Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007335.t1 | XP_019432874.1 | 66.7 | 213 | 21 | 1 | 1 | 213 | 1 | 163 | 5.30E-56 | 227.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007335.t1 | O65743 | 70.3 | 212 | 14 | 1 | 1 | 212 | 1 | 163 | 1.0e-55 | 218.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007335.t1 | I3SKQ8 | 73.7 | 213 | 6 | 1 | 1 | 213 | 1 | 163 | 6.5e-56 | 226.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene065297 | MS.gene007335 | PPI |
| MS.gene013335 | MS.gene007335 | PPI |
| MS.gene23040 | MS.gene007335 | PPI |
| MS.gene24639 | MS.gene007335 | PPI |
| MS.gene020578 | MS.gene007335 | PPI |
| MS.gene007335 | MS.gene007334 | PPI |
| MS.gene034951 | MS.gene007335 | PPI |
| MS.gene020577 | MS.gene007335 | PPI |
| MS.gene30990 | MS.gene007335 | PPI |
| MS.gene007335 | MS.gene007607 | PPI |
| MS.gene007335 | MS.gene47371 | PPI |
| MS.gene06433 | MS.gene007335 | PPI |
| MS.gene049306 | MS.gene007335 | PPI |
| MS.gene07704 | MS.gene007335 | PPI |
| MS.gene007610 | MS.gene007335 | PPI |
| MS.gene007336 | MS.gene007335 | PPI |
| MS.gene007607 | MS.gene007335 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007335.t1 | MTR_7g103320 | 76.526 | 213 | 0 | 1 | 1 | 213 | 1 | 163 | 6.45e-107 | 304 |
| MS.gene007335.t1 | MTR_7g103320 | 76.526 | 213 | 0 | 1 | 1 | 213 | 1 | 163 | 6.45e-107 | 304 |
| MS.gene007335.t1 | MTR_7g103320 | 76.526 | 213 | 0 | 1 | 1 | 213 | 1 | 163 | 6.45e-107 | 304 |
| MS.gene007335.t1 | MTR_1g061670 | 71.963 | 214 | 8 | 3 | 1 | 213 | 1 | 163 | 1.32e-96 | 278 |
| MS.gene007335.t1 | MTR_4g104930 | 79.630 | 54 | 10 | 1 | 43 | 96 | 13 | 65 | 2.08e-22 | 86.7 |
| MS.gene007335.t1 | MTR_4g055270 | 36.842 | 95 | 58 | 1 | 3 | 95 | 1 | 95 | 3.12e-17 | 75.9 |
| MS.gene007335.t1 | MTR_2g084925 | 34.409 | 93 | 59 | 1 | 3 | 93 | 1 | 93 | 1.71e-13 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007335.t1 | AT2G36620 | 67.633 | 207 | 16 | 2 | 1 | 206 | 1 | 157 | 2.61e-77 | 229 |
| MS.gene007335.t1 | AT3G53020 | 94.690 | 113 | 6 | 0 | 1 | 113 | 1 | 113 | 8.59e-75 | 223 |
| MS.gene007335.t1 | AT2G44860 | 38.144 | 97 | 54 | 2 | 3 | 95 | 1 | 95 | 9.49e-17 | 74.7 |
| MS.gene007335.t1 | AT2G44860 | 38.144 | 97 | 54 | 2 | 3 | 95 | 1 | 95 | 9.49e-17 | 74.7 |
Find 54 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATGCTACTTCGGCTTTCT+TGG | 0.236901 | 7.4:-7843552 | None:intergenic |
| CCTAAAATGGGCGGTGGTGG+TGG | 0.259183 | 7.4:+7843629 | MS.gene007335:CDS |
| TATGCCCAAGGGTCCTAAAA+TGG | 0.286938 | 7.4:+7843616 | MS.gene007335:CDS |
| CTTGGCTTTCTTCTCATCCT+TGG | 0.290844 | 7.4:-7843534 | None:intergenic |
| ATCTCGAACCTCGGGCTTCT+CGG | 0.307520 | 7.4:-7843262 | None:intergenic |
| AAAGAGTCGGCATAATAAAA+AGG | 0.317953 | 7.4:-7843316 | None:intergenic |
| CTTGTGCTGCTTTCTGTACA+TGG | 0.329814 | 7.4:-7842905 | None:intergenic |
| GGACCTGGAGTATGGCTTCT+TGG | 0.357806 | 7.4:-7843199 | None:intergenic |
| GAAAGCCGAAGTAGCATCTA+AGG | 0.360444 | 7.4:+7843556 | MS.gene007335:CDS |
| ATAAATCTGATCCCTCTTCC+TGG | 0.395884 | 7.4:-7842652 | None:intergenic |
| GCAGTCCATGTAAGCTTTGA+AGG | 0.396337 | 7.4:-7842883 | None:intergenic |
| GCATCTAAGGCACAAAAGTC+AGG | 0.405098 | 7.4:+7843569 | MS.gene007335:CDS |
| CCAACAATGGACCTGGAGTA+TGG | 0.414209 | 7.4:-7843207 | None:intergenic |
| ATTTATTCGTAGTGATTCTC+AGG | 0.428494 | 7.4:+7842669 | MS.gene007335:CDS |
| CCTAGCAGCATCTCGAACCT+CGG | 0.438375 | 7.4:-7843271 | None:intergenic |
| GGTCCTAAAATGGGCGGTGG+TGG | 0.445895 | 7.4:+7843626 | MS.gene007335:CDS |
| CCTCTCCTTGATTTCACTGC+GGG | 0.447097 | 7.4:-7843501 | None:intergenic |
| TTGTGAACTCAAAATGTAAG+AGG | 0.457107 | 7.4:+7842839 | MS.gene007335:CDS |
| TTGAAGGCTTCAACTTGTTG+TGG | 0.467148 | 7.4:-7842867 | None:intergenic |
| TGAAGCCTTCAAAGCTTACA+TGG | 0.470130 | 7.4:+7842878 | MS.gene007335:CDS |
| GCAAAGATTTACCCAGGAAG+AGG | 0.473275 | 7.4:+7842640 | MS.gene007335:CDS |
| ATGCCCAAGGGTCCTAAAAT+GGG | 0.479062 | 7.4:+7843617 | MS.gene007335:CDS |
| ATTTCACTGCGGGATTGACT+CGG | 0.488588 | 7.4:-7843491 | None:intergenic |
| CTGCTAGGGAAGCTGCTCTT+CGG | 0.488937 | 7.4:+7843286 | MS.gene007335:CDS |
| CCATACTCCAGGTCCATTGT+TGG | 0.499932 | 7.4:+7843207 | MS.gene007335:CDS |
| TCAATCCCGCAGTGAAATCA+AGG | 0.506619 | 7.4:+7843496 | MS.gene007335:CDS |
| CTAGCAGCATCTCGAACCTC+GGG | 0.515819 | 7.4:-7843270 | None:intergenic |
| CTAAAATGGGCGGTGGTGGT+GGG | 0.525722 | 7.4:+7843630 | MS.gene007335:CDS |
| CTCAAGAAGCTGTGAAGAAG+AGG | 0.530274 | 7.4:+7843166 | MS.gene007335:CDS |
| CCGAGGTTCGAGATGCTGCT+AGG | 0.531808 | 7.4:+7843271 | MS.gene007335:CDS |
| CGAGGTTCGAGATGCTGCTA+GGG | 0.538000 | 7.4:+7843272 | MS.gene007335:CDS |
| TTGTGCCTTAGATGCTACTT+CGG | 0.538791 | 7.4:-7843561 | None:intergenic |
| AGGGAAAGGCAATGTTCAGA+AGG | 0.551183 | 7.4:+7843589 | MS.gene007335:CDS |
| CCTGGAGTATGGCTTCTTGG+TGG | 0.554085 | 7.4:-7843196 | None:intergenic |
| TAAATCTGATCCCTCTTCCT+GGG | 0.554260 | 7.4:-7842651 | None:intergenic |
| TTCAAGTGTAGCACCAACAA+TGG | 0.581573 | 7.4:-7843220 | None:intergenic |
| AAGGGTCCTAAAATGGGCGG+TGG | 0.584819 | 7.4:+7843623 | MS.gene007335:CDS |
| TCAGAAGGGTGCTATGCCCA+AGG | 0.589737 | 7.4:+7843604 | MS.gene007335:CDS |
| CAAAGATTTACCCAGGAAGA+GGG | 0.595056 | 7.4:+7842641 | MS.gene007335:CDS |
| ACTGAACTCTGTCGATTCAG+TGG | 0.599671 | 7.4:+7842616 | MS.gene007335:CDS |
| CCACCAAGAAGCCATACTCC+AGG | 0.600767 | 7.4:+7843196 | MS.gene007335:CDS |
| AAGGCACAAAAGTCAGGGAA+AGG | 0.600921 | 7.4:+7843575 | MS.gene007335:CDS |
| CAGAAGGGTGCTATGCCCAA+GGG | 0.602938 | 7.4:+7843605 | MS.gene007335:CDS |
| AGTATGGCTTCTTGGTGGCA+CGG | 0.604625 | 7.4:-7843191 | None:intergenic |
| CATCTAAGGCACAAAAGTCA+GGG | 0.612277 | 7.4:+7843570 | MS.gene007335:CDS |
| TGTAGCACCAACAATGGACC+TGG | 0.616016 | 7.4:-7843214 | None:intergenic |
| TCCTCTCCTTGATTTCACTG+CGG | 0.628837 | 7.4:-7843502 | None:intergenic |
| GAAAAGAACCGAGAAGCCCG+AGG | 0.642434 | 7.4:+7843254 | MS.gene007335:CDS |
| AGTGGCGCAAAGATTTACCC+AGG | 0.643624 | 7.4:+7842634 | MS.gene007335:CDS |
| GTACAGAAAGCAGCACAAGA+AGG | 0.650232 | 7.4:+7842909 | MS.gene007335:CDS |
| CCCAAGGGTCCTAAAATGGG+CGG | 0.653433 | 7.4:+7843620 | MS.gene007335:CDS |
| GGGAAAGGCAATGTTCAGAA+GGG | 0.656870 | 7.4:+7843590 | MS.gene007335:CDS |
| CCCGCAGTGAAATCAAGGAG+AGG | 0.678239 | 7.4:+7843501 | MS.gene007335:CDS |
| GGAGAGGATAAAGAAAACCA+AGG | 0.682479 | 7.4:+7843517 | MS.gene007335:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCTTAGTTTTATTGATATA+AGG | + | chr7.4:7842781-7842800 | MS.gene007335:intron | 15.0% |
| !!! | GTTTTTTTTATTGTTTTTAC+AGG | + | chr7.4:7842807-7842826 | MS.gene007335:intron | 15.0% |
| !! | TTAAAAATTGAAATTGCACA+AGG | - | chr7.4:7842442-7842461 | None:intergenic | 20.0% |
| !! | TTTGATGGAATGTAAAATTT+CGG | + | chr7.4:7842191-7842210 | MS.gene007335:intron | 20.0% |
| !!! | AGATTTAGTTTTATTGTACT+TGG | + | chr7.4:7842165-7842184 | MS.gene007335:intron | 20.0% |
| !!! | CAAAATTCTAAAAATCTGTT+TGG | + | chr7.4:7842262-7842281 | MS.gene007335:intron | 20.0% |
| !!! | CAATTTCAATTTTTAATGAG+TGG | + | chr7.4:7842446-7842465 | MS.gene007335:intron | 20.0% |
| !!! | GATTTAGTTTTATTGTACTT+GGG | + | chr7.4:7842166-7842185 | MS.gene007335:intron | 20.0% |
| !!! | TGGAAATTTAGATTTGTTTT+TGG | + | chr7.4:7842407-7842426 | MS.gene007335:intron | 20.0% |
| !!! | TGTATTTTGATTGAATTAGT+GGG | + | chr7.4:7842529-7842548 | MS.gene007335:intron | 20.0% |
| !!! | TTGTATTTTGATTGAATTAG+TGG | + | chr7.4:7842528-7842547 | MS.gene007335:intron | 20.0% |
| ! | AAAACTGAATGTGTAAATGA+TGG | - | chr7.4:7842085-7842104 | None:intergenic | 25.0% |
| ! | AAATCAACCAAAGCTATAAT+GGG | - | chr7.4:7842354-7842373 | None:intergenic | 25.0% |
| ! | AGTAGTAAAATTACTAGACA+AGG | - | chr7.4:7843097-7843116 | None:intergenic | 25.0% |
| ! | ATAATCATAGAACACTGTTT+CGG | - | chr7.4:7842227-7842246 | None:intergenic | 25.0% |
| ! | CAAAATACAATAACAGTGAA+TGG | - | chr7.4:7842518-7842537 | None:intergenic | 25.0% |
| ! | GATTCATCAACTAAACATTA+CGG | - | chr7.4:7842144-7842163 | None:intergenic | 25.0% |
| ! | TAAATCAACCAAAGCTATAA+TGG | - | chr7.4:7842355-7842374 | None:intergenic | 25.0% |
| !! | CATTTACACATTCAGTTTTA+GGG | + | chr7.4:7842086-7842105 | MS.gene007335:intron | 25.0% |
| !! | TCATTTACACATTCAGTTTT+AGG | + | chr7.4:7842085-7842104 | MS.gene007335:intron | 25.0% |
| !! | TTTGCAATTTTTGATGCTAT+TGG | + | chr7.4:7842387-7842406 | MS.gene007335:intron | 25.0% |
| !!! | AAGCTTAATTTAGCTTTACA+CGG | - | chr7.4:7842984-7843003 | None:intergenic | 25.0% |
| AAAGAGTCGGCATAATAAAA+AGG | - | chr7.4:7843319-7843338 | None:intergenic | 30.0% | |
| ATTTATTCGTAGTGATTCTC+AGG | + | chr7.4:7842669-7842688 | MS.gene007335:CDS | 30.0% | |
| CAGTGTTCTATGATTATTGT+AGG | + | chr7.4:7842230-7842249 | MS.gene007335:intron | 30.0% | |
| GAGATAAAAATGACTCATGT+TGG | + | chr7.4:7842693-7842712 | MS.gene007335:intron | 30.0% | |
| TATTGTACTTGGGAATTTGA+TGG | + | chr7.4:7842176-7842195 | MS.gene007335:intron | 30.0% | |
| TTGTGAACTCAAAATGTAAG+AGG | + | chr7.4:7842839-7842858 | MS.gene007335:CDS | 30.0% | |
| ! | TACTAACTTTTCCACACAAA+GGG | - | chr7.4:7842576-7842595 | None:intergenic | 30.0% |
| ! | TTACTAACTTTTCCACACAA+AGG | - | chr7.4:7842577-7842596 | None:intergenic | 30.0% |
| !!! | AAATGACTCATGTTGGTTTT+TGG | + | chr7.4:7842700-7842719 | MS.gene007335:intron | 30.0% |
| !!! | TACATTTTGAGTTCACAAAG+AGG | - | chr7.4:7842837-7842856 | None:intergenic | 30.0% |
| AAAAAGAGGTCTCAAAGAGT+CGG | - | chr7.4:7843332-7843351 | None:intergenic | 35.0% | |
| AATGTAACTAGGTTCATGGA+TGG | - | chr7.4:7843030-7843049 | None:intergenic | 35.0% | |
| ATATTATGCATCTGTTGTGC+AGG | + | chr7.4:7843137-7843156 | MS.gene007335:intron | 35.0% | |
| CAACAATGTAACTAGGTTCA+TGG | - | chr7.4:7843034-7843053 | None:intergenic | 35.0% | |
| CAAGGCTATCTCATAGAATT+AGG | - | chr7.4:7843079-7843098 | None:intergenic | 35.0% | |
| GTAACCACAACAATGTAACT+AGG | - | chr7.4:7843041-7843060 | None:intergenic | 35.0% | |
| TCAAGTACCCATTATAGCTT+TGG | + | chr7.4:7842344-7842363 | MS.gene007335:intron | 35.0% | |
| TGAACCTAGTTACATTGTTG+TGG | + | chr7.4:7843034-7843053 | MS.gene007335:intron | 35.0% | |
| AATTTATTGCGCCCTTTGTG+TGG | + | chr7.4:7842562-7842581 | MS.gene007335:intron | 40.0% | |
| ATAAATCTGATCCCTCTTCC+TGG | - | chr7.4:7842655-7842674 | None:intergenic | 40.0% | |
| CAAAGATTTACCCAGGAAGA+GGG | + | chr7.4:7842641-7842660 | MS.gene007335:CDS | 40.0% | |
| GGAGAGGATAAAGAAAACCA+AGG | + | chr7.4:7843517-7843536 | MS.gene007335:CDS | 40.0% | |
| TAAATCTGATCCCTCTTCCT+GGG | - | chr7.4:7842654-7842673 | None:intergenic | 40.0% | |
| TGAAGCCTTCAAAGCTTACA+TGG | + | chr7.4:7842878-7842897 | MS.gene007335:CDS | 40.0% | |
| TTCAAGTGTAGCACCAACAA+TGG | - | chr7.4:7843223-7843242 | None:intergenic | 40.0% | |
| ! | CATCTAAGGCACAAAAGTCA+GGG | + | chr7.4:7843570-7843589 | MS.gene007335:CDS | 40.0% |
| ! | TTGTGCCTTAGATGCTACTT+CGG | - | chr7.4:7843564-7843583 | None:intergenic | 40.0% |
| !! | GACAGAGTTCAGTTCTGAAA+TGG | - | chr7.4:7842609-7842628 | None:intergenic | 40.0% |
| !! | TTGAAGGCTTCAACTTGTTG+TGG | - | chr7.4:7842870-7842889 | None:intergenic | 40.0% |
| AAGGCACAAAAGTCAGGGAA+AGG | + | chr7.4:7843575-7843594 | MS.gene007335:CDS | 45.0% | |
| AGGGAAAGGCAATGTTCAGA+AGG | + | chr7.4:7843589-7843608 | MS.gene007335:CDS | 45.0% | |
| ATGCCCAAGGGTCCTAAAAT+GGG | + | chr7.4:7843617-7843636 | MS.gene007335:CDS | 45.0% | |
| ATTTCACTGCGGGATTGACT+CGG | - | chr7.4:7843494-7843513 | None:intergenic | 45.0% | |
| CTCAAGAAGCTGTGAAGAAG+AGG | + | chr7.4:7843166-7843185 | MS.gene007335:CDS | 45.0% | |
| GAAAGCCGAAGTAGCATCTA+AGG | + | chr7.4:7843556-7843575 | MS.gene007335:CDS | 45.0% | |
| GCAAAGATTTACCCAGGAAG+AGG | + | chr7.4:7842640-7842659 | MS.gene007335:CDS | 45.0% | |
| GGGAAAGGCAATGTTCAGAA+GGG | + | chr7.4:7843590-7843609 | MS.gene007335:CDS | 45.0% | |
| GTACAGAAAGCAGCACAAGA+AGG | + | chr7.4:7842909-7842928 | MS.gene007335:CDS | 45.0% | |
| TATGCCCAAGGGTCCTAAAA+TGG | + | chr7.4:7843616-7843635 | MS.gene007335:CDS | 45.0% | |
| TCAATCCCGCAGTGAAATCA+AGG | + | chr7.4:7843496-7843515 | MS.gene007335:CDS | 45.0% | |
| TCCTCTCCTTGATTTCACTG+CGG | - | chr7.4:7843505-7843524 | None:intergenic | 45.0% | |
| ! | AGATGCTACTTCGGCTTTCT+TGG | - | chr7.4:7843555-7843574 | None:intergenic | 45.0% |
| ! | CTTGGCTTTCTTCTCATCCT+TGG | - | chr7.4:7843537-7843556 | None:intergenic | 45.0% |
| ! | GCAGTCCATGTAAGCTTTGA+AGG | - | chr7.4:7842886-7842905 | None:intergenic | 45.0% |
| ! | GCATCTAAGGCACAAAAGTC+AGG | + | chr7.4:7843569-7843588 | MS.gene007335:CDS | 45.0% |
| !! | ACTGAACTCTGTCGATTCAG+TGG | + | chr7.4:7842616-7842635 | MS.gene007335:CDS | 45.0% |
| !! | CTTGTGCTGCTTTCTGTACA+TGG | - | chr7.4:7842908-7842927 | None:intergenic | 45.0% |
| !! | AAAAAAAAAAAAAAAAAAAG+AGG | - | chr7.4:7843346-7843365 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTCA+TGG | + | chr7.4:7843348-7843367 | MS.gene007335:CDS | 5.0% |
| AGTGGCGCAAAGATTTACCC+AGG | + | chr7.4:7842634-7842653 | MS.gene007335:CDS | 50.0% | |
| CCAACAATGGACCTGGAGTA+TGG | - | chr7.4:7843210-7843229 | None:intergenic | 50.0% | |
| CCATACTCCAGGTCCATTGT+TGG | + | chr7.4:7843207-7843226 | MS.gene007335:CDS | 50.0% | |
| CCTCTCCTTGATTTCACTGC+GGG | - | chr7.4:7843504-7843523 | None:intergenic | 50.0% | |
| TGTAGCACCAACAATGGACC+TGG | - | chr7.4:7843217-7843236 | None:intergenic | 50.0% | |
| ! | AGTATGGCTTCTTGGTGGCA+CGG | - | chr7.4:7843194-7843213 | None:intergenic | 50.0% |
| AAGGGTCCTAAAATGGGCGG+TGG | + | chr7.4:7843623-7843642 | MS.gene007335:CDS | 55.0% | |
| ATCTCGAACCTCGGGCTTCT+CGG | - | chr7.4:7843265-7843284 | None:intergenic | 55.0% | |
| CCACCAAGAAGCCATACTCC+AGG | + | chr7.4:7843196-7843215 | MS.gene007335:CDS | 55.0% | |
| CCCAAGGGTCCTAAAATGGG+CGG | + | chr7.4:7843620-7843639 | MS.gene007335:CDS | 55.0% | |
| CCCGCAGTGAAATCAAGGAG+AGG | + | chr7.4:7843501-7843520 | MS.gene007335:CDS | 55.0% | |
| CCTAGCAGCATCTCGAACCT+CGG | - | chr7.4:7843274-7843293 | None:intergenic | 55.0% | |
| CCTGGAGTATGGCTTCTTGG+TGG | - | chr7.4:7843199-7843218 | None:intergenic | 55.0% | |
| CGAGGTTCGAGATGCTGCTA+GGG | + | chr7.4:7843272-7843291 | MS.gene007335:CDS | 55.0% | |
| CTAGCAGCATCTCGAACCTC+GGG | - | chr7.4:7843273-7843292 | None:intergenic | 55.0% | |
| CTGCTAGGGAAGCTGCTCTT+CGG | + | chr7.4:7843286-7843305 | MS.gene007335:CDS | 55.0% | |
| GAAAAGAACCGAGAAGCCCG+AGG | + | chr7.4:7843254-7843273 | MS.gene007335:CDS | 55.0% | |
| GGACCTGGAGTATGGCTTCT+TGG | - | chr7.4:7843202-7843221 | None:intergenic | 55.0% | |
| ! | CTAAAATGGGCGGTGGTGGT+GGG | + | chr7.4:7843630-7843649 | MS.gene007335:CDS | 55.0% |
| !! | CAGAAGGGTGCTATGCCCAA+GGG | + | chr7.4:7843605-7843624 | MS.gene007335:CDS | 55.0% |
| !! | TCAGAAGGGTGCTATGCCCA+AGG | + | chr7.4:7843604-7843623 | MS.gene007335:CDS | 55.0% |
| !!! | ACCGCCCATTTTAGGACCCT+TGG | - | chr7.4:7843624-7843643 | None:intergenic | 55.0% |
| !!! | CCGCCCATTTTAGGACCCTT+GGG | - | chr7.4:7843623-7843642 | None:intergenic | 55.0% |
| CCGAGGTTCGAGATGCTGCT+AGG | + | chr7.4:7843271-7843290 | MS.gene007335:CDS | 60.0% | |
| GGTCCTAAAATGGGCGGTGG+TGG | + | chr7.4:7843626-7843645 | MS.gene007335:CDS | 60.0% | |
| ! | CCACCACCACCGCCCATTTT+AGG | - | chr7.4:7843632-7843651 | None:intergenic | 60.0% |
| ! | CCTAAAATGGGCGGTGGTGG+TGG | + | chr7.4:7843629-7843648 | MS.gene007335:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 7842046 | 7843661 | 7842046 | ID=MS.gene007335 |
| chr7.4 | mRNA | 7842046 | 7843661 | 7842046 | ID=MS.gene007335.t1;Parent=MS.gene007335 |
| chr7.4 | exon | 7842046 | 7842056 | 7842046 | ID=MS.gene007335.t1.exon1;Parent=MS.gene007335.t1 |
| chr7.4 | CDS | 7842046 | 7842056 | 7842046 | ID=cds.MS.gene007335.t1;Parent=MS.gene007335.t1 |
| chr7.4 | exon | 7842615 | 7842690 | 7842615 | ID=MS.gene007335.t1.exon2;Parent=MS.gene007335.t1 |
| chr7.4 | CDS | 7842615 | 7842690 | 7842615 | ID=cds.MS.gene007335.t1;Parent=MS.gene007335.t1 |
| chr7.4 | exon | 7842829 | 7842930 | 7842829 | ID=MS.gene007335.t1.exon3;Parent=MS.gene007335.t1 |
| chr7.4 | CDS | 7842829 | 7842930 | 7842829 | ID=cds.MS.gene007335.t1;Parent=MS.gene007335.t1 |
| chr7.4 | exon | 7843159 | 7843389 | 7843159 | ID=MS.gene007335.t1.exon4;Parent=MS.gene007335.t1 |
| chr7.4 | CDS | 7843159 | 7843389 | 7843159 | ID=cds.MS.gene007335.t1;Parent=MS.gene007335.t1 |
| chr7.4 | exon | 7843440 | 7843661 | 7843440 | ID=MS.gene007335.t1.exon5;Parent=MS.gene007335.t1 |
| chr7.4 | CDS | 7843440 | 7843661 | 7843440 | ID=cds.MS.gene007335.t1;Parent=MS.gene007335.t1 |
| Gene Sequence |
| Protein sequence |
