGATCCCTCTTCC+TGG | - | chr7.4:7846569-7846588 | None:intergenic | 40.0% | |
| ATATTATGCATCTGTCGTGC+AGG | + | chr7.4:7847051-7847070 | MS.gene007334:intron | 40.0% | |
| ATTTCACTGCAGGATTGACT+CGG | - | chr7.4:7847478-7847497 | None:intergenic | 40.0% | |
| CAAAGATTTACCCAGGAAGA+GGG | + | chr7.4:7846555-7846574 | MS.gene007334:CDS | 40.0% | |
| CCAGAGTCAGCATAATAGAA+AGG | - | chr7.4:7847233-7847252 | None:intergenic | 40.0% | |
| GGAGAGGATAAAGAAAACCA+AGG | + | chr7.4:7847501-7847520 | MS.gene007334:CDS | 40.0% | |
| TAAACCCTACGGCAACAAAA+TGG | - | chr7.4:7846052-7846071 | None:intergenic | 40.0% | |
| TAAATCTGATCCCTCTTCCT+GGG | - | chr7.4:7846568-7846587 | None:intergenic | 40.0% | |
| TCAAAGATTTACCCAGGAAG+AGG | + | chr7.4:7846554-7846573 | MS.gene007334:CDS | 40.0% | |
| TCAATCCTGCAGTGAAATCA+AGG | + | chr7.4:7847480-7847499 | MS.gene007334:intron | 40.0% | |
| TTCAAGTGTAGCACCAACAA+TGG | - | chr7.4:7847137-7847156 | None:intergenic | 40.0% | |
| ! | CATCTAAGGCACAAAAGTCA+GGG | + | chr7.4:7847554-7847573 | MS.gene007334:CDS | 40.0% |
| ! | TTCTCCATTTTGTTGCCGTA+GGG | + | chr7.4:7846045-7846064 | MS.gene007334:intron | 40.0% |
| ! | TTTCTCCATTTTGTTGCCGT+AGG | + | chr7.4:7846044-7846063 | MS.gene007334:intron | 40.0% |
| !! | CCTTTCTATTATGCTGACTC+TGG | + | chr7.4:7847230-7847249 | MS.gene007334:intron | 40.0% |
| !! | CTTGGCTTTCTTTTCATCCT+TGG | - | chr7.4:7847521-7847540 | None:intergenic | 40.0% |
| !! | GACAGAGTTCAGTTCTGAAA+TGG | - | chr7.4:7846523-7846542 | None:intergenic | 40.0% |
| !! | TTGAAGGCTTCAACTTGTTG+TGG | - | chr7.4:7846784-7846803 | None:intergenic | 40.0% |
| AAAGAAAGCCAAGAAAGCCG+AGG | + | chr7.4:7847528-7847547 | MS.gene007334:CDS | 45.0% | |
| AAGGCACAAAAGTCAGGGAA+GGG | + | chr7.4:7847559-7847578 | MS.gene007334:CDS | 45.0% | |
| AGGGAAGGGAAATGTTCAGA+AGG | + | chr7.4:7847573-7847592 | MS.gene007334:CDS | 45.0% | |
| AGTGGCTCAAAGATTTACCC+AGG | + | chr7.4:7846548-7846567 | MS.gene007334:CDS | 45.0% | |
| ATGCCCAAGGGTCCTAAAAT+GGG | + | chr7.4:7847601-7847620 | MS.gene007334:CDS | 45.0% | |
| CTCAAGAAGCGGTGAAGAAA+AGG | + | chr7.4:7847080-7847099 | MS.gene007334:CDS | 45.0% | |
| GGGAAGGGAAATGTTCAGAA+GGG | + | chr7.4:7847574-7847593 | MS.gene007334:CDS | 45.0% | |
| GTACAGAAAGCAGCACAAGA+AGG | + | chr7.4:7846823-7846842 | MS.gene007334:CDS | 45.0% | |
| TAAGGCACAAAAGTCAGGGA+AGG | + | chr7.4:7847558-7847577 | MS.gene007334:CDS | 45.0% | |
| TATGCCCAAGGGTCCTAAAA+TGG | + | chr7.4:7847600-7847619 | MS.gene007334:CDS | 45.0% | |
| TGAAGCCTTCAAAGCTCACA+TGG | + | chr7.4:7846792-7846811 | MS.gene007334:CDS | 45.0% | |
| TTGTGCCTTAGATGCTACCT+CGG | - | chr7.4:7847548-7847567 | None:intergenic | 45.0% | |
| ! | GCATCTAAGGCACAAAAGTC+AGG | + | chr7.4:7847553-7847572 | MS.gene007334:CDS | 45.0% |
| !! | ACTGAACTCTGTCGATTCAG+TGG | + | chr7.4:7846530-7846549 | MS.gene007334:CDS | 45.0% |
| !! | CTTGTGCTGCTTTCTGTACA+TGG | - | chr7.4:7846822-7846841 | None:intergenic | 45.0% |
| AGATGCTACCTCGGCTTTCT+TGG | - | chr7.4:7847539-7847558 | None:intergenic | 50.0% | |
| CCAACAATGGACCTGGAGTA+TGG | - | chr7.4:7847124-7847143 | None:intergenic | 50.0% | |
| CCATACTCCAGGTCCATTGT+TGG | + | chr7.4:7847121-7847140 | MS.gene007334:CDS | 50.0% | |
| CCTCTCCTTGATTTCACTGC+AGG | - | chr7.4:7847488-7847507 | None:intergenic | 50.0% | |
| CCTGCAGTGAAATCAAGGAG+AGG | + | chr7.4:7847485-7847504 | MS.gene007334:intron | 50.0% | |
| GAAAGCCGAGGTAGCATCTA+AGG | + | chr7.4:7847540-7847559 | MS.gene007334:CDS | 50.0% | |
| GCAGGACATTGCTCAAGAAG+CGG | + | chr7.4:7847069-7847088 | MS.gene007334:intron | 50.0% | |
| TGTAGCACCAACAATGGACC+TGG | - | chr7.4:7847131-7847150 | None:intergenic | 50.0% | |
| ! | AGTATGGCTTCTTGGTGGCA+CGG | - | chr7.4:7847108-7847127 | None:intergenic | 50.0% |
| ! | GCAGTCCATGTGAGCTTTGA+AGG | - | chr7.4:7846800-7846819 | None:intergenic | 50.0% |
| AAGGGTCCTAAAATGGGCGG+TGG | + | chr7.4:7847607-7847626 | MS.gene007334:CDS | 55.0% | |
| ATCTCGAACCTCGGGCTTCT+CGG | - | chr7.4:7847179-7847198 | None:intergenic | 55.0% | |
| CCACCAAGAAGCCATACTCC+AGG | + | chr7.4:7847110-7847129 | MS.gene007334:CDS | 55.0% | |
| CCCAAGGGTCCTAAAATGGG+CGG | + | chr7.4:7847604-7847623 | MS.gene007334:CDS | 55.0% | |
| CCTAGCAGCATCTCGAACCT+CGG | - | chr7.4:7847188-7847207 | None:intergenic | 55.0% | |
| CCTGGAGTATGGCTTCTTGG+TGG | - | chr7.4:7847113-7847132 | None:intergenic | 55.0% | |
| CGAGGTTCGAGATGCTGCTA+GGG | + | chr7.4:7847186-7847205 | MS.gene007334:CDS | 55.0% | |
| CTAGCAGCATCTCGAACCTC+GGG | - | chr7.4:7847187-7847206 | None:intergenic | 55.0% | |
| CTGCTAGGGAAGCTGCTCTT+CGG | + | chr7.4:7847200-7847219 | MS.gene007334:CDS | 55.0% | |
| GAAAAGAACCGAGAAGCCCG+AGG | + | chr7.4:7847168-7847187 | MS.gene007334:CDS | 55.0% | |
| GGACCTGGAGTATGGCTTCT+TGG | - | chr7.4:7847116-7847135 | None:intergenic | 55.0% | |
| ! | CTAAAATGGGCGGTGGTGGT+GGG | + | chr7.4:7847614-7847633 | MS.gene007334:CDS | 55.0% |
| !! | CAGAAGGGTGCTATGCCCAA+GGG | + | chr7.4:7847589-7847608 | MS.gene007334:CDS | 55.0% |
| !! | TCAGAAGGGTGCTATGCCCA+AGG | + | chr7.4:7847588-7847607 | MS.gene007334:CDS | 55.0% |
| !!! | ACCGCCCATTTTAGGACCCT+TGG | - | chr7.4:7847608-7847627 | None:intergenic | 55.0% |
| !!! | CCGCCCATTTTAGGACCCTT+GGG | - | chr7.4:7847607-7847626 | None:intergenic | 55.0% |
| CCGAGGTTCGAGATGCTGCT+AGG | + | chr7.4:7847185-7847204 | MS.gene007334:CDS | 60.0% | |
| GGTCCTAAAATGGGCGGTGG+TGG | + | chr7.4:7847610-7847629 | MS.gene007334:CDS | 60.0% | |
| ! | CCACCACCACCGCCCATTTT+AGG | - | chr7.4:7847616-7847635 | None:intergenic | 60.0% |
| ! | CCTAAAATGGGCGGTGGTGG+TGG | + | chr7.4:7847613-7847632 | MS.gene007334:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 7845965 | 7847645 | 7845965 | ID=MS.gene007334 |
| chr7.4 | mRNA | 7845965 | 7847645 | 7845965 | ID=MS.gene007334.t1;Parent=MS.gene007334 |
| chr7.4 | exon | 7845965 | 7845975 | 7845965 | ID=MS.gene007334.t1.exon1;Parent=MS.gene007334.t1 |
| chr7.4 | CDS | 7845965 | 7845975 | 7845965 | ID=cds.MS.gene007334.t1;Parent=MS.gene007334.t1 |
| chr7.4 | exon | 7846529 | 7846604 | 7846529 | ID=MS.gene007334.t1.exon2;Parent=MS.gene007334.t1 |
| chr7.4 | CDS | 7846529 | 7846604 | 7846529 | ID=cds.MS.gene007334.t1;Parent=MS.gene007334.t1 |
| chr7.4 | exon | 7846743 | 7846844 | 7846743 | ID=MS.gene007334.t1.exon3;Parent=MS.gene007334.t1 |
| chr7.4 | CDS | 7846743 | 7846844 | 7846743 | ID=cds.MS.gene007334.t1;Parent=MS.gene007334.t1 |
| chr7.4 | exon | 7847073 | 7847221 | 7847073 | ID=MS.gene007334.t1.exon4;Parent=MS.gene007334.t1 |
| chr7.4 | CDS | 7847073 | 7847221 | 7847073 | ID=cds.MS.gene007334.t1;Parent=MS.gene007334.t1 |
| chr7.4 | exon | 7847492 | 7847645 | 7847492 | ID=MS.gene007334.t1.exon5;Parent=MS.gene007334.t1 |
| chr7.4 | CDS | 7847492 | 7847645 | 7847492 | ID=cds.MS.gene007334.t1;Parent=MS.gene007334.t1 |
| Gene Sequence |
| Protein sequence |
