Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020577.t1 | XP_013450065.1 | 99.4 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 2.20E-62 | 248.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020577.t1 | O65743 | 94.5 | 163 | 8 | 1 | 1 | 162 | 1 | 163 | 8.0e-61 | 234.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020577.t1 | I3SKQ8 | 99.4 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.6e-62 | 248.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene007610 | MS.gene020577 | PPI |
| MS.gene049306 | MS.gene020577 | PPI |
| MS.gene07704 | MS.gene020577 | PPI |
| MS.gene020577 | MS.gene007334 | PPI |
| MS.gene007336 | MS.gene020577 | PPI |
| MS.gene020577 | MS.gene007335 | PPI |
| MS.gene020577 | MS.gene007607 | PPI |
| MS.gene020577 | MS.gene47371 | PPI |
| MS.gene065297 | MS.gene020577 | PPI |
| MS.gene013335 | MS.gene020577 | PPI |
| MS.gene30990 | MS.gene020577 | PPI |
| MS.gene23040 | MS.gene020577 | PPI |
| MS.gene24639 | MS.gene020577 | PPI |
| MS.gene020577 | MS.gene06433 | PPI |
| MS.gene020578 | MS.gene020577 | PPI |
| MS.gene034951 | MS.gene020577 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020577.t1 | MTR_7g103320 | 99.387 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.54e-116 | 327 |
| MS.gene020577.t1 | MTR_7g103320 | 99.387 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.54e-116 | 327 |
| MS.gene020577.t1 | MTR_7g103320 | 99.387 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.54e-116 | 327 |
| MS.gene020577.t1 | MTR_1g061670 | 94.667 | 150 | 7 | 1 | 1 | 149 | 1 | 150 | 2.40e-89 | 258 |
| MS.gene020577.t1 | MTR_4g104930 | 79.630 | 54 | 10 | 1 | 43 | 96 | 13 | 65 | 2.16e-23 | 87.8 |
| MS.gene020577.t1 | MTR_4g055270 | 37.895 | 95 | 57 | 1 | 3 | 95 | 1 | 95 | 1.05e-18 | 78.6 |
| MS.gene020577.t1 | MTR_2g084925 | 35.484 | 93 | 58 | 1 | 3 | 93 | 1 | 93 | 3.11e-15 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020577.t1 | AT2G36620 | 89.172 | 157 | 16 | 1 | 1 | 156 | 1 | 157 | 1.36e-88 | 256 |
| MS.gene020577.t1 | AT3G53020 | 89.933 | 149 | 14 | 1 | 1 | 149 | 1 | 148 | 7.35e-84 | 244 |
| MS.gene020577.t1 | AT2G44860 | 37.500 | 128 | 67 | 5 | 3 | 126 | 1 | 119 | 3.26e-18 | 77.0 |
| MS.gene020577.t1 | AT2G44860 | 37.500 | 128 | 67 | 5 | 3 | 126 | 1 | 119 | 3.26e-18 | 77.0 |
Find 53 sgRNAs with CRISPR-Local
Find 107 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATGCTACCTCGGCTTTCT+TGG | 0.251083 | 7.2:+9438756 | None:intergenic |
| CCTAAAATGGGCGGTGGTGG+TGG | 0.259183 | 7.2:-9438679 | MS.gene020577:CDS |
| TATGCCCAAGGGTCCTAAAA+TGG | 0.286938 | 7.2:-9438692 | MS.gene020577:CDS |
| ATCTCGAACCTCGGGCTTCT+CGG | 0.307520 | 7.2:+9439116 | None:intergenic |
| CTTGTGCTGCTTTCTGTACA+TGG | 0.329814 | 7.2:+9439473 | None:intergenic |
| GGACCTGGAGTATGGCTTCT+TGG | 0.357806 | 7.2:+9439179 | None:intergenic |
| GCAGTCCATGTGAGCTTTGA+AGG | 0.357906 | 7.2:+9439495 | None:intergenic |
| GAAAGCCGAGGTAGCATCTA+AGG | 0.361381 | 7.2:-9438752 | MS.gene020577:CDS |
| CTCAAGAAGCGGTGAAGAAA+AGG | 0.395866 | 7.2:-9439212 | MS.gene020577:CDS |
| ATAAATCTGATCCCTCTTCC+TGG | 0.395884 | 7.2:+9439730 | None:intergenic |
| GCATCTAAGGCACAAAAGTC+AGG | 0.405098 | 7.2:-9438739 | MS.gene020577:CDS |
| CCAACAATGGACCTGGAGTA+TGG | 0.414209 | 7.2:+9439171 | None:intergenic |
| ATTTATTCGTAGTGATTCTC+AGG | 0.428494 | 7.2:-9439713 | MS.gene020577:intron |
| CCTAGCAGCATCTCGAACCT+CGG | 0.438375 | 7.2:+9439107 | None:intergenic |
| GGTCCTAAAATGGGCGGTGG+TGG | 0.445895 | 7.2:-9438682 | MS.gene020577:CDS |
| TTGTGAACTCAAAATGTAAG+AGG | 0.457107 | 7.2:-9439539 | MS.gene020577:CDS |
| TCAAAGATTTACCCAGGAAG+AGG | 0.465260 | 7.2:-9439742 | MS.gene020577:CDS |
| TTGAAGGCTTCAACTTGTTG+TGG | 0.467148 | 7.2:+9439511 | None:intergenic |
| ATGCCCAAGGGTCCTAAAAT+GGG | 0.479062 | 7.2:-9438691 | MS.gene020577:CDS |
| CTGCTAGGGAAGCTGCTCTT+CGG | 0.488937 | 7.2:-9439092 | MS.gene020577:intron |
| CCATACTCCAGGTCCATTGT+TGG | 0.499932 | 7.2:-9439171 | MS.gene020577:CDS |
| TCAATCCCGCAGTGAAATCA+AGG | 0.506619 | 7.2:-9438812 | MS.gene020577:intron |
| CTAGCAGCATCTCGAACCTC+GGG | 0.515819 | 7.2:+9439108 | None:intergenic |
| CTAAAATGGGCGGTGGTGGT+GGG | 0.525722 | 7.2:-9438678 | MS.gene020577:CDS |
| CCGAGGTTCGAGATGCTGCT+AGG | 0.531808 | 7.2:-9439107 | MS.gene020577:CDS |
| CGAGGTTCGAGATGCTGCTA+GGG | 0.538000 | 7.2:-9439106 | MS.gene020577:CDS |
| CCTGGAGTATGGCTTCTTGG+TGG | 0.554085 | 7.2:+9439182 | None:intergenic |
| TAAATCTGATCCCTCTTCCT+GGG | 0.554260 | 7.2:+9439731 | None:intergenic |
| TGAAGCCTTCAAAGCTCACA+TGG | 0.563280 | 7.2:-9439500 | MS.gene020577:CDS |
| TTGTGCCTTAGATGCTACCT+CGG | 0.575585 | 7.2:+9438747 | None:intergenic |
| AGGGAAGGGAAATGTTCAGA+AGG | 0.577296 | 7.2:-9438719 | MS.gene020577:CDS |
| TTCAAGTGTAGCACCAACAA+TGG | 0.581573 | 7.2:+9439158 | None:intergenic |
| AAGGGTCCTAAAATGGGCGG+TGG | 0.584819 | 7.2:-9438685 | MS.gene020577:CDS |
| TCAGAAGGGTGCTATGCCCA+AGG | 0.589737 | 7.2:-9438704 | MS.gene020577:CDS |
| TAAGGCACAAAAGTCAGGGA+AGG | 0.594983 | 7.2:-9438734 | MS.gene020577:CDS |
| CAAAGATTTACCCAGGAAGA+GGG | 0.595056 | 7.2:-9439741 | MS.gene020577:CDS |
| ACTGAACTCTGTCGATTCAG+TGG | 0.599671 | 7.2:-9439766 | MS.gene020577:CDS |
| CCACCAAGAAGCCATACTCC+AGG | 0.600767 | 7.2:-9439182 | MS.gene020577:CDS |
| CAGAAGGGTGCTATGCCCAA+GGG | 0.602938 | 7.2:-9438703 | MS.gene020577:CDS |
| TAAAACTTACTTTAGAACCA+TGG | 0.603222 | 7.2:+9440333 | None:intergenic |
| AGTATGGCTTCTTGGTGGCA+CGG | 0.604625 | 7.2:+9439187 | None:intergenic |
| CATCTAAGGCACAAAAGTCA+GGG | 0.612277 | 7.2:-9438738 | MS.gene020577:CDS |
| TGTAGCACCAACAATGGACC+TGG | 0.616016 | 7.2:+9439164 | None:intergenic |
| AAGGCACAAAAGTCAGGGAA+GGG | 0.622311 | 7.2:-9438733 | MS.gene020577:CDS |
| AGTGGCTCAAAGATTTACCC+AGG | 0.630927 | 7.2:-9439748 | MS.gene020577:CDS |
| GAAAAGAACCGAGAAGCCCG+AGG | 0.642434 | 7.2:-9439124 | MS.gene020577:CDS |
| GCAGGACATTGCTCAAGAAG+CGG | 0.647206 | 7.2:-9439223 | MS.gene020577:intron |
| GTACAGAAAGCAGCACAAGA+AGG | 0.650232 | 7.2:-9439469 | MS.gene020577:intron |
| CCCAAGGGTCCTAAAATGGG+CGG | 0.653433 | 7.2:-9438688 | MS.gene020577:CDS |
| GGGAAGGGAAATGTTCAGAA+GGG | 0.653491 | 7.2:-9438718 | MS.gene020577:CDS |
| AAAGAAAGCCAAGAAAGCCG+AGG | 0.666450 | 7.2:-9438764 | MS.gene020577:CDS |
| CCCGCAGTGAAATCAAGGAG+AGG | 0.678239 | 7.2:-9438807 | MS.gene020577:intron |
| GGAGAGGATAAAGAAAACCA+AGG | 0.682479 | 7.2:-9438791 | MS.gene020577:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCTTTTTTCTTTTTTT+CGG | - | chr7.2:9439977-9439996 | MS.gene020577:intron | 10.0% |
| !!! | TTTTTTTTTATTGTTTTTAC+AGG | - | chr7.2:9439429-9439448 | MS.gene020577:intron | 10.0% |
| !! | AAAGAAAAAAAAAAAAAGAG+AGG | + | chr7.2:9439966-9439985 | None:intergenic | 15.0% |
| !! | CTAAAAATTGAAATTACAAT+AGG | + | chr7.2:9439004-9439023 | None:intergenic | 15.0% |
| !!! | TTAATGTCTAAAAATTTGTT+TGG | - | chr7.2:9438820-9438839 | MS.gene020577:intron | 15.0% |
| !! | AAAATTGAATGTGTAAATGA+TGG | + | chr7.2:9438708-9438727 | None:intergenic | 20.0% |
| !! | AAATCAACCAAAAATATGAT+GGG | + | chr7.2:9438918-9438937 | None:intergenic | 20.0% |
| !! | TAAATCAACCAAAAATATGA+TGG | + | chr7.2:9438919-9438938 | None:intergenic | 20.0% |
| !!! | CATTTACACATTCAATTTTA+GGG | - | chr7.2:9438709-9438728 | MS.gene020577:CDS | 20.0% |
| !!! | TAATTTCAATTTTTAGTGAG+TGG | - | chr7.2:9439008-9439027 | MS.gene020577:intron | 20.0% |
| !!! | TCATTTACACATTCAATTTT+AGG | - | chr7.2:9438708-9438727 | MS.gene020577:CDS | 20.0% |
| !!! | TTGAAAATTAGACATGTTTT+TGG | - | chr7.2:9438970-9438989 | MS.gene020577:intron | 20.0% |
| ! | AAAACAGTGATGAAATTACA+TGG | + | chr7.2:9440097-9440116 | None:intergenic | 25.0% |
| ! | ACAGTAAGTAGTAAAATTAC+TGG | + | chr7.2:9439725-9439744 | None:intergenic | 25.0% |
| ! | CATATCTAATGTACTTCTAA+TGG | + | chr7.2:9439069-9439088 | None:intergenic | 25.0% |
| !! | ATTACTAACTTTTCCAAACA+AGG | + | chr7.2:9439196-9439215 | None:intergenic | 25.0% |
| !! | TTACTAACTTTTCCAAACAA+GGG | + | chr7.2:9439195-9439214 | None:intergenic | 25.0% |
| !! | TTCATTGAGAACTCTTTTTA+TGG | - | chr7.2:9440033-9440052 | MS.gene020577:intron | 25.0% |
| !! | TTGAATGAATATCAGTTTTG+TGG | - | chr7.2:9439359-9439378 | MS.gene020577:intron | 25.0% |
| !!! | GTAATTTCATCACTGTTTTT+TGG | - | chr7.2:9440098-9440117 | MS.gene020577:intron | 25.0% |
| !!! | TGTGTAACTTTTAAGAATGT+TGG | - | chr7.2:9439090-9439109 | MS.gene020577:intron | 25.0% |
| AATTGTGTAACAGGAAAAAC+AGG | + | chr7.2:9440142-9440161 | None:intergenic | 30.0% | |
| AGTAGTAAAATTACTGGACA+AGG | + | chr7.2:9439719-9439738 | None:intergenic | 30.0% | |
| ATTTATTCGTAGTGATTCTC+AGG | - | chr7.2:9439287-9439306 | MS.gene020577:intron | 30.0% | |
| CAAAATGCAATAACAGTGAA+TGG | + | chr7.2:9439137-9439156 | None:intergenic | 30.0% | |
| CAAGGCTATCTAATAGAATT+AGG | + | chr7.2:9439701-9439720 | None:intergenic | 30.0% | |
| CATGTTCAGAAGCTTAATTT+AGG | + | chr7.2:9439615-9439634 | None:intergenic | 30.0% | |
| GAGATAAAAATGACTCATGT+TGG | - | chr7.2:9439311-9439330 | MS.gene020577:intron | 30.0% | |
| GTCATCAATAATTGTGTAAC+AGG | + | chr7.2:9440151-9440170 | None:intergenic | 30.0% | |
| TTGTGAACTCAAAATGTAAG+AGG | - | chr7.2:9439461-9439480 | MS.gene020577:intron | 30.0% | |
| ! | AAATGACTCATGTTGGATTT+TGG | - | chr7.2:9439318-9439337 | MS.gene020577:intron | 30.0% |
| ! | TCAAGTACCCATCATATTTT+TGG | - | chr7.2:9438908-9438927 | MS.gene020577:intron | 30.0% |
| !!! | TACATTTTGAGTTCACAAAG+AGG | + | chr7.2:9439459-9439478 | None:intergenic | 30.0% |
| !!! | TGCATTTTGATTGAACTAGT+GGG | - | chr7.2:9439148-9439167 | MS.gene020577:CDS | 30.0% |
| !!! | TTGCATTTTGATTGAACTAG+TGG | - | chr7.2:9439147-9439166 | MS.gene020577:CDS | 30.0% |
| AATGTAACTAGGTTCATGGA+TGG | + | chr7.2:9439652-9439671 | None:intergenic | 35.0% | |
| CAACAATGTAACTAGGTTCA+TGG | + | chr7.2:9439656-9439675 | None:intergenic | 35.0% | |
| GAATTTATTGCACCCTTGTT+TGG | - | chr7.2:9439180-9439199 | MS.gene020577:CDS | 35.0% | |
| GATTCATCAACTAAACCCTA+CGG | + | chr7.2:9438767-9438786 | None:intergenic | 35.0% | |
| GTAACCACAACAATGTAACT+AGG | + | chr7.2:9439663-9439682 | None:intergenic | 35.0% | |
| TGAACCTAGTTACATTGTTG+TGG | - | chr7.2:9439656-9439675 | MS.gene020577:intron | 35.0% | |
| !! | CTTTCTATTATGCTGACTCT+GGG | - | chr7.2:9439939-9439958 | MS.gene020577:intron | 35.0% |
| !!! | TAGTGAGTGGCTTTTGAAAT+CGG | - | chr7.2:9439021-9439040 | MS.gene020577:intron | 35.0% |
| ATAAATCTGATCCCTCTTCC+TGG | + | chr7.2:9439273-9439292 | None:intergenic | 40.0% | |
| ATATTATGCATCTGTCGTGC+AGG | - | chr7.2:9439759-9439778 | MS.gene020577:CDS | 40.0% | |
| CAAAGATTTACCCAGGAAGA+GGG | - | chr7.2:9439259-9439278 | MS.gene020577:intron | 40.0% | |
| CCAGAGTCAGCATAATAGAA+AGG | + | chr7.2:9439941-9439960 | None:intergenic | 40.0% | |
| GGAGAGGATAAAGAAAACCA+AGG | - | chr7.2:9440209-9440228 | MS.gene020577:intron | 40.0% | |
| TAAACCCTACGGCAACAAAA+TGG | + | chr7.2:9438756-9438775 | None:intergenic | 40.0% | |
| TAAATCTGATCCCTCTTCCT+GGG | + | chr7.2:9439272-9439291 | None:intergenic | 40.0% | |
| TCAAAGATTTACCCAGGAAG+AGG | - | chr7.2:9439258-9439277 | MS.gene020577:intron | 40.0% | |
| TTCAAGTGTAGCACCAACAA+TGG | + | chr7.2:9439845-9439864 | None:intergenic | 40.0% | |
| ! | CATCTAAGGCACAAAAGTCA+GGG | - | chr7.2:9440262-9440281 | MS.gene020577:intron | 40.0% |
| ! | TTCTCCATTTTGTTGCCGTA+GGG | - | chr7.2:9438749-9438768 | MS.gene020577:CDS | 40.0% |
| ! | TTTCTCCATTTTGTTGCCGT+AGG | - | chr7.2:9438748-9438767 | MS.gene020577:CDS | 40.0% |
| !! | CCTTTCTATTATGCTGACTC+TGG | - | chr7.2:9439938-9439957 | MS.gene020577:intron | 40.0% |
| !! | CTTGGCTTTCTTTTCATCCT+TGG | + | chr7.2:9440229-9440248 | None:intergenic | 40.0% |
| !! | GACAGAGTTCAGTTCTGAAA+TGG | + | chr7.2:9439227-9439246 | None:intergenic | 40.0% |
| !! | TTGAAGGCTTCAACTTGTTG+TGG | + | chr7.2:9439492-9439511 | None:intergenic | 40.0% |
| AAAGAAAGCCAAGAAAGCCG+AGG | - | chr7.2:9440236-9440255 | MS.gene020577:intron | 45.0% | |
| AAGGCACAAAAGTCAGGGAA+GGG | - | chr7.2:9440267-9440286 | MS.gene020577:intron | 45.0% | |
| AGGGAAGGGAAATGTTCAGA+AGG | - | chr7.2:9440281-9440300 | MS.gene020577:intron | 45.0% | |
| AGTGGCTCAAAGATTTACCC+AGG | - | chr7.2:9439252-9439271 | MS.gene020577:intron | 45.0% | |
| ATGCCCAAGGGTCCTAAAAT+GGG | - | chr7.2:9440309-9440328 | MS.gene020577:intron | 45.0% | |
| ATTTCACTGCGGGATTGACT+CGG | + | chr7.2:9440186-9440205 | None:intergenic | 45.0% | |
| CTCAAGAAGCGGTGAAGAAA+AGG | - | chr7.2:9439788-9439807 | MS.gene020577:intron | 45.0% | |
| GGGAAGGGAAATGTTCAGAA+GGG | - | chr7.2:9440282-9440301 | MS.gene020577:intron | 45.0% | |
| GTACAGAAAGCAGCACAAGA+AGG | - | chr7.2:9439531-9439550 | MS.gene020577:CDS | 45.0% | |
| TAAGGCACAAAAGTCAGGGA+AGG | - | chr7.2:9440266-9440285 | MS.gene020577:intron | 45.0% | |
| TATGCCCAAGGGTCCTAAAA+TGG | - | chr7.2:9440308-9440327 | MS.gene020577:intron | 45.0% | |
| TCAATCCCGCAGTGAAATCA+AGG | - | chr7.2:9440188-9440207 | MS.gene020577:intron | 45.0% | |
| TCCTCTCCTTGATTTCACTG+CGG | + | chr7.2:9440197-9440216 | None:intergenic | 45.0% | |
| TGAAGCCTTCAAAGCTCACA+TGG | - | chr7.2:9439500-9439519 | MS.gene020577:CDS | 45.0% | |
| TTGTGCCTTAGATGCTACCT+CGG | + | chr7.2:9440256-9440275 | None:intergenic | 45.0% | |
| ! | GCATCTAAGGCACAAAAGTC+AGG | - | chr7.2:9440261-9440280 | MS.gene020577:intron | 45.0% |
| !! | ACTGAACTCTGTCGATTCAG+TGG | - | chr7.2:9439234-9439253 | MS.gene020577:intron | 45.0% |
| !! | CTTGTGCTGCTTTCTGTACA+TGG | + | chr7.2:9439530-9439549 | None:intergenic | 45.0% |
| AGATGCTACCTCGGCTTTCT+TGG | + | chr7.2:9440247-9440266 | None:intergenic | 50.0% | |
| CCAACAATGGACCTGGAGTA+TGG | + | chr7.2:9439832-9439851 | None:intergenic | 50.0% | |
| CCATACTCCAGGTCCATTGT+TGG | - | chr7.2:9439829-9439848 | MS.gene020577:intron | 50.0% | |
| CCTCTCCTTGATTTCACTGC+GGG | + | chr7.2:9440196-9440215 | None:intergenic | 50.0% | |
| GAAAGCCGAGGTAGCATCTA+AGG | - | chr7.2:9440248-9440267 | MS.gene020577:intron | 50.0% | |
| GCAGGACATTGCTCAAGAAG+CGG | - | chr7.2:9439777-9439796 | MS.gene020577:intron | 50.0% | |
| TGTAGCACCAACAATGGACC+TGG | + | chr7.2:9439839-9439858 | None:intergenic | 50.0% | |
| ! | AGTATGGCTTCTTGGTGGCA+CGG | + | chr7.2:9439816-9439835 | None:intergenic | 50.0% |
| ! | GCAGTCCATGTGAGCTTTGA+AGG | + | chr7.2:9439508-9439527 | None:intergenic | 50.0% |
| AAGGGTCCTAAAATGGGCGG+TGG | - | chr7.2:9440315-9440334 | MS.gene020577:intron | 55.0% | |
| ATCTCGAACCTCGGGCTTCT+CGG | + | chr7.2:9439887-9439906 | None:intergenic | 55.0% | |
| CCACCAAGAAGCCATACTCC+AGG | - | chr7.2:9439818-9439837 | MS.gene020577:intron | 55.0% | |
| CCCAAGGGTCCTAAAATGGG+CGG | - | chr7.2:9440312-9440331 | MS.gene020577:intron | 55.0% | |
| CCCGCAGTGAAATCAAGGAG+AGG | - | chr7.2:9440193-9440212 | MS.gene020577:intron | 55.0% | |
| CCTAGCAGCATCTCGAACCT+CGG | + | chr7.2:9439896-9439915 | None:intergenic | 55.0% | |
| CCTGGAGTATGGCTTCTTGG+TGG | + | chr7.2:9439821-9439840 | None:intergenic | 55.0% | |
| CGAGGTTCGAGATGCTGCTA+GGG | - | chr7.2:9439894-9439913 | MS.gene020577:intron | 55.0% | |
| CTAGCAGCATCTCGAACCTC+GGG | + | chr7.2:9439895-9439914 | None:intergenic | 55.0% | |
| CTGCTAGGGAAGCTGCTCTT+CGG | - | chr7.2:9439908-9439927 | MS.gene020577:intron | 55.0% | |
| GAAAAGAACCGAGAAGCCCG+AGG | - | chr7.2:9439876-9439895 | MS.gene020577:intron | 55.0% | |
| GGACCTGGAGTATGGCTTCT+TGG | + | chr7.2:9439824-9439843 | None:intergenic | 55.0% | |
| ! | CTAAAATGGGCGGTGGTGGT+GGG | - | chr7.2:9440322-9440341 | MS.gene020577:intron | 55.0% |
| !! | CAGAAGGGTGCTATGCCCAA+GGG | - | chr7.2:9440297-9440316 | MS.gene020577:intron | 55.0% |
| !! | TCAGAAGGGTGCTATGCCCA+AGG | - | chr7.2:9440296-9440315 | MS.gene020577:intron | 55.0% |
| !!! | ACCGCCCATTTTAGGACCCT+TGG | + | chr7.2:9440316-9440335 | None:intergenic | 55.0% |
| !!! | CCGCCCATTTTAGGACCCTT+GGG | + | chr7.2:9440315-9440334 | None:intergenic | 55.0% |
| CCGAGGTTCGAGATGCTGCT+AGG | - | chr7.2:9439893-9439912 | MS.gene020577:intron | 60.0% | |
| GGTCCTAAAATGGGCGGTGG+TGG | - | chr7.2:9440318-9440337 | MS.gene020577:intron | 60.0% | |
| ! | CCACCACCACCGCCCATTTT+AGG | + | chr7.2:9440324-9440343 | None:intergenic | 60.0% |
| ! | CCTAAAATGGGCGGTGGTGG+TGG | - | chr7.2:9440321-9440340 | MS.gene020577:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 9438669 | 9440353 | 9438669 | ID=MS.gene020577 |
| chr7.2 | mRNA | 9438669 | 9440353 | 9438669 | ID=MS.gene020577.t1;Parent=MS.gene020577 |
| chr7.2 | exon | 9440343 | 9440353 | 9440343 | ID=MS.gene020577.t1.exon1;Parent=MS.gene020577.t1 |
| chr7.2 | CDS | 9440343 | 9440353 | 9440343 | ID=cds.MS.gene020577.t1;Parent=MS.gene020577.t1 |
| chr7.2 | exon | 9439714 | 9439789 | 9439714 | ID=MS.gene020577.t1.exon2;Parent=MS.gene020577.t1 |
| chr7.2 | CDS | 9439714 | 9439789 | 9439714 | ID=cds.MS.gene020577.t1;Parent=MS.gene020577.t1 |
| chr7.2 | exon | 9439470 | 9439571 | 9439470 | ID=MS.gene020577.t1.exon3;Parent=MS.gene020577.t1 |
| chr7.2 | CDS | 9439470 | 9439571 | 9439470 | ID=cds.MS.gene020577.t1;Parent=MS.gene020577.t1 |
| chr7.2 | exon | 9439093 | 9439241 | 9439093 | ID=MS.gene020577.t1.exon4;Parent=MS.gene020577.t1 |
| chr7.2 | CDS | 9439093 | 9439241 | 9439093 | ID=cds.MS.gene020577.t1;Parent=MS.gene020577.t1 |
| chr7.2 | exon | 9438669 | 9438822 | 9438669 | ID=MS.gene020577.t1.exon5;Parent=MS.gene020577.t1 |
| chr7.2 | CDS | 9438669 | 9438822 | 9438669 | ID=cds.MS.gene020577.t1;Parent=MS.gene020577.t1 |
| Gene Sequence |
| Protein sequence |
