Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012783.t1 | XP_013458703.1 | 96.2 | 551 | 15 | 3 | 1 | 551 | 1 | 545 | 9.50E-291 | 1008.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012783.t1 | A7HYV8 | 38.8 | 479 | 263 | 10 | 41 | 512 | 5 | 460 | 1.6e-81 | 305.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012783.t1 | A0A072V3J6 | 96.2 | 551 | 15 | 3 | 1 | 551 | 1 | 545 | 6.8e-291 | 1008.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene012783 | MS.gene81620 | PPI |
| MS.gene012783 | MS.gene016758 | PPI |
| MS.gene070509 | MS.gene012783 | PPI |
| MS.gene012783 | MS.gene070511 | PPI |
| MS.gene012783 | MS.gene070507 | PPI |
| MS.gene012783 | MS.gene057884 | PPI |
| MS.gene012783 | MS.gene057883 | PPI |
| MS.gene012783 | MS.gene070492 | PPI |
| MS.gene012783 | MS.gene070510 | PPI |
| MS.gene070505 | MS.gene012783 | PPI |
| MS.gene057886 | MS.gene012783 | PPI |
| MS.gene81615 | MS.gene012783 | PPI |
| MS.gene012783 | MS.gene67840 | PPI |
| MS.gene012783 | MS.gene81617 | PPI |
| MS.gene81622 | MS.gene012783 | PPI |
| MS.gene016743 | MS.gene012783 | PPI |
| MS.gene012783 | MS.gene37911 | PPI |
| MS.gene012783 | MS.gene070503 | PPI |
| MS.gene016742 | MS.gene012783 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012783.t1 | MTR_4g134500 | 96.189 | 551 | 15 | 3 | 1 | 551 | 1 | 545 | 0.0 | 1068 |
| MS.gene012783.t1 | MTR_4g065030 | 31.627 | 547 | 295 | 15 | 22 | 528 | 119 | 626 | 5.23e-62 | 216 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012783.t1 | AT5G39960 | 70.155 | 516 | 147 | 3 | 28 | 541 | 107 | 617 | 0.0 | 729 |
| MS.gene012783.t1 | AT3G12080 | 31.061 | 528 | 294 | 16 | 38 | 530 | 158 | 650 | 9.67e-55 | 196 |
| MS.gene012783.t1 | AT3G12080 | 30.649 | 447 | 242 | 15 | 38 | 451 | 158 | 569 | 1.14e-39 | 152 |
Find 138 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTGCCAGAGTGGCTTTA+AGG | 0.168813 | 8.1:+336640 | MS.gene012783:CDS |
| TCACCTGCGTTTCAGAGTTT+TGG | 0.258946 | 8.1:+332348 | MS.gene012783:CDS |
| GAACGCTGCATGATCCTTAT+AGG | 0.273393 | 8.1:-336573 | None:intergenic |
| TTGGAAGCTGAAGCCACTTC+TGG | 0.280926 | 8.1:+332382 | MS.gene012783:CDS |
| CTTGAAAGATGACTTTGATT+TGG | 0.289666 | 8.1:+336542 | MS.gene012783:CDS |
| TCAAGGAAGAACTATTTATC+TGG | 0.295908 | 8.1:+333056 | MS.gene012783:CDS |
| CTAATGAAATGTCCCGTTTA+GGG | 0.297260 | 8.1:+332620 | MS.gene012783:CDS |
| GTGAGGAAGAGTAAGGAATT+AGG | 0.310025 | 8.1:-332457 | None:intergenic |
| GCTAATGAAATGTCCCGTTT+AGG | 0.315515 | 8.1:+332619 | MS.gene012783:CDS |
| GAATCACTCTTTGATGTTGA+TGG | 0.322033 | 8.1:+332580 | MS.gene012783:CDS |
| TGAACAAGATGGATCTTCTA+AGG | 0.322228 | 8.1:+335775 | MS.gene012783:CDS |
| CTCCCCACCGTCATCATTCT+CGG | 0.325989 | 8.1:+332202 | MS.gene012783:CDS |
| TTGATCAGGAAGTTGGAAAA+TGG | 0.328408 | 8.1:+332506 | MS.gene012783:CDS |
| ATTTGGGTGGAATTCCTATA+AGG | 0.329672 | 8.1:+336559 | MS.gene012783:CDS |
| CAGTGAAAGAAGCAGTTCTA+TGG | 0.344662 | 8.1:-332414 | None:intergenic |
| GAAATGTCCCGTTTAGGGTT+TGG | 0.350058 | 8.1:+332625 | MS.gene012783:CDS |
| AGTTTGCTTTCGTCCGCCTC+AGG | 0.352890 | 8.1:-332895 | None:intergenic |
| CGTGAAGGAGTCGCTAAATT+AGG | 0.361035 | 8.1:+332325 | MS.gene012783:CDS |
| AAGGTTGATTTACCAACATT+GGG | 0.373746 | 8.1:-332946 | None:intergenic |
| TTGAAAGATGACTTTGATTT+GGG | 0.374915 | 8.1:+336543 | MS.gene012783:CDS |
| TCCCTCTTCCACGGCTCGTC+TGG | 0.378815 | 8.1:-335733 | None:intergenic |
| AGAACTCAGTTTGAATTTCA+AGG | 0.382260 | 8.1:+333039 | MS.gene012783:CDS |
| TGAGTAAAATACTTGATCTT+AGG | 0.382571 | 8.1:-336432 | None:intergenic |
| GATTTATTCATGACAAGAAT+AGG | 0.383461 | 8.1:-332556 | None:intergenic |
| AGGTTATGAGCAGACATTCT+TGG | 0.386318 | 8.1:+336391 | MS.gene012783:intron |
| TCTCTTGTGAGACCAGCTTC+AGG | 0.388690 | 8.1:-333009 | None:intergenic |
| AAGTCTGACAAGAGAGATAA+AGG | 0.391419 | 8.1:+336666 | MS.gene012783:CDS |
| CAAATCAAAGTCATCTTTCA+AGG | 0.392302 | 8.1:-336541 | None:intergenic |
| CTTAAAGCCACTCTGGCAAT+TGG | 0.399226 | 8.1:-336639 | None:intergenic |
| TAGGATCTCCAAACCCTAAA+CGG | 0.401392 | 8.1:-332633 | None:intergenic |
| TCTCTCACTTCAACCTGTCT+TGG | 0.401534 | 8.1:+332699 | MS.gene012783:CDS |
| CCATTGCAGCTAGCAATTGT+AGG | 0.408259 | 8.1:+332919 | MS.gene012783:CDS |
| AATGCTGAAATGAATACTAC+TGG | 0.415349 | 8.1:-336179 | None:intergenic |
| CATCCTCTTGATCAGGAAGT+TGG | 0.417118 | 8.1:+332499 | MS.gene012783:CDS |
| AGCATCCTATGAGCAGATTC+TGG | 0.417507 | 8.1:+335812 | MS.gene012783:CDS |
| CAAGGTTGATTTACCAACAT+TGG | 0.421515 | 8.1:-332947 | None:intergenic |
| TGATCTTAGGCTGTGCTGCC+TGG | 0.423296 | 8.1:-336419 | None:intergenic |
| CCGGGCTCATATAATTGCTT+TGG | 0.431654 | 8.1:+335121 | MS.gene012783:CDS |
| AGTAGTATTCATTTCAGCAT+TGG | 0.432720 | 8.1:+336181 | MS.gene012783:CDS |
| GCCATTCAGGTTGATACTGC+TGG | 0.434612 | 8.1:+335026 | MS.gene012783:intron |
| GTTCTTGTGGGTCCTGAAGC+TGG | 0.440861 | 8.1:+332997 | MS.gene012783:CDS |
| CAAGAAGATCGTGTTCTTGT+GGG | 0.446477 | 8.1:+332985 | MS.gene012783:CDS |
| GTTTGCTTTCGTCCGCCTCA+GGG | 0.447804 | 8.1:-332894 | None:intergenic |
| TGGTCTTCATCCTCTTGATC+AGG | 0.449625 | 8.1:+332492 | MS.gene012783:CDS |
| TTGGTTGCAGAGGACAAAAC+TGG | 0.450758 | 8.1:+335049 | MS.gene012783:CDS |
| CCGTACAACCGTCTTGCATC+AGG | 0.450788 | 8.1:+336214 | MS.gene012783:CDS |
| TCTTAACCGTTGGTTGCAAA+AGG | 0.460544 | 8.1:+336283 | MS.gene012783:CDS |
| ACATTTGTTGCGTTTGTGCA+CGG | 0.466428 | 8.1:+336474 | MS.gene012783:CDS |
| AGGATCTCCAAACCCTAAAC+GGG | 0.466503 | 8.1:-332632 | None:intergenic |
| GTCTCAGCAGATATAGCAAT+AGG | 0.469147 | 8.1:-332652 | None:intergenic |
| CCACCAGAAAAGGAATAGAT+TGG | 0.471568 | 8.1:-332101 | None:intergenic |
| AATCCAGACAATTATACCTC+AGG | 0.474181 | 8.1:+335851 | MS.gene012783:CDS |
| CCTTGAGCATTATGCAATCA+AGG | 0.475161 | 8.1:+335087 | MS.gene012783:CDS |
| AGTGCAGATTTGCCGACGTT+AGG | 0.476830 | 8.1:-332229 | None:intergenic |
| CATTTCAGCATTGGAGGGAA+GGG | 0.480874 | 8.1:+336190 | MS.gene012783:CDS |
| ACCTCTACTGAAGGTGCGGC+GGG | 0.489201 | 8.1:-332125 | None:intergenic |
| AAACCTGAGGTATAATTGTC+TGG | 0.489998 | 8.1:-335854 | None:intergenic |
| AGCCTCCAGAATCTGCTCAT+AGG | 0.491278 | 8.1:-335817 | None:intergenic |
| AGAAGCAGTTCTATGGAGAA+TGG | 0.491490 | 8.1:-332407 | None:intergenic |
| AGTATTCATTTCAGCATTGG+AGG | 0.499259 | 8.1:+336184 | MS.gene012783:CDS |
| AGCATATAGTTCTCCAAGAC+AGG | 0.503239 | 8.1:-332712 | None:intergenic |
| ATTGCTATATCTGCTGAGAC+TGG | 0.505080 | 8.1:+332655 | MS.gene012783:CDS |
| CCTACAATTGCTAGCTGCAA+TGG | 0.508566 | 8.1:-332919 | None:intergenic |
| TATATGCTCAGTGTCTTGAA+TGG | 0.509975 | 8.1:+332727 | MS.gene012783:CDS |
| ATCAAGGAAGAGTCTACTCC+GGG | 0.510619 | 8.1:+335103 | MS.gene012783:CDS |
| AGGCGACTTGGTTGAATCAA+AGG | 0.512056 | 8.1:+336686 | MS.gene012783:CDS |
| TTTCCAACTTCCTGATCAAG+AGG | 0.514682 | 8.1:-332502 | None:intergenic |
| TGCGGCGGGTCCACCAGAAA+AGG | 0.516259 | 8.1:-332111 | None:intergenic |
| CTACAGCTCGTCTTAACCGT+TGG | 0.516393 | 8.1:+336273 | MS.gene012783:CDS |
| ATATCTGCTGAGACTGGACT+TGG | 0.518744 | 8.1:+332661 | MS.gene012783:CDS |
| AGCCAGACGAGCCGTGGAAG+AGG | 0.523102 | 8.1:+335731 | MS.gene012783:CDS |
| CATTTGTTGCGTTTGTGCAC+GGG | 0.523246 | 8.1:+336475 | MS.gene012783:CDS |
| TCATTTCAGCATTGGAGGGA+AGG | 0.523663 | 8.1:+336189 | MS.gene012783:CDS |
| AAAGATGACTTTGATTTGGG+TGG | 0.523787 | 8.1:+336546 | MS.gene012783:CDS |
| GTCGCGGGTGACATGATCGT+CGG | 0.527824 | 8.1:-332299 | None:intergenic |
| AGTTATAGCCAGACGAGCCG+TGG | 0.527937 | 8.1:+335725 | MS.gene012783:CDS |
| AGCATCAGTGAGGAAGAGTA+AGG | 0.529884 | 8.1:-332464 | None:intergenic |
| CTTAATCCTTAAAGCCACTC+TGG | 0.530160 | 8.1:-336646 | None:intergenic |
| TCGCGGGTGACATGATCGTC+GGG | 0.530196 | 8.1:-332298 | None:intergenic |
| TTCCTCACTGATGCTAGAGC+TGG | 0.533462 | 8.1:+332472 | MS.gene012783:CDS |
| CAAGAGAGATAAAGGCGACT+TGG | 0.533482 | 8.1:+336674 | MS.gene012783:CDS |
| ATTTCAGCATTGGAGGGAAG+GGG | 0.533760 | 8.1:+336191 | MS.gene012783:CDS |
| CCTTGATTGCATAATGCTCA+AGG | 0.534896 | 8.1:-335087 | None:intergenic |
| GCAAGAAGATCGTGTTCTTG+TGG | 0.536796 | 8.1:+332984 | MS.gene012783:CDS |
| ATTGTAGGACGCCCCAATGT+TGG | 0.540370 | 8.1:+332934 | MS.gene012783:CDS |
| GCCAGACGAGCCGTGGAAGA+GGG | 0.542466 | 8.1:+335732 | MS.gene012783:CDS |
| GACTCCTTCACGAATGTCGC+GGG | 0.544485 | 8.1:-332314 | None:intergenic |
| TACTAAGAAGAACAACAAGT+TGG | 0.545516 | 8.1:+332153 | MS.gene012783:CDS |
| CGGCCGAGAATGATGACGGT+GGG | 0.550366 | 8.1:-332205 | None:intergenic |
| CCAAAGCAATTATATGAGCC+CGG | 0.555243 | 8.1:-335121 | None:intergenic |
| ATTGCTTTGGTACTAGATGC+CGG | 0.556355 | 8.1:+335134 | MS.gene012783:CDS |
| GAACAAGATGGATCTTCTAA+GGG | 0.556692 | 8.1:+335776 | MS.gene012783:CDS |
| ACCCGCCGCACCTTCAGTAG+AGG | 0.557052 | 8.1:+332124 | MS.gene012783:CDS |
| TTCAGGTTGATACTGCTGGT+TGG | 0.557730 | 8.1:+335030 | MS.gene012783:intron |
| GGAACTAGTCTCATCATCGC+AGG | 0.566444 | 8.1:-332872 | None:intergenic |
| AGTCCAAAACTCTGAAACGC+AGG | 0.567705 | 8.1:-332351 | None:intergenic |
| ATGGAGAATGGAACCAGAAG+TGG | 0.568402 | 8.1:-332395 | None:intergenic |
| TGTTGTGATTGTGAACAAGA+TGG | 0.568875 | 8.1:+335764 | MS.gene012783:CDS |
| CGAGCCGTGGAAGAGGGACG+TGG | 0.569833 | 8.1:+335738 | MS.gene012783:CDS |
| CCTGATGCAAGACGGTTGTA+CGG | 0.574718 | 8.1:-336214 | None:intergenic |
| AAGCCACTCTGGCAATTGGA+TGG | 0.576147 | 8.1:-336635 | None:intergenic |
| ATACTGCTGGTTGGTTGCAG+AGG | 0.577960 | 8.1:+335039 | MS.gene012783:CDS |
| AACCTCTACTGAAGGTGCGG+CGG | 0.578312 | 8.1:-332126 | None:intergenic |
| TCTATTGCTAAGAAAGATGC+TGG | 0.579545 | 8.1:+336594 | MS.gene012783:CDS |
| TTTGCTTTCGTCCGCCTCAG+GGG | 0.584054 | 8.1:-332893 | None:intergenic |
| CAGAGGACAAAACTGGAGAA+AGG | 0.588172 | 8.1:+335056 | MS.gene012783:CDS |
| TGCACAAACGCAACAAATGT+AGG | 0.589076 | 8.1:-336471 | None:intergenic |
| TTGCAACAATGTATTCAGCA+AGG | 0.591457 | 8.1:-332965 | None:intergenic |
| TTGCTAAGAAAGATGCTGGT+GGG | 0.592670 | 8.1:+336598 | MS.gene012783:CDS |
| CGACTCCTTCACGAATGTCG+CGG | 0.594219 | 8.1:-332315 | None:intergenic |
| CAGACATTCTTGGAAAGACC+AGG | 0.594703 | 8.1:+336401 | MS.gene012783:CDS |
| CAGATTTGCCGACGTTAGGT+CGG | 0.595065 | 8.1:-332225 | None:intergenic |
| GGCCGAGAATGATGACGGTG+GGG | 0.596616 | 8.1:-332204 | None:intergenic |
| CATTATAGATGAAAGTGCTA+AGG | 0.602590 | 8.1:+332843 | MS.gene012783:intron |
| AATCAAGGAAGAGTCTACTC+CGG | 0.602668 | 8.1:+335102 | MS.gene012783:CDS |
| GTATTCATTTCAGCATTGGA+GGG | 0.607640 | 8.1:+336185 | MS.gene012783:CDS |
| AGTACAGAAACCTCTACTGA+AGG | 0.618332 | 8.1:-332134 | None:intergenic |
| ATGCTGAAATGAATACTACT+GGG | 0.619348 | 8.1:-336178 | None:intergenic |
| TAGCCATCCAATTGCCAGAG+TGG | 0.626194 | 8.1:+336632 | MS.gene012783:CDS |
| AAGACCACGTCCCTCTTCCA+CGG | 0.628476 | 8.1:-335742 | None:intergenic |
| ACAAGAATAGGTTTAAGTAG+AGG | 0.634465 | 8.1:-332544 | None:intergenic |
| ATTGCTAAGAAAGATGCTGG+TGG | 0.635595 | 8.1:+336597 | MS.gene012783:CDS |
| TGAGACTAGTTCCCCTGAGG+CGG | 0.640091 | 8.1:+332882 | MS.gene012783:CDS |
| GTCACCCGCGACATTCGTGA+AGG | 0.642685 | 8.1:+332310 | MS.gene012783:CDS |
| ATATAAGCAGCATACCTCGC+CGG | 0.643834 | 8.1:-335153 | None:intergenic |
| AGGTCGGCCGAGAATGATGA+CGG | 0.645973 | 8.1:-332209 | None:intergenic |
| AGAAACCTCTACTGAAGGTG+CGG | 0.650291 | 8.1:-332129 | None:intergenic |
| AGGTTGATTTACCAACATTG+GGG | 0.651188 | 8.1:-332945 | None:intergenic |
| AGCTTTCTGATACAGACACC+AGG | 0.651325 | 8.1:+336505 | MS.gene012783:CDS |
| AACAAGATGGATCTTCTAAG+GGG | 0.653213 | 8.1:+335777 | MS.gene012783:CDS |
| ATCCTATGAGCAGATTCTGG+AGG | 0.674083 | 8.1:+335815 | MS.gene012783:CDS |
| TTTGGTACTAGATGCCGGCG+AGG | 0.691470 | 8.1:+335139 | MS.gene012783:CDS |
| ATCAATGACCTGATGCAAGA+CGG | 0.696129 | 8.1:-336222 | None:intergenic |
| TCGGCCGAGAATGATGACGG+TGG | 0.705355 | 8.1:-332206 | None:intergenic |
| GACCAGCTCTAGCATCAGTG+AGG | 0.711854 | 8.1:-332474 | None:intergenic |
| TGATGAGACTAGTTCCCCTG+AGG | 0.733960 | 8.1:+332879 | MS.gene012783:CDS |
| ATTCTCGGCCGACCTAACGT+CGG | 0.735722 | 8.1:+332217 | MS.gene012783:CDS |
| ACAAACGCAACAAATGTAGG+CGG | 0.770638 | 8.1:-336468 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAATAAATAAATAAAA+GGG | - | chr8.1:332759-332778 | None:intergenic | 0.0% |
| !!! | TTTTATAATAAATAAATAAA+AGG | - | chr8.1:332760-332779 | None:intergenic | 0.0% |
| !! | ATAATATCTTGATATTATTA+TGG | + | chr8.1:334001-334020 | MS.gene012783:intron | 10.0% |
| !! | ATTTAATTGTCATATTAAAT+AGG | + | chr8.1:333516-333535 | MS.gene012783:intron | 10.0% |
| !! | TTTAATTGTCATATTAAATA+GGG | + | chr8.1:333517-333536 | MS.gene012783:intron | 10.0% |
| !!! | AAATATTTAATCTTGTTATA+AGG | + | chr8.1:335634-335653 | MS.gene012783:intron | 10.0% |
| !!! | ATAAATTTTAAAAATGTAAC+CGG | - | chr8.1:334995-335014 | None:intergenic | 10.0% |
| !! | AAAATTGAAAACTAATCATA+TGG | - | chr8.1:334043-334062 | None:intergenic | 15.0% |
| !! | AAATTGAAAACTAATCATAT+GGG | - | chr8.1:334042-334061 | None:intergenic | 15.0% |
| !! | CTAAATAAATAAGAAATTTG+AGG | - | chr8.1:334130-334149 | None:intergenic | 15.0% |
| !! | TAAATTACAATACAAACAAT+GGG | - | chr8.1:336120-336139 | None:intergenic | 15.0% |
| !! | TAATGTTTATTGTTCTAATT+TGG | + | chr8.1:335248-335267 | MS.gene012783:intron | 15.0% |
| !! | TTCAAATCAAAATACTAATT+TGG | - | chr8.1:333492-333511 | None:intergenic | 15.0% |
| !!! | ATGTTACCATTTTTTAAAAA+TGG | + | chr8.1:335946-335965 | MS.gene012783:intron | 15.0% |
| !!! | CTCAAATTTCTTATTTATTT+AGG | + | chr8.1:334128-334147 | MS.gene012783:intron | 15.0% |
| !!! | TTGTTATAAGGTTTTTTTAT+TGG | + | chr8.1:335646-335665 | MS.gene012783:intron | 15.0% |
| !! | AAAGTGTAAACCAAAAATTA+TGG | - | chr8.1:335481-335500 | None:intergenic | 20.0% |
| !! | AACATTTAATATTGAAACTC+CGG | + | chr8.1:334973-334992 | MS.gene012783:intron | 20.0% |
| !! | AAGTGTAAACCAAAAATTAT+GGG | - | chr8.1:335480-335499 | None:intergenic | 20.0% |
| !! | ATCATGTTAAAACACAAATT+TGG | - | chr8.1:335976-335995 | None:intergenic | 20.0% |
| !! | ATTATAGGATAGAAATAAAG+AGG | + | chr8.1:334349-334368 | MS.gene012783:intron | 20.0% |
| !! | GATATTATTATGGAATGTAT+TGG | + | chr8.1:334011-334030 | MS.gene012783:intron | 20.0% |
| !! | GGATCAATGTTATTAAATTA+CGG | + | chr8.1:334542-334561 | MS.gene012783:intron | 20.0% |
| !! | GTAAATTACAATACAAACAA+TGG | - | chr8.1:336121-336140 | None:intergenic | 20.0% |
| !! | TGTAATTTACTATTGAGTAT+TGG | + | chr8.1:336131-336150 | MS.gene012783:intron | 20.0% |
| !! | TTATAGGATAGAAATAAAGA+GGG | + | chr8.1:334350-334369 | MS.gene012783:intron | 20.0% |
| !! | TTCTATCCTATAATTTAACT+TGG | - | chr8.1:334343-334362 | None:intergenic | 20.0% |
| !!! | ATTGATCACGTTTTTAATAA+AGG | - | chr8.1:335576-335595 | None:intergenic | 20.0% |
| !!! | TGATATAATTGATAATGACT+TGG | - | chr8.1:334204-334223 | None:intergenic | 20.0% |
| !!! | TTACTAGAACAATTACATTT+TGG | - | chr8.1:335314-335333 | None:intergenic | 20.0% |
| !!! | TTGATCACGTTTTTAATAAA+GGG | - | chr8.1:335575-335594 | None:intergenic | 20.0% |
| !!! | TTTGAATCTACTAAGATTTT+TGG | + | chr8.1:335354-335373 | MS.gene012783:intron | 20.0% |
| ! | AACTACTTCAATTACAACTT+TGG | + | chr8.1:336310-336329 | MS.gene012783:intron | 25.0% |
| ! | ACAACATAACTTCATTTAAG+GGG | - | chr8.1:335505-335524 | None:intergenic | 25.0% |
| ! | ACAGGTATGTAAAATAATCA+TGG | - | chr8.1:334085-334104 | None:intergenic | 25.0% |
| ! | ACTACTTCAATTACAACTTT+GGG | + | chr8.1:336311-336330 | MS.gene012783:intron | 25.0% |
| ! | ACTCTACCAAGTTAAATTAT+AGG | + | chr8.1:334334-334353 | MS.gene012783:intron | 25.0% |
| ! | AGAATTGTAGCAAATTGATT+TGG | - | chr8.1:333384-333403 | None:intergenic | 25.0% |
| ! | ATGTGTACATAAGAATAAAG+TGG | + | chr8.1:333597-333616 | MS.gene012783:intron | 25.0% |
| ! | GACAACATAACTTCATTTAA+GGG | - | chr8.1:335506-335525 | None:intergenic | 25.0% |
| ! | GATTTATTCATGACAAGAAT+AGG | - | chr8.1:332559-332578 | None:intergenic | 25.0% |
| ! | GGCAATAATATCTAATTTGA+AGG | - | chr8.1:333195-333214 | None:intergenic | 25.0% |
| ! | TCATTGATACATACGAAAAA+TGG | + | chr8.1:336237-336256 | MS.gene012783:CDS | 25.0% |
| ! | TGAGTAAAATACTTGATCTT+AGG | - | chr8.1:336435-336454 | None:intergenic | 25.0% |
| ! | TGTGTACATAAGAATAAAGT+GGG | + | chr8.1:333598-333617 | MS.gene012783:intron | 25.0% |
| ! | TTAAAAGAAGAATGTAGAAG+AGG | - | chr8.1:333835-333854 | None:intergenic | 25.0% |
| !! | ACTATTTATCTGGTAAGTTT+TGG | + | chr8.1:333066-333085 | MS.gene012783:intron | 25.0% |
| !! | AGAATAGAGATTTAAAACCA+AGG | - | chr8.1:333413-333432 | None:intergenic | 25.0% |
| !! | AGTTGTGAGATTTTAGATAA+AGG | - | chr8.1:334251-334270 | None:intergenic | 25.0% |
| !! | TAAGATCAAGTATTTTACTC+AGG | + | chr8.1:336434-336453 | MS.gene012783:CDS | 25.0% |
| !! | TGGTTGATTATATCACATTT+TGG | - | chr8.1:335200-335219 | None:intergenic | 25.0% |
| !! | TTGAAAGATGACTTTGATTT+GGG | + | chr8.1:336543-336562 | MS.gene012783:CDS | 25.0% |
| !!! | AATTTAACTTGGTAGAGTAA+TGG | - | chr8.1:334332-334351 | None:intergenic | 25.0% |
| !!! | ATGTACACATTAGCTATTTT+AGG | - | chr8.1:333587-333606 | None:intergenic | 25.0% |
| !!! | ATTTAACTTGGTAGAGTAAT+GGG | - | chr8.1:334331-334350 | None:intergenic | 25.0% |
| !!! | CCTTCAATGAAAAAGTATTT+GGG | - | chr8.1:335397-335416 | None:intergenic | 25.0% |
| !!! | GAGAGTTGATAGAAAAAAAT+CGG | + | chr8.1:333978-333997 | MS.gene012783:intron | 25.0% |
| !!! | GGATGTCCATTTTTAAAAAA+TGG | - | chr8.1:335955-335974 | None:intergenic | 25.0% |
| !!! | TAGAACAATTACATTTTGGT+TGG | - | chr8.1:335310-335329 | None:intergenic | 25.0% |
| !!! | TCTCGTTTCAGTTATTTTTT+TGG | + | chr8.1:333928-333947 | MS.gene012783:intron | 25.0% |
| !!! | TGTACACATTAGCTATTTTA+GGG | - | chr8.1:333586-333605 | None:intergenic | 25.0% |
| AAAAACGTGATCAATCAGAA+AGG | + | chr8.1:335581-335600 | MS.gene012783:intron | 30.0% | |
| AAAAGATTCCCAACTATTTC+CGG | - | chr8.1:333767-333786 | None:intergenic | 30.0% | |
| AAAATCTCACAACTTCAACA+TGG | + | chr8.1:334257-334276 | MS.gene012783:intron | 30.0% | |
| AACTTCGCATGTTAAAACAT+TGG | - | chr8.1:335220-335239 | None:intergenic | 30.0% | |
| AAGAACAAACAAAATCTGTG+AGG | + | chr8.1:336025-336044 | MS.gene012783:intron | 30.0% | |
| AATGCTGAAATGAATACTAC+TGG | - | chr8.1:336182-336201 | None:intergenic | 30.0% | |
| ACAAGAATAGGTTTAAGTAG+AGG | - | chr8.1:332547-332566 | None:intergenic | 30.0% | |
| AGAACTCAGTTTGAATTTCA+AGG | + | chr8.1:333039-333058 | MS.gene012783:CDS | 30.0% | |
| AGGATTAAACAAAATAGCCA+AGG | - | chr8.1:333815-333834 | None:intergenic | 30.0% | |
| AGTAGTATTCATTTCAGCAT+TGG | + | chr8.1:336181-336200 | MS.gene012783:CDS | 30.0% | |
| ATAACCTGATCAAAAACAAC+CGG | - | chr8.1:336378-336397 | None:intergenic | 30.0% | |
| ATGCTGAAATGAATACTACT+GGG | - | chr8.1:336181-336200 | None:intergenic | 30.0% | |
| ATGTTATTAAATTACGGCCA+TGG | + | chr8.1:334548-334567 | MS.gene012783:intron | 30.0% | |
| CAAATCAAAGTCATCTTTCA+AGG | - | chr8.1:336544-336563 | None:intergenic | 30.0% | |
| CAGTAATAATACTAAGCAAC+AGG | - | chr8.1:334103-334122 | None:intergenic | 30.0% | |
| CTAGTAACTCATTTATCTTG+TGG | + | chr8.1:335327-335346 | MS.gene012783:intron | 30.0% | |
| CTGTGTTGTAAAAGATTGAT+TGG | - | chr8.1:334722-334741 | None:intergenic | 30.0% | |
| CTTGAAAGATGACTTTGATT+TGG | + | chr8.1:336542-336561 | MS.gene012783:CDS | 30.0% | |
| GGACAACATAACTTCATTTA+AGG | - | chr8.1:335507-335526 | None:intergenic | 30.0% | |
| GTAGTAAATATTCTTTCTCC+CGG | + | chr8.1:336356-336375 | MS.gene012783:intron | 30.0% | |
| GTGTACATAAGAATAAAGTG+GGG | + | chr8.1:333599-333618 | MS.gene012783:intron | 30.0% | |
| TAAGAAATAACAGCAGGATT+TGG | + | chr8.1:334478-334497 | MS.gene012783:intron | 30.0% | |
| TACTAAGAAGAACAACAAGT+TGG | + | chr8.1:332153-332172 | MS.gene012783:CDS | 30.0% | |
| TCAAGGAAGAACTATTTATC+TGG | + | chr8.1:333056-333075 | MS.gene012783:CDS | 30.0% | |
| TCTAAAGGAATGTATCTTGT+TGG | + | chr8.1:333133-333152 | MS.gene012783:intron | 30.0% | |
| TGAAGAGTAAAATGTGCAAT+TGG | + | chr8.1:336334-336353 | MS.gene012783:intron | 30.0% | |
| TTAACACCTAGAAATTAGAG+AGG | - | chr8.1:335612-335631 | None:intergenic | 30.0% | |
| ! | AAGGTTGATTTACCAACATT+GGG | - | chr8.1:332949-332968 | None:intergenic | 30.0% |
| ! | ATTCCAATCTATTCCTTTTC+TGG | + | chr8.1:332098-332117 | MS.gene012783:CDS | 30.0% |
| ! | CAAGTATTTTACTCAGGTTA+AGG | + | chr8.1:336440-336459 | MS.gene012783:CDS | 30.0% |
| ! | CATCTTTCAAGGATTTTGTT+AGG | - | chr8.1:336533-336552 | None:intergenic | 30.0% |
| ! | GTCTTTTTAACATCTATCAC+TGG | - | chr8.1:333647-333666 | None:intergenic | 30.0% |
| ! | TGTGAGATTTTAGATAAAGG+AGG | - | chr8.1:334248-334267 | None:intergenic | 30.0% |
| ! | TTAATACCTTTTGCAACCAA+CGG | - | chr8.1:336292-336311 | None:intergenic | 30.0% |
| ! | TTTAGTAGTGTTGTTAGAGT+TGG | + | chr8.1:333098-333117 | MS.gene012783:intron | 30.0% |
| !! | CATTATAGATGAAAGTGCTA+AGG | + | chr8.1:332843-332862 | MS.gene012783:intron | 30.0% |
| !! | CTGTATTGATAATGAACTTC+AGG | - | chr8.1:334896-334915 | None:intergenic | 30.0% |
| !! | GCCTTCAATGAAAAAGTATT+TGG | - | chr8.1:335398-335417 | None:intergenic | 30.0% |
| !! | GTACACATTAGCTATTTTAG+GGG | - | chr8.1:333585-333604 | None:intergenic | 30.0% |
| !!! | CCCAAATACTTTTTCATTGA+AGG | + | chr8.1:335394-335413 | MS.gene012783:intron | 30.0% |
| !!! | GAGTATTGGCAATTTTCAAT+AGG | + | chr8.1:336145-336164 | MS.gene012783:intron | 30.0% |
| !!! | TATCTGGTAAGTTTTGGTTT+TGG | + | chr8.1:333072-333091 | MS.gene012783:intron | 30.0% |
| AAAAATTATGGGACTGAAGC+AGG | - | chr8.1:335469-335488 | None:intergenic | 35.0% | |
| AAACCTGAGGTATAATTGTC+TGG | - | chr8.1:335857-335876 | None:intergenic | 35.0% | |
| AAAGGAATGTATCTTGTTGG+AGG | + | chr8.1:333136-333155 | MS.gene012783:intron | 35.0% | |
| AACAAGATGGATCTTCTAAG+GGG | + | chr8.1:335777-335796 | MS.gene012783:CDS | 35.0% | |
| AAGTCTGACAAGAGAGATAA+AGG | + | chr8.1:336666-336685 | MS.gene012783:CDS | 35.0% | |
| AATCCAGACAATTATACCTC+AGG | + | chr8.1:335851-335870 | MS.gene012783:CDS | 35.0% | |
| ATAAAGAGGGACATGTTTGA+AGG | + | chr8.1:334363-334382 | MS.gene012783:intron | 35.0% | |
| ATAACTACATAGCAAACCTG+AGG | - | chr8.1:335870-335889 | None:intergenic | 35.0% | |
| ATACTTGATGTCACCTACAT+AGG | + | chr8.1:333869-333888 | MS.gene012783:intron | 35.0% | |
| ATGTAGGTGACATCAAGTAT+TGG | - | chr8.1:333869-333888 | None:intergenic | 35.0% | |
| ATTTGGGTGGAATTCCTATA+AGG | + | chr8.1:336559-336578 | MS.gene012783:CDS | 35.0% | |
| CAAATCGGAAAAGAAATGTG+TGG | - | chr8.1:333216-333235 | None:intergenic | 35.0% | |
| CACATACCAATGCATCATAA+TGG | - | chr8.1:335528-335547 | None:intergenic | 35.0% | |
| CATAAGAATAAAGTGGGGAT+AGG | + | chr8.1:333604-333623 | MS.gene012783:intron | 35.0% | |
| CATTTCCTGAAAATTACTCG+AGG | + | chr8.1:334799-334818 | MS.gene012783:intron | 35.0% | |
| CGTCTAGATGTTCAATGTAT+TGG | + | chr8.1:335901-335920 | MS.gene012783:intron | 35.0% | |
| CTAATGAAATGTCCCGTTTA+GGG | + | chr8.1:332620-332639 | MS.gene012783:CDS | 35.0% | |
| GAACAAGATGGATCTTCTAA+GGG | + | chr8.1:335776-335795 | MS.gene012783:CDS | 35.0% | |
| GAATCACTCTTTGATGTTGA+TGG | + | chr8.1:332580-332599 | MS.gene012783:CDS | 35.0% | |
| GTTATTTGGTTGCAAAGGAA+CGG | + | chr8.1:333719-333738 | MS.gene012783:intron | 35.0% | |
| GTTTACTCTGCGTTTATGAT+AGG | - | chr8.1:334956-334975 | None:intergenic | 35.0% | |
| TAAAGAGGGACATGTTTGAA+GGG | + | chr8.1:334364-334383 | MS.gene012783:intron | 35.0% | |
| TAACCTGATCAAAAACAACC+GGG | - | chr8.1:336377-336396 | None:intergenic | 35.0% | |
| TATATGCTCAGTGTCTTGAA+TGG | + | chr8.1:332727-332746 | MS.gene012783:CDS | 35.0% | |
| TCTATTGCTAAGAAAGATGC+TGG | + | chr8.1:336594-336613 | MS.gene012783:CDS | 35.0% | |
| TCTGGGTTCTTGAAAACTAA+GGG | - | chr8.1:334850-334869 | None:intergenic | 35.0% | |
| TGAACAAGATGGATCTTCTA+AGG | + | chr8.1:335775-335794 | MS.gene012783:CDS | 35.0% | |
| TGCCCTGTTATATACATCAT+CGG | + | chr8.1:333322-333341 | MS.gene012783:intron | 35.0% | |
| TGGAAACTGACAGAATCTAA+AGG | + | chr8.1:333118-333137 | MS.gene012783:intron | 35.0% | |
| TGTAGGTGACATCAAGTATT+GGG | - | chr8.1:333868-333887 | None:intergenic | 35.0% | |
| TGTTGGAGGAAAACATAGTA+TGG | + | chr8.1:333150-333169 | MS.gene012783:intron | 35.0% | |
| TGTTGTCCATTATGATGCAT+TGG | + | chr8.1:335519-335538 | MS.gene012783:intron | 35.0% | |
| TGTTGTGATTGTGAACAAGA+TGG | + | chr8.1:335764-335783 | MS.gene012783:CDS | 35.0% | |
| TTATTTGGTTGCAAAGGAAC+GGG | + | chr8.1:333720-333739 | MS.gene012783:intron | 35.0% | |
| TTCGTTTAGCACTTACTATC+TGG | - | chr8.1:335686-335705 | None:intergenic | 35.0% | |
| TTCTGGGTTCTTGAAAACTA+AGG | - | chr8.1:334851-334870 | None:intergenic | 35.0% | |
| TTGATCAGGAAGTTGGAAAA+TGG | + | chr8.1:332506-332525 | MS.gene012783:CDS | 35.0% | |
| TTGCAACAATGTATTCAGCA+AGG | - | chr8.1:332968-332987 | None:intergenic | 35.0% | |
| TTTGATGGAGGAAGAAGATA+GGG | + | chr8.1:334445-334464 | MS.gene012783:intron | 35.0% | |
| ! | AGGTTGATTTACCAACATTG+GGG | - | chr8.1:332948-332967 | None:intergenic | 35.0% |
| ! | AGTATTCATTTCAGCATTGG+AGG | + | chr8.1:336184-336203 | MS.gene012783:CDS | 35.0% |
| ! | ATTATGTTTTGCTGCCATTC+AGG | + | chr8.1:335013-335032 | MS.gene012783:intron | 35.0% |
| ! | CAAGGTTGATTTACCAACAT+TGG | - | chr8.1:332950-332969 | None:intergenic | 35.0% |
| ! | GCTACAATTCTGATTTTCCT+TGG | + | chr8.1:333393-333412 | MS.gene012783:intron | 35.0% |
| ! | GGAAATAGTTGGGAATCTTT+TGG | + | chr8.1:333766-333785 | MS.gene012783:intron | 35.0% |
| ! | GGCAATTTTCAATAGGTTAC+TGG | + | chr8.1:336152-336171 | MS.gene012783:intron | 35.0% |
| ! | GTATTCATTTCAGCATTGGA+GGG | + | chr8.1:336185-336204 | MS.gene012783:CDS | 35.0% |
| ! | TGCTTCAGTCCCATAATTTT+TGG | + | chr8.1:335468-335487 | MS.gene012783:intron | 35.0% |
| !! | AAAGATGACTTTGATTTGGG+TGG | + | chr8.1:336546-336565 | MS.gene012783:CDS | 35.0% |
| !! | GTGTTTTATGGTGGAAATAG+CGG | + | chr8.1:334635-334654 | MS.gene012783:intron | 35.0% |
| !! | TAGCTATTTTAGGGGTTTTC+TGG | - | chr8.1:333577-333596 | None:intergenic | 35.0% |
| !! | TAGGGTCTGCTTTAAGATAT+AGG | + | chr8.1:333535-333554 | MS.gene012783:intron | 35.0% |
| AATCAAGGAAGAGTCTACTC+CGG | + | chr8.1:335102-335121 | MS.gene012783:CDS | 40.0% | |
| ACAAACGCAACAAATGTAGG+CGG | - | chr8.1:336471-336490 | None:intergenic | 40.0% | |
| ACAAAGAAAGAGGGATGTTG+AGG | - | chr8.1:336071-336090 | None:intergenic | 40.0% | |
| ACCTGATATCACCTTGATAC+AGG | + | chr8.1:334870-334889 | MS.gene012783:intron | 40.0% | |
| ACTTGAATGCGCACACAAAT+CGG | - | chr8.1:333231-333250 | None:intergenic | 40.0% | |
| AGAAGCAGTTCTATGGAGAA+TGG | - | chr8.1:332410-332429 | None:intergenic | 40.0% | |
| AGCATATAGTTCTCCAAGAC+AGG | - | chr8.1:332715-332734 | None:intergenic | 40.0% | |
| AGCCAATTTGTGAAGGATAG+TGG | + | chr8.1:334605-334624 | MS.gene012783:intron | 40.0% | |
| AGGAAGAAGATAGGGAAGTA+GGG | + | chr8.1:334453-334472 | MS.gene012783:intron | 40.0% | |
| AGGGCTTAAGAAATAACAGC+AGG | + | chr8.1:334472-334491 | MS.gene012783:intron | 40.0% | |
| AGGTTATGAGCAGACATTCT+TGG | + | chr8.1:336391-336410 | MS.gene012783:intron | 40.0% | |
| AGTACAGAAACCTCTACTGA+AGG | - | chr8.1:332137-332156 | None:intergenic | 40.0% | |
| ATCAAGGTGATATCAGGTTC+TGG | - | chr8.1:334868-334887 | None:intergenic | 40.0% | |
| ATCAATGACCTGATGCAAGA+CGG | - | chr8.1:336225-336244 | None:intergenic | 40.0% | |
| ATTGAAGGCTCGATAGTTCT+AGG | + | chr8.1:335409-335428 | MS.gene012783:intron | 40.0% | |
| ATTGCTAAGAAAGATGCTGG+TGG | + | chr8.1:336597-336616 | MS.gene012783:CDS | 40.0% | |
| ATTGCTATATCTGCTGAGAC+TGG | + | chr8.1:332655-332674 | MS.gene012783:CDS | 40.0% | |
| ATTGCTTTGGTACTAGATGC+CGG | + | chr8.1:335134-335153 | MS.gene012783:CDS | 40.0% | |
| CAAGAAGATCGTGTTCTTGT+GGG | + | chr8.1:332985-333004 | MS.gene012783:CDS | 40.0% | |
| CAATTGTCCTTGGAGAGTAA+AGG | + | chr8.1:334521-334540 | MS.gene012783:intron | 40.0% | |
| CAGTGAAAGAAGCAGTTCTA+TGG | - | chr8.1:332417-332436 | None:intergenic | 40.0% | |
| CATTGATCCTTTACTCTCCA+AGG | - | chr8.1:334531-334550 | None:intergenic | 40.0% | |
| CCAAAGCAATTATATGAGCC+CGG | - | chr8.1:335124-335143 | None:intergenic | 40.0% | |
| CCACCAGAAAAGGAATAGAT+TGG | - | chr8.1:332104-332123 | None:intergenic | 40.0% | |
| CCCCGATGATGTATATAACA+GGG | - | chr8.1:333327-333346 | None:intergenic | 40.0% | |
| CCCTGTTATATACATCATCG+GGG | + | chr8.1:333324-333343 | MS.gene012783:intron | 40.0% | |
| CCTGTTATATACATCATCGG+GGG | + | chr8.1:333325-333344 | MS.gene012783:intron | 40.0% | |
| CCTTCACAAATTGGCTATAG+CGG | - | chr8.1:334601-334620 | None:intergenic | 40.0% | |
| CCTTGAGCATTATGCAATCA+AGG | + | chr8.1:335087-335106 | MS.gene012783:CDS | 40.0% | |
| CCTTGATTGCATAATGCTCA+AGG | - | chr8.1:335090-335109 | None:intergenic | 40.0% | |
| CTATCTTCTTCCTCCATCAA+AGG | - | chr8.1:334446-334465 | None:intergenic | 40.0% | |
| CTGGGTTCTTGAAAACTAAG+GGG | - | chr8.1:334849-334868 | None:intergenic | 40.0% | |
| CTTAATCCTTAAAGCCACTC+TGG | - | chr8.1:336649-336668 | None:intergenic | 40.0% | |
| CTTTACTCTCCAAGGACAAT+TGG | - | chr8.1:334523-334542 | None:intergenic | 40.0% | |
| CTTTGATGGAGGAAGAAGAT+AGG | + | chr8.1:334444-334463 | MS.gene012783:intron | 40.0% | |
| GCCCTGTTATATACATCATC+GGG | + | chr8.1:333323-333342 | MS.gene012783:intron | 40.0% | |
| GCTAATGAAATGTCCCGTTT+AGG | + | chr8.1:332619-332638 | MS.gene012783:CDS | 40.0% | |
| GCTGTTCTTGGTAGATTGTT+GGG | + | chr8.1:334763-334782 | MS.gene012783:intron | 40.0% | |
| GTCTCAGCAGATATAGCAAT+AGG | - | chr8.1:332655-332674 | None:intergenic | 40.0% | |
| GTCTCTCCTCTCTAATTTCT+AGG | + | chr8.1:335603-335622 | MS.gene012783:intron | 40.0% | |
| GTGAGGAAGAGTAAGGAATT+AGG | - | chr8.1:332460-332479 | None:intergenic | 40.0% | |
| TAGGATCTCCAAACCCTAAA+CGG | - | chr8.1:332636-332655 | None:intergenic | 40.0% | |
| TCAACAGTTCGTTACAGAGT+GGG | - | chr8.1:333672-333691 | None:intergenic | 40.0% | |
| TCAAGGTGATATCAGGTTCT+GGG | - | chr8.1:334867-334886 | None:intergenic | 40.0% | |
| TCTGTAACGAACTGTTGAGT+TGG | + | chr8.1:333674-333693 | MS.gene012783:intron | 40.0% | |
| TGCACAAACGCAACAAATGT+AGG | - | chr8.1:336474-336493 | None:intergenic | 40.0% | |
| TGCTGTTCTTGGTAGATTGT+TGG | + | chr8.1:334762-334781 | MS.gene012783:intron | 40.0% | |
| TGTTTGAAGGGAGGATAGAA+TGG | + | chr8.1:334376-334395 | MS.gene012783:intron | 40.0% | |
| TTCAATTTGCACACATCCTG+AGG | - | chr8.1:334405-334424 | None:intergenic | 40.0% | |
| TTCTTTGCTGCATATAGCCT+TGG | + | chr8.1:333260-333279 | MS.gene012783:intron | 40.0% | |
| TTGCTAAGAAAGATGCTGGT+GGG | + | chr8.1:336598-336617 | MS.gene012783:CDS | 40.0% | |
| TTTCCAACTTCCTGATCAAG+AGG | - | chr8.1:332505-332524 | None:intergenic | 40.0% | |
| ! | ACATTTGTTGCGTTTGTGCA+CGG | + | chr8.1:336474-336493 | MS.gene012783:CDS | 40.0% |
| ! | AGTGGCGATATGGTGTTTTA+TGG | + | chr8.1:334623-334642 | MS.gene012783:intron | 40.0% |
| ! | CAACACCTCGAGTAATTTTC+AGG | - | chr8.1:334807-334826 | None:intergenic | 40.0% |
| ! | CAAGGATTTTGTTAGGAACC+TGG | - | chr8.1:336526-336545 | None:intergenic | 40.0% |
| ! | CCAATCTATTCCTTTTCTGG+TGG | + | chr8.1:332101-332120 | MS.gene012783:CDS | 40.0% |
| ! | TAGAGTAATGGGACACATCA+TGG | - | chr8.1:334320-334339 | None:intergenic | 40.0% |
| ! | TCTTAACCGTTGGTTGCAAA+AGG | + | chr8.1:336283-336302 | MS.gene012783:CDS | 40.0% |
| ! | TTGAAGGCTCGATAGTTCTA+GGG | + | chr8.1:335410-335429 | MS.gene012783:intron | 40.0% |
| !! | GGTGTGTTATTTGGTTGCAA+AGG | + | chr8.1:333714-333733 | MS.gene012783:intron | 40.0% |
| AAATTACGGCCATGGCAGAT+TGG | + | chr8.1:334556-334575 | MS.gene012783:intron | 45.0% | |
| AATTACGGCCATGGCAGATT+GGG | + | chr8.1:334557-334576 | MS.gene012783:intron | 45.0% | |
| ACCAGCAGTATCAACCTGAA+TGG | - | chr8.1:335030-335049 | None:intergenic | 45.0% | |
| ACCATACTAACCGCCTTTGA+TGG | + | chr8.1:334430-334449 | MS.gene012783:intron | 45.0% | |
| AGAAACCTCTACTGAAGGTG+CGG | - | chr8.1:332132-332151 | None:intergenic | 45.0% | |
| AGATACGGCCGGAAATAGTT+GGG | + | chr8.1:333756-333775 | MS.gene012783:intron | 45.0% | |
| AGCATCAGTGAGGAAGAGTA+AGG | - | chr8.1:332467-332486 | None:intergenic | 45.0% | |
| AGCATCCTATGAGCAGATTC+TGG | + | chr8.1:335812-335831 | MS.gene012783:CDS | 45.0% | |
| AGCTTTCTGATACAGACACC+AGG | + | chr8.1:336505-336524 | MS.gene012783:CDS | 45.0% | |
| AGGATCTCCAAACCCTAAAC+GGG | - | chr8.1:332635-332654 | None:intergenic | 45.0% | |
| ATAAAGTGGGGATAGGATGC+AGG | + | chr8.1:333611-333630 | MS.gene012783:intron | 45.0% | |
| ATACTAACCGCCTTTGATGG+AGG | + | chr8.1:334433-334452 | MS.gene012783:intron | 45.0% | |
| ATATAAGCAGCATACCTCGC+CGG | - | chr8.1:335156-335175 | None:intergenic | 45.0% | |
| ATATCTGCTGAGACTGGACT+TGG | + | chr8.1:332661-332680 | MS.gene012783:CDS | 45.0% | |
| ATATGCAGCAAAGAAGCTCG+CGG | - | chr8.1:333255-333274 | None:intergenic | 45.0% | |
| ATCAAGGAAGAGTCTACTCC+GGG | + | chr8.1:335103-335122 | MS.gene012783:CDS | 45.0% | |
| ATCCTATGAGCAGATTCTGG+AGG | + | chr8.1:335815-335834 | MS.gene012783:CDS | 45.0% | |
| ATGGAGAATGGAACCAGAAG+TGG | - | chr8.1:332398-332417 | None:intergenic | 45.0% | |
| CAAAGGAACGGGTGTGAATT+GGG | + | chr8.1:333731-333750 | MS.gene012783:intron | 45.0% | |
| CAACAGTTCGTTACAGAGTG+GGG | - | chr8.1:333671-333690 | None:intergenic | 45.0% | |
| CAAGACACTCCAATTGTCCT+TGG | + | chr8.1:334511-334530 | MS.gene012783:intron | 45.0% | |
| CAAGAGAGATAAAGGCGACT+TGG | + | chr8.1:336674-336693 | MS.gene012783:CDS | 45.0% | |
| CACAAATTGGCTATAGCGGT+TGG | - | chr8.1:334597-334616 | None:intergenic | 45.0% | |
| CAGACATTCTTGGAAAGACC+AGG | + | chr8.1:336401-336420 | MS.gene012783:CDS | 45.0% | |
| CAGAGGACAAAACTGGAGAA+AGG | + | chr8.1:335056-335075 | MS.gene012783:CDS | 45.0% | |
| CATCCTCTTGATCAGGAAGT+TGG | + | chr8.1:332499-332518 | MS.gene012783:CDS | 45.0% | |
| CCATTGCAGCTAGCAATTGT+AGG | + | chr8.1:332919-332938 | MS.gene012783:CDS | 45.0% | |
| CCCCCGATGATGTATATAAC+AGG | - | chr8.1:333328-333347 | None:intergenic | 45.0% | |
| CCGCTATAGCCAATTTGTGA+AGG | + | chr8.1:334598-334617 | MS.gene012783:intron | 45.0% | |
| CCGGGCTCATATAATTGCTT+TGG | + | chr8.1:335121-335140 | MS.gene012783:CDS | 45.0% | |
| CCTACAATTGCTAGCTGCAA+TGG | - | chr8.1:332922-332941 | None:intergenic | 45.0% | |
| CGATTGCAGATGGCAGTAAA+TGG | - | chr8.1:334676-334695 | None:intergenic | 45.0% | |
| CGCCACTATCCTTCACAAAT+TGG | - | chr8.1:334610-334629 | None:intergenic | 45.0% | |
| CGTGAAGGAGTCGCTAAATT+AGG | + | chr8.1:332325-332344 | MS.gene012783:CDS | 45.0% | |
| CTCAACAGTTCGTTACAGAG+TGG | - | chr8.1:333673-333692 | None:intergenic | 45.0% | |
| CTTAAAGCCACTCTGGCAAT+TGG | - | chr8.1:336642-336661 | None:intergenic | 45.0% | |
| CTTGCTTCAAGCACCTATGT+AGG | - | chr8.1:333885-333904 | None:intergenic | 45.0% | |
| GAACGCTGCATGATCCTTAT+AGG | - | chr8.1:336576-336595 | None:intergenic | 45.0% | |
| GAGGAAGAAGATAGGGAAGT+AGG | + | chr8.1:334452-334471 | MS.gene012783:intron | 45.0% | |
| GCAAGAAGATCGTGTTCTTG+TGG | + | chr8.1:332984-333003 | MS.gene012783:CDS | 45.0% | |
| GCCTGTATCAAGGTGATATC+AGG | - | chr8.1:334874-334893 | None:intergenic | 45.0% | |
| GGTGTGAATTGGGAGAGATA+CGG | + | chr8.1:333741-333760 | MS.gene012783:intron | 45.0% | |
| TAAAGTGGGGATAGGATGCA+GGG | + | chr8.1:333612-333631 | MS.gene012783:intron | 45.0% | |
| TAGCCAAGGCAATTAGAGAG+CGG | - | chr8.1:333801-333820 | None:intergenic | 45.0% | |
| TCCATCAAAGGCGGTTAGTA+TGG | - | chr8.1:334434-334453 | None:intergenic | 45.0% | |
| TCTCTCACTTCAACCTGTCT+TGG | + | chr8.1:332699-332718 | MS.gene012783:CDS | 45.0% | |
| TCTTCTTCCTCCATCAAAGG+CGG | - | chr8.1:334443-334462 | None:intergenic | 45.0% | |
| TGAACTTCAGGCCTGTATCA+AGG | - | chr8.1:334884-334903 | None:intergenic | 45.0% | |
| TGGTCTTCATCCTCTTGATC+AGG | + | chr8.1:332492-332511 | MS.gene012783:CDS | 45.0% | |
| TTGCAGATGGCAGTAAATGG+TGG | - | chr8.1:334673-334692 | None:intergenic | 45.0% | |
| TTGGTTGCAGAGGACAAAAC+TGG | + | chr8.1:335049-335068 | MS.gene012783:CDS | 45.0% | |
| ! | AGACAGACAAGTGCTGTTCT+TGG | + | chr8.1:334751-334770 | MS.gene012783:intron | 45.0% |
| ! | AGATGGCAGTAAATGGTGGA+AGG | - | chr8.1:334669-334688 | None:intergenic | 45.0% |
| ! | AGTAATGGGACACATCATGG+AGG | - | chr8.1:334317-334336 | None:intergenic | 45.0% |
| ! | ATTTCAGCATTGGAGGGAAG+GGG | + | chr8.1:336191-336210 | MS.gene012783:CDS | 45.0% |
| ! | CAATTGCCAGAGTGGCTTTA+AGG | + | chr8.1:336640-336659 | MS.gene012783:CDS | 45.0% |
| ! | CATTTCAGCATTGGAGGGAA+GGG | + | chr8.1:336190-336209 | MS.gene012783:CDS | 45.0% |
| ! | CATTTGTTGCGTTTGTGCAC+GGG | + | chr8.1:336475-336494 | MS.gene012783:CDS | 45.0% |
| ! | GAAATGTCCCGTTTAGGGTT+TGG | + | chr8.1:332625-332644 | MS.gene012783:CDS | 45.0% |
| ! | GATTTGGAGCTGATCATGCT+AGG | - | chr8.1:333368-333387 | None:intergenic | 45.0% |
| ! | GGCGATATGGTGTTTTATGG+TGG | + | chr8.1:334626-334645 | MS.gene012783:intron | 45.0% |
| ! | TCACCTGCGTTTCAGAGTTT+TGG | + | chr8.1:332348-332367 | MS.gene012783:CDS | 45.0% |
| ! | TCAGCGTTATCGATTGCAGA+TGG | - | chr8.1:334686-334705 | None:intergenic | 45.0% |
| ! | TCATTTCAGCATTGGAGGGA+AGG | + | chr8.1:336189-336208 | MS.gene012783:CDS | 45.0% |
| ! | TGTGAAGGATAGTGGCGATA+TGG | + | chr8.1:334613-334632 | MS.gene012783:intron | 45.0% |
| !! | ACTCGAGGTGTTGAATCTGA+TGG | + | chr8.1:334814-334833 | MS.gene012783:intron | 45.0% |
| !! | AGGCGACTTGGTTGAATCAA+AGG | + | chr8.1:336686-336705 | MS.gene012783:CDS | 45.0% |
| !! | AGTCCAAAACTCTGAAACGC+AGG | - | chr8.1:332354-332373 | None:intergenic | 45.0% |
| !! | TAACGAACTGTTGAGTTGGC+TGG | + | chr8.1:333678-333697 | MS.gene012783:intron | 45.0% |
| !! | TGAAAACTAAGGGGTGTCCT+CGG | - | chr8.1:334840-334859 | None:intergenic | 45.0% |
| !! | TTCAGGTTGATACTGCTGGT+TGG | + | chr8.1:335030-335049 | MS.gene012783:intron | 45.0% |
| !!! | AGTTTTGGACTCTGCTGGTT+TGG | + | chr8.1:332363-332382 | MS.gene012783:CDS | 45.0% |
| !!! | TAGGGGTTTTCTGGTCTTGT+TGG | - | chr8.1:333568-333587 | None:intergenic | 45.0% |
| !!! | TCTCCCGGTTGTTTTTGATC+AGG | + | chr8.1:336371-336390 | MS.gene012783:intron | 45.0% |
| !!! | TTCAGAGTTTTGGACTCTGC+TGG | + | chr8.1:332358-332377 | MS.gene012783:CDS | 45.0% |
| AAGCCACTCTGGCAATTGGA+TGG | - | chr8.1:336638-336657 | None:intergenic | 50.0% | |
| AGAGGGACATGTTTGAAGGG+AGG | + | chr8.1:334367-334386 | MS.gene012783:intron | 50.0% | |
| AGCCTCCAGAATCTGCTCAT+AGG | - | chr8.1:335820-335839 | None:intergenic | 50.0% | |
| AGCGAGATTGCATATCGCCA+AGG | - | chr8.1:333280-333299 | None:intergenic | 50.0% | |
| AGTGCAGATTTGCCGACGTT+AGG | - | chr8.1:332232-332251 | None:intergenic | 50.0% | |
| ATTACGGCCATGGCAGATTG+GGG | + | chr8.1:334558-334577 | MS.gene012783:intron | 50.0% | |
| ATTGTAGGACGCCCCAATGT+TGG | + | chr8.1:332934-332953 | MS.gene012783:CDS | 50.0% | |
| CAGATTTGCCGACGTTAGGT+CGG | - | chr8.1:332228-332247 | None:intergenic | 50.0% | |
| CCTGATGCAAGACGGTTGTA+CGG | - | chr8.1:336217-336236 | None:intergenic | 50.0% | |
| CTACAGCTCGTCTTAACCGT+TGG | + | chr8.1:336273-336292 | MS.gene012783:CDS | 50.0% | |
| GAGATACGGCCGGAAATAGT+TGG | + | chr8.1:333755-333774 | MS.gene012783:intron | 50.0% | |
| GAGGATAGAATGGAGACCTC+AGG | + | chr8.1:334386-334405 | MS.gene012783:intron | 50.0% | |
| GCAAAGGAACGGGTGTGAAT+TGG | + | chr8.1:333730-333749 | MS.gene012783:intron | 50.0% | |
| GGTTAGTGCATGAGATGCGA+TGG | + | chr8.1:333949-333968 | MS.gene012783:intron | 50.0% | |
| TAGCCATCCAATTGCCAGAG+TGG | + | chr8.1:336632-336651 | MS.gene012783:CDS | 50.0% | |
| TAGTGCATGAGATGCGATGG+TGG | + | chr8.1:333952-333971 | MS.gene012783:intron | 50.0% | |
| TCTCTTGTGAGACCAGCTTC+AGG | - | chr8.1:333012-333031 | None:intergenic | 50.0% | |
| TGAATTGGGAGAGATACGGC+CGG | + | chr8.1:333745-333764 | MS.gene012783:intron | 50.0% | |
| TGACCGCTCTCTAATTGCCT+TGG | + | chr8.1:333795-333814 | MS.gene012783:intron | 50.0% | |
| TTCCTCACTGATGCTAGAGC+TGG | + | chr8.1:332472-332491 | MS.gene012783:CDS | 50.0% | |
| TTGGAAGCTGAAGCCACTTC+TGG | + | chr8.1:332382-332401 | MS.gene012783:CDS | 50.0% | |
| ! | ATACTGCTGGTTGGTTGCAG+AGG | + | chr8.1:335039-335058 | MS.gene012783:CDS | 50.0% |
| ! | GGAACTAGTCTCATCATCGC+AGG | - | chr8.1:332875-332894 | None:intergenic | 50.0% |
| ! | GGGCTAGTGGGTGTGTTATT+TGG | + | chr8.1:333705-333724 | MS.gene012783:intron | 50.0% |
| ! | TGATGAGACTAGTTCCCCTG+AGG | + | chr8.1:332879-332898 | MS.gene012783:CDS | 50.0% |
| !! | AACTGTTGAGTTGGCTGGAG+GGG | + | chr8.1:333683-333702 | MS.gene012783:intron | 50.0% |
| !! | AAGGCTCGATAGTTCTAGGG+TGG | + | chr8.1:335413-335432 | MS.gene012783:intron | 50.0% |
| !! | GAACTGTTGAGTTGGCTGGA+GGG | + | chr8.1:333682-333701 | MS.gene012783:intron | 50.0% |
| !! | GCCATTCAGGTTGATACTGC+TGG | + | chr8.1:335026-335045 | MS.gene012783:intron | 50.0% |
| AAGACCACGTCCCTCTTCCA+CGG | - | chr8.1:335745-335764 | None:intergenic | 55.0% | |
| AGGTCGGCCGAGAATGATGA+CGG | - | chr8.1:332212-332231 | None:intergenic | 55.0% | |
| AGTTATAGCCAGACGAGCCG+TGG | + | chr8.1:335725-335744 | MS.gene012783:CDS | 55.0% | |
| ATTCTCGGCCGACCTAACGT+CGG | + | chr8.1:332217-332236 | MS.gene012783:CDS | 55.0% | |
| CCGTACAACCGTCTTGCATC+AGG | + | chr8.1:336214-336233 | MS.gene012783:CDS | 55.0% | |
| CGACTCCTTCACGAATGTCG+CGG | - | chr8.1:332318-332337 | None:intergenic | 55.0% | |
| CTCCCCACCGTCATCATTCT+CGG | + | chr8.1:332202-332221 | MS.gene012783:CDS | 55.0% | |
| GACTCCTTCACGAATGTCGC+GGG | - | chr8.1:332317-332336 | None:intergenic | 55.0% | |
| GTTCTTGTGGGTCCTGAAGC+TGG | + | chr8.1:332997-333016 | MS.gene012783:CDS | 55.0% | |
| GTTTGCTTTCGTCCGCCTCA+GGG | - | chr8.1:332897-332916 | None:intergenic | 55.0% | |
| TGATCTTAGGCTGTGCTGCC+TGG | - | chr8.1:336422-336441 | None:intergenic | 55.0% | |
| TTTGCTTTCGTCCGCCTCAG+GGG | - | chr8.1:332896-332915 | None:intergenic | 55.0% | |
| TTTGGTACTAGATGCCGGCG+AGG | + | chr8.1:335139-335158 | MS.gene012783:CDS | 55.0% | |
| ! | AACCTCTACTGAAGGTGCGG+CGG | - | chr8.1:332129-332148 | None:intergenic | 55.0% |
| ! | AGTTTGCTTTCGTCCGCCTC+AGG | - | chr8.1:332898-332917 | None:intergenic | 55.0% |
| ! | GACCAGCTCTAGCATCAGTG+AGG | - | chr8.1:332477-332496 | None:intergenic | 55.0% |
| ! | GGTGTTGAATCTGATGGCCG+AGG | + | chr8.1:334820-334839 | MS.gene012783:intron | 55.0% |
| ! | TGAGACTAGTTCCCCTGAGG+CGG | + | chr8.1:332882-332901 | MS.gene012783:CDS | 55.0% |
| !! | ACTGTTGAGTTGGCTGGAGG+GGG | + | chr8.1:333684-333703 | MS.gene012783:intron | 55.0% |
| !! | CGAACTGTTGAGTTGGCTGG+AGG | + | chr8.1:333681-333700 | MS.gene012783:intron | 55.0% |
| ACTGCCACCCCAATCTGCCA+TGG | - | chr8.1:334568-334587 | None:intergenic | 60.0% | |
| GTCACCCGCGACATTCGTGA+AGG | + | chr8.1:332310-332329 | MS.gene012783:CDS | 60.0% | |
| GTCGCGGGTGACATGATCGT+CGG | - | chr8.1:332302-332321 | None:intergenic | 60.0% | |
| TCGCGGGTGACATGATCGTC+GGG | - | chr8.1:332301-332320 | None:intergenic | 60.0% | |
| ! | ACCTCTACTGAAGGTGCGGC+GGG | - | chr8.1:332128-332147 | None:intergenic | 60.0% |
| !! | CGGCCGAGAATGATGACGGT+GGG | - | chr8.1:332208-332227 | None:intergenic | 60.0% |
| !! | CTGTTGAGTTGGCTGGAGGG+GGG | + | chr8.1:333685-333704 | MS.gene012783:intron | 60.0% |
| !! | GGCCGAGAATGATGACGGTG+GGG | - | chr8.1:332207-332226 | None:intergenic | 60.0% |
| !! | TCGGCCGAGAATGATGACGG+TGG | - | chr8.1:332209-332228 | None:intergenic | 60.0% |
| ACCCGCCGCACCTTCAGTAG+AGG | + | chr8.1:332124-332143 | MS.gene012783:CDS | 65.0% | |
| ACGGCCATGGCAGATTGGGG+TGG | + | chr8.1:334561-334580 | MS.gene012783:intron | 65.0% | |
| AGCCAGACGAGCCGTGGAAG+AGG | + | chr8.1:335731-335750 | MS.gene012783:CDS | 65.0% | |
| GCCAGACGAGCCGTGGAAGA+GGG | + | chr8.1:335732-335751 | MS.gene012783:CDS | 65.0% | |
| TCCCTCTTCCACGGCTCGTC+TGG | - | chr8.1:335736-335755 | None:intergenic | 65.0% | |
| TGCGGCGGGTCCACCAGAAA+AGG | - | chr8.1:332114-332133 | None:intergenic | 65.0% | |
| ! | TTGGCTGGAGGGGGGCTAGT+GGG | + | chr8.1:333693-333712 | MS.gene012783:intron | 65.0% |
| CGAGCCGTGGAAGAGGGACG+TGG | + | chr8.1:335738-335757 | MS.gene012783:CDS | 70.0% | |
| GTTGGCTGGAGGGGGGCTAG+TGG | + | chr8.1:333692-333711 | MS.gene012783:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 332091 | 336713 | 332091 | ID=MS.gene012783 |
| chr8.1 | mRNA | 332091 | 336713 | 332091 | ID=MS.gene012783.t1;Parent=MS.gene012783 |
| chr8.1 | exon | 332091 | 332748 | 332091 | ID=MS.gene012783.t1.exon1;Parent=MS.gene012783.t1 |
| chr8.1 | CDS | 332091 | 332748 | 332091 | ID=cds.MS.gene012783.t1;Parent=MS.gene012783.t1 |
| chr8.1 | exon | 332851 | 333077 | 332851 | ID=MS.gene012783.t1.exon2;Parent=MS.gene012783.t1 |
| chr8.1 | CDS | 332851 | 333077 | 332851 | ID=cds.MS.gene012783.t1;Parent=MS.gene012783.t1 |
| chr8.1 | exon | 335035 | 335160 | 335035 | ID=MS.gene012783.t1.exon3;Parent=MS.gene012783.t1 |
| chr8.1 | CDS | 335035 | 335160 | 335035 | ID=cds.MS.gene012783.t1;Parent=MS.gene012783.t1 |
| chr8.1 | exon | 335687 | 335872 | 335687 | ID=MS.gene012783.t1.exon4;Parent=MS.gene012783.t1 |
| chr8.1 | CDS | 335687 | 335872 | 335687 | ID=cds.MS.gene012783.t1;Parent=MS.gene012783.t1 |
| chr8.1 | exon | 336167 | 336304 | 336167 | ID=MS.gene012783.t1.exon5;Parent=MS.gene012783.t1 |
| chr8.1 | CDS | 336167 | 336304 | 336167 | ID=cds.MS.gene012783.t1;Parent=MS.gene012783.t1 |
| chr8.1 | exon | 336393 | 336713 | 336393 | ID=MS.gene012783.t1.exon6;Parent=MS.gene012783.t1 |
| chr8.1 | CDS | 336393 | 336713 | 336393 | ID=cds.MS.gene012783.t1;Parent=MS.gene012783.t1 |
| Gene Sequence |
| Protein sequence |
