Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007336.t1 | XP_013450065.1 | 99.4 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 2.20E-62 | 248.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007336.t1 | O65743 | 94.5 | 163 | 8 | 1 | 1 | 162 | 1 | 163 | 8.0e-61 | 234.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007336.t1 | I3SKQ8 | 99.4 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.6e-62 | 248.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene007336 | MS.gene034951 | PPI |
| MS.gene007336 | MS.gene007334 | PPI |
| MS.gene034951 | MS.gene007336 | PPI |
| MS.gene007336 | MS.gene065297 | PPI |
| MS.gene007336 | MS.gene007607 | PPI |
| MS.gene007336 | MS.gene47371 | PPI |
| MS.gene007336 | MS.gene007610 | PPI |
| MS.gene007336 | MS.gene24639 | PPI |
| MS.gene007336 | MS.gene020577 | PPI |
| MS.gene007336 | MS.gene30990 | PPI |
| MS.gene007336 | MS.gene23040 | PPI |
| MS.gene049306 | MS.gene007336 | PPI |
| MS.gene007336 | MS.gene06433 | PPI |
| MS.gene007336 | MS.gene020578 | PPI |
| MS.gene007336 | MS.gene07704 | PPI |
| MS.gene007336 | MS.gene007335 | PPI |
| MS.gene007336 | MS.gene013335 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007336.t1 | MTR_7g103320 | 99.387 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.54e-116 | 327 |
| MS.gene007336.t1 | MTR_7g103320 | 99.387 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.54e-116 | 327 |
| MS.gene007336.t1 | MTR_7g103320 | 99.387 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.54e-116 | 327 |
| MS.gene007336.t1 | MTR_1g061670 | 94.667 | 150 | 7 | 1 | 1 | 149 | 1 | 150 | 2.40e-89 | 258 |
| MS.gene007336.t1 | MTR_4g104930 | 79.630 | 54 | 10 | 1 | 43 | 96 | 13 | 65 | 2.16e-23 | 87.8 |
| MS.gene007336.t1 | MTR_4g055270 | 37.895 | 95 | 57 | 1 | 3 | 95 | 1 | 95 | 1.05e-18 | 78.6 |
| MS.gene007336.t1 | MTR_2g084925 | 35.484 | 93 | 58 | 1 | 3 | 93 | 1 | 93 | 3.11e-15 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007336.t1 | AT2G36620 | 89.172 | 157 | 16 | 1 | 1 | 156 | 1 | 157 | 1.36e-88 | 256 |
| MS.gene007336.t1 | AT3G53020 | 89.933 | 149 | 14 | 1 | 1 | 149 | 1 | 148 | 7.35e-84 | 244 |
| MS.gene007336.t1 | AT2G44860 | 37.500 | 128 | 67 | 5 | 3 | 126 | 1 | 119 | 3.26e-18 | 77.0 |
| MS.gene007336.t1 | AT2G44860 | 37.500 | 128 | 67 | 5 | 3 | 126 | 1 | 119 | 3.26e-18 | 77.0 |
Find 53 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATGCTACCTCGGCTTTCT+TGG | 0.251083 | 7.4:-7834584 | None:intergenic |
| CCTAAAATGGGCGGTGGTGG+TGG | 0.259183 | 7.4:+7834661 | MS.gene007336:CDS |
| TATGCCCAAGGGTCCTAAAA+TGG | 0.286938 | 7.4:+7834648 | MS.gene007336:CDS |
| ATCTCGAACCTCGGGCTTCT+CGG | 0.307520 | 7.4:-7834224 | None:intergenic |
| CTTGTGCTGCTTTCTGTACA+TGG | 0.329814 | 7.4:-7833867 | None:intergenic |
| GGACCTGGAGTATGGCTTCT+TGG | 0.357806 | 7.4:-7834161 | None:intergenic |
| GCAGTCCATGTGAGCTTTGA+AGG | 0.357906 | 7.4:-7833845 | None:intergenic |
| GAAAGCCGAGGTAGCATCTA+AGG | 0.361381 | 7.4:+7834588 | MS.gene007336:CDS |
| CTCAAGAAGCGGTGAAGAAA+AGG | 0.395866 | 7.4:+7834128 | MS.gene007336:CDS |
| ATAAATCTGATCCCTCTTCC+TGG | 0.395884 | 7.4:-7833614 | None:intergenic |
| GCATCTAAGGCACAAAAGTC+AGG | 0.405098 | 7.4:+7834601 | MS.gene007336:CDS |
| CCAACAATGGACCTGGAGTA+TGG | 0.414209 | 7.4:-7834169 | None:intergenic |
| ATTTATTCGTAGTGATTCTC+AGG | 0.428494 | 7.4:+7833631 | MS.gene007336:CDS |
| CCTAGCAGCATCTCGAACCT+CGG | 0.438375 | 7.4:-7834233 | None:intergenic |
| GGTCCTAAAATGGGCGGTGG+TGG | 0.445895 | 7.4:+7834658 | MS.gene007336:CDS |
| TTGTGAACTCAAAATGTAAG+AGG | 0.457107 | 7.4:+7833801 | MS.gene007336:CDS |
| TCAAAGATTTACCCAGGAAG+AGG | 0.465260 | 7.4:+7833602 | MS.gene007336:CDS |
| TTGAAGGCTTCAACTTGTTG+TGG | 0.467148 | 7.4:-7833829 | None:intergenic |
| ATGCCCAAGGGTCCTAAAAT+GGG | 0.479062 | 7.4:+7834649 | MS.gene007336:CDS |
| CTGCTAGGGAAGCTGCTCTT+CGG | 0.488937 | 7.4:+7834248 | MS.gene007336:CDS |
| CCATACTCCAGGTCCATTGT+TGG | 0.499932 | 7.4:+7834169 | MS.gene007336:CDS |
| TCAATCCTGCAGTGAAATCA+AGG | 0.504323 | 7.4:+7834528 | MS.gene007336:intron |
| CTAGCAGCATCTCGAACCTC+GGG | 0.515819 | 7.4:-7834232 | None:intergenic |
| CTAAAATGGGCGGTGGTGGT+GGG | 0.525722 | 7.4:+7834662 | MS.gene007336:CDS |
| CCGAGGTTCGAGATGCTGCT+AGG | 0.531808 | 7.4:+7834233 | MS.gene007336:CDS |
| CGAGGTTCGAGATGCTGCTA+GGG | 0.538000 | 7.4:+7834234 | MS.gene007336:CDS |
| CCTGGAGTATGGCTTCTTGG+TGG | 0.554085 | 7.4:-7834158 | None:intergenic |
| TAAATCTGATCCCTCTTCCT+GGG | 0.554260 | 7.4:-7833613 | None:intergenic |
| TGAAGCCTTCAAAGCTCACA+TGG | 0.563280 | 7.4:+7833840 | MS.gene007336:CDS |
| TTGTGCCTTAGATGCTACCT+CGG | 0.575585 | 7.4:-7834593 | None:intergenic |
| AGGGAAGGGAAATGTTCAGA+AGG | 0.577296 | 7.4:+7834621 | MS.gene007336:CDS |
| TTCAAGTGTAGCACCAACAA+TGG | 0.581573 | 7.4:-7834182 | None:intergenic |
| AAGGGTCCTAAAATGGGCGG+TGG | 0.584819 | 7.4:+7834655 | MS.gene007336:CDS |
| TCAGAAGGGTGCTATGCCCA+AGG | 0.589737 | 7.4:+7834636 | MS.gene007336:CDS |
| TAAGGCACAAAAGTCAGGGA+AGG | 0.594983 | 7.4:+7834606 | MS.gene007336:CDS |
| CAAAGATTTACCCAGGAAGA+GGG | 0.595056 | 7.4:+7833603 | MS.gene007336:CDS |
| ACTGAACTCTGTCGATTCAG+TGG | 0.599671 | 7.4:+7833578 | MS.gene007336:CDS |
| CCACCAAGAAGCCATACTCC+AGG | 0.600767 | 7.4:+7834158 | MS.gene007336:CDS |
| CAGAAGGGTGCTATGCCCAA+GGG | 0.602938 | 7.4:+7834637 | MS.gene007336:CDS |
| TAAAACTTACTTTAGAACCA+TGG | 0.603222 | 7.4:-7833012 | None:intergenic |
| AGTATGGCTTCTTGGTGGCA+CGG | 0.604625 | 7.4:-7834153 | None:intergenic |
| CATCTAAGGCACAAAAGTCA+GGG | 0.612277 | 7.4:+7834602 | MS.gene007336:CDS |
| TGTAGCACCAACAATGGACC+TGG | 0.616016 | 7.4:-7834176 | None:intergenic |
| AAGGCACAAAAGTCAGGGAA+GGG | 0.622311 | 7.4:+7834607 | MS.gene007336:CDS |
| AGTGGCTCAAAGATTTACCC+AGG | 0.630927 | 7.4:+7833596 | MS.gene007336:CDS |
| GAAAAGAACCGAGAAGCCCG+AGG | 0.642434 | 7.4:+7834216 | MS.gene007336:CDS |
| GCAGGACATTGCTCAAGAAG+CGG | 0.647206 | 7.4:+7834117 | MS.gene007336:intron |
| GTACAGAAAGCAGCACAAGA+AGG | 0.650232 | 7.4:+7833871 | MS.gene007336:CDS |
| CCCAAGGGTCCTAAAATGGG+CGG | 0.653433 | 7.4:+7834652 | MS.gene007336:CDS |
| GGGAAGGGAAATGTTCAGAA+GGG | 0.653491 | 7.4:+7834622 | MS.gene007336:CDS |
| AAAGAAAGCCAAGAAAGCCG+AGG | 0.666450 | 7.4:+7834576 | MS.gene007336:CDS |
| GGAGAGGATAAAGAAAACCA+AGG | 0.682479 | 7.4:+7834549 | MS.gene007336:CDS |
| CCTGCAGTGAAATCAAGGAG+AGG | 0.683831 | 7.4:+7834533 | MS.gene007336:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCTTTTTTCTTTTTTT+CGG | + | chr7.4:7834317-7834336 | MS.gene007336:intron | 10.0% |
| !! | AAAGAAAAAAAAAAAAAGAG+AGG | - | chr7.4:7834306-7834325 | None:intergenic | 15.0% |
| !! | CTAAAAATTGAAATTACAAT+AGG | - | chr7.4:7833348-7833367 | None:intergenic | 15.0% |
| !!! | ATCTTAGTTTTATTGATATA+AGG | + | chr7.4:7833743-7833762 | MS.gene007336:intron | 15.0% |
| !!! | GTTTTTTTTATTGTTTTTAC+AGG | + | chr7.4:7833769-7833788 | MS.gene007336:intron | 15.0% |
| !!! | TTAATGTCTAAAAATTTGTT+TGG | + | chr7.4:7833165-7833184 | MS.gene007336:intron | 15.0% |
| !! | AAAATTGAATGTGTAAATGA+TGG | - | chr7.4:7833053-7833072 | None:intergenic | 20.0% |
| !! | AAATCAACCAAAAATATGAT+GGG | - | chr7.4:7833263-7833282 | None:intergenic | 20.0% |
| !! | TAAATCAACCAAAAATATGA+TGG | - | chr7.4:7833264-7833283 | None:intergenic | 20.0% |
| !!! | CATTTACACATTCAATTTTA+GGG | + | chr7.4:7833054-7833073 | MS.gene007336:intron | 20.0% |
| !!! | TAATTTCAATTTTTAGTGAG+TGG | + | chr7.4:7833352-7833371 | MS.gene007336:intron | 20.0% |
| !!! | TCATTTACACATTCAATTTT+AGG | + | chr7.4:7833053-7833072 | MS.gene007336:intron | 20.0% |
| !!! | TTGAAAATTAGACATGTTTT+TGG | + | chr7.4:7833314-7833333 | MS.gene007336:intron | 20.0% |
| ! | AAAACAGTGATGAAATTACA+TGG | - | chr7.4:7834437-7834456 | None:intergenic | 25.0% |
| ! | ACAGTAAGTAGTAAAATTAC+TGG | - | chr7.4:7834065-7834084 | None:intergenic | 25.0% |
| ! | CATATCTAATGTACTTCTAA+TGG | - | chr7.4:7833413-7833432 | None:intergenic | 25.0% |
| ! | GAGATAAAAATGATTCATGT+TGG | + | chr7.4:7833655-7833674 | MS.gene007336:intron | 25.0% |
| !! | AAATGATTCATGTTGGATTT+TGG | + | chr7.4:7833662-7833681 | MS.gene007336:intron | 25.0% |
| !! | ATTACTAACTTTTCCAAACA+AGG | - | chr7.4:7833540-7833559 | None:intergenic | 25.0% |
| !! | TTACTAACTTTTCCAAACAA+GGG | - | chr7.4:7833539-7833558 | None:intergenic | 25.0% |
| !! | TTCATTGAGAACTCTTTTTA+TGG | + | chr7.4:7834373-7834392 | MS.gene007336:intron | 25.0% |
| !!! | GTAATTTCATCACTGTTTTT+TGG | + | chr7.4:7834438-7834457 | MS.gene007336:intron | 25.0% |
| !!! | TGTGTAACTTTTAAGAATGT+TGG | + | chr7.4:7833434-7833453 | MS.gene007336:intron | 25.0% |
| AATTGTGTAACAGGAAAAAC+AGG | - | chr7.4:7834482-7834501 | None:intergenic | 30.0% | |
| AGTAGTAAAATTACTGGACA+AGG | - | chr7.4:7834059-7834078 | None:intergenic | 30.0% | |
| ATTTATTCGTAGTGATTCTC+AGG | + | chr7.4:7833631-7833650 | MS.gene007336:CDS | 30.0% | |
| CAAAATGCAATAACAGTGAA+TGG | - | chr7.4:7833481-7833500 | None:intergenic | 30.0% | |
| CAAGGCTATCTAATAGAATT+AGG | - | chr7.4:7834041-7834060 | None:intergenic | 30.0% | |
| CATGTTCAGAAGCTTAATTT+AGG | - | chr7.4:7833955-7833974 | None:intergenic | 30.0% | |
| GTCATCAATAATTGTGTAAC+AGG | - | chr7.4:7834491-7834510 | None:intergenic | 30.0% | |
| TTGTGAACTCAAAATGTAAG+AGG | + | chr7.4:7833801-7833820 | MS.gene007336:CDS | 30.0% | |
| ! | TCAAGTACCCATCATATTTT+TGG | + | chr7.4:7833253-7833272 | MS.gene007336:intron | 30.0% |
| !!! | TACATTTTGAGTTCACAAAG+AGG | - | chr7.4:7833799-7833818 | None:intergenic | 30.0% |
| !!! | TGCATTTTGATTGAACTAGT+GGG | + | chr7.4:7833492-7833511 | MS.gene007336:intron | 30.0% |
| !!! | TTGCATTTTGATTGAACTAG+TGG | + | chr7.4:7833491-7833510 | MS.gene007336:intron | 30.0% |
| AATGTAACTAGGTTCATGGA+TGG | - | chr7.4:7833992-7834011 | None:intergenic | 35.0% | |
| CAACAATGTAACTAGGTTCA+TGG | - | chr7.4:7833996-7834015 | None:intergenic | 35.0% | |
| GAATTTATTGCACCCTTGTT+TGG | + | chr7.4:7833524-7833543 | MS.gene007336:intron | 35.0% | |
| GATTCATCAACTAAACCCTA+CGG | - | chr7.4:7833112-7833131 | None:intergenic | 35.0% | |
| GTAACCACAACAATGTAACT+AGG | - | chr7.4:7834003-7834022 | None:intergenic | 35.0% | |
| TGAACCTAGTTACATTGTTG+TGG | + | chr7.4:7833996-7834015 | MS.gene007336:intron | 35.0% | |
| !! | CTTTCTATTATGCTGACTCT+GGG | + | chr7.4:7834279-7834298 | MS.gene007336:intron | 35.0% |
| !!! | TAGTGAGTGGCTTTTGAAAT+CGG | + | chr7.4:7833365-7833384 | MS.gene007336:intron | 35.0% |
| ATAAATCTGATCCCTCTTCC+TGG | - | chr7.4:7833617-7833636 | None:intergenic | 40.0% | |
| ATATTATGCATCTGTCGTGC+AGG | + | chr7.4:7834099-7834118 | MS.gene007336:intron | 40.0% | |
| ATTTCACTGCAGGATTGACT+CGG | - | chr7.4:7834526-7834545 | None:intergenic | 40.0% | |
| CAAAGATTTACCCAGGAAGA+GGG | + | chr7.4:7833603-7833622 | MS.gene007336:CDS | 40.0% | |
| CCAGAGTCAGCATAATAGAA+AGG | - | chr7.4:7834281-7834300 | None:intergenic | 40.0% | |
| GGAGAGGATAAAGAAAACCA+AGG | + | chr7.4:7834549-7834568 | MS.gene007336:CDS | 40.0% | |
| TAAACCCTACGGCAACAAAA+TGG | - | chr7.4:7833101-7833120 | None:intergenic | 40.0% | |
| TAAATCTGATCCCTCTTCCT+GGG | - | chr7.4:7833616-7833635 | None:intergenic | 40.0% | |
| TCAAAGATTTACCCAGGAAG+AGG | + | chr7.4:7833602-7833621 | MS.gene007336:CDS | 40.0% | |
| TCAATCCTGCAGTGAAATCA+AGG | + | chr7.4:7834528-7834547 | MS.gene007336:intron | 40.0% | |
| TTCAAGTGTAGCACCAACAA+TGG | - | chr7.4:7834185-7834204 | None:intergenic | 40.0% | |
| ! | CATCTAAGGCACAAAAGTCA+GGG | + | chr7.4:7834602-7834621 | MS.gene007336:CDS | 40.0% |
| ! | TTCTCCATTTTGTTGCCGTA+GGG | + | chr7.4:7833094-7833113 | MS.gene007336:intron | 40.0% |
| ! | TTTCTCCATTTTGTTGCCGT+AGG | + | chr7.4:7833093-7833112 | MS.gene007336:intron | 40.0% |
| !! | CCTTTCTATTATGCTGACTC+TGG | + | chr7.4:7834278-7834297 | MS.gene007336:intron | 40.0% |
| !! | CTTGGCTTTCTTTTCATCCT+TGG | - | chr7.4:7834569-7834588 | None:intergenic | 40.0% |
| !! | GACAGAGTTCAGTTCTGAAA+TGG | - | chr7.4:7833571-7833590 | None:intergenic | 40.0% |
| !! | TTGAAGGCTTCAACTTGTTG+TGG | - | chr7.4:7833832-7833851 | None:intergenic | 40.0% |
| AAAGAAAGCCAAGAAAGCCG+AGG | + | chr7.4:7834576-7834595 | MS.gene007336:CDS | 45.0% | |
| AAGGCACAAAAGTCAGGGAA+GGG | + | chr7.4:7834607-7834626 | MS.gene007336:CDS | 45.0% | |
| AGGGAAGGGAAATGTTCAGA+AGG | + | chr7.4:7834621-7834640 | MS.gene007336:CDS | 45.0% | |
| AGTGGCTCAAAGATTTACCC+AGG | + | chr7.4:7833596-7833615 | MS.gene007336:CDS | 45.0% | |
| ATGCCCAAGGGTCCTAAAAT+GGG | + | chr7.4:7834649-7834668 | MS.gene007336:CDS | 45.0% | |
| CTCAAGAAGCGGTGAAGAAA+AGG | + | chr7.4:7834128-7834147 | MS.gene007336:CDS | 45.0% | |
| GGGAAGGGAAATGTTCAGAA+GGG | + | chr7.4:7834622-7834641 | MS.gene007336:CDS | 45.0% | |
| GTACAGAAAGCAGCACAAGA+AGG | + | chr7.4:7833871-7833890 | MS.gene007336:CDS | 45.0% | |
| TAAGGCACAAAAGTCAGGGA+AGG | + | chr7.4:7834606-7834625 | MS.gene007336:CDS | 45.0% | |
| TATGCCCAAGGGTCCTAAAA+TGG | + | chr7.4:7834648-7834667 | MS.gene007336:CDS | 45.0% | |
| TGAAGCCTTCAAAGCTCACA+TGG | + | chr7.4:7833840-7833859 | MS.gene007336:CDS | 45.0% | |
| TTGTGCCTTAGATGCTACCT+CGG | - | chr7.4:7834596-7834615 | None:intergenic | 45.0% | |
| ! | GCATCTAAGGCACAAAAGTC+AGG | + | chr7.4:7834601-7834620 | MS.gene007336:CDS | 45.0% |
| !! | ACTGAACTCTGTCGATTCAG+TGG | + | chr7.4:7833578-7833597 | MS.gene007336:CDS | 45.0% |
| !! | CTTGTGCTGCTTTCTGTACA+TGG | - | chr7.4:7833870-7833889 | None:intergenic | 45.0% |
| AGATGCTACCTCGGCTTTCT+TGG | - | chr7.4:7834587-7834606 | None:intergenic | 50.0% | |
| CCAACAATGGACCTGGAGTA+TGG | - | chr7.4:7834172-7834191 | None:intergenic | 50.0% | |
| CCATACTCCAGGTCCATTGT+TGG | + | chr7.4:7834169-7834188 | MS.gene007336:CDS | 50.0% | |
| CCTCTCCTTGATTTCACTGC+AGG | - | chr7.4:7834536-7834555 | None:intergenic | 50.0% | |
| CCTGCAGTGAAATCAAGGAG+AGG | + | chr7.4:7834533-7834552 | MS.gene007336:intron | 50.0% | |
| GAAAGCCGAGGTAGCATCTA+AGG | + | chr7.4:7834588-7834607 | MS.gene007336:CDS | 50.0% | |
| GCAGGACATTGCTCAAGAAG+CGG | + | chr7.4:7834117-7834136 | MS.gene007336:intron | 50.0% | |
| TGTAGCACCAACAATGGACC+TGG | - | chr7.4:7834179-7834198 | None:intergenic | 50.0% | |
| ! | AGTATGGCTTCTTGGTGGCA+CGG | - | chr7.4:7834156-7834175 | None:intergenic | 50.0% |
| ! | GCAGTCCATGTGAGCTTTGA+AGG | - | chr7.4:7833848-7833867 | None:intergenic | 50.0% |
| AAGGGTCCTAAAATGGGCGG+TGG | + | chr7.4:7834655-7834674 | MS.gene007336:CDS | 55.0% | |
| ATCTCGAACCTCGGGCTTCT+CGG | - | chr7.4:7834227-7834246 | None:intergenic | 55.0% | |
| CCACCAAGAAGCCATACTCC+AGG | + | chr7.4:7834158-7834177 | MS.gene007336:CDS | 55.0% | |
| CCCAAGGGTCCTAAAATGGG+CGG | + | chr7.4:7834652-7834671 | MS.gene007336:CDS | 55.0% | |
| CCTAGCAGCATCTCGAACCT+CGG | - | chr7.4:7834236-7834255 | None:intergenic | 55.0% | |
| CCTGGAGTATGGCTTCTTGG+TGG | - | chr7.4:7834161-7834180 | None:intergenic | 55.0% | |
| CGAGGTTCGAGATGCTGCTA+GGG | + | chr7.4:7834234-7834253 | MS.gene007336:CDS | 55.0% | |
| CTAGCAGCATCTCGAACCTC+GGG | - | chr7.4:7834235-7834254 | None:intergenic | 55.0% | |
| CTGCTAGGGAAGCTGCTCTT+CGG | + | chr7.4:7834248-7834267 | MS.gene007336:CDS | 55.0% | |
| GAAAAGAACCGAGAAGCCCG+AGG | + | chr7.4:7834216-7834235 | MS.gene007336:CDS | 55.0% | |
| GGACCTGGAGTATGGCTTCT+TGG | - | chr7.4:7834164-7834183 | None:intergenic | 55.0% | |
| ! | CTAAAATGGGCGGTGGTGGT+GGG | + | chr7.4:7834662-7834681 | MS.gene007336:CDS | 55.0% |
| !! | CAGAAGGGTGCTATGCCCAA+GGG | + | chr7.4:7834637-7834656 | MS.gene007336:CDS | 55.0% |
| !! | TCAGAAGGGTGCTATGCCCA+AGG | + | chr7.4:7834636-7834655 | MS.gene007336:CDS | 55.0% |
| !!! | ACCGCCCATTTTAGGACCCT+TGG | - | chr7.4:7834656-7834675 | None:intergenic | 55.0% |
| !!! | CCGCCCATTTTAGGACCCTT+GGG | - | chr7.4:7834655-7834674 | None:intergenic | 55.0% |
| CCGAGGTTCGAGATGCTGCT+AGG | + | chr7.4:7834233-7834252 | MS.gene007336:CDS | 60.0% | |
| GGTCCTAAAATGGGCGGTGG+TGG | + | chr7.4:7834658-7834677 | MS.gene007336:CDS | 60.0% | |
| ! | CCACCACCACCGCCCATTTT+AGG | - | chr7.4:7834664-7834683 | None:intergenic | 60.0% |
| ! | CCTAAAATGGGCGGTGGTGG+TGG | + | chr7.4:7834661-7834680 | MS.gene007336:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 7833014 | 7834693 | 7833014 | ID=MS.gene007336 |
| chr7.4 | mRNA | 7833014 | 7834693 | 7833014 | ID=MS.gene007336.t1;Parent=MS.gene007336 |
| chr7.4 | exon | 7833014 | 7833024 | 7833014 | ID=MS.gene007336.t1.exon1;Parent=MS.gene007336.t1 |
| chr7.4 | CDS | 7833014 | 7833024 | 7833014 | ID=cds.MS.gene007336.t1;Parent=MS.gene007336.t1 |
| chr7.4 | exon | 7833577 | 7833652 | 7833577 | ID=MS.gene007336.t1.exon2;Parent=MS.gene007336.t1 |
| chr7.4 | CDS | 7833577 | 7833652 | 7833577 | ID=cds.MS.gene007336.t1;Parent=MS.gene007336.t1 |
| chr7.4 | exon | 7833791 | 7833892 | 7833791 | ID=MS.gene007336.t1.exon3;Parent=MS.gene007336.t1 |
| chr7.4 | CDS | 7833791 | 7833892 | 7833791 | ID=cds.MS.gene007336.t1;Parent=MS.gene007336.t1 |
| chr7.4 | exon | 7834121 | 7834269 | 7834121 | ID=MS.gene007336.t1.exon4;Parent=MS.gene007336.t1 |
| chr7.4 | CDS | 7834121 | 7834269 | 7834121 | ID=cds.MS.gene007336.t1;Parent=MS.gene007336.t1 |
| chr7.4 | exon | 7834540 | 7834693 | 7834540 | ID=MS.gene007336.t1.exon5;Parent=MS.gene007336.t1 |
| chr7.4 | CDS | 7834540 | 7834693 | 7834540 | ID=cds.MS.gene007336.t1;Parent=MS.gene007336.t1 |
| Gene Sequence |
| Protein sequence |
