Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007610.t1 | XP_013450065.1 | 99.4 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 2.20E-62 | 248.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007610.t1 | O65743 | 94.5 | 163 | 8 | 1 | 1 | 162 | 1 | 163 | 8.0e-61 | 234.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007610.t1 | I3SKQ8 | 99.4 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.6e-62 | 248.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene007610 | MS.gene020577 | PPI |
| MS.gene049306 | MS.gene007610 | PPI |
| MS.gene007610 | MS.gene06433 | PPI |
| MS.gene07704 | MS.gene007610 | PPI |
| MS.gene065297 | MS.gene007610 | PPI |
| MS.gene007336 | MS.gene007610 | PPI |
| MS.gene013335 | MS.gene007610 | PPI |
| MS.gene23040 | MS.gene007610 | PPI |
| MS.gene24639 | MS.gene007610 | PPI |
| MS.gene034951 | MS.gene007610 | PPI |
| MS.gene30990 | MS.gene007610 | PPI |
| MS.gene007610 | MS.gene007334 | PPI |
| MS.gene007610 | MS.gene007335 | PPI |
| MS.gene020578 | MS.gene007610 | PPI |
| MS.gene007610 | MS.gene065297 | PPI |
| MS.gene007610 | MS.gene007607 | PPI |
| MS.gene007610 | MS.gene47371 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007610.t1 | MTR_7g103320 | 99.387 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.54e-116 | 327 |
| MS.gene007610.t1 | MTR_7g103320 | 99.387 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.54e-116 | 327 |
| MS.gene007610.t1 | MTR_7g103320 | 99.387 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.54e-116 | 327 |
| MS.gene007610.t1 | MTR_1g061670 | 94.667 | 150 | 7 | 1 | 1 | 149 | 1 | 150 | 2.40e-89 | 258 |
| MS.gene007610.t1 | MTR_4g104930 | 79.630 | 54 | 10 | 1 | 43 | 96 | 13 | 65 | 2.16e-23 | 87.8 |
| MS.gene007610.t1 | MTR_4g055270 | 37.895 | 95 | 57 | 1 | 3 | 95 | 1 | 95 | 1.05e-18 | 78.6 |
| MS.gene007610.t1 | MTR_2g084925 | 35.484 | 93 | 58 | 1 | 3 | 93 | 1 | 93 | 3.11e-15 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007610.t1 | AT2G36620 | 89.172 | 157 | 16 | 1 | 1 | 156 | 1 | 157 | 1.36e-88 | 256 |
| MS.gene007610.t1 | AT3G53020 | 89.933 | 149 | 14 | 1 | 1 | 149 | 1 | 148 | 7.35e-84 | 244 |
| MS.gene007610.t1 | AT2G44860 | 37.500 | 128 | 67 | 5 | 3 | 126 | 1 | 119 | 3.26e-18 | 77.0 |
| MS.gene007610.t1 | AT2G44860 | 37.500 | 128 | 67 | 5 | 3 | 126 | 1 | 119 | 3.26e-18 | 77.0 |
Find 53 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATGCTACCTCGGCTTTCT+TGG | 0.251083 | 7.3:+10792224 | None:intergenic |
| CCTAAAATGGGCGGTGGTGG+TGG | 0.259183 | 7.3:-10792147 | MS.gene007610:CDS |
| TATGCCCAAGGGTCCTAAAA+TGG | 0.286938 | 7.3:-10792160 | MS.gene007610:CDS |
| ATCTCGAACCTCGGGCTTCT+CGG | 0.307520 | 7.3:+10792591 | None:intergenic |
| CTTGTGCTGCTTTCTGTACA+TGG | 0.329814 | 7.3:+10792948 | None:intergenic |
| GGACCTGGAGTATGGCTTCT+TGG | 0.357806 | 7.3:+10792654 | None:intergenic |
| GCAGTCCATGTGAGCTTTGA+AGG | 0.357906 | 7.3:+10792970 | None:intergenic |
| GAAAGCCGAGGTAGCATCTA+AGG | 0.361381 | 7.3:-10792220 | MS.gene007610:CDS |
| CTCAAGAAGCGGTGAAGAAA+AGG | 0.395866 | 7.3:-10792687 | MS.gene007610:CDS |
| ATAAATCTGATCCCTCTTCC+TGG | 0.395884 | 7.3:+10793201 | None:intergenic |
| GCATCTAAGGCACAAAAGTC+AGG | 0.405098 | 7.3:-10792207 | MS.gene007610:CDS |
| CCAACAATGGACCTGGAGTA+TGG | 0.414209 | 7.3:+10792646 | None:intergenic |
| ATTTATTCGTAGTGATTCTC+AGG | 0.428494 | 7.3:-10793184 | MS.gene007610:intron |
| CCTAGCAGCATCTCGAACCT+CGG | 0.438375 | 7.3:+10792582 | None:intergenic |
| GGTCCTAAAATGGGCGGTGG+TGG | 0.445895 | 7.3:-10792150 | MS.gene007610:CDS |
| TTGTGAACTCAAAATGTAAG+AGG | 0.457107 | 7.3:-10793014 | MS.gene007610:CDS |
| TCAAAGATTTACCCAGGAAG+AGG | 0.465260 | 7.3:-10793213 | MS.gene007610:CDS |
| TTGAAGGCTTCAACTTGTTG+TGG | 0.467148 | 7.3:+10792986 | None:intergenic |
| ATGCCCAAGGGTCCTAAAAT+GGG | 0.479062 | 7.3:-10792159 | MS.gene007610:CDS |
| CTGCTAGGGAAGCTGCTCTT+CGG | 0.488937 | 7.3:-10792567 | MS.gene007610:intron |
| CCATACTCCAGGTCCATTGT+TGG | 0.499932 | 7.3:-10792646 | MS.gene007610:CDS |
| TCAATCCTGCAGTGAAATCA+AGG | 0.504323 | 7.3:-10792280 | MS.gene007610:intron |
| CTAGCAGCATCTCGAACCTC+GGG | 0.515819 | 7.3:+10792583 | None:intergenic |
| CTAAAATGGGCGGTGGTGGT+GGG | 0.525722 | 7.3:-10792146 | MS.gene007610:CDS |
| CCGAGGTTCGAGATGCTGCT+AGG | 0.531808 | 7.3:-10792582 | MS.gene007610:CDS |
| CGAGGTTCGAGATGCTGCTA+GGG | 0.538000 | 7.3:-10792581 | MS.gene007610:CDS |
| CCTGGAGTATGGCTTCTTGG+TGG | 0.554085 | 7.3:+10792657 | None:intergenic |
| TAAATCTGATCCCTCTTCCT+GGG | 0.554260 | 7.3:+10793202 | None:intergenic |
| TGAAGCCTTCAAAGCTCACA+TGG | 0.563280 | 7.3:-10792975 | MS.gene007610:CDS |
| TTGTGCCTTAGATGCTACCT+CGG | 0.575585 | 7.3:+10792215 | None:intergenic |
| AGGGAAGGGAAATGTTCAGA+AGG | 0.577296 | 7.3:-10792187 | MS.gene007610:CDS |
| TTCAAGTGTAGCACCAACAA+TGG | 0.581573 | 7.3:+10792633 | None:intergenic |
| AAGGGTCCTAAAATGGGCGG+TGG | 0.584819 | 7.3:-10792153 | MS.gene007610:CDS |
| TCAGAAGGGTGCTATGCCCA+AGG | 0.589737 | 7.3:-10792172 | MS.gene007610:CDS |
| TAAGGCACAAAAGTCAGGGA+AGG | 0.594983 | 7.3:-10792202 | MS.gene007610:CDS |
| CAAAGATTTACCCAGGAAGA+GGG | 0.595056 | 7.3:-10793212 | MS.gene007610:CDS |
| ACTGAACTCTGTCGATTCAG+TGG | 0.599671 | 7.3:-10793237 | MS.gene007610:CDS |
| CCACCAAGAAGCCATACTCC+AGG | 0.600767 | 7.3:-10792657 | MS.gene007610:CDS |
| CAGAAGGGTGCTATGCCCAA+GGG | 0.602938 | 7.3:-10792171 | MS.gene007610:CDS |
| TAAAACTTACTTTAGAACCA+TGG | 0.603222 | 7.3:+10793804 | None:intergenic |
| AGTATGGCTTCTTGGTGGCA+CGG | 0.604625 | 7.3:+10792662 | None:intergenic |
| CATCTAAGGCACAAAAGTCA+GGG | 0.612277 | 7.3:-10792206 | MS.gene007610:CDS |
| TGTAGCACCAACAATGGACC+TGG | 0.616016 | 7.3:+10792639 | None:intergenic |
| AAGGCACAAAAGTCAGGGAA+GGG | 0.622311 | 7.3:-10792201 | MS.gene007610:CDS |
| AGTGGCTCAAAGATTTACCC+AGG | 0.630927 | 7.3:-10793219 | MS.gene007610:CDS |
| GAAAAGAACCGAGAAGCCCG+AGG | 0.642434 | 7.3:-10792599 | MS.gene007610:CDS |
| GCAGGACATTGCTCAAGAAG+CGG | 0.647206 | 7.3:-10792698 | MS.gene007610:intron |
| GTACAGAAAGCAGCACAAGA+AGG | 0.650232 | 7.3:-10792944 | MS.gene007610:intron |
| CCCAAGGGTCCTAAAATGGG+CGG | 0.653433 | 7.3:-10792156 | MS.gene007610:CDS |
| GGGAAGGGAAATGTTCAGAA+GGG | 0.653491 | 7.3:-10792186 | MS.gene007610:CDS |
| AAAGAAAGCCAAGAAAGCCG+AGG | 0.666450 | 7.3:-10792232 | MS.gene007610:CDS |
| GGAGAGGATAAAGAAAACCA+AGG | 0.682479 | 7.3:-10792259 | MS.gene007610:CDS |
| CCTGCAGTGAAATCAAGGAG+AGG | 0.683831 | 7.3:-10792275 | MS.gene007610:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCTTTTTTCTTTTTTT+CGG | - | chr7.3:10793448-10793467 | MS.gene007610:intron | 10.0% |
| !! | AAAGAAAAAAAAAAAAAGAG+AGG | + | chr7.3:10793430-10793449 | None:intergenic | 15.0% |
| !! | CTAAAAATTGAAATTACAAT+AGG | + | chr7.3:10792472-10792491 | None:intergenic | 15.0% |
| !!! | ATCTTAGTTTTATTGATATA+AGG | - | chr7.3:10792867-10792886 | MS.gene007610:intron | 15.0% |
| !!! | GTTTTTTTTATTGTTTTTAC+AGG | - | chr7.3:10792893-10792912 | MS.gene007610:intron | 15.0% |
| !!! | TTAATGTCTAAAAATTTGTT+TGG | - | chr7.3:10792288-10792307 | MS.gene007610:intron | 15.0% |
| !! | AAAATTGAATGTGTAAATGA+TGG | + | chr7.3:10792176-10792195 | None:intergenic | 20.0% |
| !! | AAATCAACCAAAAATATGAT+GGG | + | chr7.3:10792386-10792405 | None:intergenic | 20.0% |
| !! | TAAATCAACCAAAAATATGA+TGG | + | chr7.3:10792387-10792406 | None:intergenic | 20.0% |
| !!! | CATTTACACATTCAATTTTA+GGG | - | chr7.3:10792177-10792196 | MS.gene007610:CDS | 20.0% |
| !!! | TAATTTCAATTTTTAGTGAG+TGG | - | chr7.3:10792476-10792495 | MS.gene007610:intron | 20.0% |
| !!! | TCATTTACACATTCAATTTT+AGG | - | chr7.3:10792176-10792195 | MS.gene007610:CDS | 20.0% |
| !!! | TTGAAAATTAGACATGTTTT+TGG | - | chr7.3:10792438-10792457 | MS.gene007610:intron | 20.0% |
| ! | AAAACAGTGATGAAATTACA+TGG | + | chr7.3:10793568-10793587 | None:intergenic | 25.0% |
| ! | ACAGTAAGTAGTAAAATTAC+TGG | + | chr7.3:10793189-10793208 | None:intergenic | 25.0% |
| ! | CATATCTAATGTACTTCTAA+TGG | + | chr7.3:10792537-10792556 | None:intergenic | 25.0% |
| ! | GAGATAAAAATGATTCATGT+TGG | - | chr7.3:10792779-10792798 | MS.gene007610:intron | 25.0% |
| !! | AAATGATTCATGTTGGATTT+TGG | - | chr7.3:10792786-10792805 | MS.gene007610:intron | 25.0% |
| !! | ATTACTAACTTTTCCAAACA+AGG | + | chr7.3:10792664-10792683 | None:intergenic | 25.0% |
| !! | TTACTAACTTTTCCAAACAA+GGG | + | chr7.3:10792663-10792682 | None:intergenic | 25.0% |
| !! | TTCATTGAGAACTCTTTTTA+TGG | - | chr7.3:10793504-10793523 | MS.gene007610:intron | 25.0% |
| !!! | GTAATTTCATCACTGTTTTT+TGG | - | chr7.3:10793569-10793588 | MS.gene007610:intron | 25.0% |
| !!! | TGTGTAACTTTTAAGAATGT+TGG | - | chr7.3:10792558-10792577 | MS.gene007610:intron | 25.0% |
| AATTGTGTAACAGGAAAAAC+AGG | + | chr7.3:10793613-10793632 | None:intergenic | 30.0% | |
| AGTAGTAAAATTACTGGACA+AGG | + | chr7.3:10793183-10793202 | None:intergenic | 30.0% | |
| ATTTATTCGTAGTGATTCTC+AGG | - | chr7.3:10792755-10792774 | MS.gene007610:intron | 30.0% | |
| CAAAATGCAATAACAGTGAA+TGG | + | chr7.3:10792605-10792624 | None:intergenic | 30.0% | |
| CAAGGCTATCTAATAGAATT+AGG | + | chr7.3:10793165-10793184 | None:intergenic | 30.0% | |
| CATGTTCAGAAGCTTAATTT+AGG | + | chr7.3:10793079-10793098 | None:intergenic | 30.0% | |
| GTCATCAATAATTGTGTAAC+AGG | + | chr7.3:10793622-10793641 | None:intergenic | 30.0% | |
| TTGTGAACTCAAAATGTAAG+AGG | - | chr7.3:10792925-10792944 | MS.gene007610:intron | 30.0% | |
| ! | TCAAGTACCCATCATATTTT+TGG | - | chr7.3:10792376-10792395 | MS.gene007610:intron | 30.0% |
| !!! | TACATTTTGAGTTCACAAAG+AGG | + | chr7.3:10792923-10792942 | None:intergenic | 30.0% |
| !!! | TGCATTTTGATTGAACTAGT+GGG | - | chr7.3:10792616-10792635 | MS.gene007610:CDS | 30.0% |
| !!! | TTGCATTTTGATTGAACTAG+TGG | - | chr7.3:10792615-10792634 | MS.gene007610:CDS | 30.0% |
| AATGTAACTAGGTTCATGGA+TGG | + | chr7.3:10793116-10793135 | None:intergenic | 35.0% | |
| CAACAATGTAACTAGGTTCA+TGG | + | chr7.3:10793120-10793139 | None:intergenic | 35.0% | |
| GAATTTATTGCACCCTTGTT+TGG | - | chr7.3:10792648-10792667 | MS.gene007610:CDS | 35.0% | |
| GATTCATCAACTAAACCCTA+CGG | + | chr7.3:10792235-10792254 | None:intergenic | 35.0% | |
| GTAACCACAACAATGTAACT+AGG | + | chr7.3:10793127-10793146 | None:intergenic | 35.0% | |
| TGAACCTAGTTACATTGTTG+TGG | - | chr7.3:10793120-10793139 | MS.gene007610:intron | 35.0% | |
| !! | CTTTCTATTATGCTGACTCT+GGG | - | chr7.3:10793403-10793422 | MS.gene007610:intron | 35.0% |
| !!! | TAGTGAGTGGCTTTTGAAAT+CGG | - | chr7.3:10792489-10792508 | MS.gene007610:intron | 35.0% |
| ATAAATCTGATCCCTCTTCC+TGG | + | chr7.3:10792741-10792760 | None:intergenic | 40.0% | |
| ATATTATGCATCTGTCGTGC+AGG | - | chr7.3:10793223-10793242 | MS.gene007610:CDS | 40.0% | |
| ATTTCACTGCAGGATTGACT+CGG | + | chr7.3:10793657-10793676 | None:intergenic | 40.0% | |
| CAAAGATTTACCCAGGAAGA+GGG | - | chr7.3:10792727-10792746 | MS.gene007610:intron | 40.0% | |
| CCAGAGTCAGCATAATAGAA+AGG | + | chr7.3:10793405-10793424 | None:intergenic | 40.0% | |
| GGAGAGGATAAAGAAAACCA+AGG | - | chr7.3:10793680-10793699 | MS.gene007610:intron | 40.0% | |
| TAAACCCTACGGCAACAAAA+TGG | + | chr7.3:10792224-10792243 | None:intergenic | 40.0% | |
| TAAATCTGATCCCTCTTCCT+GGG | + | chr7.3:10792740-10792759 | None:intergenic | 40.0% | |
| TCAAAGATTTACCCAGGAAG+AGG | - | chr7.3:10792726-10792745 | MS.gene007610:intron | 40.0% | |
| TCAATCCTGCAGTGAAATCA+AGG | - | chr7.3:10793659-10793678 | MS.gene007610:intron | 40.0% | |
| TTCAAGTGTAGCACCAACAA+TGG | + | chr7.3:10793309-10793328 | None:intergenic | 40.0% | |
| ! | CATCTAAGGCACAAAAGTCA+GGG | - | chr7.3:10793733-10793752 | MS.gene007610:intron | 40.0% |
| ! | TTCTCCATTTTGTTGCCGTA+GGG | - | chr7.3:10792217-10792236 | MS.gene007610:CDS | 40.0% |
| ! | TTTCTCCATTTTGTTGCCGT+AGG | - | chr7.3:10792216-10792235 | MS.gene007610:CDS | 40.0% |
| !! | CCTTTCTATTATGCTGACTC+TGG | - | chr7.3:10793402-10793421 | MS.gene007610:intron | 40.0% |
| !! | CTTGGCTTTCTTTTCATCCT+TGG | + | chr7.3:10793700-10793719 | None:intergenic | 40.0% |
| !! | GACAGAGTTCAGTTCTGAAA+TGG | + | chr7.3:10792695-10792714 | None:intergenic | 40.0% |
| !! | TTGAAGGCTTCAACTTGTTG+TGG | + | chr7.3:10792956-10792975 | None:intergenic | 40.0% |
| AAAGAAAGCCAAGAAAGCCG+AGG | - | chr7.3:10793707-10793726 | MS.gene007610:intron | 45.0% | |
| AAGGCACAAAAGTCAGGGAA+GGG | - | chr7.3:10793738-10793757 | MS.gene007610:intron | 45.0% | |
| AGGGAAGGGAAATGTTCAGA+AGG | - | chr7.3:10793752-10793771 | MS.gene007610:intron | 45.0% | |
| AGTGGCTCAAAGATTTACCC+AGG | - | chr7.3:10792720-10792739 | MS.gene007610:intron | 45.0% | |
| ATGCCCAAGGGTCCTAAAAT+GGG | - | chr7.3:10793780-10793799 | MS.gene007610:intron | 45.0% | |
| CTCAAGAAGCGGTGAAGAAA+AGG | - | chr7.3:10793252-10793271 | MS.gene007610:intron | 45.0% | |
| GGGAAGGGAAATGTTCAGAA+GGG | - | chr7.3:10793753-10793772 | MS.gene007610:intron | 45.0% | |
| GTACAGAAAGCAGCACAAGA+AGG | - | chr7.3:10792995-10793014 | MS.gene007610:CDS | 45.0% | |
| TAAGGCACAAAAGTCAGGGA+AGG | - | chr7.3:10793737-10793756 | MS.gene007610:intron | 45.0% | |
| TATGCCCAAGGGTCCTAAAA+TGG | - | chr7.3:10793779-10793798 | MS.gene007610:intron | 45.0% | |
| TGAAGCCTTCAAAGCTCACA+TGG | - | chr7.3:10792964-10792983 | MS.gene007610:CDS | 45.0% | |
| TTGTGCCTTAGATGCTACCT+CGG | + | chr7.3:10793727-10793746 | None:intergenic | 45.0% | |
| ! | GCATCTAAGGCACAAAAGTC+AGG | - | chr7.3:10793732-10793751 | MS.gene007610:intron | 45.0% |
| !! | ACTGAACTCTGTCGATTCAG+TGG | - | chr7.3:10792702-10792721 | MS.gene007610:intron | 45.0% |
| !! | CTTGTGCTGCTTTCTGTACA+TGG | + | chr7.3:10792994-10793013 | None:intergenic | 45.0% |
| AGATGCTACCTCGGCTTTCT+TGG | + | chr7.3:10793718-10793737 | None:intergenic | 50.0% | |
| CCAACAATGGACCTGGAGTA+TGG | + | chr7.3:10793296-10793315 | None:intergenic | 50.0% | |
| CCATACTCCAGGTCCATTGT+TGG | - | chr7.3:10793293-10793312 | MS.gene007610:intron | 50.0% | |
| CCTCTCCTTGATTTCACTGC+AGG | + | chr7.3:10793667-10793686 | None:intergenic | 50.0% | |
| CCTGCAGTGAAATCAAGGAG+AGG | - | chr7.3:10793664-10793683 | MS.gene007610:intron | 50.0% | |
| GAAAGCCGAGGTAGCATCTA+AGG | - | chr7.3:10793719-10793738 | MS.gene007610:intron | 50.0% | |
| GCAGGACATTGCTCAAGAAG+CGG | - | chr7.3:10793241-10793260 | MS.gene007610:CDS | 50.0% | |
| TGTAGCACCAACAATGGACC+TGG | + | chr7.3:10793303-10793322 | None:intergenic | 50.0% | |
| ! | AGTATGGCTTCTTGGTGGCA+CGG | + | chr7.3:10793280-10793299 | None:intergenic | 50.0% |
| ! | GCAGTCCATGTGAGCTTTGA+AGG | + | chr7.3:10792972-10792991 | None:intergenic | 50.0% |
| AAGGGTCCTAAAATGGGCGG+TGG | - | chr7.3:10793786-10793805 | MS.gene007610:intron | 55.0% | |
| ATCTCGAACCTCGGGCTTCT+CGG | + | chr7.3:10793351-10793370 | None:intergenic | 55.0% | |
| CCACCAAGAAGCCATACTCC+AGG | - | chr7.3:10793282-10793301 | MS.gene007610:intron | 55.0% | |
| CCCAAGGGTCCTAAAATGGG+CGG | - | chr7.3:10793783-10793802 | MS.gene007610:intron | 55.0% | |
| CCTAGCAGCATCTCGAACCT+CGG | + | chr7.3:10793360-10793379 | None:intergenic | 55.0% | |
| CCTGGAGTATGGCTTCTTGG+TGG | + | chr7.3:10793285-10793304 | None:intergenic | 55.0% | |
| CGAGGTTCGAGATGCTGCTA+GGG | - | chr7.3:10793358-10793377 | MS.gene007610:intron | 55.0% | |
| CTAGCAGCATCTCGAACCTC+GGG | + | chr7.3:10793359-10793378 | None:intergenic | 55.0% | |
| CTGCTAGGGAAGCTGCTCTT+CGG | - | chr7.3:10793372-10793391 | MS.gene007610:intron | 55.0% | |
| GAAAAGAACCGAGAAGCCCG+AGG | - | chr7.3:10793340-10793359 | MS.gene007610:intron | 55.0% | |
| GGACCTGGAGTATGGCTTCT+TGG | + | chr7.3:10793288-10793307 | None:intergenic | 55.0% | |
| ! | CTAAAATGGGCGGTGGTGGT+GGG | - | chr7.3:10793793-10793812 | MS.gene007610:intron | 55.0% |
| !! | CAGAAGGGTGCTATGCCCAA+GGG | - | chr7.3:10793768-10793787 | MS.gene007610:intron | 55.0% |
| !! | TCAGAAGGGTGCTATGCCCA+AGG | - | chr7.3:10793767-10793786 | MS.gene007610:intron | 55.0% |
| !!! | ACCGCCCATTTTAGGACCCT+TGG | + | chr7.3:10793787-10793806 | None:intergenic | 55.0% |
| !!! | CCGCCCATTTTAGGACCCTT+GGG | + | chr7.3:10793786-10793805 | None:intergenic | 55.0% |
| CCGAGGTTCGAGATGCTGCT+AGG | - | chr7.3:10793357-10793376 | MS.gene007610:intron | 60.0% | |
| GGTCCTAAAATGGGCGGTGG+TGG | - | chr7.3:10793789-10793808 | MS.gene007610:intron | 60.0% | |
| ! | CCACCACCACCGCCCATTTT+AGG | + | chr7.3:10793795-10793814 | None:intergenic | 60.0% |
| ! | CCTAAAATGGGCGGTGGTGG+TGG | - | chr7.3:10793792-10793811 | MS.gene007610:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 10792137 | 10793824 | 10792137 | ID=MS.gene007610 |
| chr7.3 | mRNA | 10792137 | 10793824 | 10792137 | ID=MS.gene007610.t1;Parent=MS.gene007610 |
| chr7.3 | exon | 10793814 | 10793824 | 10793814 | ID=MS.gene007610.t1.exon1;Parent=MS.gene007610.t1 |
| chr7.3 | CDS | 10793814 | 10793824 | 10793814 | ID=cds.MS.gene007610.t1;Parent=MS.gene007610.t1 |
| chr7.3 | exon | 10793185 | 10793260 | 10793185 | ID=MS.gene007610.t1.exon2;Parent=MS.gene007610.t1 |
| chr7.3 | CDS | 10793185 | 10793260 | 10793185 | ID=cds.MS.gene007610.t1;Parent=MS.gene007610.t1 |
| chr7.3 | exon | 10792945 | 10793046 | 10792945 | ID=MS.gene007610.t1.exon3;Parent=MS.gene007610.t1 |
| chr7.3 | CDS | 10792945 | 10793046 | 10792945 | ID=cds.MS.gene007610.t1;Parent=MS.gene007610.t1 |
| chr7.3 | exon | 10792568 | 10792716 | 10792568 | ID=MS.gene007610.t1.exon4;Parent=MS.gene007610.t1 |
| chr7.3 | CDS | 10792568 | 10792716 | 10792568 | ID=cds.MS.gene007610.t1;Parent=MS.gene007610.t1 |
| chr7.3 | exon | 10792137 | 10792290 | 10792137 | ID=MS.gene007610.t1.exon5;Parent=MS.gene007610.t1 |
| chr7.3 | CDS | 10792137 | 10792290 | 10792137 | ID=cds.MS.gene007610.t1;Parent=MS.gene007610.t1 |
| Gene Sequence |
| Protein sequence |
