Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83905.t1 | XP_013451493.1 | 95.9 | 488 | 20 | 0 | 1 | 488 | 1 | 488 | 3.20E-258 | 900.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83905.t1 | Q8W488 | 62.3 | 461 | 172 | 2 | 18 | 477 | 29 | 488 | 3.3e-158 | 559.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83905.t1 | A0A072U818 | 95.9 | 488 | 20 | 0 | 1 | 488 | 1 | 488 | 2.3e-258 | 900.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene83905 | MS.gene41836 | PPI |
| MS.gene023921 | MS.gene83905 | PPI |
| MS.gene55578 | MS.gene83905 | PPI |
| MS.gene73453 | MS.gene83905 | PPI |
| MS.gene55577 | MS.gene83905 | PPI |
| MS.gene71749 | MS.gene83905 | PPI |
| MS.gene042535 | MS.gene83905 | PPI |
| MS.gene013875 | MS.gene83905 | PPI |
| MS.gene054821 | MS.gene83905 | PPI |
| MS.gene55576 | MS.gene83905 | PPI |
| MS.gene83904 | MS.gene83905 | PPI |
| MS.gene83905 | MS.gene013876 | PPI |
| MS.gene029501 | MS.gene83905 | PPI |
| MS.gene058644 | MS.gene83905 | PPI |
| MS.gene013873 | MS.gene83905 | PPI |
| MS.gene41838 | MS.gene83905 | PPI |
| MS.gene41839 | MS.gene83905 | PPI |
| MS.gene029498 | MS.gene83905 | PPI |
| MS.gene042538 | MS.gene83905 | PPI |
| MS.gene47232 | MS.gene83905 | PPI |
| MS.gene83905 | MS.gene71750 | PPI |
| MS.gene62346 | MS.gene83905 | PPI |
| MS.gene83905 | MS.gene013874 | PPI |
| MS.gene83905 | MS.gene47231 | PPI |
| MS.gene62347 | MS.gene83905 | PPI |
| MS.gene83905 | MS.gene73451 | PPI |
| MS.gene47231 | MS.gene83905 | PPI |
| MS.gene83905 | MS.gene042536 | PPI |
| MS.gene042539 | MS.gene83905 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83905.t1 | MTR_6g027190 | 95.902 | 488 | 20 | 0 | 1 | 488 | 1 | 488 | 0.0 | 887 |
| MS.gene83905.t1 | MTR_6g027200 | 79.600 | 500 | 90 | 1 | 1 | 488 | 1 | 500 | 0.0 | 783 |
| MS.gene83905.t1 | MTR_7g087400 | 72.050 | 483 | 127 | 2 | 4 | 479 | 3 | 484 | 0.0 | 709 |
| MS.gene83905.t1 | MTR_7g087410 | 65.828 | 477 | 152 | 3 | 3 | 469 | 1 | 476 | 0.0 | 634 |
| MS.gene83905.t1 | MTR_7g087370 | 65.217 | 483 | 131 | 3 | 4 | 479 | 3 | 455 | 0.0 | 622 |
| MS.gene83905.t1 | MTR_7g087410 | 67.700 | 387 | 124 | 1 | 84 | 469 | 1 | 387 | 0.0 | 542 |
| MS.gene83905.t1 | MTR_7g087430 | 68.217 | 387 | 122 | 1 | 84 | 469 | 1 | 387 | 0.0 | 534 |
| MS.gene83905.t1 | MTR_5g032720 | 49.567 | 462 | 230 | 3 | 16 | 475 | 28 | 488 | 3.26e-162 | 468 |
| MS.gene83905.t1 | MTR_5g032750 | 47.510 | 482 | 234 | 7 | 3 | 475 | 18 | 489 | 5.63e-154 | 447 |
| MS.gene83905.t1 | MTR_3g099700 | 48.712 | 466 | 236 | 3 | 13 | 476 | 35 | 499 | 1.00e-152 | 445 |
| MS.gene83905.t1 | MTR_1g021740 | 47.921 | 457 | 236 | 2 | 13 | 468 | 24 | 479 | 2.56e-145 | 425 |
| MS.gene83905.t1 | MTR_3g099720 | 45.987 | 461 | 246 | 3 | 8 | 466 | 24 | 483 | 1.46e-141 | 416 |
| MS.gene83905.t1 | MTR_8g069470 | 43.064 | 483 | 271 | 3 | 2 | 483 | 30 | 509 | 9.06e-140 | 412 |
| MS.gene83905.t1 | MTR_2g022980 | 46.610 | 472 | 245 | 3 | 3 | 468 | 23 | 493 | 3.24e-138 | 407 |
| MS.gene83905.t1 | MTR_1g100180 | 44.211 | 475 | 260 | 3 | 5 | 478 | 27 | 497 | 6.00e-138 | 407 |
| MS.gene83905.t1 | MTR_5g033100 | 45.053 | 475 | 255 | 3 | 8 | 477 | 40 | 513 | 8.67e-135 | 399 |
| MS.gene83905.t1 | MTR_4g048000 | 45.399 | 489 | 252 | 4 | 4 | 486 | 40 | 519 | 7.48e-134 | 397 |
| MS.gene83905.t1 | MTR_2g088400 | 46.072 | 471 | 247 | 3 | 4 | 468 | 28 | 497 | 1.30e-131 | 391 |
| MS.gene83905.t1 | MTR_6g047610 | 40.084 | 474 | 277 | 5 | 4 | 476 | 14 | 481 | 2.22e-118 | 356 |
| MS.gene83905.t1 | MTR_6g047640 | 39.789 | 475 | 278 | 4 | 4 | 476 | 14 | 482 | 4.37e-117 | 353 |
| MS.gene83905.t1 | MTR_2g088400 | 45.057 | 435 | 232 | 3 | 4 | 432 | 28 | 461 | 1.92e-113 | 343 |
| MS.gene83905.t1 | MTR_5g090290 | 42.827 | 474 | 265 | 3 | 4 | 472 | 23 | 495 | 4.25e-112 | 343 |
| MS.gene83905.t1 | MTR_6g047640 | 37.474 | 475 | 270 | 5 | 4 | 476 | 14 | 463 | 5.22e-109 | 332 |
| MS.gene83905.t1 | MTR_6g047590 | 39.362 | 470 | 278 | 5 | 4 | 472 | 14 | 477 | 1.64e-107 | 328 |
| MS.gene83905.t1 | MTR_8g063590 | 39.703 | 471 | 275 | 5 | 3 | 466 | 29 | 497 | 3.67e-105 | 323 |
| MS.gene83905.t1 | MTR_6g081410 | 35.158 | 475 | 296 | 6 | 1 | 467 | 1 | 471 | 3.48e-87 | 276 |
| MS.gene83905.t1 | MTR_5g087930 | 38.976 | 449 | 233 | 9 | 4 | 450 | 23 | 432 | 2.65e-85 | 270 |
| MS.gene83905.t1 | MTR_6g081780 | 34.672 | 473 | 297 | 6 | 1 | 465 | 1 | 469 | 1.09e-84 | 269 |
| MS.gene83905.t1 | MTR_6g081300 | 35.449 | 457 | 278 | 7 | 19 | 466 | 5 | 453 | 4.33e-84 | 267 |
| MS.gene83905.t1 | MTR_1g108810 | 33.769 | 459 | 301 | 2 | 4 | 460 | 14 | 471 | 5.43e-82 | 262 |
| MS.gene83905.t1 | MTR_6g081390 | 34.581 | 454 | 289 | 5 | 19 | 467 | 7 | 457 | 5.70e-80 | 256 |
| MS.gene83905.t1 | MTR_6g081400 | 33.333 | 453 | 296 | 3 | 19 | 467 | 10 | 460 | 2.96e-79 | 255 |
| MS.gene83905.t1 | MTR_7g082810 | 36.344 | 465 | 287 | 4 | 7 | 465 | 1 | 462 | 2.82e-78 | 253 |
| MS.gene83905.t1 | MTR_6g066380 | 35.789 | 475 | 291 | 6 | 1 | 465 | 1 | 471 | 1.00e-77 | 251 |
| MS.gene83905.t1 | MTR_6g081810 | 34.255 | 470 | 277 | 6 | 1 | 465 | 1 | 443 | 1.14e-76 | 248 |
| MS.gene83905.t1 | MTR_6g081240 | 33.632 | 446 | 285 | 6 | 19 | 458 | 5 | 445 | 1.18e-76 | 247 |
| MS.gene83905.t1 | MTR_2g079020 | 34.444 | 450 | 286 | 3 | 15 | 456 | 22 | 470 | 3.76e-74 | 242 |
| MS.gene83905.t1 | MTR_8g106670 | 32.759 | 464 | 296 | 10 | 12 | 467 | 1 | 456 | 8.71e-72 | 236 |
| MS.gene83905.t1 | MTR_2g078930 | 34.253 | 435 | 283 | 2 | 24 | 456 | 43 | 476 | 9.28e-71 | 233 |
| MS.gene83905.t1 | MTR_1g108840 | 33.053 | 475 | 295 | 10 | 2 | 465 | 21 | 483 | 6.23e-70 | 231 |
| MS.gene83905.t1 | MTR_2g078960 | 33.333 | 462 | 299 | 3 | 3 | 456 | 6 | 466 | 1.84e-69 | 229 |
| MS.gene83905.t1 | MTR_6g004220 | 31.601 | 481 | 312 | 8 | 3 | 472 | 1 | 475 | 6.37e-69 | 228 |
| MS.gene83905.t1 | MTR_2g078970 | 33.333 | 453 | 292 | 3 | 13 | 456 | 13 | 464 | 1.33e-68 | 228 |
| MS.gene83905.t1 | MTR_6g081310 | 33.045 | 463 | 277 | 5 | 19 | 465 | 5 | 450 | 1.85e-68 | 226 |
| MS.gene83905.t1 | MTR_6g004220 | 31.828 | 465 | 302 | 7 | 3 | 458 | 8 | 466 | 1.06e-67 | 225 |
| MS.gene83905.t1 | MTR_5g090280 | 35.252 | 417 | 230 | 5 | 84 | 469 | 1 | 408 | 8.44e-66 | 218 |
| MS.gene83905.t1 | MTR_1g108990 | 32.979 | 470 | 301 | 7 | 7 | 465 | 1 | 467 | 4.90e-65 | 218 |
| MS.gene83905.t1 | MTR_7g082800 | 32.576 | 396 | 263 | 2 | 84 | 476 | 1 | 395 | 1.53e-62 | 209 |
| MS.gene83905.t1 | MTR_1g109060 | 32.623 | 469 | 303 | 6 | 7 | 465 | 1 | 466 | 1.34e-61 | 209 |
| MS.gene83905.t1 | MTR_3g111020 | 29.512 | 471 | 315 | 7 | 3 | 462 | 26 | 490 | 1.95e-61 | 210 |
| MS.gene83905.t1 | MTR_1g109060 | 32.900 | 462 | 297 | 6 | 7 | 458 | 1 | 459 | 5.08e-61 | 207 |
| MS.gene83905.t1 | MTR_5g067460 | 27.004 | 474 | 320 | 7 | 2 | 462 | 34 | 494 | 2.89e-53 | 188 |
| MS.gene83905.t1 | MTR_2g078990 | 36.207 | 290 | 183 | 1 | 169 | 456 | 4 | 293 | 5.34e-50 | 174 |
| MS.gene83905.t1 | MTR_5g010830 | 27.527 | 465 | 308 | 6 | 13 | 462 | 54 | 504 | 1.89e-49 | 177 |
| MS.gene83905.t1 | MTR_1g101500 | 27.273 | 462 | 317 | 8 | 6 | 457 | 46 | 498 | 3.28e-47 | 171 |
| MS.gene83905.t1 | MTR_0039s0080 | 26.261 | 476 | 336 | 5 | 21 | 488 | 35 | 503 | 4.06e-47 | 171 |
| MS.gene83905.t1 | MTR_6g043810 | 25.845 | 503 | 348 | 8 | 4 | 488 | 3 | 498 | 1.95e-46 | 169 |
| MS.gene83905.t1 | MTR_6g043810 | 25.845 | 503 | 348 | 8 | 4 | 488 | 13 | 508 | 2.43e-46 | 169 |
| MS.gene83905.t1 | MTR_4g027920 | 26.622 | 447 | 319 | 5 | 21 | 461 | 153 | 596 | 3.09e-44 | 164 |
| MS.gene83905.t1 | MTR_6g004220 | 28.928 | 401 | 260 | 7 | 3 | 389 | 8 | 397 | 9.27e-43 | 157 |
| MS.gene83905.t1 | MTR_6g088805 | 26.283 | 487 | 326 | 7 | 5 | 475 | 7 | 476 | 6.72e-40 | 150 |
| MS.gene83905.t1 | MTR_2g079030 | 40.513 | 195 | 116 | 0 | 262 | 456 | 319 | 513 | 8.88e-37 | 142 |
| MS.gene83905.t1 | MTR_5g011540 | 29.011 | 455 | 293 | 10 | 24 | 462 | 43 | 483 | 2.65e-34 | 135 |
| MS.gene83905.t1 | MTR_8g102430 | 25.435 | 460 | 286 | 11 | 22 | 462 | 21 | 442 | 3.35e-33 | 131 |
| MS.gene83905.t1 | MTR_6g004220 | 28.750 | 320 | 203 | 7 | 3 | 308 | 8 | 316 | 1.47e-29 | 118 |
| MS.gene83905.t1 | MTR_2g435930 | 22.678 | 463 | 339 | 5 | 13 | 457 | 8 | 469 | 3.17e-28 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83905.t1 | AT1G33110 | 61.571 | 471 | 176 | 3 | 8 | 477 | 22 | 488 | 0.0 | 592 |
| MS.gene83905.t1 | AT1G33100 | 58.664 | 479 | 193 | 3 | 3 | 477 | 8 | 485 | 0.0 | 580 |
| MS.gene83905.t1 | AT1G33080 | 59.100 | 489 | 187 | 4 | 1 | 477 | 1 | 488 | 0.0 | 562 |
| MS.gene83905.t1 | AT1G33090 | 57.895 | 475 | 189 | 3 | 4 | 477 | 24 | 488 | 0.0 | 558 |
| MS.gene83905.t1 | AT1G33080 | 60.776 | 464 | 170 | 3 | 6 | 458 | 7 | 469 | 0.0 | 552 |
| MS.gene83905.t1 | AT1G33110 | 62.435 | 386 | 140 | 3 | 8 | 392 | 22 | 403 | 1.70e-167 | 479 |
| MS.gene83905.t1 | AT5G44050 | 47.284 | 497 | 234 | 5 | 1 | 475 | 1 | 491 | 2.09e-156 | 454 |
| MS.gene83905.t1 | AT5G65380 | 50.109 | 459 | 226 | 3 | 13 | 469 | 25 | 482 | 3.28e-156 | 453 |
| MS.gene83905.t1 | AT4G00350 | 45.946 | 444 | 239 | 1 | 25 | 468 | 88 | 530 | 1.44e-144 | 425 |
| MS.gene83905.t1 | AT1G47530 | 45.679 | 486 | 249 | 5 | 3 | 475 | 1 | 484 | 1.84e-144 | 423 |
| MS.gene83905.t1 | AT5G10420 | 50.000 | 468 | 221 | 4 | 13 | 473 | 26 | 487 | 2.28e-144 | 423 |
| MS.gene83905.t1 | AT3G03620 | 46.596 | 470 | 243 | 4 | 13 | 477 | 23 | 489 | 1.56e-141 | 416 |
| MS.gene83905.t1 | AT3G03620 | 46.596 | 470 | 243 | 4 | 13 | 477 | 23 | 489 | 1.56e-141 | 416 |
| MS.gene83905.t1 | AT5G17700 | 45.474 | 475 | 249 | 4 | 6 | 471 | 7 | 480 | 5.62e-141 | 414 |
| MS.gene83905.t1 | AT5G17700 | 45.474 | 475 | 249 | 4 | 6 | 471 | 7 | 480 | 5.62e-141 | 414 |
| MS.gene83905.t1 | AT1G61890 | 46.368 | 468 | 244 | 3 | 7 | 468 | 25 | 491 | 7.48e-138 | 407 |
| MS.gene83905.t1 | AT1G11670 | 46.368 | 468 | 244 | 3 | 7 | 468 | 28 | 494 | 2.83e-136 | 403 |
| MS.gene83905.t1 | AT3G26590 | 46.067 | 445 | 238 | 2 | 25 | 468 | 45 | 488 | 3.74e-135 | 400 |
| MS.gene83905.t1 | AT1G61890 | 46.004 | 463 | 243 | 3 | 3 | 459 | 21 | 482 | 3.28e-134 | 397 |
| MS.gene83905.t1 | AT3G21690 | 45.877 | 473 | 249 | 4 | 5 | 475 | 35 | 502 | 4.44e-131 | 389 |
| MS.gene83905.t1 | AT4G25640 | 43.871 | 465 | 258 | 2 | 6 | 468 | 13 | 476 | 5.19e-131 | 389 |
| MS.gene83905.t1 | AT4G25640 | 43.312 | 471 | 264 | 2 | 1 | 469 | 8 | 477 | 1.62e-130 | 388 |
| MS.gene83905.t1 | AT5G38030 | 44.719 | 445 | 244 | 2 | 25 | 468 | 45 | 488 | 7.02e-130 | 386 |
| MS.gene83905.t1 | AT1G23300 | 46.517 | 445 | 236 | 2 | 25 | 468 | 44 | 487 | 9.23e-130 | 386 |
| MS.gene83905.t1 | AT1G12950 | 43.612 | 454 | 254 | 2 | 25 | 477 | 67 | 519 | 1.10e-129 | 387 |
| MS.gene83905.t1 | AT1G47530 | 48.346 | 393 | 201 | 2 | 84 | 475 | 1 | 392 | 4.64e-128 | 378 |
| MS.gene83905.t1 | AT4G25640 | 43.868 | 424 | 235 | 2 | 6 | 427 | 13 | 435 | 3.45e-120 | 360 |
| MS.gene83905.t1 | AT4G21910 | 43.376 | 468 | 257 | 4 | 7 | 468 | 33 | 498 | 7.25e-120 | 361 |
| MS.gene83905.t1 | AT4G21910 | 43.376 | 468 | 257 | 4 | 7 | 468 | 33 | 498 | 7.25e-120 | 361 |
| MS.gene83905.t1 | AT3G26590 | 46.373 | 386 | 206 | 1 | 84 | 468 | 1 | 386 | 1.21e-119 | 356 |
| MS.gene83905.t1 | AT4G21910 | 42.735 | 468 | 260 | 4 | 7 | 468 | 35 | 500 | 9.88e-119 | 358 |
| MS.gene83905.t1 | AT4G21910 | 42.735 | 468 | 260 | 4 | 7 | 468 | 35 | 500 | 9.88e-119 | 358 |
| MS.gene83905.t1 | AT3G59030 | 40.825 | 485 | 273 | 5 | 4 | 478 | 25 | 505 | 1.01e-117 | 355 |
| MS.gene83905.t1 | AT4G21903 | 44.836 | 426 | 231 | 3 | 45 | 468 | 73 | 496 | 9.72e-117 | 353 |
| MS.gene83905.t1 | AT1G61890 | 44.622 | 437 | 235 | 3 | 7 | 437 | 25 | 460 | 1.40e-116 | 351 |
| MS.gene83905.t1 | AT4G21903 | 44.000 | 425 | 234 | 3 | 45 | 467 | 73 | 495 | 1.73e-113 | 345 |
| MS.gene83905.t1 | AT4G21903 | 45.736 | 387 | 208 | 1 | 84 | 468 | 1 | 387 | 8.75e-113 | 339 |
| MS.gene83905.t1 | AT5G17700 | 44.697 | 396 | 209 | 4 | 6 | 392 | 7 | 401 | 2.08e-110 | 333 |
| MS.gene83905.t1 | AT3G59030 | 39.141 | 396 | 227 | 5 | 4 | 389 | 25 | 416 | 1.97e-83 | 264 |
| MS.gene83905.t1 | AT5G52450 | 34.526 | 475 | 293 | 7 | 3 | 466 | 1 | 468 | 1.30e-80 | 259 |
| MS.gene83905.t1 | AT2G34360 | 35.052 | 485 | 288 | 10 | 4 | 474 | 6 | 477 | 2.55e-80 | 258 |
| MS.gene83905.t1 | AT1G73700 | 35.532 | 470 | 291 | 7 | 3 | 465 | 1 | 465 | 3.62e-77 | 249 |
| MS.gene83905.t1 | AT1G71140 | 34.382 | 477 | 286 | 9 | 5 | 465 | 2 | 467 | 6.04e-76 | 247 |
| MS.gene83905.t1 | AT2G34360 | 33.884 | 484 | 253 | 12 | 4 | 474 | 6 | 435 | 1.30e-67 | 223 |
| MS.gene83905.t1 | AT2G04080 | 32.773 | 476 | 295 | 11 | 7 | 465 | 1 | 468 | 1.84e-67 | 224 |
| MS.gene83905.t1 | AT1G66780 | 35.129 | 427 | 260 | 8 | 48 | 465 | 58 | 476 | 1.98e-67 | 224 |
| MS.gene83905.t1 | AT2G04040 | 32.851 | 484 | 296 | 11 | 7 | 469 | 1 | 476 | 9.75e-67 | 222 |
| MS.gene83905.t1 | AT1G66760 | 32.211 | 475 | 304 | 8 | 3 | 465 | 1 | 469 | 1.63e-66 | 222 |
| MS.gene83905.t1 | AT1G66760 | 32.479 | 468 | 298 | 8 | 3 | 458 | 1 | 462 | 2.10e-66 | 221 |
| MS.gene83905.t1 | AT2G04080 | 32.627 | 472 | 293 | 11 | 7 | 461 | 1 | 464 | 2.65e-66 | 221 |
| MS.gene83905.t1 | AT1G15160 | 32.587 | 491 | 298 | 13 | 5 | 475 | 2 | 479 | 6.21e-65 | 218 |
| MS.gene83905.t1 | AT1G15150 | 31.493 | 489 | 306 | 11 | 5 | 475 | 2 | 479 | 6.73e-64 | 215 |
| MS.gene83905.t1 | AT2G04050 | 33.058 | 484 | 295 | 10 | 7 | 469 | 1 | 476 | 1.28e-63 | 214 |
| MS.gene83905.t1 | AT2G04070 | 32.563 | 476 | 296 | 9 | 7 | 465 | 1 | 468 | 1.52e-63 | 214 |
| MS.gene83905.t1 | AT1G64820 | 31.626 | 449 | 294 | 6 | 24 | 465 | 28 | 470 | 7.01e-63 | 213 |
| MS.gene83905.t1 | AT1G15170 | 31.134 | 485 | 304 | 11 | 1 | 465 | 1 | 475 | 8.00e-62 | 209 |
| MS.gene83905.t1 | AT3G23560 | 32.096 | 458 | 296 | 7 | 8 | 456 | 20 | 471 | 1.37e-61 | 209 |
| MS.gene83905.t1 | AT3G23550 | 32.805 | 442 | 280 | 8 | 24 | 456 | 30 | 463 | 2.83e-61 | 207 |
| MS.gene83905.t1 | AT2G04090 | 30.342 | 468 | 315 | 5 | 4 | 465 | 9 | 471 | 1.02e-56 | 196 |
| MS.gene83905.t1 | AT2G04100 | 30.303 | 462 | 307 | 6 | 12 | 465 | 17 | 471 | 3.12e-56 | 194 |
| MS.gene83905.t1 | AT2G04100 | 30.635 | 457 | 302 | 6 | 12 | 460 | 17 | 466 | 5.15e-56 | 194 |
| MS.gene83905.t1 | AT1G15180 | 32.000 | 450 | 289 | 9 | 25 | 465 | 35 | 476 | 7.45e-54 | 188 |
| MS.gene83905.t1 | AT1G15150 | 32.065 | 368 | 238 | 5 | 115 | 475 | 1 | 363 | 9.90e-51 | 177 |
| MS.gene83905.t1 | AT1G58340 | 26.483 | 472 | 329 | 5 | 4 | 462 | 30 | 496 | 6.75e-50 | 179 |
| MS.gene83905.t1 | AT1G15170 | 32.500 | 360 | 230 | 6 | 115 | 465 | 1 | 356 | 1.11e-49 | 174 |
| MS.gene83905.t1 | AT2G38510 | 25.862 | 464 | 332 | 6 | 21 | 477 | 2 | 460 | 3.28e-48 | 173 |
| MS.gene83905.t1 | AT1G66760 | 32.641 | 337 | 219 | 5 | 127 | 458 | 1 | 334 | 2.50e-45 | 162 |
| MS.gene83905.t1 | AT1G66760 | 30.576 | 399 | 259 | 8 | 3 | 389 | 1 | 393 | 3.43e-44 | 160 |
| MS.gene83905.t1 | AT3G23560 | 31.202 | 391 | 254 | 7 | 8 | 389 | 20 | 404 | 3.18e-42 | 155 |
| MS.gene83905.t1 | AT5G52050 | 25.306 | 490 | 319 | 8 | 3 | 462 | 7 | 479 | 6.56e-38 | 145 |
| MS.gene83905.t1 | AT5G19700 | 25.806 | 465 | 320 | 5 | 6 | 457 | 17 | 469 | 2.30e-37 | 144 |
| MS.gene83905.t1 | AT1G71870 | 23.689 | 515 | 354 | 12 | 3 | 488 | 1 | 505 | 7.83e-36 | 139 |
| MS.gene83905.t1 | AT4G29140 | 26.030 | 461 | 320 | 9 | 13 | 462 | 44 | 494 | 1.23e-33 | 134 |
| MS.gene83905.t1 | AT4G23030 | 25.431 | 464 | 328 | 5 | 24 | 477 | 31 | 486 | 2.41e-32 | 129 |
| MS.gene83905.t1 | AT5G49130 | 24.580 | 476 | 337 | 8 | 1 | 457 | 1 | 473 | 2.53e-29 | 120 |
| MS.gene83905.t1 | AT4G22790 | 24.646 | 495 | 340 | 13 | 2 | 480 | 9 | 486 | 3.00e-27 | 114 |
| MS.gene83905.t1 | AT1G15180 | 31.395 | 258 | 171 | 4 | 136 | 389 | 25 | 280 | 2.04e-25 | 108 |
| MS.gene83905.t1 | AT2G04066 | 39.200 | 125 | 75 | 1 | 342 | 465 | 39 | 163 | 4.25e-23 | 96.3 |
Find 97 sgRNAs with CRISPR-Local
Find 339 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCTCTTCTGTAGGGTATT+TGG | 0.178814 | 6.1:-8952209 | MS.gene83905:intron |
| TGTCATTAATATTGGGATTA+TGG | 0.191528 | 6.1:-8955439 | MS.gene83905:CDS |
| ATTGGTGTTGTTTACAATTT+AGG | 0.194685 | 6.1:-8952324 | MS.gene83905:CDS |
| TTGGAAGGGTTTCTCAGTTT+TGG | 0.238309 | 6.1:-8955366 | MS.gene83905:CDS |
| ATAGGTTGTTATTACCTAAT+TGG | 0.249961 | 6.1:-8952366 | MS.gene83905:CDS |
| CTGTTGGAGATTTATCATTT+TGG | 0.260277 | 6.1:-8953081 | MS.gene83905:CDS |
| AAGAGAAAATGCAGCTAAAT+AGG | 0.264252 | 6.1:+8955529 | None:intergenic |
| CAGATTTATAACTGGTATAT+TGG | 0.274489 | 6.1:-8957495 | MS.gene83905:intron |
| AATATGACCTGACCAATATT+TGG | 0.285632 | 6.1:+8955413 | None:intergenic |
| ATTTGGATTGGGATGTTGTT+TGG | 0.287275 | 6.1:-8952192 | MS.gene83905:CDS |
| AGTGATGATAATAAGCATTA+TGG | 0.289788 | 6.1:+8952155 | None:intergenic |
| TTCTGTAGGGTATTTGGATT+GGG | 0.295447 | 6.1:-8952203 | MS.gene83905:intron |
| TTTCCCAACCATTGATGTTT+AGG | 0.296003 | 6.1:+8953720 | None:intergenic |
| TTCACAAAAGTTTCAACATT+TGG | 0.302856 | 6.1:-8957605 | MS.gene83905:CDS |
| GGGAAGAAAGCAAGAAGATT+TGG | 0.306018 | 6.1:-8957649 | MS.gene83905:CDS |
| GGTATGGTACAGCTCAATTT+TGG | 0.307428 | 6.1:-8953934 | MS.gene83905:CDS |
| GGATTATGGTTACCAAATAT+TGG | 0.307935 | 6.1:-8955425 | MS.gene83905:CDS |
| TGCAATGATGTCATTAATAT+TGG | 0.308619 | 6.1:-8955447 | MS.gene83905:CDS |
| TGTCCAAATGCCTCTAAAAT+TGG | 0.308982 | 6.1:+8955677 | None:intergenic |
| ACAATTGCACTTTGGGCAAT+AGG | 0.332654 | 6.1:-8955626 | MS.gene83905:CDS |
| TTGACTGTTAAGTTTGAGTT+TGG | 0.338835 | 6.1:-8955479 | MS.gene83905:CDS |
| CTTCTGTAGGGTATTTGGAT+TGG | 0.342461 | 6.1:-8952204 | MS.gene83905:intron |
| GGGAGGAACAATTGCACTTT+GGG | 0.346887 | 6.1:-8955633 | MS.gene83905:CDS |
| CCCAGTGGAGAGTTAATAGA+TGG | 0.355441 | 6.1:-8951921 | MS.gene83905:CDS |
| ACTCTATGCAGATTTATAAC+TGG | 0.359668 | 6.1:-8957503 | MS.gene83905:CDS |
| CTGTTCATGTTCTGTTGTCT+TGG | 0.360376 | 6.1:-8955505 | MS.gene83905:CDS |
| TCATCACTCTTAAAACTGAT+TGG | 0.362176 | 6.1:-8952140 | MS.gene83905:CDS |
| GTGAAGCTCTCTTTCTCATC+TGG | 0.373034 | 6.1:-8955320 | MS.gene83905:CDS |
| GAGAAACCCTTCCAAGTATC+AGG | 0.383830 | 6.1:+8955374 | None:intergenic |
| CCCTTAGTTCTATGTCCATA+TGG | 0.391501 | 6.1:-8953875 | MS.gene83905:intron |
| GGAAGAAAGCAAGAAGATTT+GGG | 0.402710 | 6.1:-8957648 | MS.gene83905:CDS |
| CTCCAACAGGAATACCAATT+AGG | 0.414071 | 6.1:+8952352 | None:intergenic |
| AGAAAGAATCACTAAGGAAA+AGG | 0.416424 | 6.1:-8957676 | MS.gene83905:CDS |
| TGGGAAATGATGATTGCTCT+TGG | 0.422442 | 6.1:-8953704 | MS.gene83905:CDS |
| TTTGTGCTTGCAAGAATGTT+TGG | 0.431478 | 6.1:+8955570 | None:intergenic |
| ATAACTGCTCTCACATCATT+TGG | 0.433951 | 6.1:-8953190 | MS.gene83905:CDS |
| CATCACTCTTAAAACTGATT+GGG | 0.440673 | 6.1:-8952139 | MS.gene83905:CDS |
| TACCTAATTGGTATTCCTGT+TGG | 0.442463 | 6.1:-8952354 | MS.gene83905:CDS |
| ACACCAATCACTACTCCAAC+AGG | 0.443963 | 6.1:+8952339 | None:intergenic |
| GCAATGATGTCATTAATATT+GGG | 0.444498 | 6.1:-8955446 | MS.gene83905:CDS |
| ACACTTTGTGGACAAGCATA+TGG | 0.446907 | 6.1:-8955800 | MS.gene83905:CDS |
| AATCACTAAGGAAAAGGGTA+TGG | 0.454433 | 6.1:-8957670 | MS.gene83905:CDS |
| GTTCGAGTGGCAAATGAACT+TGG | 0.458869 | 6.1:-8953250 | MS.gene83905:CDS |
| TCTGCAAAAGCTTCTCCTCT+AGG | 0.462344 | 6.1:+8957699 | None:intergenic |
| GAGTGTATCTACAAAGATCT+TGG | 0.465546 | 6.1:-8955754 | MS.gene83905:CDS |
| ATAGGAGTTTCTGTTGGAGC+TGG | 0.466570 | 6.1:-8952417 | MS.gene83905:intron |
| ATTCCTGTTGGAGTAGTGAT+TGG | 0.466847 | 6.1:-8952342 | MS.gene83905:CDS |
| GCTCTCACATCATTTGGCAT+TGG | 0.469504 | 6.1:-8953184 | MS.gene83905:CDS |
| CAGCCTAAACATCAATGGTT+GGG | 0.472441 | 6.1:-8953723 | MS.gene83905:CDS |
| ATGGTTACCAAATATTGGTC+AGG | 0.473718 | 6.1:-8955420 | MS.gene83905:CDS |
| AAGTTTGAGTTTGGACTCAA+TGG | 0.474511 | 6.1:-8955470 | MS.gene83905:CDS |
| CCCATCTATTAACTCTCCAC+TGG | 0.475246 | 6.1:+8951920 | None:intergenic |
| TGTTTACAATTTAGGCATCA+AGG | 0.484105 | 6.1:-8952316 | MS.gene83905:intron |
| GAGAAAGAGAGCTTCACAAC+TGG | 0.484868 | 6.1:+8955326 | None:intergenic |
| AAGAAGATTTGGGTAGTGGC+AGG | 0.489654 | 6.1:-8957638 | MS.gene83905:CDS |
| TGGGAGGAACAATTGCACTT+TGG | 0.490737 | 6.1:-8955634 | MS.gene83905:CDS |
| GAAAGAATCACTAAGGAAAA+GGG | 0.493235 | 6.1:-8957675 | MS.gene83905:CDS |
| TGCAGAAGAAAGAATCACTA+AGG | 0.493372 | 6.1:-8957682 | MS.gene83905:CDS |
| TATTGCAGCCTAAACATCAA+TGG | 0.493889 | 6.1:-8953728 | MS.gene83905:intron |
| ACCATATGGACATAGAACTA+AGG | 0.499478 | 6.1:+8953874 | None:intergenic |
| AATAATGCTCAAGAATCAAA+TGG | 0.507126 | 6.1:-8951892 | MS.gene83905:CDS |
| GCAAAACAATACAACATGCT+TGG | 0.511054 | 6.1:-8955776 | MS.gene83905:CDS |
| AAGCAAGAAGATTTGGGTAG+TGG | 0.517470 | 6.1:-8957642 | MS.gene83905:CDS |
| GTGTAGTGAATATGTAAAGA+GGG | 0.523535 | 6.1:+8955699 | None:intergenic |
| TAAAACTGATTGGGACAAGC+AGG | 0.527120 | 6.1:-8952130 | MS.gene83905:intron |
| TTGTAAAATGCAGCTTGGGA+TGG | 0.529831 | 6.1:-8955837 | MS.gene83905:intron |
| TCTGATGTGGCTGATGCTGT+TGG | 0.532718 | 6.1:-8953097 | MS.gene83905:CDS |
| TAGGAGTTTCTGTTGGAGCT+GGG | 0.535671 | 6.1:-8952416 | MS.gene83905:CDS |
| GCAGCCTAAACATCAATGGT+TGG | 0.536922 | 6.1:-8953724 | MS.gene83905:intron |
| AGTGTCCAACCTGTACTCTC+TGG | 0.538070 | 6.1:-8953034 | MS.gene83905:intron |
| GGTGTAGTGAATATGTAAAG+AGG | 0.538389 | 6.1:+8955698 | None:intergenic |
| GCTTGGGATGGCAAGTGCAT+TGG | 0.539687 | 6.1:-8955825 | MS.gene83905:CDS |
| AGGTCATCATTCATTGCCAT+TGG | 0.540296 | 6.1:+8957719 | None:intergenic |
| CCATATGGACATAGAACTAA+GGG | 0.540663 | 6.1:+8953875 | None:intergenic |
| ATTGTAGCATATGTAAACAT+AGG | 0.552348 | 6.1:-8952384 | MS.gene83905:CDS |
| TGGCAACATGAAAGATGCTA+AGG | 0.553196 | 6.1:-8953901 | MS.gene83905:CDS |
| GCTCAAGAATCAAATGGCAG+TGG | 0.556270 | 6.1:-8951886 | MS.gene83905:CDS |
| ATCACTAAGGAAAAGGGTAT+GGG | 0.556437 | 6.1:-8957669 | MS.gene83905:CDS |
| ATTAATTTGCAGTGTTCGAG+TGG | 0.557278 | 6.1:-8953263 | MS.gene83905:intron |
| AAAATGTCCTGATACTTGGA+AGG | 0.557312 | 6.1:-8955381 | MS.gene83905:CDS |
| TCATAAATAGGAGTTTCTGT+TGG | 0.559101 | 6.1:-8952423 | MS.gene83905:intron |
| TCTCATCTGGAATCATGTTG+TGG | 0.563578 | 6.1:-8955307 | MS.gene83905:intron |
| CCATCTATTAACTCTCCACT+GGG | 0.565037 | 6.1:+8951921 | None:intergenic |
| AGTGCATTGGAAACACTTTG+TGG | 0.570276 | 6.1:-8955812 | MS.gene83905:CDS |
| TAGTGAATATGTAAAGAGGG+AGG | 0.579134 | 6.1:+8955702 | None:intergenic |
| TAGAGGTTACCAGAGAGTAC+AGG | 0.584592 | 6.1:+8953025 | None:intergenic |
| GTGGCAAATGAACTTGGAAG+AGG | 0.587916 | 6.1:-8953244 | MS.gene83905:CDS |
| TTTCACTTCAGATTCTGATG+TGG | 0.590850 | 6.1:-8953110 | MS.gene83905:CDS |
| AAATGTCCTGATACTTGGAA+GGG | 0.600883 | 6.1:-8955380 | MS.gene83905:CDS |
| TTGAGCTGTACCATACCTCA+AGG | 0.615430 | 6.1:+8953940 | None:intergenic |
| AGAAGATTTGGGTAGTGGCA+GGG | 0.619460 | 6.1:-8957637 | MS.gene83905:CDS |
| GACACAGCCATTGCAAAAGT+AGG | 0.641025 | 6.1:+8955602 | None:intergenic |
| CCAGTGGAGAGTTAATAGAT+GGG | 0.643174 | 6.1:-8951920 | MS.gene83905:CDS |
| GGCAATGAATGATGACCTAG+AGG | 0.643193 | 6.1:-8957714 | MS.gene83905:CDS |
| GAGTTTCTGTTGGAGCTGGG+TGG | 0.659899 | 6.1:-8952413 | MS.gene83905:CDS |
| GGTTACCAGAGAGTACAGGT+TGG | 0.690160 | 6.1:+8953029 | None:intergenic |
| TTCAGGTAGAGATAGCCCAG+TGG | 0.730416 | 6.1:-8951936 | MS.gene83905:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAAATTTAATAATTTTA+AGG | - | chr6.1:8952228-8952247 | MS.gene83905:intron | 0.0% |
| !! | AATATAACAATATCATAAAT+AGG | - | chr6.1:8957139-8957158 | MS.gene83905:intron | 10.0% |
| !! | ATAAATATCAAGAAATTAAA+TGG | + | chr6.1:8957542-8957561 | None:intergenic | 10.0% |
| !!! | ATAATTAACTTTACAAATTT+TGG | - | chr6.1:8952565-8952584 | MS.gene83905:intron | 10.0% |
| !!! | TTTTAAACAAACTTTTTAAA+TGG | + | chr6.1:8955502-8955521 | None:intergenic | 10.0% |
| !! | AAAAAACATATGTAACAAAT+GGG | - | chr6.1:8953276-8953295 | MS.gene83905:intron | 15.0% |
| !! | AAAAGTTAAATGTATTTAGT+TGG | - | chr6.1:8956058-8956077 | MS.gene83905:intron | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr6.1:8953424-8953443 | MS.gene83905:intron | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr6.1:8953425-8953444 | None:intergenic | 15.0% |
| !! | ACAAAATCCTAAATAATATT+AGG | - | chr6.1:8953642-8953661 | MS.gene83905:intron | 15.0% |
| !! | ACTAAAAATTCAAATGTATT+TGG | - | chr6.1:8956098-8956117 | MS.gene83905:intron | 15.0% |
| !! | ATAATAAACTATATCACTAT+AGG | + | chr6.1:8952124-8952143 | None:intergenic | 15.0% |
| !! | ATGATATAGTAAAAATAAAG+AGG | + | chr6.1:8957306-8957325 | None:intergenic | 15.0% |
| !! | ATTTATAAATATGAAAGTAG+AGG | + | chr6.1:8956569-8956588 | None:intergenic | 15.0% |
| !! | TAAAAAACATATGTAACAAA+TGG | - | chr6.1:8953275-8953294 | MS.gene83905:intron | 15.0% |
| !! | TGATATAGTAAAAATAAAGA+GGG | + | chr6.1:8957305-8957324 | None:intergenic | 15.0% |
| !! | TTCAAAAATTCAAATGTATT+TGG | + | chr6.1:8956135-8956154 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | - | chr6.1:8953551-8953570 | MS.gene83905:intron | 15.0% |
| !!! | GTATTTGAATTTTATTTTTC+AGG | - | chr6.1:8957621-8957640 | MS.gene83905:CDS | 15.0% |
| !!! | GTGATATAGTTTATTATTTT+TGG | - | chr6.1:8952127-8952146 | MS.gene83905:intron | 15.0% |
| !!! | TACATAATTTGTAAATGATA+AGG | - | chr6.1:8954364-8954383 | MS.gene83905:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr6.1:8953448-8953467 | MS.gene83905:intron | 15.0% |
| !!! | TTGTTTAAAATTTATGTTCA+AGG | - | chr6.1:8955512-8955531 | MS.gene83905:CDS | 15.0% |
| !!! | TTTTACACAAATGATTTATA+AGG | + | chr6.1:8956985-8957004 | None:intergenic | 15.0% |
| !! | AAAATATTTGCTTATATGTG+TGG | - | chr6.1:8952542-8952561 | MS.gene83905:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr6.1:8953434-8953453 | None:intergenic | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | - | chr6.1:8953391-8953410 | MS.gene83905:intron | 20.0% |
| !! | ATATTTATATCTCTTCTGTA+GGG | - | chr6.1:8957358-8957377 | MS.gene83905:intron | 20.0% |
| !! | ATCGAATAATAATTTCTGAT+CGG | + | chr6.1:8952383-8952402 | None:intergenic | 20.0% |
| !! | ATTAAACCAAGTCATAATAA+TGG | - | chr6.1:8957330-8957349 | MS.gene83905:intron | 20.0% |
| !! | CATTATTTACTTTGTTAAAG+TGG | - | chr6.1:8953705-8953724 | MS.gene83905:CDS | 20.0% |
| !! | GATATAGTAAAAATAAAGAG+GGG | + | chr6.1:8957304-8957323 | None:intergenic | 20.0% |
| !! | TACTTATATTTCATTTCAGA+TGG | - | chr6.1:8956162-8956181 | MS.gene83905:intron | 20.0% |
| !! | TATATTTATATCTCTTCTGT+AGG | - | chr6.1:8957357-8957376 | MS.gene83905:intron | 20.0% |
| !! | TGAAATTATGAAGCAAAATA+TGG | + | chr6.1:8955754-8955773 | None:intergenic | 20.0% |
| !!! | ATACTATTTTAGAATTGTGT+CGG | - | chr6.1:8955173-8955192 | MS.gene83905:intron | 20.0% |
| !!! | ATGTTTTAAGTCATTAAAGT+GGG | + | chr6.1:8953302-8953321 | None:intergenic | 20.0% |
| !!! | CATTGACATTTTTTATAAGT+AGG | - | chr6.1:8956663-8956682 | MS.gene83905:intron | 20.0% |
| !!! | CTATCTTAAATTTTTTGTAG+CGG | - | chr6.1:8954697-8954716 | MS.gene83905:intron | 20.0% |
| !!! | CTATTATTGTATTTTTCCAA+TGG | - | chr6.1:8957480-8957499 | MS.gene83905:intron | 20.0% |
| !!! | GCACTAATTTTAATTTGTTT+CGG | - | chr6.1:8953064-8953083 | MS.gene83905:CDS | 20.0% |
| !!! | TTTTCGTCCTAATATTATTT+AGG | + | chr6.1:8953652-8953671 | None:intergenic | 20.0% |
| ! | AAAATCAACTTGTAATGTGA+TGG | - | chr6.1:8955208-8955227 | MS.gene83905:intron | 25.0% |
| ! | AACACTTTCATTGAGTTAAT+TGG | + | chr6.1:8955301-8955320 | None:intergenic | 25.0% |
| ! | AATAATGCTCAAGAATCAAA+TGG | - | chr6.1:8957682-8957701 | MS.gene83905:CDS | 25.0% |
| ! | ACACTTTCATTGAGTTAATT+GGG | + | chr6.1:8955300-8955319 | None:intergenic | 25.0% |
| ! | ACCTAAATAATATTGTGTGT+TGG | + | chr6.1:8955397-8955416 | None:intergenic | 25.0% |
| ! | AGATAGAGAATTATACCATA+TGG | + | chr6.1:8955717-8955736 | None:intergenic | 25.0% |
| ! | AGTGATGATAATAAGCATTA+TGG | + | chr6.1:8957422-8957441 | None:intergenic | 25.0% |
| ! | ATGGAATATCAAACTCAAAT+TGG | + | chr6.1:8957523-8957542 | None:intergenic | 25.0% |
| ! | ATTGTAGCATATGTAAACAT+AGG | - | chr6.1:8957190-8957209 | MS.gene83905:intron | 25.0% |
| ! | CAGATTTATAACTGGTATAT+TGG | - | chr6.1:8952079-8952098 | MS.gene83905:intron | 25.0% |
| ! | CATAAAGTTCAAACATATCT+AGG | - | chr6.1:8955140-8955159 | MS.gene83905:intron | 25.0% |
| ! | GAAATAAATGATGAAACCAT+TGG | + | chr6.1:8957499-8957518 | None:intergenic | 25.0% |
| ! | GATTTATAAGGTGAAAACAT+TGG | + | chr6.1:8956973-8956992 | None:intergenic | 25.0% |
| ! | GCAATGATGTCATTAATATT+GGG | - | chr6.1:8954128-8954147 | MS.gene83905:intron | 25.0% |
| ! | GGTTAATTAAGTTATGTTGA+TGG | - | chr6.1:8955414-8955433 | MS.gene83905:CDS | 25.0% |
| ! | GTTAACACAATTTATACACT+TGG | + | chr6.1:8955480-8955499 | None:intergenic | 25.0% |
| ! | TATACACCATTATTATGACT+TGG | + | chr6.1:8957339-8957358 | None:intergenic | 25.0% |
| ! | TGCAATGATGTCATTAATAT+TGG | - | chr6.1:8954127-8954146 | MS.gene83905:intron | 25.0% |
| ! | TGTCATTAATATTGGGATTA+TGG | - | chr6.1:8954135-8954154 | MS.gene83905:intron | 25.0% |
| ! | TTATAAACACTACACATTCT+AGG | - | chr6.1:8954944-8954963 | MS.gene83905:intron | 25.0% |
| ! | TTCACAAAAGTTTCAACATT+TGG | - | chr6.1:8951969-8951988 | MS.gene83905:intron | 25.0% |
| ! | TTGACTGCACAAAATTTATT+AGG | + | chr6.1:8952433-8952452 | None:intergenic | 25.0% |
| !! | AATTAACTCAATGAAAGTGT+TGG | - | chr6.1:8955300-8955319 | MS.gene83905:intron | 25.0% |
| !! | AGAAAAAGTTGTTATTGCAT+TGG | - | chr6.1:8953511-8953530 | MS.gene83905:intron | 25.0% |
| !! | ATAATAACGCAAGCTTTTAT+TGG | - | chr6.1:8951999-8952018 | MS.gene83905:intron | 25.0% |
| !! | ATAGGTTGTTATTACCTAAT+TGG | - | chr6.1:8957208-8957227 | MS.gene83905:intron | 25.0% |
| !! | TCCAAAGTCTTAGAATTTTT+AGG | - | chr6.1:8954409-8954428 | MS.gene83905:intron | 25.0% |
| !!! | ACCTAAAAATTCTAAGACTT+TGG | + | chr6.1:8954413-8954432 | None:intergenic | 25.0% |
| !!! | ATTGGTGTTGTTTACAATTT+AGG | - | chr6.1:8957250-8957269 | MS.gene83905:intron | 25.0% |
| !!! | CATGTTTTAAGTCATTAAAG+TGG | + | chr6.1:8953303-8953322 | None:intergenic | 25.0% |
| !!! | CGATCAGAATTGTTTTATTT+TGG | - | chr6.1:8952516-8952535 | MS.gene83905:intron | 25.0% |
| !!! | GTATTTTGATCAGTTTGTAT+GGG | - | chr6.1:8952930-8952949 | MS.gene83905:intron | 25.0% |
| !!! | TCAATTTTGGTTCTTTTAAC+TGG | - | chr6.1:8955653-8955672 | MS.gene83905:CDS | 25.0% |
| AAACTTTGTAAAATGCAGCT+TGG | - | chr6.1:8953732-8953751 | MS.gene83905:intron | 30.0% | |
| AACTTTGTAAAATGCAGCTT+GGG | - | chr6.1:8953733-8953752 | MS.gene83905:intron | 30.0% | |
| AAGAGAAAATGCAGCTAAAT+AGG | + | chr6.1:8954048-8954067 | None:intergenic | 30.0% | |
| AATATGACCTGACCAATATT+TGG | + | chr6.1:8954164-8954183 | None:intergenic | 30.0% | |
| AATTAGTGCAACCTATAGTT+TGG | + | chr6.1:8953053-8953072 | None:intergenic | 30.0% | |
| ACTCTATGCAGATTTATAAC+TGG | - | chr6.1:8952071-8952090 | MS.gene83905:intron | 30.0% | |
| AGAAAGAATCACTAAGGAAA+AGG | - | chr6.1:8951898-8951917 | MS.gene83905:CDS | 30.0% | |
| AGACAAAAAAATTGCACAAG+TGG | - | chr6.1:8953920-8953939 | MS.gene83905:CDS | 30.0% | |
| CAACGTGAGTTAATTTATGT+AGG | - | chr6.1:8952865-8952884 | MS.gene83905:intron | 30.0% | |
| CATCACTCTTAAAACTGATT+GGG | - | chr6.1:8957435-8957454 | MS.gene83905:intron | 30.0% | |
| CCTTTACAAGCCTATTTAAA+AGG | + | chr6.1:8954450-8954469 | None:intergenic | 30.0% | |
| CTAAAAATTACAAGACTGCA+TGG | - | chr6.1:8952180-8952199 | MS.gene83905:CDS | 30.0% | |
| CTACATAAATTAACTCACGT+TGG | + | chr6.1:8952867-8952886 | None:intergenic | 30.0% | |
| CTATGGTCTAAAAAGATACA+AGG | - | chr6.1:8953612-8953631 | MS.gene83905:intron | 30.0% | |
| GAAAGAATCACTAAGGAAAA+GGG | - | chr6.1:8951899-8951918 | MS.gene83905:CDS | 30.0% | |
| GACAAAAAAATTGCACAAGT+GGG | - | chr6.1:8953921-8953940 | MS.gene83905:CDS | 30.0% | |
| GCCAACACACAATATTATTT+AGG | - | chr6.1:8955393-8955412 | MS.gene83905:CDS | 30.0% | |
| GCTTTATGTACTTGTTCTTT+GGG | - | chr6.1:8953092-8953111 | MS.gene83905:CDS | 30.0% | |
| GGATTATGGTTACCAAATAT+TGG | - | chr6.1:8954149-8954168 | MS.gene83905:intron | 30.0% | |
| GTAACCTAAATGTCGTAATT+AGG | - | chr6.1:8955337-8955356 | MS.gene83905:CDS | 30.0% | |
| GTGTAGTGAATATGTAAAGA+GGG | + | chr6.1:8953878-8953897 | None:intergenic | 30.0% | |
| GTGTGATTGTTGTAAATCTT+GGG | + | chr6.1:8956703-8956722 | None:intergenic | 30.0% | |
| TCATAAATAGGAGTTTCTGT+TGG | - | chr6.1:8957151-8957170 | MS.gene83905:intron | 30.0% | |
| TCATCACTCTTAAAACTGAT+TGG | - | chr6.1:8957434-8957453 | MS.gene83905:intron | 30.0% | |
| TCCAAATGAATTAAGAAGCA+AGG | + | chr6.1:8955793-8955812 | None:intergenic | 30.0% | |
| TCCTTGCTTCTTAATTCATT+TGG | - | chr6.1:8955789-8955808 | MS.gene83905:CDS | 30.0% | |
| TCGATCCAAAAAACAATCAT+CGG | - | chr6.1:8952398-8952417 | MS.gene83905:CDS | 30.0% | |
| TCTGATCGCACAAAATTTAT+CGG | + | chr6.1:8952504-8952523 | None:intergenic | 30.0% | |
| TGAAAAAATGTCCTGATACT+TGG | - | chr6.1:8954189-8954208 | MS.gene83905:intron | 30.0% | |
| TGCTTTATGTACTTGTTCTT+TGG | - | chr6.1:8953091-8953110 | MS.gene83905:CDS | 30.0% | |
| TGGCAATTCAACATTCATTA+TGG | + | chr6.1:8955377-8955396 | None:intergenic | 30.0% | |
| TGTGTGATTGTTGTAAATCT+TGG | + | chr6.1:8956704-8956723 | None:intergenic | 30.0% | |
| TGTTTACAATTTAGGCATCA+AGG | - | chr6.1:8957258-8957277 | MS.gene83905:intron | 30.0% | |
| TTGAAAATTTGCCTCTTCTT+TGG | - | chr6.1:8952313-8952332 | MS.gene83905:intron | 30.0% | |
| TTTATGAACATACACACTCT+AGG | - | chr6.1:8954486-8954505 | MS.gene83905:intron | 30.0% | |
| ! | AGATATGACTTGTGTGTATA+AGG | + | chr6.1:8954767-8954786 | None:intergenic | 30.0% |
| ! | AGTTCAAACATATCTAGGAT+AGG | - | chr6.1:8955145-8955164 | MS.gene83905:intron | 30.0% |
| ! | ATTCACTACACCAATTTTAG+AGG | - | chr6.1:8953887-8953906 | MS.gene83905:CDS | 30.0% |
| ! | CCTTTTAAATAGGCTTGTAA+AGG | - | chr6.1:8954447-8954466 | MS.gene83905:intron | 30.0% |
| ! | CTGTTGGAGATTTATCATTT+TGG | - | chr6.1:8956493-8956512 | MS.gene83905:intron | 30.0% |
| ! | GAAACTTTTGTGAATATTGC+AGG | + | chr6.1:8951963-8951982 | None:intergenic | 30.0% |
| ! | TATTCTTCACTCTATTTTCG+AGG | - | chr6.1:8953008-8953027 | MS.gene83905:intron | 30.0% |
| ! | TTACGACATTTAGGTTACTT+TGG | + | chr6.1:8955335-8955354 | None:intergenic | 30.0% |
| ! | TTATTCTTTTTACAGCCTTG+AGG | - | chr6.1:8955619-8955638 | MS.gene83905:CDS | 30.0% |
| ! | TTGACTGTTAAGTTTGAGTT+TGG | - | chr6.1:8954095-8954114 | MS.gene83905:intron | 30.0% |
| ! | TTTGAAAGTTTGAGTTACCA+TGG | + | chr6.1:8954894-8954913 | None:intergenic | 30.0% |
| !! | AACTTTCAAATAGCCTTGTA+AGG | - | chr6.1:8954904-8954923 | MS.gene83905:intron | 30.0% |
| !! | CATGCAGTCTTGTAATTTTT+AGG | + | chr6.1:8952182-8952201 | None:intergenic | 30.0% |
| !! | GCTTTTATTGGTCATTTTGT+TGG | - | chr6.1:8952011-8952030 | MS.gene83905:intron | 30.0% |
| !! | TCTATTTTCGAGGATTTAGT+AGG | - | chr6.1:8953018-8953037 | MS.gene83905:intron | 30.0% |
| !!! | AGAAGTGAACGTTTTTTGTT+GGG | + | chr6.1:8952628-8952647 | None:intergenic | 30.0% |
| !!! | GGTATTTTGATCAGTTTGTA+TGG | - | chr6.1:8952929-8952948 | MS.gene83905:intron | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr6.1:8953343-8953362 | MS.gene83905:intron | 30.0% |
| !!! | TTTTGGCTTTCAAAGATCTT+TGG | - | chr6.1:8954225-8954244 | MS.gene83905:intron | 30.0% |
| AAAAAAATTGCACAAGTGGG+AGG | - | chr6.1:8953924-8953943 | MS.gene83905:CDS | 35.0% | |
| AAAACCGTCATTGCGTTAAT+TGG | + | chr6.1:8954826-8954845 | None:intergenic | 35.0% | |
| AAAATGTCCTGATACTTGGA+AGG | - | chr6.1:8954193-8954212 | MS.gene83905:intron | 35.0% | |
| AAACCGTCATTGCGTTAATT+GGG | + | chr6.1:8954825-8954844 | None:intergenic | 35.0% | |
| AAATGTCCTGATACTTGGAA+GGG | - | chr6.1:8954194-8954213 | MS.gene83905:intron | 35.0% | |
| AATCACTAAGGAAAAGGGTA+TGG | - | chr6.1:8951904-8951923 | MS.gene83905:CDS | 35.0% | |
| AATGCCACAATTATGCTACT+AGG | - | chr6.1:8955040-8955059 | MS.gene83905:intron | 35.0% | |
| ACAAAGACATTCATTGTGCT+TGG | + | chr6.1:8954999-8955018 | None:intergenic | 35.0% | |
| ACACAAATGCCACAATTATG+CGG | - | chr6.1:8954577-8954596 | MS.gene83905:intron | 35.0% | |
| ACCATATGGACATAGAACTA+AGG | + | chr6.1:8955703-8955722 | None:intergenic | 35.0% | |
| ACTACACATTCTAGGCAATA+TGG | - | chr6.1:8954952-8954971 | MS.gene83905:intron | 35.0% | |
| ACTGACACATTAATTGTGCT+TGG | + | chr6.1:8954541-8954560 | None:intergenic | 35.0% | |
| ATAACTGCTCTCACATCATT+TGG | - | chr6.1:8956384-8956403 | MS.gene83905:intron | 35.0% | |
| ATGAACAATCACCAAAGAAG+AGG | + | chr6.1:8952327-8952346 | None:intergenic | 35.0% | |
| ATGGTTACCAAATATTGGTC+AGG | - | chr6.1:8954154-8954173 | MS.gene83905:intron | 35.0% | |
| CACAATTATGCTACTAGGAT+AGG | - | chr6.1:8955045-8955064 | MS.gene83905:intron | 35.0% | |
| CCATATGGACATAGAACTAA+GGG | + | chr6.1:8955702-8955721 | None:intergenic | 35.0% | |
| CCTATTTAAAAGGTCGAGTT+AGG | + | chr6.1:8954440-8954459 | None:intergenic | 35.0% | |
| CGATCCAAAAAACAATCATC+GGG | - | chr6.1:8952399-8952418 | MS.gene83905:CDS | 35.0% | |
| CTACACATTCTAGGCAATAT+GGG | - | chr6.1:8954953-8954972 | MS.gene83905:intron | 35.0% | |
| CTATCCTAGTAGCATAATTG+TGG | + | chr6.1:8955047-8955066 | None:intergenic | 35.0% | |
| GACTTGTGTGTATAAGGTTT+GGG | + | chr6.1:8954761-8954780 | None:intergenic | 35.0% | |
| GAGTGTATCTACAAAGATCT+TGG | - | chr6.1:8953820-8953839 | MS.gene83905:intron | 35.0% | |
| GCAAAACAATACAACATGCT+TGG | - | chr6.1:8953798-8953817 | MS.gene83905:intron | 35.0% | |
| GGAAGAAAGCAAGAAGATTT+GGG | - | chr6.1:8951926-8951945 | MS.gene83905:CDS | 35.0% | |
| GGTGTAGTGAATATGTAAAG+AGG | + | chr6.1:8953879-8953898 | None:intergenic | 35.0% | |
| GTGCAGTCAAAAGTTACTAT+CGG | - | chr6.1:8952443-8952462 | MS.gene83905:intron | 35.0% | |
| TACACACAAGTCATATCTCT+AGG | - | chr6.1:8954769-8954788 | MS.gene83905:intron | 35.0% | |
| TACACACAAGTCATATCTGT+AGG | - | chr6.1:8955245-8955264 | MS.gene83905:intron | 35.0% | |
| TACATGAGTTAACTCACACT+AGG | + | chr6.1:8952772-8952791 | None:intergenic | 35.0% | |
| TACCTAATTGGTATTCCTGT+TGG | - | chr6.1:8957220-8957239 | MS.gene83905:intron | 35.0% | |
| TAGTGAATATGTAAAGAGGG+AGG | + | chr6.1:8953875-8953894 | None:intergenic | 35.0% | |
| TAGTGTGAGTTAACTCATGT+AGG | - | chr6.1:8952771-8952790 | MS.gene83905:intron | 35.0% | |
| TATTGCAGCCTAAACATCAA+TGG | - | chr6.1:8955846-8955865 | MS.gene83905:intron | 35.0% | |
| TCTAACAAAACCAGCTTCTA+AGG | - | chr6.1:8954726-8954745 | MS.gene83905:intron | 35.0% | |
| TGAAAATTCCACCTTCATTG+TGG | + | chr6.1:8954613-8954632 | None:intergenic | 35.0% | |
| TGAACAATCTTCACCTTACA+AGG | + | chr6.1:8954920-8954939 | None:intergenic | 35.0% | |
| TGCAGAAGAAAGAATCACTA+AGG | - | chr6.1:8951892-8951911 | MS.gene83905:CDS | 35.0% | |
| TTATGTATTGTCCACCTTTC+AGG | + | chr6.1:8955125-8955144 | None:intergenic | 35.0% | |
| TTTCACTTCAGATTCTGATG+TGG | - | chr6.1:8956464-8956483 | MS.gene83905:intron | 35.0% | |
| TTTCCCAACCATTGATGTTT+AGG | + | chr6.1:8955857-8955876 | None:intergenic | 35.0% | |
| TTTGTGCTTGCAAGAATGTT+TGG | + | chr6.1:8954007-8954026 | None:intergenic | 35.0% | |
| ! | AAGTTTGAGTTTGGACTCAA+TGG | - | chr6.1:8954104-8954123 | MS.gene83905:intron | 35.0% |
| ! | AATTAACGCAATGACGGTTT+TGG | - | chr6.1:8954825-8954844 | MS.gene83905:intron | 35.0% |
| ! | ATCACTAAGGAAAAGGGTAT+GGG | - | chr6.1:8951905-8951924 | MS.gene83905:CDS | 35.0% |
| ! | ATTTGGATTGGGATGTTGTT+TGG | - | chr6.1:8957382-8957401 | MS.gene83905:intron | 35.0% |
| ! | CCTAACTCGACCTTTTAAAT+AGG | - | chr6.1:8954437-8954456 | MS.gene83905:intron | 35.0% |
| ! | CTTCTTTGGTGATTGTTCAT+AGG | - | chr6.1:8952327-8952346 | MS.gene83905:CDS | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr6.1:8953473-8953492 | MS.gene83905:intron | 35.0% |
| ! | TATCTCTTCTGTAGGGTATT+TGG | - | chr6.1:8957365-8957384 | MS.gene83905:intron | 35.0% |
| ! | TGACTTGTGTGTATAAGGTT+TGG | + | chr6.1:8954762-8954781 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr6.1:8953477-8953496 | MS.gene83905:intron | 35.0% |
| ! | TTACAAGACTGCATGGTTTT+AGG | - | chr6.1:8952187-8952206 | MS.gene83905:CDS | 35.0% |
| ! | TTCTGTAGGGTATTTGGATT+GGG | - | chr6.1:8957371-8957390 | MS.gene83905:intron | 35.0% |
| !! | AAAACCAGCTTCTAAGGTAA+TGG | - | chr6.1:8954732-8954751 | MS.gene83905:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr6.1:8953577-8953596 | MS.gene83905:intron | 35.0% |
| !! | AAGTTTTTGAGCGATGTGAT+GGG | - | chr6.1:8952477-8952496 | MS.gene83905:intron | 35.0% |
| !! | AATAGGTCCTACTTTTGCAA+TGG | - | chr6.1:8953965-8953984 | MS.gene83905:intron | 35.0% |
| !! | ATTAATTGTGCTTGGTGTGA+AGG | + | chr6.1:8954533-8954552 | None:intergenic | 35.0% |
| !! | ATTAATTTGCAGTGTTCGAG+TGG | - | chr6.1:8956311-8956330 | MS.gene83905:intron | 35.0% |
| !! | TAACTCAATGAAAGTGTTGG+AGG | - | chr6.1:8955303-8955322 | MS.gene83905:intron | 35.0% |
| !! | TACAAGACTGCATGGTTTTA+GGG | - | chr6.1:8952188-8952207 | MS.gene83905:CDS | 35.0% |
| !! | TGTCCAAATGCCTCTAAAAT+TGG | + | chr6.1:8953900-8953919 | None:intergenic | 35.0% |
| !! | TTAATTGTGCTTGGTGTGAA+GGG | + | chr6.1:8954532-8954551 | None:intergenic | 35.0% |
| !! | TTCTGATCGGTTCATTTTAG+AGG | + | chr6.1:8952370-8952389 | None:intergenic | 35.0% |
| !!! | ACACCAATTTTAGAGGCATT+TGG | - | chr6.1:8953894-8953913 | MS.gene83905:CDS | 35.0% |
| !!! | ATGACCCGATGATTGTTTTT+TGG | + | chr6.1:8952406-8952425 | None:intergenic | 35.0% |
| !!! | CAGAAGTGAACGTTTTTTGT+TGG | + | chr6.1:8952629-8952648 | None:intergenic | 35.0% |
| !!! | GACACTCATTTTGAAACAGA+GGG | + | chr6.1:8953338-8953357 | None:intergenic | 35.0% |
| AACCGTCATTGCGTTAATTG+GGG | + | chr6.1:8954824-8954843 | None:intergenic | 40.0% | |
| AACGGAGGGAGTAATTTCTA+TGG | - | chr6.1:8953595-8953614 | MS.gene83905:intron | 40.0% | |
| AAGCAAGAAGATTTGGGTAG+TGG | - | chr6.1:8951932-8951951 | MS.gene83905:CDS | 40.0% | |
| ACAATTGCACTTTGGGCAAT+AGG | - | chr6.1:8953948-8953967 | MS.gene83905:intron | 40.0% | |
| ACACTTTGTGGACAAGCATA+TGG | - | chr6.1:8953774-8953793 | MS.gene83905:intron | 40.0% | |
| ACATTAGCATCTTTGTCTCG+AGG | + | chr6.1:8955571-8955590 | None:intergenic | 40.0% | |
| AGTCATATCTCTAGGCAATG+AGG | - | chr6.1:8954777-8954796 | MS.gene83905:intron | 40.0% | |
| AGTCATATCTGTAGGCAATG+AGG | - | chr6.1:8955253-8955272 | MS.gene83905:intron | 40.0% | |
| AGTGCATTGGAAACACTTTG+TGG | - | chr6.1:8953762-8953781 | MS.gene83905:intron | 40.0% | |
| ATACACACTCTAGGCAACAT+GGG | - | chr6.1:8954495-8954514 | MS.gene83905:intron | 40.0% | |
| ATTCCTGTTGGAGTAGTGAT+TGG | - | chr6.1:8957232-8957251 | MS.gene83905:intron | 40.0% | |
| CAATAAGCTCGAACATGAAG+GGG | + | chr6.1:8954641-8954660 | None:intergenic | 40.0% | |
| CACATCGCTCAAAAACTTCT+CGG | + | chr6.1:8952475-8952494 | None:intergenic | 40.0% | |
| CAGCCTAAACATCAATGGTT+GGG | - | chr6.1:8955851-8955870 | MS.gene83905:intron | 40.0% | |
| CATGTGAGTTAACTCACGTT+CGG | + | chr6.1:8952906-8952925 | None:intergenic | 40.0% | |
| CCAATAAGCTCGAACATGAA+GGG | + | chr6.1:8954642-8954661 | None:intergenic | 40.0% | |
| CCAGTGGAGAGTTAATAGAT+GGG | - | chr6.1:8957654-8957673 | MS.gene83905:CDS | 40.0% | |
| CCATCTATTAACTCTCCACT+GGG | + | chr6.1:8957656-8957675 | None:intergenic | 40.0% | |
| CCTTCATGTTCGAGCTTATT+GGG | - | chr6.1:8954640-8954659 | MS.gene83905:intron | 40.0% | |
| CGTGAGTTAACTCACATGAA+AGG | - | chr6.1:8952908-8952927 | MS.gene83905:intron | 40.0% | |
| CTCCAACAGGAATACCAATT+AGG | + | chr6.1:8957225-8957244 | None:intergenic | 40.0% | |
| CTGTTCATGTTCTGTTGTCT+TGG | - | chr6.1:8954069-8954088 | MS.gene83905:intron | 40.0% | |
| GCAAGCCTATTACGTCATTT+GGG | + | chr6.1:8954869-8954888 | None:intergenic | 40.0% | |
| GCTGCCTAATTACGACATTT+AGG | + | chr6.1:8955344-8955363 | None:intergenic | 40.0% | |
| GGGAAGAAAGCAAGAAGATT+TGG | - | chr6.1:8951925-8951944 | MS.gene83905:CDS | 40.0% | |
| GGTAACCCAAATGACGTAAT+AGG | - | chr6.1:8954861-8954880 | MS.gene83905:intron | 40.0% | |
| GGTTGAGTCTTCCAAACTAT+AGG | - | chr6.1:8953039-8953058 | MS.gene83905:CDS | 40.0% | |
| GTTAATTGGGTGTGAATGAG+TGG | + | chr6.1:8955287-8955306 | None:intergenic | 40.0% | |
| TAAAACTGATTGGGACAAGC+AGG | - | chr6.1:8957444-8957463 | MS.gene83905:intron | 40.0% | |
| TACTTGAGTTATCTCACGCT+GGG | + | chr6.1:8952836-8952855 | None:intergenic | 40.0% | |
| TAGAGGTTGAACAATCGATG+CGG | + | chr6.1:8952353-8952372 | None:intergenic | 40.0% | |
| TGCAAGCCTATTACGTCATT+TGG | + | chr6.1:8954870-8954889 | None:intergenic | 40.0% | |
| TGGCAACATGAAAGATGCTA+AGG | - | chr6.1:8955673-8955692 | MS.gene83905:CDS | 40.0% | |
| TGGGAAATGATGATTGCTCT+TGG | - | chr6.1:8955870-8955889 | MS.gene83905:intron | 40.0% | |
| TTAAGTCACGTTCGCTACAT+TGG | - | chr6.1:8952711-8952730 | MS.gene83905:intron | 40.0% | |
| TTAATTGGGGTGGGAATGAA+TGG | + | chr6.1:8954811-8954830 | None:intergenic | 40.0% | |
| TTGTAAAATGCAGCTTGGGA+TGG | - | chr6.1:8953737-8953756 | MS.gene83905:intron | 40.0% | |
| TTGTGTGACTTAAGTCACGT+GGG | + | chr6.1:8952672-8952691 | None:intergenic | 40.0% | |
| ! | AAGGGTGACATATCTAGGAT+AGG | - | chr6.1:8954666-8954685 | MS.gene83905:intron | 40.0% |
| ! | CTTCTGTAGGGTATTTGGAT+TGG | - | chr6.1:8957370-8957389 | MS.gene83905:intron | 40.0% |
| ! | CTTTTTACAGCCTTGAGGTA+TGG | - | chr6.1:8955624-8955643 | MS.gene83905:CDS | 40.0% |
| ! | GGTATGGTACAGCTCAATTT+TGG | - | chr6.1:8955640-8955659 | MS.gene83905:CDS | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr6.1:8953476-8953495 | MS.gene83905:intron | 40.0% |
| ! | TCTCATCTGGAATCATGTTG+TGG | - | chr6.1:8954267-8954286 | MS.gene83905:intron | 40.0% |
| ! | TTGGAAGGGTTTCTCAGTTT+TGG | - | chr6.1:8954208-8954227 | MS.gene83905:intron | 40.0% |
| !! | AGTTTTTGAGCGATGTGATG+GGG | - | chr6.1:8952478-8952497 | MS.gene83905:intron | 40.0% |
| !! | CCCTTAGTTCTATGTCCATA+TGG | - | chr6.1:8955699-8955718 | MS.gene83905:CDS | 40.0% |
| !! | GAAGTTTTTGAGCGATGTGA+TGG | - | chr6.1:8952476-8952495 | MS.gene83905:intron | 40.0% |
| !! | TAATTGTGCTTGGTGTGAAG+GGG | + | chr6.1:8954531-8954550 | None:intergenic | 40.0% |
| !! | TTCATTGTGCTTGGTGTGAA+CGG | + | chr6.1:8954990-8955009 | None:intergenic | 40.0% |
| !!! | CGACACTCATTTTGAAACAG+AGG | + | chr6.1:8953339-8953358 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr6.1:8953581-8953600 | MS.gene83905:intron | 40.0% |
| !!! | TTTTTTGCTGCAGCTAGGTT+AGG | - | chr6.1:8955894-8955913 | MS.gene83905:intron | 40.0% |
| AATGCCACAATTATGCGGCT+AGG | - | chr6.1:8954582-8954601 | MS.gene83905:intron | 45.0% | |
| ACACCAATCACTACTCCAAC+AGG | + | chr6.1:8957238-8957257 | None:intergenic | 45.0% | |
| ACATGAGTTAACTCACGCTG+AGG | + | chr6.1:8952803-8952822 | None:intergenic | 45.0% | |
| ACGTAATAGGCTTGCAACCA+TGG | - | chr6.1:8954874-8954893 | MS.gene83905:intron | 45.0% | |
| ACTTGAGTTATCTCACGCTG+GGG | + | chr6.1:8952835-8952854 | None:intergenic | 45.0% | |
| ATAGGAGTTTCTGTTGGAGC+TGG | - | chr6.1:8957157-8957176 | MS.gene83905:intron | 45.0% | |
| ATGCCACAATTATGCGGCTA+GGG | - | chr6.1:8954583-8954602 | MS.gene83905:intron | 45.0% | |
| CACCCCAATTAACGCAATGA+CGG | - | chr6.1:8954819-8954838 | MS.gene83905:intron | 45.0% | |
| CAGCGTGAGATAACTCAAGT+AGG | - | chr6.1:8952835-8952854 | MS.gene83905:intron | 45.0% | |
| CAGCGTGAGTTAACTCATGT+AGG | - | chr6.1:8952803-8952822 | MS.gene83905:intron | 45.0% | |
| CATACACACTCTAGGCAACA+TGG | - | chr6.1:8954494-8954513 | MS.gene83905:intron | 45.0% | |
| CCCAATAAGCTCGAACATGA+AGG | + | chr6.1:8954643-8954662 | None:intergenic | 45.0% | |
| CCCAGTGGAGAGTTAATAGA+TGG | - | chr6.1:8957653-8957672 | MS.gene83905:CDS | 45.0% | |
| CCCATCTATTAACTCTCCAC+TGG | + | chr6.1:8957657-8957676 | None:intergenic | 45.0% | |
| CCCTTCATGTTCGAGCTTAT+TGG | - | chr6.1:8954639-8954658 | MS.gene83905:intron | 45.0% | |
| CTACTTGAGTTATCTCACGC+TGG | + | chr6.1:8952837-8952856 | None:intergenic | 45.0% | |
| CTAGGATAGGACCACAATGA+AGG | - | chr6.1:8955058-8955077 | MS.gene83905:intron | 45.0% | |
| GACACAGCCATTGCAAAAGT+AGG | + | chr6.1:8953975-8953994 | None:intergenic | 45.0% | |
| GAGAAACCCTTCCAAGTATC+AGG | + | chr6.1:8954203-8954222 | None:intergenic | 45.0% | |
| GAGAAAGAGAGCTTCACAAC+TGG | + | chr6.1:8954251-8954270 | None:intergenic | 45.0% | |
| GCAGCCTAAACATCAATGGT+TGG | - | chr6.1:8955850-8955869 | MS.gene83905:intron | 45.0% | |
| GCTCAAGAATCAAATGGCAG+TGG | - | chr6.1:8957688-8957707 | MS.gene83905:CDS | 45.0% | |
| GCTCTCACATCATTTGGCAT+TGG | - | chr6.1:8956390-8956409 | MS.gene83905:intron | 45.0% | |
| GGCAATGAATGATGACCTAG+AGG | - | chr6.1:8951860-8951879 | MS.gene83905:CDS | 45.0% | |
| GGGAGGAACAATTGCACTTT+GGG | - | chr6.1:8953941-8953960 | MS.gene83905:CDS | 45.0% | |
| GTCATTGCGTTAATTGGGGT+GGG | + | chr6.1:8954820-8954839 | None:intergenic | 45.0% | |
| GTGAAGCTCTCTTTCTCATC+TGG | - | chr6.1:8954254-8954273 | MS.gene83905:intron | 45.0% | |
| GTGGCAAATGAACTTGGAAG+AGG | - | chr6.1:8956330-8956349 | MS.gene83905:intron | 45.0% | |
| GTTCGAGTGGCAAATGAACT+TGG | - | chr6.1:8956324-8956343 | MS.gene83905:intron | 45.0% | |
| GTTGTGTGACTTAAGTCACG+TGG | + | chr6.1:8952673-8952692 | None:intergenic | 45.0% | |
| TACACACTCTAGGCAACATG+GGG | - | chr6.1:8954496-8954515 | MS.gene83905:intron | 45.0% | |
| TAGAGTGAACCACAAGTCGT+TGG | + | chr6.1:8956736-8956755 | None:intergenic | 45.0% | |
| TAGGAGTTTCTGTTGGAGCT+GGG | - | chr6.1:8957158-8957177 | MS.gene83905:intron | 45.0% | |
| TCTGCAAAAGCTTCTCCTCT+AGG | + | chr6.1:8951878-8951897 | None:intergenic | 45.0% | |
| TGGGAGGAACAATTGCACTT+TGG | - | chr6.1:8953940-8953959 | MS.gene83905:CDS | 45.0% | |
| TGTGTGACTTAAGTCACGTG+GGG | + | chr6.1:8952671-8952690 | None:intergenic | 45.0% | |
| TTCGAGCTTATTGGGCAGAA+GGG | - | chr6.1:8954648-8954667 | MS.gene83905:intron | 45.0% | |
| TTGAGCTGTACCATACCTCA+AGG | + | chr6.1:8955637-8955656 | None:intergenic | 45.0% | |
| ! | AAGAAGATTTGGGTAGTGGC+AGG | - | chr6.1:8951936-8951955 | MS.gene83905:intron | 45.0% |
| ! | AGAAGATTTGGGTAGTGGCA+GGG | - | chr6.1:8951937-8951956 | MS.gene83905:intron | 45.0% |
| ! | TAGAGGTTACCAGAGAGTAC+AGG | + | chr6.1:8956552-8956571 | None:intergenic | 45.0% |
| ! | TTACGTCATTTGGGTTACCC+TGG | + | chr6.1:8954860-8954879 | None:intergenic | 45.0% |
| !! | TCATTGTGCTTGGTGTGAAC+GGG | + | chr6.1:8954989-8955008 | None:intergenic | 45.0% |
| !!! | ACTGCATGGTTTTAGGGCAT+AGG | - | chr6.1:8952194-8952213 | MS.gene83905:CDS | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr6.1:8953580-8953599 | MS.gene83905:intron | 45.0% |
| !!! | CTGCATGGTTTTAGGGCATA+GGG | - | chr6.1:8952195-8952214 | MS.gene83905:CDS | 45.0% |
| !!! | TAAGTCACGTGGGGGTATTT+TGG | + | chr6.1:8952662-8952681 | None:intergenic | 45.0% |
| !!! | TTGGCTTTTTTGCTGCAGCT+AGG | - | chr6.1:8955889-8955908 | MS.gene83905:intron | 45.0% |
| !!! | TGTTTATATTTTATTTTAAA+GGG | + | chr6.1:8956028-8956047 | None:intergenic | 5.0% |
| !!! | TTGTTTATATTTTATTTTAA+AGG | + | chr6.1:8956029-8956048 | None:intergenic | 5.0% |
| AAGCTCGAACATGAAGGGGT+GGG | + | chr6.1:8954637-8954656 | None:intergenic | 50.0% | |
| AGTGTCCAACCTGTACTCTC+TGG | - | chr6.1:8956540-8956559 | MS.gene83905:intron | 50.0% | |
| CGTCATTGCGTTAATTGGGG+TGG | + | chr6.1:8954821-8954840 | None:intergenic | 50.0% | |
| CTGCGTGAGTTAACTCACCT+GGG | + | chr6.1:8952742-8952761 | None:intergenic | 50.0% | |
| GCAGCCATTACCTTAGAAGC+TGG | + | chr6.1:8954739-8954758 | None:intergenic | 50.0% | |
| GGATAGGACCACAATGAAGG+TGG | - | chr6.1:8955061-8955080 | MS.gene83905:intron | 50.0% | |
| GGCAGAAGGGTGACATATCT+AGG | - | chr6.1:8954661-8954680 | MS.gene83905:intron | 50.0% | |
| GTGTGACTTAAGTCACGTGG+GGG | + | chr6.1:8952670-8952689 | None:intergenic | 50.0% | |
| GTTCGAGCTTATTGGGCAGA+AGG | - | chr6.1:8954647-8954666 | MS.gene83905:intron | 50.0% | |
| TAAGCTCGAACATGAAGGGG+TGG | + | chr6.1:8954638-8954657 | None:intergenic | 50.0% | |
| TCAACACACCCCCTCATGTT+CGG | - | chr6.1:8955089-8955108 | MS.gene83905:intron | 50.0% | |
| TCGCTACATTGGTACATCCC+AGG | - | chr6.1:8952722-8952741 | MS.gene83905:intron | 50.0% | |
| TCTGATGTGGCTGATGCTGT+TGG | - | chr6.1:8956477-8956496 | MS.gene83905:intron | 50.0% | |
| TTCAGGTAGAGATAGCCCAG+TGG | - | chr6.1:8957638-8957657 | MS.gene83905:CDS | 50.0% | |
| ! | GGTTACCAGAGAGTACAGGT+TGG | + | chr6.1:8956548-8956567 | None:intergenic | 50.0% |
| ! | TGTTCAAGGTGTCAGCTCAG+TGG | - | chr6.1:8955526-8955545 | MS.gene83905:CDS | 50.0% |
| !!! | GGTTTTGGAAGTTGCAGCCA+GGG | - | chr6.1:8954840-8954859 | MS.gene83905:intron | 50.0% |
| AGGGTGGACCACAATGAAGG+TGG | - | chr6.1:8954602-8954621 | MS.gene83905:intron | 55.0% | |
| CAACACACCCCCTCATGTTC+GGG | - | chr6.1:8955090-8955109 | MS.gene83905:intron | 55.0% | |
| CACTACGCACCAACGACTTG+TGG | - | chr6.1:8956724-8956743 | MS.gene83905:intron | 55.0% | |
| CATTGTGCCCGAACATGAGG+GGG | + | chr6.1:8955100-8955119 | None:intergenic | 55.0% | |
| CCACAATTATGCGGCTAGGG+TGG | - | chr6.1:8954586-8954605 | MS.gene83905:intron | 55.0% | |
| CCACCCTAGCCGCATAATTG+TGG | + | chr6.1:8954589-8954608 | None:intergenic | 55.0% | |
| CCAGGTGAGTTAACTCACGC+AGG | - | chr6.1:8952740-8952759 | MS.gene83905:intron | 55.0% | |
| CCATTGTGCCCGAACATGAG+GGG | + | chr6.1:8955101-8955120 | None:intergenic | 55.0% | |
| CCCATTGTGCCCGAACATGA+GGG | + | chr6.1:8955102-8955121 | None:intergenic | 55.0% | |
| CCCTCATGTTCGGGCACAAT+GGG | - | chr6.1:8955099-8955118 | MS.gene83905:intron | 55.0% | |
| CCTGCGTGAGTTAACTCACC+TGG | + | chr6.1:8952743-8952762 | None:intergenic | 55.0% | |
| GAGTTTCTGTTGGAGCTGGG+TGG | - | chr6.1:8957161-8957180 | MS.gene83905:intron | 55.0% | |
| GCTAGGGTGGACCACAATGA+AGG | - | chr6.1:8954599-8954618 | MS.gene83905:intron | 55.0% | |
| GCTTGGGATGGCAAGTGCAT+TGG | - | chr6.1:8953749-8953768 | MS.gene83905:intron | 55.0% | |
| !! | TTGTGCTTGGTGTGAACGGG+TGG | + | chr6.1:8954986-8955005 | None:intergenic | 55.0% |
| !! | TTGTGCTTGGTGTGAAGGGG+TGG | + | chr6.1:8954528-8954547 | None:intergenic | 55.0% |
| !!! | CGGTTTTGGAAGTTGCAGCC+AGG | - | chr6.1:8954839-8954858 | MS.gene83905:intron | 55.0% |
| CCCCTCATGTTCGGGCACAA+TGG | - | chr6.1:8955098-8955117 | MS.gene83905:intron | 60.0% | |
| GCCCATTGTGCCCGAACATG+AGG | + | chr6.1:8955103-8955122 | None:intergenic | 60.0% | |
| GGCACAATGGGCCTGAAAGG+TGG | - | chr6.1:8955111-8955130 | MS.gene83905:intron | 60.0% | |
| TCGGGCACAATGGGCCTGAA+AGG | - | chr6.1:8955108-8955127 | MS.gene83905:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 8951858 | 8957738 | 8951858 | ID=MS.gene83905 |
| chr6.1 | mRNA | 8951858 | 8957738 | 8951858 | ID=MS.gene83905.t1;Parent=MS.gene83905 |
| chr6.1 | exon | 8957496 | 8957738 | 8957496 | ID=MS.gene83905.t1.exon1;Parent=MS.gene83905.t1 |
| chr6.1 | CDS | 8957496 | 8957738 | 8957496 | ID=cds.MS.gene83905.t1;Parent=MS.gene83905.t1 |
| chr6.1 | exon | 8955308 | 8955846 | 8955308 | ID=MS.gene83905.t1.exon2;Parent=MS.gene83905.t1 |
| chr6.1 | CDS | 8955308 | 8955846 | 8955308 | ID=cds.MS.gene83905.t1;Parent=MS.gene83905.t1 |
| chr6.1 | exon | 8953876 | 8953962 | 8953876 | ID=MS.gene83905.t1.exon3;Parent=MS.gene83905.t1 |
| chr6.1 | CDS | 8953876 | 8953962 | 8953876 | ID=cds.MS.gene83905.t1;Parent=MS.gene83905.t1 |
| chr6.1 | exon | 8953686 | 8953742 | 8953686 | ID=MS.gene83905.t1.exon4;Parent=MS.gene83905.t1 |
| chr6.1 | CDS | 8953686 | 8953742 | 8953686 | ID=cds.MS.gene83905.t1;Parent=MS.gene83905.t1 |
| chr6.1 | exon | 8953035 | 8953273 | 8953035 | ID=MS.gene83905.t1.exon5;Parent=MS.gene83905.t1 |
| chr6.1 | CDS | 8953035 | 8953273 | 8953035 | ID=cds.MS.gene83905.t1;Parent=MS.gene83905.t1 |
| chr6.1 | exon | 8952317 | 8952435 | 8952317 | ID=MS.gene83905.t1.exon6;Parent=MS.gene83905.t1 |
| chr6.1 | CDS | 8952317 | 8952435 | 8952317 | ID=cds.MS.gene83905.t1;Parent=MS.gene83905.t1 |
| chr6.1 | exon | 8952131 | 8952217 | 8952131 | ID=MS.gene83905.t1.exon7;Parent=MS.gene83905.t1 |
| chr6.1 | CDS | 8952131 | 8952217 | 8952131 | ID=cds.MS.gene83905.t1;Parent=MS.gene83905.t1 |
| chr6.1 | exon | 8951858 | 8951953 | 8951858 | ID=MS.gene83905.t1.exon8;Parent=MS.gene83905.t1 |
| chr6.1 | CDS | 8951858 | 8951953 | 8951858 | ID=cds.MS.gene83905.t1;Parent=MS.gene83905.t1 |
| Gene Sequence |
| Protein sequence |
