Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24639.t1 | XP_013450065.1 | 100 | 163 | 0 | 0 | 1 | 163 | 1 | 163 | 1.00E-62 | 249.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24639.t1 | O65743 | 95.1 | 163 | 7 | 1 | 1 | 162 | 1 | 163 | 3.6e-61 | 235.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24639.t1 | I3SKQ8 | 100.0 | 163 | 0 | 0 | 1 | 163 | 1 | 163 | 7.2e-63 | 249.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049361 | MS.gene24639 | 0.803667 | 3.12E-49 | -1.69E-46 |
| MS.gene050134 | MS.gene24639 | 0.875593 | 2.73E-68 | -1.69E-46 |
| MS.gene050252 | MS.gene24639 | 0.814885 | 1.23E-51 | -1.69E-46 |
| MS.gene050791 | MS.gene24639 | 0.921495 | 3.33E-88 | -1.69E-46 |
| MS.gene050912 | MS.gene24639 | 0.843789 | 1.13E-58 | -1.69E-46 |
| MS.gene051904 | MS.gene24639 | 0.819802 | 9.59E-53 | -1.69E-46 |
| MS.gene051984 | MS.gene24639 | 0.813322 | 2.71E-51 | -1.69E-46 |
| MS.gene052412 | MS.gene24639 | 0.832399 | 9.67E-56 | -1.69E-46 |
| MS.gene052664 | MS.gene24639 | 0.801841 | 7.44E-49 | -1.69E-46 |
| MS.gene053224 | MS.gene24639 | 0.857152 | 1.98E-62 | -1.69E-46 |
| MS.gene056917 | MS.gene24639 | 0.810971 | 8.84E-51 | -1.69E-46 |
| MS.gene057272 | MS.gene24639 | 0.890998 | 5.93E-74 | -1.69E-46 |
| MS.gene057641 | MS.gene24639 | 0.840829 | 6.87E-58 | -1.69E-46 |
| MS.gene057643 | MS.gene24639 | 0.881491 | 2.30E-70 | -1.69E-46 |
| MS.gene060432 | MS.gene24639 | 0.823605 | 1.27E-53 | -1.69E-46 |
| MS.gene060483 | MS.gene24639 | 0.85571 | 5.25E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene24639 | MS.gene020578 | PPI |
| MS.gene049306 | MS.gene24639 | PPI |
| MS.gene07704 | MS.gene24639 | PPI |
| MS.gene24639 | MS.gene007334 | PPI |
| MS.gene24639 | MS.gene007335 | PPI |
| MS.gene007336 | MS.gene24639 | PPI |
| MS.gene24639 | MS.gene47371 | PPI |
| MS.gene24639 | MS.gene007610 | PPI |
| MS.gene24639 | MS.gene30990 | PPI |
| MS.gene013335 | MS.gene24639 | PPI |
| MS.gene24639 | MS.gene23040 | PPI |
| MS.gene24639 | MS.gene06433 | PPI |
| MS.gene24639 | MS.gene065297 | PPI |
| MS.gene24639 | MS.gene007607 | PPI |
| MS.gene24639 | MS.gene020577 | PPI |
| MS.gene034951 | MS.gene24639 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24639.t1 | MTR_7g103320 | 100.000 | 163 | 0 | 0 | 1 | 163 | 1 | 163 | 5.20e-117 | 328 |
| MS.gene24639.t1 | MTR_7g103320 | 100.000 | 163 | 0 | 0 | 1 | 163 | 1 | 163 | 5.20e-117 | 328 |
| MS.gene24639.t1 | MTR_7g103320 | 100.000 | 163 | 0 | 0 | 1 | 163 | 1 | 163 | 5.20e-117 | 328 |
| MS.gene24639.t1 | MTR_1g061670 | 95.333 | 150 | 6 | 1 | 1 | 149 | 1 | 150 | 7.69e-90 | 259 |
| MS.gene24639.t1 | MTR_4g104930 | 79.630 | 54 | 10 | 1 | 43 | 96 | 13 | 65 | 2.18e-23 | 87.8 |
| MS.gene24639.t1 | MTR_4g055270 | 36.842 | 95 | 58 | 1 | 3 | 95 | 1 | 95 | 2.81e-18 | 77.4 |
| MS.gene24639.t1 | MTR_2g084925 | 34.409 | 93 | 59 | 1 | 3 | 93 | 1 | 93 | 8.49e-15 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24639.t1 | AT2G36620 | 89.172 | 157 | 16 | 1 | 1 | 156 | 1 | 157 | 1.94e-88 | 255 |
| MS.gene24639.t1 | AT3G53020 | 89.933 | 149 | 14 | 1 | 1 | 149 | 1 | 148 | 1.08e-83 | 243 |
| MS.gene24639.t1 | AT2G44860 | 36.719 | 128 | 68 | 5 | 3 | 126 | 1 | 119 | 8.77e-18 | 75.9 |
| MS.gene24639.t1 | AT2G44860 | 36.719 | 128 | 68 | 5 | 3 | 126 | 1 | 119 | 8.77e-18 | 75.9 |
Find 50 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATGCTACTTCGGCTTTCT+TGG | 0.236901 | 7.4:-7818815 | None:intergenic |
| CCTAAAATGGGCGGTGGTGG+TGG | 0.259183 | 7.4:+7818892 | MS.gene24639:CDS |
| TATGCCCAAGGGTCCTAAAA+TGG | 0.286938 | 7.4:+7818879 | MS.gene24639:CDS |
| CTTGGCTTTCTTCTCATCCT+TGG | 0.290844 | 7.4:-7818797 | None:intergenic |
| ATCTCGAACCTCGGGCTTCT+CGG | 0.307520 | 7.4:-7818527 | None:intergenic |
| CTTGTGCTGCTTTCTGTACA+TGG | 0.329814 | 7.4:-7818170 | None:intergenic |
| GGACCTGGAGTATGGCTTCT+TGG | 0.357806 | 7.4:-7818464 | None:intergenic |
| GAAAGCCGAAGTAGCATCTA+AGG | 0.360444 | 7.4:+7818819 | MS.gene24639:CDS |
| ATAAATCTGATCCCTCTTCC+TGG | 0.395884 | 7.4:-7817917 | None:intergenic |
| GCAGTCCATGTAAGCTTTGA+AGG | 0.396337 | 7.4:-7818148 | None:intergenic |
| GCATCTAAGGCACAAAAGTC+AGG | 0.405098 | 7.4:+7818832 | MS.gene24639:CDS |
| CCAACAATGGACCTGGAGTA+TGG | 0.414209 | 7.4:-7818472 | None:intergenic |
| ATTTATTCGTAGTGATTCTC+AGG | 0.428494 | 7.4:+7817934 | MS.gene24639:CDS |
| CCTAGCAGCATCTCGAACCT+CGG | 0.438375 | 7.4:-7818536 | None:intergenic |
| GGTCCTAAAATGGGCGGTGG+TGG | 0.445895 | 7.4:+7818889 | MS.gene24639:CDS |
| TTGTGAACTCAAAATGTAAG+AGG | 0.457107 | 7.4:+7818104 | MS.gene24639:CDS |
| TTGAAGGCTTCAACTTGTTG+TGG | 0.467148 | 7.4:-7818132 | None:intergenic |
| TGAAGCCTTCAAAGCTTACA+TGG | 0.470130 | 7.4:+7818143 | MS.gene24639:CDS |
| GCAAAGATTTACCCAGGAAG+AGG | 0.473275 | 7.4:+7817905 | MS.gene24639:CDS |
| ATGCCCAAGGGTCCTAAAAT+GGG | 0.479062 | 7.4:+7818880 | MS.gene24639:CDS |
| CTGCTAGGGAAGCTGCTCTT+CGG | 0.488937 | 7.4:+7818551 | MS.gene24639:CDS |
| CCATACTCCAGGTCCATTGT+TGG | 0.499932 | 7.4:+7818472 | MS.gene24639:CDS |
| TCAATCCCGCAGTGAAATCA+AGG | 0.506619 | 7.4:+7818759 | MS.gene24639:intron |
| CTAGCAGCATCTCGAACCTC+GGG | 0.515819 | 7.4:-7818535 | None:intergenic |
| CTAAAATGGGCGGTGGTGGT+GGG | 0.525722 | 7.4:+7818893 | MS.gene24639:CDS |
| CTCAAGAAGCTGTGAAGAAG+AGG | 0.530274 | 7.4:+7818431 | MS.gene24639:CDS |
| CCGAGGTTCGAGATGCTGCT+AGG | 0.531808 | 7.4:+7818536 | MS.gene24639:CDS |
| CGAGGTTCGAGATGCTGCTA+GGG | 0.538000 | 7.4:+7818537 | MS.gene24639:CDS |
| TTGTGCCTTAGATGCTACTT+CGG | 0.538791 | 7.4:-7818824 | None:intergenic |
| AGGGAAAGGCAATGTTCAGA+AGG | 0.551183 | 7.4:+7818852 | MS.gene24639:CDS |
| CCTGGAGTATGGCTTCTTGG+TGG | 0.554085 | 7.4:-7818461 | None:intergenic |
| TAAATCTGATCCCTCTTCCT+GGG | 0.554260 | 7.4:-7817916 | None:intergenic |
| TTCAAGTGTAGCACCAACAA+TGG | 0.581573 | 7.4:-7818485 | None:intergenic |
| AAGGGTCCTAAAATGGGCGG+TGG | 0.584819 | 7.4:+7818886 | MS.gene24639:CDS |
| TCAGAAGGGTGCTATGCCCA+AGG | 0.589737 | 7.4:+7818867 | MS.gene24639:CDS |
| CAAAGATTTACCCAGGAAGA+GGG | 0.595056 | 7.4:+7817906 | MS.gene24639:CDS |
| ACTGAACTCTGTCGATTCAG+TGG | 0.599671 | 7.4:+7817881 | MS.gene24639:CDS |
| CCACCAAGAAGCCATACTCC+AGG | 0.600767 | 7.4:+7818461 | MS.gene24639:CDS |
| AAGGCACAAAAGTCAGGGAA+AGG | 0.600921 | 7.4:+7818838 | MS.gene24639:CDS |
| CAGAAGGGTGCTATGCCCAA+GGG | 0.602938 | 7.4:+7818868 | MS.gene24639:CDS |
| AGTATGGCTTCTTGGTGGCA+CGG | 0.604625 | 7.4:-7818456 | None:intergenic |
| CATCTAAGGCACAAAAGTCA+GGG | 0.612277 | 7.4:+7818833 | MS.gene24639:CDS |
| TGTAGCACCAACAATGGACC+TGG | 0.616016 | 7.4:-7818479 | None:intergenic |
| GAAAAGAACCGAGAAGCCCG+AGG | 0.642434 | 7.4:+7818519 | MS.gene24639:CDS |
| AGTGGCGCAAAGATTTACCC+AGG | 0.643624 | 7.4:+7817899 | MS.gene24639:CDS |
| GTACAGAAAGCAGCACAAGA+AGG | 0.650232 | 7.4:+7818174 | MS.gene24639:CDS |
| CCCAAGGGTCCTAAAATGGG+CGG | 0.653433 | 7.4:+7818883 | MS.gene24639:CDS |
| GGGAAAGGCAATGTTCAGAA+GGG | 0.656870 | 7.4:+7818853 | MS.gene24639:CDS |
| CCCGCAGTGAAATCAAGGAG+AGG | 0.678239 | 7.4:+7818764 | MS.gene24639:intron |
| GGAGAGGATAAAGAAAACCA+AGG | 0.682479 | 7.4:+7818780 | MS.gene24639:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAAAAAAAAAAAAAAAG+AGG | - | chr7.4:7818611-7818630 | None:intergenic | 10.0% |
| !!! | ATCTTAGTTTTATTGATATA+AGG | + | chr7.4:7818046-7818065 | MS.gene24639:intron | 15.0% |
| !!! | GTTTTTTTTATTGTTTTTAC+AGG | + | chr7.4:7818072-7818091 | MS.gene24639:intron | 15.0% |
| !! | TTAAAAATTGAAATTGCACA+AGG | - | chr7.4:7817707-7817726 | None:intergenic | 20.0% |
| !! | TTTGATGGAATGTAAAATTT+CGG | + | chr7.4:7817456-7817475 | MS.gene24639:intron | 20.0% |
| !!! | AGATTTAGTTTTATTGTACT+TGG | + | chr7.4:7817430-7817449 | MS.gene24639:intron | 20.0% |
| !!! | CAAAATTCTAAAAATCTGTT+TGG | + | chr7.4:7817527-7817546 | MS.gene24639:intron | 20.0% |
| !!! | CAATTTCAATTTTTAATGAG+TGG | + | chr7.4:7817711-7817730 | MS.gene24639:intron | 20.0% |
| !!! | GATTTAGTTTTATTGTACTT+GGG | + | chr7.4:7817431-7817450 | MS.gene24639:intron | 20.0% |
| !!! | TGGAAATTTAGATTTGTTTT+TGG | + | chr7.4:7817672-7817691 | MS.gene24639:intron | 20.0% |
| !!! | TGTATTTTGATTGAATTAGT+GGG | + | chr7.4:7817794-7817813 | MS.gene24639:intron | 20.0% |
| !!! | TTGTATTTTGATTGAATTAG+TGG | + | chr7.4:7817793-7817812 | MS.gene24639:intron | 20.0% |
| ! | AAAACTGAATGTGTAAATGA+TGG | - | chr7.4:7817350-7817369 | None:intergenic | 25.0% |
| ! | AAATCAACCAAAGCTATAAT+GGG | - | chr7.4:7817619-7817638 | None:intergenic | 25.0% |
| ! | AGTAGTAAAATTACTAGACA+AGG | - | chr7.4:7818362-7818381 | None:intergenic | 25.0% |
| ! | ATAATCATAGAACACTGTTT+CGG | - | chr7.4:7817492-7817511 | None:intergenic | 25.0% |
| ! | CAAAATACAATAACAGTGAA+TGG | - | chr7.4:7817783-7817802 | None:intergenic | 25.0% |
| ! | GATTCATCAACTAAACATTA+CGG | - | chr7.4:7817409-7817428 | None:intergenic | 25.0% |
| ! | TAAATCAACCAAAGCTATAA+TGG | - | chr7.4:7817620-7817639 | None:intergenic | 25.0% |
| !! | CATTTACACATTCAGTTTTA+GGG | + | chr7.4:7817351-7817370 | MS.gene24639:intron | 25.0% |
| !! | TCATTTACACATTCAGTTTT+AGG | + | chr7.4:7817350-7817369 | MS.gene24639:intron | 25.0% |
| !! | TTTGCAATTTTTGATGCTAT+TGG | + | chr7.4:7817652-7817671 | MS.gene24639:intron | 25.0% |
| !!! | AAGCTTAATTTAGCTTTACA+CGG | - | chr7.4:7818249-7818268 | None:intergenic | 25.0% |
| AAAGAGTCGGCATAATAAAA+AGG | - | chr7.4:7818584-7818603 | None:intergenic | 30.0% | |
| ATTTATTCGTAGTGATTCTC+AGG | + | chr7.4:7817934-7817953 | MS.gene24639:CDS | 30.0% | |
| CAGTGTTCTATGATTATTGT+AGG | + | chr7.4:7817495-7817514 | MS.gene24639:intron | 30.0% | |
| GAGATAAAAATGACTCATGT+TGG | + | chr7.4:7817958-7817977 | MS.gene24639:intron | 30.0% | |
| TATTGTACTTGGGAATTTGA+TGG | + | chr7.4:7817441-7817460 | MS.gene24639:intron | 30.0% | |
| TTGTGAACTCAAAATGTAAG+AGG | + | chr7.4:7818104-7818123 | MS.gene24639:CDS | 30.0% | |
| ! | TACTAACTTTTCCACACAAA+GGG | - | chr7.4:7817841-7817860 | None:intergenic | 30.0% |
| ! | TTACTAACTTTTCCACACAA+AGG | - | chr7.4:7817842-7817861 | None:intergenic | 30.0% |
| !!! | AAATGACTCATGTTGGTTTT+TGG | + | chr7.4:7817965-7817984 | MS.gene24639:intron | 30.0% |
| !!! | TACATTTTGAGTTCACAAAG+AGG | - | chr7.4:7818102-7818121 | None:intergenic | 30.0% |
| AAAAAGAGGTCTCAAAGAGT+CGG | - | chr7.4:7818597-7818616 | None:intergenic | 35.0% | |
| AATGTAACTAGGTTCATGGA+TGG | - | chr7.4:7818295-7818314 | None:intergenic | 35.0% | |
| ATATTATGCATCTGTTGTGC+AGG | + | chr7.4:7818402-7818421 | MS.gene24639:intron | 35.0% | |
| CAACAATGTAACTAGGTTCA+TGG | - | chr7.4:7818299-7818318 | None:intergenic | 35.0% | |
| CAAGGCTATCTCATAGAATT+AGG | - | chr7.4:7818344-7818363 | None:intergenic | 35.0% | |
| GTAACCACAACAATGTAACT+AGG | - | chr7.4:7818306-7818325 | None:intergenic | 35.0% | |
| TCAAGTACCCATTATAGCTT+TGG | + | chr7.4:7817609-7817628 | MS.gene24639:intron | 35.0% | |
| TGAACCTAGTTACATTGTTG+TGG | + | chr7.4:7818299-7818318 | MS.gene24639:intron | 35.0% | |
| AATTTATTGCGCCCTTTGTG+TGG | + | chr7.4:7817827-7817846 | MS.gene24639:intron | 40.0% | |
| ATAAATCTGATCCCTCTTCC+TGG | - | chr7.4:7817920-7817939 | None:intergenic | 40.0% | |
| CAAAGATTTACCCAGGAAGA+GGG | + | chr7.4:7817906-7817925 | MS.gene24639:CDS | 40.0% | |
| GGAGAGGATAAAGAAAACCA+AGG | + | chr7.4:7818780-7818799 | MS.gene24639:CDS | 40.0% | |
| TAAATCTGATCCCTCTTCCT+GGG | - | chr7.4:7817919-7817938 | None:intergenic | 40.0% | |
| TGAAGCCTTCAAAGCTTACA+TGG | + | chr7.4:7818143-7818162 | MS.gene24639:CDS | 40.0% | |
| TTCAAGTGTAGCACCAACAA+TGG | - | chr7.4:7818488-7818507 | None:intergenic | 40.0% | |
| ! | CATCTAAGGCACAAAAGTCA+GGG | + | chr7.4:7818833-7818852 | MS.gene24639:CDS | 40.0% |
| ! | TTGTGCCTTAGATGCTACTT+CGG | - | chr7.4:7818827-7818846 | None:intergenic | 40.0% |
| !! | GACAGAGTTCAGTTCTGAAA+TGG | - | chr7.4:7817874-7817893 | None:intergenic | 40.0% |
| !! | TTGAAGGCTTCAACTTGTTG+TGG | - | chr7.4:7818135-7818154 | None:intergenic | 40.0% |
| AAGGCACAAAAGTCAGGGAA+AGG | + | chr7.4:7818838-7818857 | MS.gene24639:CDS | 45.0% | |
| AGGGAAAGGCAATGTTCAGA+AGG | + | chr7.4:7818852-7818871 | MS.gene24639:CDS | 45.0% | |
| ATGCCCAAGGGTCCTAAAAT+GGG | + | chr7.4:7818880-7818899 | MS.gene24639:CDS | 45.0% | |
| ATTTCACTGCGGGATTGACT+CGG | - | chr7.4:7818757-7818776 | None:intergenic | 45.0% | |
| CTCAAGAAGCTGTGAAGAAG+AGG | + | chr7.4:7818431-7818450 | MS.gene24639:CDS | 45.0% | |
| GAAAGCCGAAGTAGCATCTA+AGG | + | chr7.4:7818819-7818838 | MS.gene24639:CDS | 45.0% | |
| GCAAAGATTTACCCAGGAAG+AGG | + | chr7.4:7817905-7817924 | MS.gene24639:CDS | 45.0% | |
| GGGAAAGGCAATGTTCAGAA+GGG | + | chr7.4:7818853-7818872 | MS.gene24639:CDS | 45.0% | |
| GTACAGAAAGCAGCACAAGA+AGG | + | chr7.4:7818174-7818193 | MS.gene24639:CDS | 45.0% | |
| TATGCCCAAGGGTCCTAAAA+TGG | + | chr7.4:7818879-7818898 | MS.gene24639:CDS | 45.0% | |
| TCAATCCCGCAGTGAAATCA+AGG | + | chr7.4:7818759-7818778 | MS.gene24639:intron | 45.0% | |
| TCCTCTCCTTGATTTCACTG+CGG | - | chr7.4:7818768-7818787 | None:intergenic | 45.0% | |
| ! | AGATGCTACTTCGGCTTTCT+TGG | - | chr7.4:7818818-7818837 | None:intergenic | 45.0% |
| ! | CTTGGCTTTCTTCTCATCCT+TGG | - | chr7.4:7818800-7818819 | None:intergenic | 45.0% |
| ! | GCAGTCCATGTAAGCTTTGA+AGG | - | chr7.4:7818151-7818170 | None:intergenic | 45.0% |
| ! | GCATCTAAGGCACAAAAGTC+AGG | + | chr7.4:7818832-7818851 | MS.gene24639:CDS | 45.0% |
| !! | ACTGAACTCTGTCGATTCAG+TGG | + | chr7.4:7817881-7817900 | MS.gene24639:CDS | 45.0% |
| !! | CTTGTGCTGCTTTCTGTACA+TGG | - | chr7.4:7818173-7818192 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTTTTTTTTTCA+TGG | + | chr7.4:7818612-7818631 | MS.gene24639:intron | 5.0% |
| AGTGGCGCAAAGATTTACCC+AGG | + | chr7.4:7817899-7817918 | MS.gene24639:CDS | 50.0% | |
| CCAACAATGGACCTGGAGTA+TGG | - | chr7.4:7818475-7818494 | None:intergenic | 50.0% | |
| CCATACTCCAGGTCCATTGT+TGG | + | chr7.4:7818472-7818491 | MS.gene24639:CDS | 50.0% | |
| CCTCTCCTTGATTTCACTGC+GGG | - | chr7.4:7818767-7818786 | None:intergenic | 50.0% | |
| TGTAGCACCAACAATGGACC+TGG | - | chr7.4:7818482-7818501 | None:intergenic | 50.0% | |
| ! | AGTATGGCTTCTTGGTGGCA+CGG | - | chr7.4:7818459-7818478 | None:intergenic | 50.0% |
| AAGGGTCCTAAAATGGGCGG+TGG | + | chr7.4:7818886-7818905 | MS.gene24639:CDS | 55.0% | |
| ATCTCGAACCTCGGGCTTCT+CGG | - | chr7.4:7818530-7818549 | None:intergenic | 55.0% | |
| CCACCAAGAAGCCATACTCC+AGG | + | chr7.4:7818461-7818480 | MS.gene24639:CDS | 55.0% | |
| CCCAAGGGTCCTAAAATGGG+CGG | + | chr7.4:7818883-7818902 | MS.gene24639:CDS | 55.0% | |
| CCCGCAGTGAAATCAAGGAG+AGG | + | chr7.4:7818764-7818783 | MS.gene24639:intron | 55.0% | |
| CCTAGCAGCATCTCGAACCT+CGG | - | chr7.4:7818539-7818558 | None:intergenic | 55.0% | |
| CCTGGAGTATGGCTTCTTGG+TGG | - | chr7.4:7818464-7818483 | None:intergenic | 55.0% | |
| CGAGGTTCGAGATGCTGCTA+GGG | + | chr7.4:7818537-7818556 | MS.gene24639:CDS | 55.0% | |
| CTAGCAGCATCTCGAACCTC+GGG | - | chr7.4:7818538-7818557 | None:intergenic | 55.0% | |
| CTGCTAGGGAAGCTGCTCTT+CGG | + | chr7.4:7818551-7818570 | MS.gene24639:CDS | 55.0% | |
| GAAAAGAACCGAGAAGCCCG+AGG | + | chr7.4:7818519-7818538 | MS.gene24639:CDS | 55.0% | |
| GGACCTGGAGTATGGCTTCT+TGG | - | chr7.4:7818467-7818486 | None:intergenic | 55.0% | |
| ! | CTAAAATGGGCGGTGGTGGT+GGG | + | chr7.4:7818893-7818912 | MS.gene24639:CDS | 55.0% |
| !! | CAGAAGGGTGCTATGCCCAA+GGG | + | chr7.4:7818868-7818887 | MS.gene24639:CDS | 55.0% |
| !! | TCAGAAGGGTGCTATGCCCA+AGG | + | chr7.4:7818867-7818886 | MS.gene24639:CDS | 55.0% |
| !!! | ACCGCCCATTTTAGGACCCT+TGG | - | chr7.4:7818887-7818906 | None:intergenic | 55.0% |
| !!! | CCGCCCATTTTAGGACCCTT+GGG | - | chr7.4:7818886-7818905 | None:intergenic | 55.0% |
| CCGAGGTTCGAGATGCTGCT+AGG | + | chr7.4:7818536-7818555 | MS.gene24639:CDS | 60.0% | |
| GGTCCTAAAATGGGCGGTGG+TGG | + | chr7.4:7818889-7818908 | MS.gene24639:CDS | 60.0% | |
| ! | CCACCACCACCGCCCATTTT+AGG | - | chr7.4:7818895-7818914 | None:intergenic | 60.0% |
| ! | CCTAAAATGGGCGGTGGTGG+TGG | + | chr7.4:7818892-7818911 | MS.gene24639:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 7817311 | 7818924 | 7817311 | ID=MS.gene24639 |
| chr7.4 | mRNA | 7817311 | 7818924 | 7817311 | ID=MS.gene24639.t1;Parent=MS.gene24639 |
| chr7.4 | exon | 7817311 | 7817321 | 7817311 | ID=MS.gene24639.t1.exon1;Parent=MS.gene24639.t1 |
| chr7.4 | CDS | 7817311 | 7817321 | 7817311 | ID=cds.MS.gene24639.t1;Parent=MS.gene24639.t1 |
| chr7.4 | exon | 7817880 | 7817955 | 7817880 | ID=MS.gene24639.t1.exon2;Parent=MS.gene24639.t1 |
| chr7.4 | CDS | 7817880 | 7817955 | 7817880 | ID=cds.MS.gene24639.t1;Parent=MS.gene24639.t1 |
| chr7.4 | exon | 7818094 | 7818195 | 7818094 | ID=MS.gene24639.t1.exon3;Parent=MS.gene24639.t1 |
| chr7.4 | CDS | 7818094 | 7818195 | 7818094 | ID=cds.MS.gene24639.t1;Parent=MS.gene24639.t1 |
| chr7.4 | exon | 7818424 | 7818572 | 7818424 | ID=MS.gene24639.t1.exon4;Parent=MS.gene24639.t1 |
| chr7.4 | CDS | 7818424 | 7818572 | 7818424 | ID=cds.MS.gene24639.t1;Parent=MS.gene24639.t1 |
| chr7.4 | exon | 7818771 | 7818924 | 7818771 | ID=MS.gene24639.t1.exon5;Parent=MS.gene24639.t1 |
| chr7.4 | CDS | 7818771 | 7818924 | 7818771 | ID=cds.MS.gene24639.t1;Parent=MS.gene24639.t1 |
| Gene Sequence |
| Protein sequence |
