AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene013875

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013875.t1 MTR_7g087410 96.748 492 14 1 1 490 1 492 0.0 954
MS.gene013875.t1 MTR_7g087410 97.519 403 10 0 88 490 1 403 0.0 793
MS.gene013875.t1 MTR_7g087400 70.868 484 139 2 2 485 3 484 0.0 719
MS.gene013875.t1 MTR_6g027200 66.667 492 158 4 2 488 6 496 0.0 650
MS.gene013875.t1 MTR_7g087430 79.798 396 79 1 88 483 1 395 0.0 637
MS.gene013875.t1 MTR_7g087370 64.754 488 141 3 2 489 3 459 0.0 635
MS.gene013875.t1 MTR_6g027190 66.526 475 150 3 1 474 3 469 0.0 601
MS.gene013875.t1 MTR_5g032720 49.367 474 237 2 10 482 17 488 2.25e-167 481
MS.gene013875.t1 MTR_3g099700 47.746 488 247 2 2 481 12 499 8.38e-162 468
MS.gene013875.t1 MTR_5g032750 46.875 480 251 4 4 481 12 489 2.22e-159 461
MS.gene013875.t1 MTR_1g021740 46.895 467 248 0 15 481 21 487 6.29e-151 439
MS.gene013875.t1 MTR_8g069470 46.239 452 243 0 22 473 43 494 1.09e-150 440
MS.gene013875.t1 MTR_3g099720 46.996 466 243 1 17 482 29 490 3.09e-147 430
MS.gene013875.t1 MTR_1g100180 43.673 490 266 3 1 490 21 500 2.87e-146 428
MS.gene013875.t1 MTR_5g033100 45.652 460 250 0 30 489 57 516 9.98e-144 422
MS.gene013875.t1 MTR_4g048000 45.833 456 242 2 25 475 56 511 2.25e-138 409
MS.gene013875.t1 MTR_2g088400 45.815 454 245 1 23 475 46 499 5.59e-136 402
MS.gene013875.t1 MTR_2g022980 42.029 483 272 3 1 475 13 495 1.18e-132 393
MS.gene013875.t1 MTR_6g047640 40.042 477 279 2 5 475 1 476 2.33e-122 367
MS.gene013875.t1 MTR_6g047610 39.413 477 281 4 5 475 1 475 4.46e-122 366
MS.gene013875.t1 MTR_2g088400 43.578 436 232 2 12 433 22 457 1.05e-116 351
MS.gene013875.t1 MTR_6g047640 37.736 477 271 3 5 475 1 457 5.52e-115 347
MS.gene013875.t1 MTR_5g090290 42.605 453 259 1 30 481 47 499 1.50e-112 344
MS.gene013875.t1 MTR_6g047590 38.641 471 280 3 10 473 5 473 2.92e-110 335
MS.gene013875.t1 MTR_8g063590 36.534 479 289 5 6 471 21 497 2.05e-96 300
MS.gene013875.t1 MTR_6g081410 35.625 480 300 5 4 478 2 477 1.50e-93 292
MS.gene013875.t1 MTR_6g081780 35.477 482 299 6 4 480 2 476 6.62e-91 285
MS.gene013875.t1 MTR_7g082810 37.473 459 284 2 29 484 20 478 9.97e-89 280
MS.gene013875.t1 MTR_1g108810 35.294 442 285 1 25 465 30 471 1.64e-87 277
MS.gene013875.t1 MTR_6g066380 35.729 473 295 5 4 470 2 471 8.24e-87 275
MS.gene013875.t1 MTR_6g081300 34.746 472 299 7 21 487 1 468 4.44e-86 273
MS.gene013875.t1 MTR_5g087930 37.731 432 245 5 54 482 51 461 7.74e-85 269
MS.gene013875.t1 MTR_6g004220 33.755 474 302 4 1 470 1 466 1.88e-82 263
MS.gene013875.t1 MTR_8g106670 33.476 466 297 4 10 472 1 456 4.90e-82 262
MS.gene013875.t1 MTR_6g081810 35.319 470 266 8 3 470 10 443 6.81e-81 259
MS.gene013875.t1 MTR_6g081390 33.769 459 296 6 25 478 8 463 1.33e-79 256
MS.gene013875.t1 MTR_6g081240 33.871 434 283 3 32 463 14 445 1.41e-79 255
MS.gene013875.t1 MTR_6g004220 33.689 469 297 5 2 463 5 466 4.16e-79 255
MS.gene013875.t1 MTR_6g081400 32.743 452 298 4 25 472 11 460 1.12e-78 253
MS.gene013875.t1 MTR_2g078930 34.498 458 287 4 12 461 24 476 2.17e-76 248
MS.gene013875.t1 MTR_2g079020 33.921 454 291 3 16 461 18 470 2.46e-76 248
MS.gene013875.t1 MTR_1g108840 33.054 478 310 5 1 470 8 483 6.64e-76 247
MS.gene013875.t1 MTR_2g078960 35.484 434 279 1 29 461 33 466 2.97e-74 242
MS.gene013875.t1 MTR_2g078970 34.437 453 288 3 17 461 13 464 3.65e-72 237
MS.gene013875.t1 MTR_1g109060 33.405 467 309 2 5 470 1 466 5.14e-72 236
MS.gene013875.t1 MTR_1g108990 32.558 473 308 4 11 474 1 471 8.29e-72 236
MS.gene013875.t1 MTR_6g081310 33.921 454 278 5 51 485 18 468 2.01e-71 234
MS.gene013875.t1 MTR_1g109060 33.405 467 308 3 5 470 1 465 8.62e-70 231
MS.gene013875.t1 MTR_5g090280 34.977 426 234 8 88 481 1 415 6.91e-68 224
MS.gene013875.t1 MTR_7g082800 33.594 384 254 1 88 470 1 384 8.22e-67 220
MS.gene013875.t1 MTR_3g111020 27.823 496 317 9 16 487 35 513 1.68e-54 192
MS.gene013875.t1 MTR_6g004220 31.250 400 261 5 2 394 5 397 5.81e-54 188
MS.gene013875.t1 MTR_0039s0080 28.416 461 318 5 37 490 46 501 7.94e-54 189
MS.gene013875.t1 MTR_5g010830 28.333 480 323 8 2 468 34 505 1.44e-53 189
MS.gene013875.t1 MTR_1g101500 28.508 449 312 3 37 480 72 516 5.33e-53 187
MS.gene013875.t1 MTR_5g067460 25.268 467 332 4 25 482 51 509 6.27e-50 179
MS.gene013875.t1 MTR_2g078990 34.364 291 188 2 173 461 4 293 7.75e-46 162
MS.gene013875.t1 MTR_4g027920 25.597 461 335 3 26 483 153 608 1.77e-45 168
MS.gene013875.t1 MTR_6g043810 24.797 492 328 8 26 490 20 496 7.75e-43 159
MS.gene013875.t1 MTR_6g043810 24.845 483 339 7 26 490 30 506 8.35e-43 159
MS.gene013875.t1 MTR_2g079030 38.860 193 118 0 267 459 319 511 4.33e-35 138
MS.gene013875.t1 MTR_6g004220 29.467 319 211 5 2 313 5 316 9.66e-35 133
MS.gene013875.t1 MTR_2g435930 23.722 489 340 5 15 480 5 483 4.37e-34 134
MS.gene013875.t1 MTR_6g088805 24.619 459 331 5 14 467 15 463 8.70e-33 130
MS.gene013875.t1 MTR_5g011540 25.911 494 335 8 15 490 28 508 1.10e-30 125
MS.gene013875.t1 MTR_8g102430 23.950 476 312 10 7 467 2 442 8.48e-30 121
MS.gene013875.t1 MTR_4g131290 38.983 59 36 0 101 159 13 71 9.24e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene013875.t1 AT1G33110 62.917 480 175 1 4 480 7 486 0.0 638
MS.gene013875.t1 AT1G33100 61.426 477 184 0 4 480 7 483 0.0 628
MS.gene013875.t1 AT1G33090 61.042 480 184 1 4 480 7 486 0.0 611
MS.gene013875.t1 AT1G33080 59.504 484 193 1 2 482 5 488 0.0 607
MS.gene013875.t1 AT1G33080 60.645 465 180 1 2 463 5 469 0.0 592
MS.gene013875.t1 AT1G33110 64.484 397 138 1 4 397 7 403 0.0 525
MS.gene013875.t1 AT5G44050 47.023 487 248 2 2 478 3 489 9.62e-161 465
MS.gene013875.t1 AT5G65380 48.504 468 240 1 9 475 16 483 6.50e-160 462
MS.gene013875.t1 AT1G47530 46.407 487 253 2 1 482 1 484 2.53e-151 441
MS.gene013875.t1 AT1G12950 46.608 457 243 1 30 486 67 522 3.14e-146 429
MS.gene013875.t1 AT5G10420 47.458 472 247 1 10 480 18 489 7.33e-146 427
MS.gene013875.t1 AT3G26590 44.536 485 256 3 2 473 4 488 1.75e-145 426
MS.gene013875.t1 AT4G00350 46.171 444 238 1 30 473 88 530 2.01e-145 427
MS.gene013875.t1 AT5G17700 44.196 491 264 2 4 484 7 497 1.39e-144 424
MS.gene013875.t1 AT5G17700 44.196 491 264 2 4 484 7 497 1.39e-144 424
MS.gene013875.t1 AT1G23300 44.813 482 260 2 13 490 23 502 5.22e-144 423
MS.gene013875.t1 AT5G38030 45.133 452 247 1 30 481 45 495 2.58e-141 416
MS.gene013875.t1 AT1G61890 45.397 478 249 3 18 490 31 501 3.90e-141 415
MS.gene013875.t1 AT1G11670 45.175 487 253 4 3 475 10 496 2.09e-140 413
MS.gene013875.t1 AT3G03620 44.864 477 260 2 16 490 21 496 5.63e-140 412
MS.gene013875.t1 AT3G03620 44.864 477 260 2 16 490 21 496 5.63e-140 412
MS.gene013875.t1 AT1G61890 46.903 452 235 2 18 464 31 482 3.55e-137 405
MS.gene013875.t1 AT4G25640 44.353 487 260 3 4 482 2 485 5.89e-135 399
MS.gene013875.t1 AT4G25640 44.353 487 260 3 4 482 2 485 1.71e-134 399
MS.gene013875.t1 AT3G21690 46.930 456 241 1 21 475 43 498 2.49e-134 398
MS.gene013875.t1 AT1G47530 49.620 395 196 1 88 482 1 392 1.50e-133 392
MS.gene013875.t1 AT4G21910 43.226 465 254 4 18 475 39 500 1.16e-128 384
MS.gene013875.t1 AT4G21910 43.226 465 254 4 18 475 39 500 1.16e-128 384
MS.gene013875.t1 AT3G26590 47.409 386 203 0 88 473 1 386 4.99e-128 378
MS.gene013875.t1 AT4G21910 42.373 472 264 4 7 475 36 502 2.09e-127 380
MS.gene013875.t1 AT4G21910 42.373 472 264 4 7 475 36 502 2.09e-127 380
MS.gene013875.t1 AT1G61890 46.731 413 215 2 18 425 31 443 1.24e-121 364
MS.gene013875.t1 AT4G25640 44.851 437 230 3 4 432 2 435 6.52e-121 362
MS.gene013875.t1 AT4G21903 43.349 436 231 3 50 477 73 500 3.04e-119 359
MS.gene013875.t1 AT5G17700 44.557 395 218 1 4 397 7 401 8.95e-115 344
MS.gene013875.t1 AT4G21903 41.722 453 244 4 50 490 73 517 1.34e-114 348
MS.gene013875.t1 AT3G59030 40.260 462 268 4 27 486 49 504 1.82e-114 347
MS.gene013875.t1 AT4G21903 44.730 389 214 1 88 475 1 389 3.27e-113 340
MS.gene013875.t1 AT5G52450 35.642 491 292 6 2 485 9 482 1.93e-88 279
MS.gene013875.t1 AT2G34360 34.440 482 282 9 15 477 3 469 3.31e-84 268
MS.gene013875.t1 AT1G73700 35.174 489 299 5 1 484 1 476 4.40e-84 268
MS.gene013875.t1 AT3G59030 38.482 369 225 2 27 394 49 416 1.42e-83 265
MS.gene013875.t1 AT1G15150 36.364 462 277 8 30 482 31 484 4.98e-80 257
MS.gene013875.t1 AT1G66780 35.831 427 269 4 47 470 52 476 2.16e-77 250
MS.gene013875.t1 AT1G15160 35.281 462 282 8 30 482 31 484 2.40e-77 250
MS.gene013875.t1 AT1G71140 33.404 473 302 6 4 470 2 467 2.94e-77 250
MS.gene013875.t1 AT1G66760 34.369 483 290 9 1 470 1 469 4.38e-77 249
MS.gene013875.t1 AT1G66760 34.519 478 286 9 1 465 1 464 1.63e-75 245
MS.gene013875.t1 AT1G15170 35.000 480 294 8 2 470 3 475 5.35e-75 244
MS.gene013875.t1 AT1G64820 32.599 454 295 6 37 484 36 484 3.77e-73 240
MS.gene013875.t1 AT2G04080 32.704 477 300 7 1 470 6 468 7.87e-73 238
MS.gene013875.t1 AT2G04040 32.883 444 293 3 30 470 27 468 1.32e-70 233
MS.gene013875.t1 AT2G04080 32.558 473 298 7 1 466 6 464 2.20e-70 232
MS.gene013875.t1 AT1G15180 35.938 448 274 6 30 470 35 476 8.92e-69 228
MS.gene013875.t1 AT2G04070 33.708 445 288 5 30 470 27 468 8.10e-68 225
MS.gene013875.t1 AT3G23560 34.783 437 278 3 29 461 38 471 8.56e-68 225
MS.gene013875.t1 AT2G34360 31.447 477 261 9 15 477 3 427 1.11e-67 224
MS.gene013875.t1 AT3G23550 32.949 434 290 1 29 461 30 463 8.66e-67 222
MS.gene013875.t1 AT2G04050 31.692 467 300 5 17 470 8 468 9.98e-65 217
MS.gene013875.t1 AT1G15150 35.580 371 229 5 119 482 1 368 2.66e-64 213
MS.gene013875.t1 AT2G04100 32.812 448 288 6 30 470 30 471 4.99e-63 213
MS.gene013875.t1 AT1G15170 36.212 359 219 5 119 470 1 356 6.37e-62 206
MS.gene013875.t1 AT2G04100 32.735 446 287 6 30 468 30 469 1.90e-61 208
MS.gene013875.t1 AT2G04090 32.222 450 288 6 30 470 30 471 5.90e-61 207
MS.gene013875.t1 AT1G66760 34.795 342 210 5 131 465 1 336 2.31e-53 183
MS.gene013875.t1 AT1G66760 32.924 407 246 9 1 394 1 393 1.54e-50 177
MS.gene013875.t1 AT3G23560 34.865 370 234 3 29 394 38 404 7.89e-50 176
MS.gene013875.t1 AT2G38510 25.376 465 335 5 26 483 2 461 8.46e-50 177
MS.gene013875.t1 AT1G58340 25.843 445 321 3 29 468 57 497 9.10e-45 165
MS.gene013875.t1 AT5G19700 26.369 493 342 6 6 486 9 492 1.88e-40 152
MS.gene013875.t1 AT1G71870 22.587 487 354 6 25 490 19 503 1.40e-38 147
MS.gene013875.t1 AT5G52050 24.272 515 346 6 3 490 8 505 2.30e-38 146
MS.gene013875.t1 AT4G29140 25.847 472 327 9 6 467 36 494 1.87e-37 144
MS.gene013875.t1 AT4G23030 26.694 487 340 7 7 484 10 488 6.31e-36 140
MS.gene013875.t1 AT1G15180 34.629 283 175 5 119 394 1 280 1.94e-35 137
MS.gene013875.t1 AT5G49130 25.316 474 335 4 25 481 21 492 5.05e-34 134
MS.gene013875.t1 AT2G04066 39.844 128 77 0 343 470 36 163 6.32e-27 107
MS.gene013875.t1 AT4G22790 25.833 480 316 13 13 467 6 470 1.61e-25 109

Find 96 sgRNAs with CRISPR-Local

Find 187 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAATGATTTCAACTATTT+TGG 0.128485 7.1:-18337734 MS.gene013875:CDS
TTGACAATGAAATACGAATT+TGG 0.132006 7.1:-18337766 MS.gene013875:CDS
ATGAGTTATCACTAGGAAAA+AGG 0.222046 7.1:-18339271 MS.gene013875:CDS
GAACACCATCATTGCATTCT+TGG 0.238540 7.1:-18337830 MS.gene013875:CDS
ATTCCTGTTGGGGTTGTTCT+TGG 0.263732 7.1:-18336391 MS.gene013875:CDS
ACAATAAAAGCAAACATAAT+TGG 0.272274 7.1:+18337892 None:intergenic
GAGGAATGCATGAATAATTA+TGG 0.285003 7.1:+18337798 None:intergenic
GATGATATCACTTGGTTTCA+TGG 0.286945 7.1:-18337026 MS.gene013875:CDS
TGACAATGAAATACGAATTT+GGG 0.314225 7.1:-18337765 MS.gene013875:CDS
GCATATGGTGCAAAAGAATA+TGG 0.321833 7.1:-18338072 MS.gene013875:CDS
AAATTGATGCATTATCTATA+TGG 0.322864 7.1:-18337214 MS.gene013875:intron
TGGCCTAAGAGAGTCAAAAT+TGG 0.339582 7.1:+18337964 None:intergenic
TTGCAGGAAACATCTCTCTT+TGG 0.351337 7.1:-18337921 MS.gene013875:CDS
ATCTGGATGGGAATGTTGTT+TGG 0.361940 7.1:-18336144 MS.gene013875:CDS
GCTATGGTACAACACAATAT+TGG 0.365741 7.1:-18337273 MS.gene013875:CDS
TTATTCATGCATTCCTCTCT+TGG 0.371620 7.1:-18337792 MS.gene013875:CDS
GGCCTAAGAGAGTCAAAATT+GGG 0.375165 7.1:+18337965 None:intergenic
ACATCATAGGTATTCCTGTT+GGG 0.378560 7.1:-18336402 MS.gene013875:CDS
ATAGGTTGTTATTACATCAT+AGG 0.385071 7.1:-18336415 MS.gene013875:CDS
TAATCACCTACAAAACCAAC+TGG 0.393658 7.1:-18336092 MS.gene013875:CDS
ATTTCAACAGGAGTGGCAAT+TGG 0.399246 7.1:-18336472 MS.gene013875:intron
GAAAATCTTGTGAATATTGC+TGG 0.419464 7.1:+18339209 None:intergenic
ACTGCATTGGCGACCCTTTG+TGG 0.422921 7.1:-18338099 MS.gene013875:CDS
AAATATGAGTTGACCAATGT+TGG 0.433777 7.1:+18337699 None:intergenic
CTTCTGATATGCTTTCATCT+TGG 0.434393 7.1:+18337944 None:intergenic
GTCAAACTTTCCCTTTCAGC+TGG 0.437394 7.1:-18337604 MS.gene013875:CDS
TTTGTGATTGAAGGAATGTT+TGG 0.439478 7.1:+18337857 None:intergenic
ACAGGAGTGGCAATTGGAGC+AGG 0.444328 7.1:-18336466 MS.gene013875:intron
CAACATTGCACCAGCTGAAA+GGG 0.447324 7.1:+18337594 None:intergenic
GAAGAAGAACAAGTGCAGTT+AGG 0.451597 7.1:+18338007 None:intergenic
ACCCTTTGTGGACAAGCATA+TGG 0.455701 7.1:-18338087 MS.gene013875:CDS
TGTTCTTGCTTTGTGATTGA+AGG 0.457141 7.1:+18337848 None:intergenic
GAGAAACCTTGCCAAGTCTC+AGG 0.471152 7.1:+18337658 None:intergenic
TGCGGCCACCTCTTTATTCG+AGG 0.471701 7.1:+18336755 None:intergenic
TTACCAAGAACAACCCCAAC+AGG 0.474968 7.1:+18336388 None:intergenic
ATGAATATTGTAGTTGGGAA+TGG 0.482830 7.1:-18338124 MS.gene013875:intron
TAGCTCGCAAGCGTGTAAAC+AGG 0.483098 7.1:-18335947 MS.gene013875:CDS
AAATACGAATTTGGGATTGC+TGG 0.485502 7.1:-18337757 MS.gene013875:CDS
GGAATGAAACAAAGCTTATG+TGG 0.489956 7.1:-18339244 MS.gene013875:CDS
GAGTATATCTTCAAAGATCA+TGG 0.493939 7.1:-18338041 MS.gene013875:CDS
TGCAAAAGAATATGGAATGA+TGG 0.495159 7.1:-18338064 MS.gene013875:CDS
TTCTTGGTAATGTTATCCAT+TGG 0.504552 7.1:-18336375 MS.gene013875:CDS
TATTATGCAGTCTTGAGCTA+TGG 0.507079 7.1:-18337289 MS.gene013875:intron
AATATGAGTTGACCAATGTT+GGG 0.515656 7.1:+18337700 None:intergenic
ATTAACAGTCTCAACATCAA+TGG 0.515679 7.1:-18337058 MS.gene013875:intron
TGTGACAGTGCTTACGTCGT+TGG 0.516527 7.1:-18336841 MS.gene013875:CDS
CATCATAGGTATTCCTGTTG+GGG 0.518377 7.1:-18336401 MS.gene013875:CDS
TACATCATAGGTATTCCTGT+TGG 0.519474 7.1:-18336403 MS.gene013875:CDS
GTATCAAATGAGCTTGGTAA+AGG 0.521672 7.1:-18336894 MS.gene013875:CDS
CAAAACCAACTGGGATGAGC+AGG 0.522487 7.1:-18336082 MS.gene013875:intron
ACCATATGCTTGTCCACAAA+GGG 0.523264 7.1:+18338086 None:intergenic
TACTTTGTACCTGAGAGTAC+TGG 0.525061 7.1:+18336675 None:intergenic
TTTCGATAGGGTATCTGGAT+GGG 0.528960 7.1:-18336156 MS.gene013875:intron
ACAGTCTCAACATCAATGGA+TGG 0.534228 7.1:-18337054 MS.gene013875:intron
TTTCAGCTGGTGCAATGTTG+TGG 0.537720 7.1:-18337591 MS.gene013875:intron
CACCATATGCTTGTCCACAA+AGG 0.545263 7.1:+18338085 None:intergenic
GAAAGCATATCAGAAGTTGC+AGG 0.546308 7.1:-18337937 MS.gene013875:CDS
TCATATTTGTTACATGTGGT+TGG 0.546428 7.1:-18337684 MS.gene013875:CDS
TGGTGTCCTGAGACTTGGCA+AGG 0.562901 7.1:-18337664 MS.gene013875:CDS
GAAAGGGAAAGTTTGACGAC+AGG 0.566650 7.1:+18337610 None:intergenic
TCATACCTGCTCATCCCAGT+TGG 0.566874 7.1:+18336077 None:intergenic
GTGGTTGGTGTCCTGAGACT+TGG 0.570911 7.1:-18337669 MS.gene013875:CDS
AGCTGCCAAGAATGCAATGA+TGG 0.574760 7.1:+18337825 None:intergenic
CAGTCTCAACATCAATGGAT+GGG 0.575086 7.1:-18337053 MS.gene013875:CDS
ACAACATTGCACCAGCTGAA+AGG 0.577683 7.1:+18337593 None:intergenic
AGCCTACCTTGACTTGCCAA+TGG 0.579025 7.1:+18336359 None:intergenic
AGTGTTCAACCAGTACTCTC+AGG 0.579086 7.1:-18336684 MS.gene013875:intron
CACAACGATCGAGAACTTCG+CGG 0.579588 7.1:+18336860 None:intergenic
GCATATTGGATTCCCAACAT+TGG 0.580747 7.1:-18337712 MS.gene013875:CDS
AAAGAGGTGGCCGCAGCTGT+CGG 0.584660 7.1:-18336747 MS.gene013875:CDS
GTGCTTACGTCGTTGGCCAT+CGG 0.585684 7.1:-18336834 MS.gene013875:CDS
GTTGGGAATGGCAACTGCAT+TGG 0.585961 7.1:-18338112 MS.gene013875:CDS
CAACTCATATTTGTTACATG+TGG 0.589602 7.1:-18337688 MS.gene013875:CDS
GCAAAAGAATATGGAATGAT+GGG 0.591328 7.1:-18338063 MS.gene013875:CDS
GTTCGAGTATCAAATGAGCT+TGG 0.593317 7.1:-18336900 MS.gene013875:CDS
GTTCTCATTAGGTTCGCCAA+TGG 0.599406 7.1:-18339101 MS.gene013875:CDS
ACAGTAGCATATGTGAACAT+AGG 0.603815 7.1:-18336433 MS.gene013875:CDS
TGTTATCCATTGGCAAGTCA+AGG 0.605886 7.1:-18336365 MS.gene013875:intron
GAAGAAAATGAGTTATCACT+AGG 0.627440 7.1:-18339278 MS.gene013875:CDS
CAGGAGTGGCAATTGGAGCA+GGG 0.627575 7.1:-18336465 MS.gene013875:CDS
TTGATCAGTACTGTCCACGT+TGG 0.628549 7.1:+18335920 None:intergenic
AGTACTCACGAGAATACCAT+TGG 0.633680 7.1:+18339085 None:intergenic
GAATGAAACAAAGCTTATGT+GGG 0.634561 7.1:-18339243 MS.gene013875:CDS
CGATAATTCTCCGACAGCTG+CGG 0.636484 7.1:+18336737 None:intergenic
TTGGTTTCATGGCTGCAGCA+AGG 0.642144 7.1:-18337015 MS.gene013875:intron
TCATTGTCAAAAGCCAAGAG+AGG 0.649754 7.1:+18337779 None:intergenic
CTCGCAAGCGTGTAAACAGG+TGG 0.656106 7.1:-18335944 MS.gene013875:CDS
AGTATAGAGATCGATAACAA+AGG 0.663232 7.1:+18336714 None:intergenic
TTTCACCTCGAATAAAGAGG+TGG 0.663498 7.1:-18336760 MS.gene013875:CDS
GGGGTTGTGAAGACAAACAC+AGG 0.666387 7.1:+18337985 None:intergenic
TGGGAAATGATGATATCACT+TGG 0.667441 7.1:-18337034 MS.gene013875:CDS
GCCTAAGAGAGTCAAAATTG+GGG 0.673808 7.1:+18337966 None:intergenic
AATCACCTACAAAACCAACT+GGG 0.676987 7.1:-18336091 MS.gene013875:CDS
TGTAAACAGGTGGTCCAACG+TGG 0.700790 7.1:-18335934 MS.gene013875:CDS
TGAAACAAAGCTTATGTGGG+TGG 0.707571 7.1:-18339240 MS.gene013875:CDS
GAGTGGCAATTGGAGCAGGG+TGG 0.718007 7.1:-18336462 MS.gene013875:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGTTTGTTTAATTAATA+AGG + chr7.1:18339042-18339061 None:intergenic 10.0%
!! ATTTAATTAATATACATTGT+CGG + chr7.1:18339199-18339218 None:intergenic 10.0%
!! AAAAAATATGTTATCCATAA+AGG + chr7.1:18337861-18337880 None:intergenic 15.0%
!!! AAGTAAATGTAAATTTTCAA+TGG + chr7.1:18338286-18338305 None:intergenic 15.0%
!! AAATTGATGCATTATCTATA+TGG - chr7.1:18338002-18338021 MS.gene013875:CDS 20.0%
!! AATACCAAAACATCATATAA+GGG + chr7.1:18336559-18336578 None:intergenic 20.0%
!! ACAATAAAAGCAAACATAAT+TGG + chr7.1:18337327-18337346 None:intergenic 20.0%
!! GTAAAATGAATATTGTAGTT+GGG - chr7.1:18337087-18337106 MS.gene013875:intron 20.0%
!! GTATAACTGTATATTAGTAA+AGG - chr7.1:18336665-18336684 MS.gene013875:intron 20.0%
!! TAATACCAAAACATCATATA+AGG + chr7.1:18336560-18336579 None:intergenic 20.0%
!! TAATTTCATTTCATTTCAAC+AGG - chr7.1:18338732-18338751 MS.gene013875:intron 20.0%
!! TGTAAAATGAATATTGTAGT+TGG - chr7.1:18337086-18337105 MS.gene013875:intron 20.0%
!! TTATTAAGATATTGTTAACG+AGG + chr7.1:18339176-18339195 None:intergenic 20.0%
!! TTTAATGCAATCATATCTAT+CGG - chr7.1:18336364-18336383 MS.gene013875:intron 20.0%
!!! AAACTTGTTAATTTTAAGGA+AGG - chr7.1:18336451-18336470 MS.gene013875:CDS 20.0%
!!! ATTAAACAAACATTTTCGAT+AGG - chr7.1:18339047-18339066 MS.gene013875:intron 20.0%
!!! CTCAAAACTTGTTAATTTTA+AGG - chr7.1:18336447-18336466 MS.gene013875:CDS 20.0%
!!! TTAAAATGTTGTCACTTTAT+TGG - chr7.1:18336720-18336739 MS.gene013875:CDS 20.0%
!!! TTAAACAAACATTTTCGATA+GGG - chr7.1:18339048-18339067 MS.gene013875:intron 20.0%
!!! TTTTTAAAAGAACTATGAAC+AGG - chr7.1:18336880-18336899 MS.gene013875:CDS 20.0%
! AATTAAGGATGAGTTAATCT+TGG - chr7.1:18337709-18337728 MS.gene013875:CDS 25.0%
! ATACCAAAACATCATATAAG+GGG + chr7.1:18336558-18336577 None:intergenic 25.0%
! CATTTCAATGATTGTGATTA+TGG - chr7.1:18336641-18336660 MS.gene013875:intron 25.0%
! GTAAGCATATAAGATGAAAA+AGG + chr7.1:18338260-18338279 None:intergenic 25.0%
! TAAGAAGAACAAAAACAGAA+AGG + chr7.1:18338410-18338429 None:intergenic 25.0%
! TGACAATGAAATACGAATTT+GGG - chr7.1:18337451-18337470 MS.gene013875:intron 25.0%
! TTGACAATGAAATACGAATT+TGG - chr7.1:18337450-18337469 MS.gene013875:intron 25.0%
! TTTGATGCATGTTTGAATTA+AGG - chr7.1:18337694-18337713 MS.gene013875:CDS 25.0%
!! ATAGGTTGTTATTACATCAT+AGG - chr7.1:18338801-18338820 MS.gene013875:intron 25.0%
!! ATTATTAGTCAAGCTTTTGT+TGG - chr7.1:18336046-18336065 MS.gene013875:intron 25.0%
!! ATTCTAGAGATTAGTTGAAT+GGG - chr7.1:18336588-18336607 MS.gene013875:intron 25.0%
!! TGCAATGATTTCAACTATTT+TGG - chr7.1:18337482-18337501 MS.gene013875:intron 25.0%
!! TGTATCTTTTGTCAAAATCA+CGG - chr7.1:18337762-18337781 MS.gene013875:CDS 25.0%
!! TGTGAATTAGTTTGATGAAT+TGG - chr7.1:18338585-18338604 MS.gene013875:intron 25.0%
!! TTCACAAGATTTTCAACTTT+TGG - chr7.1:18336016-18336035 MS.gene013875:intron 25.0%
!! TTTTAGCATTCAAAGATCTT+TGG - chr7.1:18337583-18337602 MS.gene013875:intron 25.0%
!!! TTGATAAATTTTGAGAGACA+AGG + chr7.1:18336269-18336288 None:intergenic 25.0%
!!! TTTCAACTATTTTGGCATAT+TGG - chr7.1:18337490-18337509 MS.gene013875:intron 25.0%
AGTATAGAGATCGATAACAA+AGG + chr7.1:18338505-18338524 None:intergenic 30.0%
ATAAGATGAAAAAGGATGGA+TGG + chr7.1:18338252-18338271 None:intergenic 30.0%
ATGAATATTGTAGTTGGGAA+TGG - chr7.1:18337092-18337111 MS.gene013875:intron 30.0%
ATGAGTTATCACTAGGAAAA+AGG - chr7.1:18335945-18335964 MS.gene013875:CDS 30.0%
ATTAACAGTCTCAACATCAA+TGG - chr7.1:18338158-18338177 MS.gene013875:intron 30.0%
ATTGCCTTGTGATGTATAAA+AGG - chr7.1:18338098-18338117 MS.gene013875:CDS 30.0%
CATCAAACTAATTCACATAG+TGG + chr7.1:18338582-18338601 None:intergenic 30.0%
CCTTCAACAAAAATATACAG+AGG + chr7.1:18336760-18336779 None:intergenic 30.0%
GAAAATCTTGTGAATATTGC+TGG + chr7.1:18336010-18336029 None:intergenic 30.0%
GAAGAAAATGAGTTATCACT+AGG - chr7.1:18335938-18335957 MS.gene013875:CDS 30.0%
GAATGAAACAAAGCTTATGT+GGG - chr7.1:18335973-18335992 MS.gene013875:intron 30.0%
GAGGAATGCATGAATAATTA+TGG + chr7.1:18337421-18337440 None:intergenic 30.0%
GAGTATATCTTCAAAGATCA+TGG - chr7.1:18337175-18337194 MS.gene013875:intron 30.0%
GCAAAAGAATATGGAATGAT+GGG - chr7.1:18337153-18337172 MS.gene013875:intron 30.0%
GCATATAAGATGAAAAAGGA+TGG + chr7.1:18338256-18338275 None:intergenic 30.0%
GCTTACTATTATGTCCTTTA+TGG - chr7.1:18337844-18337863 MS.gene013875:CDS 30.0%
TATAAAAGGCTTCTTTCACT+TGG - chr7.1:18338112-18338131 MS.gene013875:CDS 30.0%
TGAGTTATCACTAGGAAAAA+GGG - chr7.1:18335946-18335965 MS.gene013875:CDS 30.0%
TGCAAAAGAATATGGAATGA+TGG - chr7.1:18337152-18337171 MS.gene013875:intron 30.0%
TTTGTGATTGAAGGAATGTT+TGG + chr7.1:18337362-18337381 None:intergenic 30.0%
! AAATATGAGTTGACCAATGT+TGG + chr7.1:18337520-18337539 None:intergenic 30.0%
! AATATGAGTTGACCAATGTT+GGG + chr7.1:18337519-18337538 None:intergenic 30.0%
! ATCCGTCATTTAACAGTTTT+GGG - chr7.1:18336909-18336928 MS.gene013875:intron 30.0%
! CAACTCATATTTGTTACATG+TGG - chr7.1:18337528-18337547 MS.gene013875:intron 30.0%
! GATTCTAGAGATTAGTTGAA+TGG - chr7.1:18336587-18336606 MS.gene013875:intron 30.0%
! GCAATTTGAAATCAAGAAGA+GGG + chr7.1:18338891-18338910 None:intergenic 30.0%
! TATCCGTCATTTAACAGTTT+TGG - chr7.1:18336908-18336927 MS.gene013875:intron 30.0%
! TATTTTCACCTCGAATAAAG+AGG - chr7.1:18338453-18338472 MS.gene013875:intron 30.0%
! TCATATTTGTTACATGTGGT+TGG - chr7.1:18337532-18337551 MS.gene013875:intron 30.0%
! TGCAATTTGAAATCAAGAAG+AGG + chr7.1:18338892-18338911 None:intergenic 30.0%
! TTCTAGAGATTAGTTGAATG+GGG - chr7.1:18336589-18336608 MS.gene013875:intron 30.0%
! TTGTTTTCACTGTTCTCATT+AGG - chr7.1:18336104-18336123 MS.gene013875:CDS 30.0%
!! CCTCTGTATATTTTTGTTGA+AGG - chr7.1:18336757-18336776 MS.gene013875:CDS 30.0%
!! GAATTTTTCAGTTTCGTGTA+TGG + chr7.1:18338934-18338953 None:intergenic 30.0%
!! TTCTTGGTAATGTTATCCAT+TGG - chr7.1:18338841-18338860 MS.gene013875:intron 30.0%
!!! ACAATATTGGTTCTTTTGAC+AGG - chr7.1:18337956-18337975 MS.gene013875:CDS 30.0%
!!! ATGATGTTTTGGTATTAGAG+TGG - chr7.1:18336563-18336582 MS.gene013875:intron 30.0%
!!! CAATATTGGTTCTTTTGACA+GGG - chr7.1:18337957-18337976 MS.gene013875:CDS 30.0%
!!! GGTGTTCTGTTTTTTCTTTT+TGG - chr7.1:18336472-18336491 MS.gene013875:intron 30.0%
AATCACCTACAAAACCAACT+GGG - chr7.1:18339125-18339144 MS.gene013875:CDS 35.0%
AATGAATCACATAGACTCCT+CGG + chr7.1:18336426-18336445 None:intergenic 35.0%
ACAGTAGCATATGTGAACAT+AGG - chr7.1:18338783-18338802 MS.gene013875:intron 35.0%
ACATCATAGGTATTCCTGTT+GGG - chr7.1:18338814-18338833 MS.gene013875:intron 35.0%
ACGATTAAATCATTCGTTGC+AGG - chr7.1:18339240-18339259 MS.gene013875:CDS 35.0%
ATGAAAAAGGATGGATGGAA+AGG + chr7.1:18338247-18338266 None:intergenic 35.0%
ATTCATAGCAATGTTGTGTC+TGG - chr7.1:18337015-18337034 MS.gene013875:intron 35.0%
CTCCCAAAACTGTTAAATGA+CGG + chr7.1:18336914-18336933 None:intergenic 35.0%
CTTCTGATATGCTTTCATCT+TGG + chr7.1:18337275-18337294 None:intergenic 35.0%
GATGATATCACTTGGTTTCA+TGG - chr7.1:18338190-18338209 MS.gene013875:intron 35.0%
GCATATGGTGCAAAAGAATA+TGG - chr7.1:18337144-18337163 MS.gene013875:intron 35.0%
GCTATGGTACAACACAATAT+TGG - chr7.1:18337943-18337962 MS.gene013875:CDS 35.0%
GGAATGAAACAAAGCTTATG+TGG - chr7.1:18335972-18335991 MS.gene013875:intron 35.0%
GTATCAAATGAGCTTGGTAA+AGG - chr7.1:18338322-18338341 MS.gene013875:intron 35.0%
TAAGGATGAGTTAATCTTGG+TGG - chr7.1:18337712-18337731 MS.gene013875:CDS 35.0%
TAATCACCTACAAAACCAAC+TGG - chr7.1:18339124-18339143 MS.gene013875:CDS 35.0%
TACATCATAGGTATTCCTGT+TGG - chr7.1:18338813-18338832 MS.gene013875:intron 35.0%
TATCACTAGGAAAAAGGGTT+TGG - chr7.1:18335951-18335970 MS.gene013875:CDS 35.0%
TATTATGCAGTCTTGAGCTA+TGG - chr7.1:18337927-18337946 MS.gene013875:CDS 35.0%
TCATTTCATTTCAACAGGAG+TGG - chr7.1:18338737-18338756 MS.gene013875:intron 35.0%
TGAAAAAGGATGGATGGAAA+GGG + chr7.1:18338246-18338265 None:intergenic 35.0%
TGGGAAATGATGATATCACT+TGG - chr7.1:18338182-18338201 MS.gene013875:intron 35.0%
TGTTCTTGCTTTGTGATTGA+AGG + chr7.1:18337371-18337390 None:intergenic 35.0%
TTATTCATGCATTCCTCTCT+TGG - chr7.1:18337424-18337443 MS.gene013875:intron 35.0%
! AAATACGAATTTGGGATTGC+TGG - chr7.1:18337459-18337478 MS.gene013875:intron 35.0%
! CAAGCTTTTGTTGGTCATAT+TGG - chr7.1:18336055-18336074 MS.gene013875:intron 35.0%
! CAAGGAGAAACATAGTTTTC+AGG + chr7.1:18336251-18336270 None:intergenic 35.0%
! CAGATTCATTCAAGTTAGCA+AGG + chr7.1:18337903-18337922 None:intergenic 35.0%
! GAAGCCTTTTATACATCACA+AGG + chr7.1:18338105-18338124 None:intergenic 35.0%
! GGAAGCATACATATATGCAA+AGG + chr7.1:18339021-18339040 None:intergenic 35.0%
! TCACCCCTTATATGATGTTT+TGG - chr7.1:18336552-18336571 MS.gene013875:intron 35.0%
! TCTAGAGATTAGTTGAATGG+GGG - chr7.1:18336590-18336609 MS.gene013875:intron 35.0%
!! AACATTTTCGATAGGGTATC+TGG - chr7.1:18339055-18339074 MS.gene013875:intron 35.0%
!! AGTGCTGCATAGAGTTTTAA+AGG + chr7.1:18336952-18336971 None:intergenic 35.0%
ACACATATTGAAGACGTGTG+TGG - chr7.1:18336973-18336992 MS.gene013875:intron 40.0%
ACAGTCTCAACATCAATGGA+TGG - chr7.1:18338162-18338181 MS.gene013875:intron 40.0%
ACCATATGCTTGTCCACAAA+GGG + chr7.1:18337133-18337152 None:intergenic 40.0%
AGGGAACATGAAAAATGCTG+AGG - chr7.1:18337976-18337995 MS.gene013875:CDS 40.0%
AGTACTCACGAGAATACCAT+TGG + chr7.1:18336134-18336153 None:intergenic 40.0%
ATCTGGATGGGAATGTTGTT+TGG - chr7.1:18339072-18339091 MS.gene013875:intron 40.0%
ATTTCAACAGGAGTGGCAAT+TGG - chr7.1:18338744-18338763 MS.gene013875:intron 40.0%
CAAAAACAGAAAGGATCCGA+TGG + chr7.1:18338401-18338420 None:intergenic 40.0%
CAGTCTCAACATCAATGGAT+GGG - chr7.1:18338163-18338182 MS.gene013875:intron 40.0%
CATCATAGGTATTCCTGTTG+GGG - chr7.1:18338815-18338834 MS.gene013875:intron 40.0%
GAAAAAGGATGGATGGAAAG+GGG + chr7.1:18338245-18338264 None:intergenic 40.0%
GAACACCATCATTGCATTCT+TGG - chr7.1:18337386-18337405 MS.gene013875:intron 40.0%
GAAGAAGAACAAGTGCAGTT+AGG + chr7.1:18337212-18337231 None:intergenic 40.0%
GAGTGCATCTGTTAGATTGA+TGG + chr7.1:18337815-18337834 None:intergenic 40.0%
GCATATTGGATTCCCAACAT+TGG - chr7.1:18337504-18337523 MS.gene013875:intron 40.0%
GCCTAAGAGAGTCAAAATTG+GGG + chr7.1:18337253-18337272 None:intergenic 40.0%
GGCCTAAGAGAGTCAAAATT+GGG + chr7.1:18337254-18337273 None:intergenic 40.0%
GTTCGAGTATCAAATGAGCT+TGG - chr7.1:18338316-18338335 MS.gene013875:intron 40.0%
TCATTGTCAAAAGCCAAGAG+AGG + chr7.1:18337440-18337459 None:intergenic 40.0%
TGAAACAAAGCTTATGTGGG+TGG - chr7.1:18335976-18335995 MS.gene013875:intron 40.0%
TGGCCTAAGAGAGTCAAAAT+TGG + chr7.1:18337255-18337274 None:intergenic 40.0%
TGTTATCCATTGGCAAGTCA+AGG - chr7.1:18338851-18338870 MS.gene013875:intron 40.0%
TTGCAGGAAACATCTCTCTT+TGG - chr7.1:18337295-18337314 MS.gene013875:intron 40.0%
TTTCACCTCGAATAAAGAGG+TGG - chr7.1:18338456-18338475 MS.gene013875:intron 40.0%
! CTAGAGATTAGTTGAATGGG+GGG - chr7.1:18336591-18336610 MS.gene013875:intron 40.0%
! GAAAGCATATCAGAAGTTGC+AGG - chr7.1:18337279-18337298 MS.gene013875:CDS 40.0%
! TACTTTGTACCTGAGAGTAC+TGG + chr7.1:18338544-18338563 None:intergenic 40.0%
! TTTCGATAGGGTATCTGGAT+GGG - chr7.1:18339060-18339079 MS.gene013875:intron 40.0%
!! TTTTCGATAGGGTATCTGGA+TGG - chr7.1:18339059-18339078 MS.gene013875:intron 40.0%
!!! ACCCCAATTTTGACTCTCTT+AGG - chr7.1:18337249-18337268 MS.gene013875:CDS 40.0%
ACAACATTGCACCAGCTGAA+AGG + chr7.1:18337626-18337645 None:intergenic 45.0%
ACCCTTTGTGGACAAGCATA+TGG - chr7.1:18337129-18337148 MS.gene013875:intron 45.0%
AGCTGCCAAGAATGCAATGA+TGG + chr7.1:18337394-18337413 None:intergenic 45.0%
AGTGTTCAACCAGTACTCTC+AGG - chr7.1:18338532-18338551 MS.gene013875:intron 45.0%
ATCCATTGGCAAGTCAAGGT+AGG - chr7.1:18338855-18338874 MS.gene013875:intron 45.0%
ATTCCTGTTGGGGTTGTTCT+TGG - chr7.1:18338825-18338844 MS.gene013875:intron 45.0%
ATTGAGACACACCAAATCCG+AGG - chr7.1:18336406-18336425 MS.gene013875:CDS 45.0%
CAACATTGCACCAGCTGAAA+GGG + chr7.1:18337625-18337644 None:intergenic 45.0%
CAAGACAAGCAAGTTCAACG+TGG + chr7.1:18336218-18336237 None:intergenic 45.0%
CACCATATGCTTGTCCACAA+AGG + chr7.1:18337134-18337153 None:intergenic 45.0%
GAAAGGGAAAGTTTGACGAC+AGG + chr7.1:18337609-18337628 None:intergenic 45.0%
GTAGGTATCTGTGACGTGTT+TGG + chr7.1:18336307-18336326 None:intergenic 45.0%
GTCAAACTTTCCCTTTCAGC+TGG - chr7.1:18337612-18337631 MS.gene013875:CDS 45.0%
GTTCTCATTAGGTTCGCCAA+TGG - chr7.1:18336115-18336134 MS.gene013875:CDS 45.0%
TCACATAGACTCCTCGGATT+TGG + chr7.1:18336420-18336439 None:intergenic 45.0%
TTACCAAGAACAACCCCAAC+AGG + chr7.1:18338831-18338850 None:intergenic 45.0%
TTGATCAGTACTGTCCACGT+TGG + chr7.1:18339299-18339318 None:intergenic 45.0%
TTTCAGCTGGTGCAATGTTG+TGG - chr7.1:18337625-18337644 MS.gene013875:CDS 45.0%
!! GGGGGTTTTGATGACTTTGT+AGG - chr7.1:18336609-18336628 MS.gene013875:intron 45.0%
!! TATCATCAGTGTCGACGTGT+AGG + chr7.1:18336325-18336344 None:intergenic 45.0%
!! TGCAAAGGCACTTCAGTTGA+AGG + chr7.1:18339006-18339025 None:intergenic 45.0%
!!! CTCATCCCAGTTGGTTTTGT+AGG + chr7.1:18339133-18339152 None:intergenic 45.0%
!! TTATTATATTATTAAAAAGA+AGG + chr7.1:18336192-18336211 None:intergenic 5.0%
AGGATGGATGGAAAGGGGAT+CGG + chr7.1:18338240-18338259 None:intergenic 50.0%
CAAAACCAACTGGGATGAGC+AGG - chr7.1:18339134-18339153 MS.gene013875:CDS 50.0%
CACAACGATCGAGAACTTCG+CGG + chr7.1:18338359-18338378 None:intergenic 50.0%
CGATAATTCTCCGACAGCTG+CGG + chr7.1:18338482-18338501 None:intergenic 50.0%
GAGAAACCTTGCCAAGTCTC+AGG + chr7.1:18337561-18337580 None:intergenic 50.0%
GGGGTTGTGAAGACAAACAC+AGG + chr7.1:18337234-18337253 None:intergenic 50.0%
GTTGGGAATGGCAACTGCAT+TGG - chr7.1:18337104-18337123 MS.gene013875:intron 50.0%
TAGCTCGCAAGCGTGTAAAC+AGG - chr7.1:18339269-18339288 MS.gene013875:CDS 50.0%
TCATACCTGCTCATCCCAGT+TGG + chr7.1:18339142-18339161 None:intergenic 50.0%
TGTAAACAGGTGGTCCAACG+TGG - chr7.1:18339282-18339301 MS.gene013875:CDS 50.0%
TGTGACAGTGCTTACGTCGT+TGG - chr7.1:18338375-18338394 MS.gene013875:intron 50.0%
TTGGTTTCATGGCTGCAGCA+AGG - chr7.1:18338201-18338220 MS.gene013875:intron 50.0%
!! AGCCTACCTTGACTTGCCAA+TGG + chr7.1:18338860-18338879 None:intergenic 50.0%
ACAGGAGTGGCAATTGGAGC+AGG - chr7.1:18338750-18338769 MS.gene013875:intron 55.0%
CAGGAGTGGCAATTGGAGCA+GGG - chr7.1:18338751-18338770 MS.gene013875:intron 55.0%
CTCGCAAGCGTGTAAACAGG+TGG - chr7.1:18339272-18339291 MS.gene013875:CDS 55.0%
GTGCTTACGTCGTTGGCCAT+CGG - chr7.1:18338382-18338401 MS.gene013875:intron 55.0%
TGCGGCCACCTCTTTATTCG+AGG + chr7.1:18338464-18338483 None:intergenic 55.0%
TGGTGTCCTGAGACTTGGCA+AGG - chr7.1:18337552-18337571 MS.gene013875:intron 55.0%
! ACTGCATTGGCGACCCTTTG+TGG - chr7.1:18337117-18337136 MS.gene013875:intron 55.0%
! GTGGTTGGTGTCCTGAGACT+TGG - chr7.1:18337547-18337566 MS.gene013875:intron 55.0%
AAAGAGGTGGCCGCAGCTGT+CGG - chr7.1:18338469-18338488 MS.gene013875:intron 60.0%
GAGTGGCAATTGGAGCAGGG+TGG - chr7.1:18338754-18338773 MS.gene013875:intron 60.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 18335890 18339348 18335890 ID=MS.gene013875
chr7.1 mRNA 18335890 18339348 18335890 ID=MS.gene013875.t1;Parent=MS.gene013875
chr7.1 exon 18339094 18339348 18339094 ID=MS.gene013875.t1.exon1;Parent=MS.gene013875.t1
chr7.1 CDS 18339094 18339348 18339094 ID=cds.MS.gene013875.t1;Parent=MS.gene013875.t1
chr7.1 exon 18337592 18338133 18337592 ID=MS.gene013875.t1.exon2;Parent=MS.gene013875.t1
chr7.1 CDS 18337592 18338133 18337592 ID=cds.MS.gene013875.t1;Parent=MS.gene013875.t1
chr7.1 exon 18337215 18337301 18337215 ID=MS.gene013875.t1.exon3;Parent=MS.gene013875.t1
chr7.1 CDS 18337215 18337301 18337215 ID=cds.MS.gene013875.t1;Parent=MS.gene013875.t1
chr7.1 exon 18337016 18337072 18337016 ID=MS.gene013875.t1.exon4;Parent=MS.gene013875.t1
chr7.1 CDS 18337016 18337072 18337016 ID=cds.MS.gene013875.t1;Parent=MS.gene013875.t1
chr7.1 exon 18336685 18336923 18336685 ID=MS.gene013875.t1.exon5;Parent=MS.gene013875.t1
chr7.1 CDS 18336685 18336923 18336685 ID=cds.MS.gene013875.t1;Parent=MS.gene013875.t1
chr7.1 exon 18336366 18336484 18336366 ID=MS.gene013875.t1.exon6;Parent=MS.gene013875.t1
chr7.1 CDS 18336366 18336484 18336366 ID=cds.MS.gene013875.t1;Parent=MS.gene013875.t1
chr7.1 exon 18336083 18336169 18336083 ID=MS.gene013875.t1.exon7;Parent=MS.gene013875.t1
chr7.1 CDS 18336083 18336169 18336083 ID=cds.MS.gene013875.t1;Parent=MS.gene013875.t1
chr7.1 exon 18335890 18335976 18335890 ID=MS.gene013875.t1.exon8;Parent=MS.gene013875.t1
chr7.1 CDS 18335890 18335976 18335890 ID=cds.MS.gene013875.t1;Parent=MS.gene013875.t1
Gene Sequence

>MS.gene013875

ATGGAAAGAGATCTAAAACAGAATCTACTACTGAAAAAATCAGAACAAGAAGAAAATGAGTTATCACTAGGAAAAAGGGTTTGGAATGAAACAAAGCTTATGTGGGTGGTTGCAGCACCAGCAATATTCACAAGATTTTCAACTTTTGGTATTCAAATTATTAGTCAAGCTTTTGTTGGTCATATTGGTTCAAGAGAACTCGCTGCTTTTGCTCTTGTTTTCACTGTTCTCATTAGGTTCGCCAATGGTATTCTCGTGAGTACTTCATTTTCTCATCATTTTTCAACTTTTTTCTTTGACCTTCTTTTTAATAATATAATAATAACCACGTTGAACTTGCTTGTCTTGTCTTGTGTTACCTGAAAACTATGTTTCTCCTTGTCTCTCAAAATTTATCAAACACAAGTATTGACTCCAAACACGTCACAGATACCTACACGTCGACACTGATGATAATTTGAGAGAATTACATACTTTAATGCAATCATATCTATCGGAAGCTGACACTTGTCTGATATTGAGACACACCAAATCCGAGGAGTCTATGTGATTCATTGCTCAAAACTTGTTAATTTTAAGGAAGGTGTTCTGTTTTTTCTTTTTGGTATAGATACTAGTAGTAGTACTTCTCTGTTTCTTCAGACAAAAGTTCAAAAAAAGTTTCACCCCTTATATGATGTTTTGGTATTAGAGTGGTGATTCTAGAGATTAGTTGAATGGGGGGTTTTGATGACTTTGTAGGAGAAAGTTTCATTTCAATGATTGTGATTATGGTGTATAACTGTATATTAGTAAAGGTTGCAGCTTTTGCACTTTTTCTATTAAAACATTTAAAATGTTGTCACTTTATTGGTGTGTGAACACTTTCCTCTGTATATTTTTGTTGAAGGACACTTGATAAAGATTTAAAAATTGAAACAATCGATAACTTTCATCTAGAAAAAGTTGTTTTAGCATGTTTCAATGAGTTGAATACAGAAGAAGAAGTTGTTTTTAAAAGAACTATGAACAGGAAAAATATCCGTCATTTAACAGTTTTGGGAGAAATGATTACAATTTCCTTTAAAACTCTATGCAGCACTTACACATATTGAAGACGTGTGTGGTTTTCGACACTGACACGACATTCATAGCAATGTTGTGTCTGGTGTCTATGCTTCATAGAACATACTAAGTACTAACACAAGTTAATTGTTTGTAAAATGAATATTGTAGTTGGGAATGGCAACTGCATTGGCGACCCTTTGTGGACAAGCATATGGTGCAAAAGAATATGGAATGATGGGAGTATATCTTCAAAGATCATGGATAGTTTTATTCCTAACTGCACTTGTTCTTCTTCCTGTGTTTGTCTTCACAACCCCAATTTTGACTCTCTTAGGCCAAGATGAAAGCATATCAGAAGTTGCAGGAAACATCTCTCTTTGGTCAATTCCAATTATGTTTGCTTTTATTGTCTCATTCACTTGCCAAACATTCCTTCAATCACAAAGCAAGAACACCATCATTGCATTCTTGGCAGCTTTTTCCATAATTATTCATGCATTCCTCTCTTGGCTTTTGACAATGAAATACGAATTTGGGATTGCTGGTGCAATGATTTCAACTATTTTGGCATATTGGATTCCCAACATTGGTCAACTCATATTTGTTACATGTGGTTGGTGTCCTGAGACTTGGCAAGGTTTCTCATTTTTAGCATTCAAAGATCTTTGGCCTGTCGTCAAACTTTCCCTTTCAGCTGGTGCAATGTTGTGGTGAGTTCTTTGCAAATGCAATTACTGATGACTTGATTTGAATTTCATTTGATGCATGTTTGAATTAAGGATGAGTTAATCTTGGTGGCATCGTAGTTTTGTTGAAGCTCGTAAGTGTATCTTTTGTCAAAATCACGGCGATACAATGTGATTATGTCAAACTAACCATCAATCTAACAGATGCACTCAATCAATGAGCTTACTATTATGTCCTTTATGGATAACATATTTTTTGTGTGAACAGATATATATGCCTTGCTAACTTGAATGAATCTGTTTATATTATGCAGTCTTGAGCTATGGTACAACACAATATTGGTTCTTTTGACAGGGAACATGAAAAATGCTGAGGTTGAAATTGATGCATTATCTATATGGTAATGCTTCTCTTCAGTAACACTTTTATTAAAATTTATGTATTCTGTTTCTACTTTATGTTATTTGTTATTGTATTGCCTTGTGATGTATAAAAGGCTTCTTTCACTTGGCTTGCTAAAGATCAAATGTTATTATTAACAGTCTCAACATCAATGGATGGGAAATGATGATATCACTTGGTTTCATGGCTGCAGCAAGGTAATAACATTGTTCCGATCCCCTTTCCATCCATCCTTTTTCATCTTATATGCTTACTTACCATTGAAAATTTACATTTACTTATTGTGTAGTGTTCGAGTATCAAATGAGCTTGGTAAAGGAAGCGCGAAAGCCGCGAAGTTCTCGATCGTTGTGACAGTGCTTACGTCGTTGGCCATCGGATCCTTTCTGTTTTTGTTCTTCTTATTTTTTAGAGAAAGACTTGCTTATATTTTCACCTCGAATAAAGAGGTGGCCGCAGCTGTCGGAGAATTATCGCCTTTGTTATCGATCTCTATACTATTAAACAGTGTTCAACCAGTACTCTCAGGTACAAAGTAGTATTTACAACATTTCCACTATGTGAATTAGTTTGATGAATTGGTTCAAGACTTGTGCAAATTAATCTTCAATGCTATATAACAACAGTTATACATTGAATTTGTCAGTTTTTCTCGTGTATATATTTATACTTGTCAAAGAATATGAAAGAAATGAAAGCAAAAATGTAATTTCATTTCATTTCAACAGGAGTGGCAATTGGAGCAGGGTGGCAAAGCACAGTAGCATATGTGAACATAGGTTGTTATTACATCATAGGTATTCCTGTTGGGGTTGTTCTTGGTAATGTTATCCATTGGCAAGTCAAGGTAGGCTTTTATCATCCCTCTTCTTGATTTCAAATTGCACTTATATTAAGCACTGATGCCATACACGAAACTGAAAAATTCAATTATTGAATGTTATACATGAGTTAATGTCGTGTCAGATACTCACACACCTTCAACTGAAGTGCCTTTGCATATATGTATGCTTCCTTATTAATTAAACAAACATTTTCGATAGGGTATCTGGATGGGAATGTTGTTTGGAACATTGATTCAAACTATAGTTCTACTTATAATCACCTACAAAACCAACTGGGATGAGCAGGTATGATGACTTATTTTCCTCGTTAACAATATCTTAATAACCGACAATGTATATTAATTAAATTCTTATAGATATACATCTAATACGATTAAATCATTCGTTGCAGGTGACTGTAGCTCGCAAGCGTGTAAACAGGTGGTCCAACGTGGACAGTACTGATCAAGAAACAAAAACTAACTTAATTGAAAAATAG
Protein sequence

>MS.gene013875.t1

MERDLKQNLLLKKSEQEENELSLGKRVWNETKLMWVVAAPAIFTRFSTFGIQIISQAFVGHIGSRELAAFALVFTVLIRFANGILLGMATALATLCGQAYGAKEYGMMGVYLQRSWIVLFLTALVLLPVFVFTTPILTLLGQDESISEVAGNISLWSIPIMFAFIVSFTCQTFLQSQSKNTIIAFLAAFSIIIHAFLSWLLTMKYEFGIAGAMISTILAYWIPNIGQLIFVTCGWCPETWQGFSFLAFKDLWPVVKLSLSAGAMLCLELWYNTILVLLTGNMKNAEVEIDALSICLNINGWEMMISLGFMAAASVRVSNELGKGSAKAAKFSIVVTVLTSLAIGSFLFLFFLFFRERLAYIFTSNKEVAAAVGELSPLLSISILLNSVQPVLSGVAIGAGWQSTVAYVNIGCYYIIGIPVGVVLGNVIHWQVKGIWMGMLFGTLIQTIVLLIITYKTNWDEQVTVARKRVNRWSNVDSTDQETKTNLIEK