Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007607.t1 | XP_013450065.1 | 100 | 163 | 0 | 0 | 1 | 163 | 1 | 163 | 1.00E-62 | 249.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007607.t1 | O65743 | 95.1 | 163 | 7 | 1 | 1 | 162 | 1 | 163 | 3.6e-61 | 235.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007607.t1 | I3SKQ8 | 100.0 | 163 | 0 | 0 | 1 | 163 | 1 | 163 | 7.2e-63 | 249.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene049306 | MS.gene007607 | PPI |
| MS.gene007607 | MS.gene007334 | PPI |
| MS.gene07704 | MS.gene007607 | PPI |
| MS.gene007336 | MS.gene007607 | PPI |
| MS.gene007607 | MS.gene47371 | PPI |
| MS.gene065297 | MS.gene007607 | PPI |
| MS.gene020577 | MS.gene007607 | PPI |
| MS.gene007335 | MS.gene007607 | PPI |
| MS.gene013335 | MS.gene007607 | PPI |
| MS.gene23040 | MS.gene007607 | PPI |
| MS.gene24639 | MS.gene007607 | PPI |
| MS.gene020578 | MS.gene007607 | PPI |
| MS.gene034951 | MS.gene007607 | PPI |
| MS.gene06433 | MS.gene007607 | PPI |
| MS.gene30990 | MS.gene007607 | PPI |
| MS.gene007607 | MS.gene007335 | PPI |
| MS.gene007610 | MS.gene007607 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007607.t1 | MTR_7g103320 | 100.000 | 163 | 0 | 0 | 1 | 163 | 1 | 163 | 5.20e-117 | 328 |
| MS.gene007607.t1 | MTR_7g103320 | 100.000 | 163 | 0 | 0 | 1 | 163 | 1 | 163 | 5.20e-117 | 328 |
| MS.gene007607.t1 | MTR_7g103320 | 100.000 | 163 | 0 | 0 | 1 | 163 | 1 | 163 | 5.20e-117 | 328 |
| MS.gene007607.t1 | MTR_1g061670 | 95.333 | 150 | 6 | 1 | 1 | 149 | 1 | 150 | 7.69e-90 | 259 |
| MS.gene007607.t1 | MTR_4g104930 | 79.630 | 54 | 10 | 1 | 43 | 96 | 13 | 65 | 2.18e-23 | 87.8 |
| MS.gene007607.t1 | MTR_4g055270 | 36.842 | 95 | 58 | 1 | 3 | 95 | 1 | 95 | 2.81e-18 | 77.4 |
| MS.gene007607.t1 | MTR_2g084925 | 34.409 | 93 | 59 | 1 | 3 | 93 | 1 | 93 | 8.49e-15 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007607.t1 | AT2G36620 | 89.172 | 157 | 16 | 1 | 1 | 156 | 1 | 157 | 1.94e-88 | 255 |
| MS.gene007607.t1 | AT3G53020 | 89.933 | 149 | 14 | 1 | 1 | 149 | 1 | 148 | 1.08e-83 | 243 |
| MS.gene007607.t1 | AT2G44860 | 36.719 | 128 | 68 | 5 | 3 | 126 | 1 | 119 | 8.77e-18 | 75.9 |
| MS.gene007607.t1 | AT2G44860 | 36.719 | 128 | 68 | 5 | 3 | 126 | 1 | 119 | 8.77e-18 | 75.9 |
Find 50 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATGCTACTTCGGCTTTCT+TGG | 0.236901 | 7.1:-9843554 | None:intergenic |
| CCTAAAATGGGCGGTGGTGG+TGG | 0.259183 | 7.1:+9843631 | MS.gene007607:CDS |
| TATGCCCAAGGGTCCTAAAA+TGG | 0.286938 | 7.1:+9843618 | MS.gene007607:CDS |
| CTTGGCTTTCTTCTCATCCT+TGG | 0.290844 | 7.1:-9843536 | None:intergenic |
| ATCTCGAACCTCGGGCTTCT+CGG | 0.307520 | 7.1:-9843263 | None:intergenic |
| CTTGTGCTGCTTTCTGTACA+TGG | 0.329814 | 7.1:-9842906 | None:intergenic |
| GGACCTGGAGTATGGCTTCT+TGG | 0.357806 | 7.1:-9843200 | None:intergenic |
| GAAAGCCGAAGTAGCATCTA+AGG | 0.360444 | 7.1:+9843558 | MS.gene007607:CDS |
| ATAAATCTGATCCCTCTTCC+TGG | 0.395884 | 7.1:-9842653 | None:intergenic |
| GCAGTCCATGTAAGCTTTGA+AGG | 0.396337 | 7.1:-9842884 | None:intergenic |
| GCATCTAAGGCACAAAAGTC+AGG | 0.405098 | 7.1:+9843571 | MS.gene007607:CDS |
| CCAACAATGGACCTGGAGTA+TGG | 0.414209 | 7.1:-9843208 | None:intergenic |
| ATTTATTCGTAGTGATTCTC+AGG | 0.428494 | 7.1:+9842670 | MS.gene007607:CDS |
| CCTAGCAGCATCTCGAACCT+CGG | 0.438375 | 7.1:-9843272 | None:intergenic |
| GGTCCTAAAATGGGCGGTGG+TGG | 0.445895 | 7.1:+9843628 | MS.gene007607:CDS |
| TTGTGAACTCAAAATGTAAG+AGG | 0.457107 | 7.1:+9842840 | MS.gene007607:CDS |
| TTGAAGGCTTCAACTTGTTG+TGG | 0.467148 | 7.1:-9842868 | None:intergenic |
| TGAAGCCTTCAAAGCTTACA+TGG | 0.470130 | 7.1:+9842879 | MS.gene007607:CDS |
| GCAAAGATTTACCCAGGAAG+AGG | 0.473275 | 7.1:+9842641 | MS.gene007607:CDS |
| ATGCCCAAGGGTCCTAAAAT+GGG | 0.479062 | 7.1:+9843619 | MS.gene007607:CDS |
| CTGCTAGGGAAGCTGCTCTT+CGG | 0.488937 | 7.1:+9843287 | MS.gene007607:CDS |
| CCATACTCCAGGTCCATTGT+TGG | 0.499932 | 7.1:+9843208 | MS.gene007607:CDS |
| TCAATCCCGCAGTGAAATCA+AGG | 0.506619 | 7.1:+9843498 | MS.gene007607:intron |
| CTAGCAGCATCTCGAACCTC+GGG | 0.515819 | 7.1:-9843271 | None:intergenic |
| CTAAAATGGGCGGTGGTGGT+GGG | 0.525722 | 7.1:+9843632 | MS.gene007607:CDS |
| CTCAAGAAGCTGTGAAGAAG+AGG | 0.530274 | 7.1:+9843167 | MS.gene007607:CDS |
| CCGAGGTTCGAGATGCTGCT+AGG | 0.531808 | 7.1:+9843272 | MS.gene007607:CDS |
| CGAGGTTCGAGATGCTGCTA+GGG | 0.538000 | 7.1:+9843273 | MS.gene007607:CDS |
| TTGTGCCTTAGATGCTACTT+CGG | 0.538791 | 7.1:-9843563 | None:intergenic |
| AGGGAAAGGCAATGTTCAGA+AGG | 0.551183 | 7.1:+9843591 | MS.gene007607:CDS |
| CCTGGAGTATGGCTTCTTGG+TGG | 0.554085 | 7.1:-9843197 | None:intergenic |
| TAAATCTGATCCCTCTTCCT+GGG | 0.554260 | 7.1:-9842652 | None:intergenic |
| TTCAAGTGTAGCACCAACAA+TGG | 0.581573 | 7.1:-9843221 | None:intergenic |
| AAGGGTCCTAAAATGGGCGG+TGG | 0.584819 | 7.1:+9843625 | MS.gene007607:CDS |
| TCAGAAGGGTGCTATGCCCA+AGG | 0.589737 | 7.1:+9843606 | MS.gene007607:CDS |
| CAAAGATTTACCCAGGAAGA+GGG | 0.595056 | 7.1:+9842642 | MS.gene007607:CDS |
| ACTGAACTCTGTCGATTCAG+TGG | 0.599671 | 7.1:+9842617 | MS.gene007607:CDS |
| CCACCAAGAAGCCATACTCC+AGG | 0.600767 | 7.1:+9843197 | MS.gene007607:CDS |
| AAGGCACAAAAGTCAGGGAA+AGG | 0.600921 | 7.1:+9843577 | MS.gene007607:CDS |
| CAGAAGGGTGCTATGCCCAA+GGG | 0.602938 | 7.1:+9843607 | MS.gene007607:CDS |
| AGTATGGCTTCTTGGTGGCA+CGG | 0.604625 | 7.1:-9843192 | None:intergenic |
| CATCTAAGGCACAAAAGTCA+GGG | 0.612277 | 7.1:+9843572 | MS.gene007607:CDS |
| TGTAGCACCAACAATGGACC+TGG | 0.616016 | 7.1:-9843215 | None:intergenic |
| GAAAAGAACCGAGAAGCCCG+AGG | 0.642434 | 7.1:+9843255 | MS.gene007607:CDS |
| AGTGGCGCAAAGATTTACCC+AGG | 0.643624 | 7.1:+9842635 | MS.gene007607:CDS |
| GTACAGAAAGCAGCACAAGA+AGG | 0.650232 | 7.1:+9842910 | MS.gene007607:CDS |
| CCCAAGGGTCCTAAAATGGG+CGG | 0.653433 | 7.1:+9843622 | MS.gene007607:CDS |
| GGGAAAGGCAATGTTCAGAA+GGG | 0.656870 | 7.1:+9843592 | MS.gene007607:CDS |
| CCCGCAGTGAAATCAAGGAG+AGG | 0.678239 | 7.1:+9843503 | MS.gene007607:intron |
| GGAGAGGATAAAGAAAACCA+AGG | 0.682479 | 7.1:+9843519 | MS.gene007607:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCTTAGTTTTATTGATATA+AGG | + | chr7.1:9842782-9842801 | MS.gene007607:intron | 15.0% |
| !!! | GTTTTTTTTATTGTTTTTAC+AGG | + | chr7.1:9842808-9842827 | MS.gene007607:intron | 15.0% |
| !! | TTAAAAATTGAAATTGCACA+AGG | - | chr7.1:9842443-9842462 | None:intergenic | 20.0% |
| !! | TTTGATGGAATGTAAAATTT+CGG | + | chr7.1:9842192-9842211 | MS.gene007607:intron | 20.0% |
| !!! | AGATTTAGTTTTATTGTACT+TGG | + | chr7.1:9842166-9842185 | MS.gene007607:intron | 20.0% |
| !!! | CAAAATTCTAAAAATCTGTT+TGG | + | chr7.1:9842263-9842282 | MS.gene007607:intron | 20.0% |
| !!! | CAATTTCAATTTTTAATGAG+TGG | + | chr7.1:9842447-9842466 | MS.gene007607:intron | 20.0% |
| !!! | GATTTAGTTTTATTGTACTT+GGG | + | chr7.1:9842167-9842186 | MS.gene007607:intron | 20.0% |
| !!! | TGGAAATTTAGATTTGTTTT+TGG | + | chr7.1:9842408-9842427 | MS.gene007607:intron | 20.0% |
| !!! | TGTATTTTGATTGAATTAGT+GGG | + | chr7.1:9842530-9842549 | MS.gene007607:intron | 20.0% |
| !!! | TTGTATTTTGATTGAATTAG+TGG | + | chr7.1:9842529-9842548 | MS.gene007607:intron | 20.0% |
| ! | AAAACTGAATGTGTAAATGA+TGG | - | chr7.1:9842086-9842105 | None:intergenic | 25.0% |
| ! | AAATCAACCAAAGCTATAAT+GGG | - | chr7.1:9842355-9842374 | None:intergenic | 25.0% |
| ! | AGTAGTAAAATTACTAGACA+AGG | - | chr7.1:9843098-9843117 | None:intergenic | 25.0% |
| ! | ATAATCATAGAACACTGTTT+CGG | - | chr7.1:9842228-9842247 | None:intergenic | 25.0% |
| ! | CAAAATACAATAACAGTGAA+TGG | - | chr7.1:9842519-9842538 | None:intergenic | 25.0% |
| ! | GATTCATCAACTAAACATTA+CGG | - | chr7.1:9842145-9842164 | None:intergenic | 25.0% |
| ! | TAAATCAACCAAAGCTATAA+TGG | - | chr7.1:9842356-9842375 | None:intergenic | 25.0% |
| !! | CATTTACACATTCAGTTTTA+GGG | + | chr7.1:9842087-9842106 | MS.gene007607:intron | 25.0% |
| !! | TCATTTACACATTCAGTTTT+AGG | + | chr7.1:9842086-9842105 | MS.gene007607:intron | 25.0% |
| !! | TTTGCAATTTTTGATGCTAT+TGG | + | chr7.1:9842388-9842407 | MS.gene007607:intron | 25.0% |
| !!! | AAGCTTAATTTAGCTTTACA+CGG | - | chr7.1:9842985-9843004 | None:intergenic | 25.0% |
| AAAGAGTCGGCATAATAAAA+AGG | - | chr7.1:9843320-9843339 | None:intergenic | 30.0% | |
| ATTTATTCGTAGTGATTCTC+AGG | + | chr7.1:9842670-9842689 | MS.gene007607:CDS | 30.0% | |
| CAGTGTTCTATGATTATTGT+AGG | + | chr7.1:9842231-9842250 | MS.gene007607:intron | 30.0% | |
| GAGATAAAAATGACTCATGT+TGG | + | chr7.1:9842694-9842713 | MS.gene007607:intron | 30.0% | |
| TATTGTACTTGGGAATTTGA+TGG | + | chr7.1:9842177-9842196 | MS.gene007607:intron | 30.0% | |
| TTGTGAACTCAAAATGTAAG+AGG | + | chr7.1:9842840-9842859 | MS.gene007607:CDS | 30.0% | |
| ! | TACTAACTTTTCCACACAAA+GGG | - | chr7.1:9842577-9842596 | None:intergenic | 30.0% |
| ! | TTACTAACTTTTCCACACAA+AGG | - | chr7.1:9842578-9842597 | None:intergenic | 30.0% |
| !!! | AAATGACTCATGTTGGTTTT+TGG | + | chr7.1:9842701-9842720 | MS.gene007607:intron | 30.0% |
| !!! | TACATTTTGAGTTCACAAAG+AGG | - | chr7.1:9842838-9842857 | None:intergenic | 30.0% |
| AAAAAGAGGTCTCAAAGAGT+CGG | - | chr7.1:9843333-9843352 | None:intergenic | 35.0% | |
| AATGTAACTAGGTTCATGGA+TGG | - | chr7.1:9843031-9843050 | None:intergenic | 35.0% | |
| ATATTATGCATCTGTTGTGC+AGG | + | chr7.1:9843138-9843157 | MS.gene007607:intron | 35.0% | |
| CAACAATGTAACTAGGTTCA+TGG | - | chr7.1:9843035-9843054 | None:intergenic | 35.0% | |
| CAAGGCTATCTCATAGAATT+AGG | - | chr7.1:9843080-9843099 | None:intergenic | 35.0% | |
| GTAACCACAACAATGTAACT+AGG | - | chr7.1:9843042-9843061 | None:intergenic | 35.0% | |
| TCAAGTACCCATTATAGCTT+TGG | + | chr7.1:9842345-9842364 | MS.gene007607:intron | 35.0% | |
| TGAACCTAGTTACATTGTTG+TGG | + | chr7.1:9843035-9843054 | MS.gene007607:intron | 35.0% | |
| AATTTATTGCGCCCTTTGTG+TGG | + | chr7.1:9842563-9842582 | MS.gene007607:intron | 40.0% | |
| ATAAATCTGATCCCTCTTCC+TGG | - | chr7.1:9842656-9842675 | None:intergenic | 40.0% | |
| CAAAGATTTACCCAGGAAGA+GGG | + | chr7.1:9842642-9842661 | MS.gene007607:CDS | 40.0% | |
| GGAGAGGATAAAGAAAACCA+AGG | + | chr7.1:9843519-9843538 | MS.gene007607:CDS | 40.0% | |
| TAAATCTGATCCCTCTTCCT+GGG | - | chr7.1:9842655-9842674 | None:intergenic | 40.0% | |
| TGAAGCCTTCAAAGCTTACA+TGG | + | chr7.1:9842879-9842898 | MS.gene007607:CDS | 40.0% | |
| TTCAAGTGTAGCACCAACAA+TGG | - | chr7.1:9843224-9843243 | None:intergenic | 40.0% | |
| ! | CATCTAAGGCACAAAAGTCA+GGG | + | chr7.1:9843572-9843591 | MS.gene007607:CDS | 40.0% |
| ! | TTGTGCCTTAGATGCTACTT+CGG | - | chr7.1:9843566-9843585 | None:intergenic | 40.0% |
| !! | GACAGAGTTCAGTTCTGAAA+TGG | - | chr7.1:9842610-9842629 | None:intergenic | 40.0% |
| !! | TTGAAGGCTTCAACTTGTTG+TGG | - | chr7.1:9842871-9842890 | None:intergenic | 40.0% |
| AAGGCACAAAAGTCAGGGAA+AGG | + | chr7.1:9843577-9843596 | MS.gene007607:CDS | 45.0% | |
| AGGGAAAGGCAATGTTCAGA+AGG | + | chr7.1:9843591-9843610 | MS.gene007607:CDS | 45.0% | |
| ATGCCCAAGGGTCCTAAAAT+GGG | + | chr7.1:9843619-9843638 | MS.gene007607:CDS | 45.0% | |
| ATTTCACTGCGGGATTGACT+CGG | - | chr7.1:9843496-9843515 | None:intergenic | 45.0% | |
| CTCAAGAAGCTGTGAAGAAG+AGG | + | chr7.1:9843167-9843186 | MS.gene007607:CDS | 45.0% | |
| GAAAGCCGAAGTAGCATCTA+AGG | + | chr7.1:9843558-9843577 | MS.gene007607:CDS | 45.0% | |
| GCAAAGATTTACCCAGGAAG+AGG | + | chr7.1:9842641-9842660 | MS.gene007607:CDS | 45.0% | |
| GGGAAAGGCAATGTTCAGAA+GGG | + | chr7.1:9843592-9843611 | MS.gene007607:CDS | 45.0% | |
| GTACAGAAAGCAGCACAAGA+AGG | + | chr7.1:9842910-9842929 | MS.gene007607:CDS | 45.0% | |
| TATGCCCAAGGGTCCTAAAA+TGG | + | chr7.1:9843618-9843637 | MS.gene007607:CDS | 45.0% | |
| TCAATCCCGCAGTGAAATCA+AGG | + | chr7.1:9843498-9843517 | MS.gene007607:intron | 45.0% | |
| TCCTCTCCTTGATTTCACTG+CGG | - | chr7.1:9843507-9843526 | None:intergenic | 45.0% | |
| ! | AGATGCTACTTCGGCTTTCT+TGG | - | chr7.1:9843557-9843576 | None:intergenic | 45.0% |
| ! | CTTGGCTTTCTTCTCATCCT+TGG | - | chr7.1:9843539-9843558 | None:intergenic | 45.0% |
| ! | GCAGTCCATGTAAGCTTTGA+AGG | - | chr7.1:9842887-9842906 | None:intergenic | 45.0% |
| ! | GCATCTAAGGCACAAAAGTC+AGG | + | chr7.1:9843571-9843590 | MS.gene007607:CDS | 45.0% |
| !! | ACTGAACTCTGTCGATTCAG+TGG | + | chr7.1:9842617-9842636 | MS.gene007607:CDS | 45.0% |
| !! | CTTGTGCTGCTTTCTGTACA+TGG | - | chr7.1:9842909-9842928 | None:intergenic | 45.0% |
| !! | AAAAAAAAAAAAAAAAAAAG+AGG | - | chr7.1:9843347-9843366 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTCA+TGG | + | chr7.1:9843350-9843369 | MS.gene007607:intron | 5.0% |
| AGTGGCGCAAAGATTTACCC+AGG | + | chr7.1:9842635-9842654 | MS.gene007607:CDS | 50.0% | |
| CCAACAATGGACCTGGAGTA+TGG | - | chr7.1:9843211-9843230 | None:intergenic | 50.0% | |
| CCATACTCCAGGTCCATTGT+TGG | + | chr7.1:9843208-9843227 | MS.gene007607:CDS | 50.0% | |
| CCTCTCCTTGATTTCACTGC+GGG | - | chr7.1:9843506-9843525 | None:intergenic | 50.0% | |
| TGTAGCACCAACAATGGACC+TGG | - | chr7.1:9843218-9843237 | None:intergenic | 50.0% | |
| ! | AGTATGGCTTCTTGGTGGCA+CGG | - | chr7.1:9843195-9843214 | None:intergenic | 50.0% |
| AAGGGTCCTAAAATGGGCGG+TGG | + | chr7.1:9843625-9843644 | MS.gene007607:CDS | 55.0% | |
| ATCTCGAACCTCGGGCTTCT+CGG | - | chr7.1:9843266-9843285 | None:intergenic | 55.0% | |
| CCACCAAGAAGCCATACTCC+AGG | + | chr7.1:9843197-9843216 | MS.gene007607:CDS | 55.0% | |
| CCCAAGGGTCCTAAAATGGG+CGG | + | chr7.1:9843622-9843641 | MS.gene007607:CDS | 55.0% | |
| CCCGCAGTGAAATCAAGGAG+AGG | + | chr7.1:9843503-9843522 | MS.gene007607:intron | 55.0% | |
| CCTAGCAGCATCTCGAACCT+CGG | - | chr7.1:9843275-9843294 | None:intergenic | 55.0% | |
| CCTGGAGTATGGCTTCTTGG+TGG | - | chr7.1:9843200-9843219 | None:intergenic | 55.0% | |
| CGAGGTTCGAGATGCTGCTA+GGG | + | chr7.1:9843273-9843292 | MS.gene007607:CDS | 55.0% | |
| CTAGCAGCATCTCGAACCTC+GGG | - | chr7.1:9843274-9843293 | None:intergenic | 55.0% | |
| CTGCTAGGGAAGCTGCTCTT+CGG | + | chr7.1:9843287-9843306 | MS.gene007607:CDS | 55.0% | |
| GAAAAGAACCGAGAAGCCCG+AGG | + | chr7.1:9843255-9843274 | MS.gene007607:CDS | 55.0% | |
| GGACCTGGAGTATGGCTTCT+TGG | - | chr7.1:9843203-9843222 | None:intergenic | 55.0% | |
| ! | CTAAAATGGGCGGTGGTGGT+GGG | + | chr7.1:9843632-9843651 | MS.gene007607:CDS | 55.0% |
| !! | CAGAAGGGTGCTATGCCCAA+GGG | + | chr7.1:9843607-9843626 | MS.gene007607:CDS | 55.0% |
| !! | TCAGAAGGGTGCTATGCCCA+AGG | + | chr7.1:9843606-9843625 | MS.gene007607:CDS | 55.0% |
| !!! | ACCGCCCATTTTAGGACCCT+TGG | - | chr7.1:9843626-9843645 | None:intergenic | 55.0% |
| !!! | CCGCCCATTTTAGGACCCTT+GGG | - | chr7.1:9843625-9843644 | None:intergenic | 55.0% |
| CCGAGGTTCGAGATGCTGCT+AGG | + | chr7.1:9843272-9843291 | MS.gene007607:CDS | 60.0% | |
| GGTCCTAAAATGGGCGGTGG+TGG | + | chr7.1:9843628-9843647 | MS.gene007607:CDS | 60.0% | |
| ! | CCACCACCACCGCCCATTTT+AGG | - | chr7.1:9843634-9843653 | None:intergenic | 60.0% |
| ! | CCTAAAATGGGCGGTGGTGG+TGG | + | chr7.1:9843631-9843650 | MS.gene007607:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 9842047 | 9843663 | 9842047 | ID=MS.gene007607 |
| chr7.1 | mRNA | 9842047 | 9843663 | 9842047 | ID=MS.gene007607.t1;Parent=MS.gene007607 |
| chr7.1 | exon | 9842047 | 9842057 | 9842047 | ID=MS.gene007607.t1.exon1;Parent=MS.gene007607.t1 |
| chr7.1 | CDS | 9842047 | 9842057 | 9842047 | ID=cds.MS.gene007607.t1;Parent=MS.gene007607.t1 |
| chr7.1 | exon | 9842616 | 9842691 | 9842616 | ID=MS.gene007607.t1.exon2;Parent=MS.gene007607.t1 |
| chr7.1 | CDS | 9842616 | 9842691 | 9842616 | ID=cds.MS.gene007607.t1;Parent=MS.gene007607.t1 |
| chr7.1 | exon | 9842830 | 9842931 | 9842830 | ID=MS.gene007607.t1.exon3;Parent=MS.gene007607.t1 |
| chr7.1 | CDS | 9842830 | 9842931 | 9842830 | ID=cds.MS.gene007607.t1;Parent=MS.gene007607.t1 |
| chr7.1 | exon | 9843160 | 9843308 | 9843160 | ID=MS.gene007607.t1.exon4;Parent=MS.gene007607.t1 |
| chr7.1 | CDS | 9843160 | 9843308 | 9843160 | ID=cds.MS.gene007607.t1;Parent=MS.gene007607.t1 |
| chr7.1 | exon | 9843510 | 9843663 | 9843510 | ID=MS.gene007607.t1.exon5;Parent=MS.gene007607.t1 |
| chr7.1 | CDS | 9843510 | 9843663 | 9843510 | ID=cds.MS.gene007607.t1;Parent=MS.gene007607.t1 |
| Gene Sequence |
| Protein sequence |
