Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83904.t1 | XP_013451494.1 | 96 | 498 | 20 | 0 | 1 | 498 | 3 | 500 | 2.00E-263 | 917.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83904.t1 | Q8W488 | 61.3 | 478 | 182 | 3 | 12 | 487 | 12 | 488 | 1.3e-162 | 574.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83904.t1 | A0A072U775 | 96.0 | 498 | 20 | 0 | 1 | 498 | 3 | 500 | 1.4e-263 | 917.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene83904 | MS.gene55576 | PPI |
MS.gene83904 | MS.gene042536 | PPI |
MS.gene83904 | MS.gene47231 | PPI |
MS.gene83904 | MS.gene41838 | PPI |
MS.gene62346 | MS.gene83904 | PPI |
MS.gene55578 | MS.gene83904 | PPI |
MS.gene83904 | MS.gene83905 | PPI |
MS.gene83904 | MS.gene41836 | PPI |
MS.gene83904 | MS.gene029498 | PPI |
MS.gene83904 | MS.gene058644 | PPI |
MS.gene83904 | MS.gene029501 | PPI |
MS.gene83904 | MS.gene55578 | PPI |
MS.gene83904 | MS.gene054821 | PPI |
MS.gene042539 | MS.gene83904 | PPI |
MS.gene83904 | MS.gene47232 | PPI |
MS.gene83904 | MS.gene62346 | PPI |
MS.gene83904 | MS.gene55577 | PPI |
MS.gene71749 | MS.gene83904 | PPI |
MS.gene83904 | MS.gene023921 | PPI |
MS.gene83904 | MS.gene73453 | PPI |
MS.gene83904 | MS.gene013876 | PPI |
MS.gene013873 | MS.gene83904 | PPI |
MS.gene83904 | MS.gene41839 | PPI |
MS.gene83904 | MS.gene042535 | PPI |
MS.gene013875 | MS.gene83904 | PPI |
MS.gene83904 | MS.gene71750 | PPI |
MS.gene83904 | MS.gene013874 | PPI |
MS.gene042538 | MS.gene83904 | PPI |
MS.gene83904 | MS.gene62347 | PPI |
MS.gene83904 | MS.gene73451 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83904.t1 | MTR_6g027200 | 95.984 | 498 | 20 | 0 | 1 | 498 | 3 | 500 | 0.0 | 938 |
MS.gene83904.t1 | MTR_6g027190 | 80.120 | 498 | 87 | 2 | 1 | 498 | 3 | 488 | 0.0 | 749 |
MS.gene83904.t1 | MTR_7g087400 | 74.220 | 481 | 121 | 2 | 9 | 489 | 7 | 484 | 0.0 | 733 |
MS.gene83904.t1 | MTR_7g087410 | 67.965 | 462 | 146 | 2 | 27 | 487 | 24 | 484 | 0.0 | 649 |
MS.gene83904.t1 | MTR_7g087370 | 67.360 | 481 | 125 | 3 | 9 | 489 | 7 | 455 | 0.0 | 647 |
MS.gene83904.t1 | MTR_7g087410 | 67.848 | 395 | 126 | 1 | 94 | 487 | 1 | 395 | 0.0 | 563 |
MS.gene83904.t1 | MTR_7g087430 | 68.193 | 393 | 124 | 1 | 94 | 485 | 1 | 393 | 0.0 | 550 |
MS.gene83904.t1 | MTR_5g032720 | 51.082 | 462 | 223 | 3 | 26 | 485 | 28 | 488 | 9.76e-166 | 478 |
MS.gene83904.t1 | MTR_3g099700 | 50.630 | 476 | 225 | 5 | 13 | 484 | 30 | 499 | 3.25e-160 | 464 |
MS.gene83904.t1 | MTR_5g032750 | 46.570 | 481 | 238 | 5 | 15 | 486 | 19 | 489 | 1.17e-154 | 449 |
MS.gene83904.t1 | MTR_3g099720 | 47.109 | 467 | 245 | 2 | 15 | 480 | 22 | 487 | 5.86e-145 | 425 |
MS.gene83904.t1 | MTR_8g069470 | 43.542 | 480 | 269 | 2 | 15 | 493 | 31 | 509 | 7.18e-144 | 423 |
MS.gene83904.t1 | MTR_1g021740 | 45.396 | 467 | 248 | 4 | 23 | 483 | 22 | 487 | 1.51e-143 | 421 |
MS.gene83904.t1 | MTR_1g100180 | 45.887 | 462 | 246 | 3 | 29 | 488 | 38 | 497 | 1.29e-140 | 414 |
MS.gene83904.t1 | MTR_5g033100 | 43.776 | 482 | 264 | 4 | 11 | 487 | 34 | 513 | 3.38e-136 | 403 |
MS.gene83904.t1 | MTR_4g048000 | 46.004 | 463 | 247 | 2 | 18 | 478 | 48 | 509 | 1.58e-134 | 399 |
MS.gene83904.t1 | MTR_2g088400 | 46.436 | 463 | 245 | 2 | 18 | 478 | 36 | 497 | 2.18e-134 | 398 |
MS.gene83904.t1 | MTR_2g022980 | 45.714 | 455 | 244 | 2 | 26 | 478 | 40 | 493 | 1.16e-130 | 388 |
MS.gene83904.t1 | MTR_6g047610 | 39.746 | 473 | 280 | 5 | 16 | 486 | 12 | 481 | 2.85e-117 | 353 |
MS.gene83904.t1 | MTR_2g088400 | 45.667 | 427 | 229 | 2 | 18 | 442 | 36 | 461 | 1.50e-115 | 348 |
MS.gene83904.t1 | MTR_6g047640 | 38.622 | 479 | 278 | 3 | 16 | 486 | 12 | 482 | 1.63e-114 | 347 |
MS.gene83904.t1 | MTR_6g047640 | 36.743 | 479 | 268 | 4 | 16 | 486 | 12 | 463 | 4.24e-107 | 327 |
MS.gene83904.t1 | MTR_6g047590 | 38.280 | 465 | 282 | 5 | 16 | 478 | 12 | 473 | 5.21e-105 | 322 |
MS.gene83904.t1 | MTR_5g090290 | 39.958 | 478 | 279 | 3 | 15 | 485 | 22 | 498 | 1.66e-103 | 321 |
MS.gene83904.t1 | MTR_8g063590 | 38.559 | 472 | 274 | 6 | 19 | 476 | 28 | 497 | 1.19e-97 | 304 |
MS.gene83904.t1 | MTR_6g081410 | 35.032 | 471 | 297 | 5 | 19 | 483 | 10 | 477 | 2.34e-88 | 279 |
MS.gene83904.t1 | MTR_6g081780 | 34.557 | 463 | 294 | 5 | 19 | 475 | 10 | 469 | 1.51e-82 | 264 |
MS.gene83904.t1 | MTR_6g081300 | 34.110 | 472 | 296 | 7 | 29 | 492 | 5 | 469 | 3.15e-82 | 263 |
MS.gene83904.t1 | MTR_1g108810 | 32.680 | 459 | 306 | 2 | 14 | 470 | 14 | 471 | 1.14e-80 | 259 |
MS.gene83904.t1 | MTR_6g066380 | 36.161 | 448 | 270 | 9 | 37 | 475 | 31 | 471 | 6.11e-78 | 252 |
MS.gene83904.t1 | MTR_6g081390 | 33.045 | 463 | 296 | 7 | 29 | 483 | 7 | 463 | 9.17e-78 | 251 |
MS.gene83904.t1 | MTR_6g081810 | 33.839 | 461 | 275 | 6 | 17 | 475 | 11 | 443 | 3.73e-77 | 249 |
MS.gene83904.t1 | MTR_7g082810 | 34.549 | 466 | 296 | 4 | 29 | 489 | 15 | 476 | 1.62e-76 | 248 |
MS.gene83904.t1 | MTR_5g087930 | 37.123 | 431 | 245 | 7 | 59 | 485 | 51 | 459 | 1.95e-76 | 248 |
MS.gene83904.t1 | MTR_2g079020 | 32.898 | 459 | 299 | 3 | 16 | 466 | 13 | 470 | 3.27e-76 | 248 |
MS.gene83904.t1 | MTR_6g081400 | 31.957 | 460 | 305 | 4 | 29 | 483 | 10 | 466 | 7.27e-75 | 244 |
MS.gene83904.t1 | MTR_2g078930 | 32.898 | 459 | 298 | 4 | 16 | 466 | 20 | 476 | 2.60e-74 | 243 |
MS.gene83904.t1 | MTR_6g081240 | 32.589 | 448 | 287 | 7 | 29 | 468 | 5 | 445 | 4.34e-73 | 238 |
MS.gene83904.t1 | MTR_2g078970 | 32.244 | 459 | 302 | 3 | 16 | 466 | 7 | 464 | 1.36e-71 | 236 |
MS.gene83904.t1 | MTR_2g078960 | 33.407 | 452 | 297 | 3 | 18 | 466 | 16 | 466 | 4.37e-71 | 234 |
MS.gene83904.t1 | MTR_8g106670 | 32.468 | 462 | 297 | 9 | 22 | 477 | 4 | 456 | 5.38e-71 | 234 |
MS.gene83904.t1 | MTR_1g108840 | 31.697 | 489 | 314 | 8 | 1 | 475 | 1 | 483 | 1.98e-69 | 230 |
MS.gene83904.t1 | MTR_6g004220 | 31.236 | 461 | 303 | 6 | 23 | 475 | 12 | 466 | 7.97e-68 | 226 |
MS.gene83904.t1 | MTR_6g004220 | 31.498 | 454 | 297 | 6 | 23 | 468 | 19 | 466 | 5.47e-66 | 221 |
MS.gene83904.t1 | MTR_6g081310 | 32.688 | 465 | 276 | 8 | 29 | 475 | 5 | 450 | 1.56e-65 | 219 |
MS.gene83904.t1 | MTR_1g109060 | 32.613 | 463 | 297 | 6 | 23 | 475 | 9 | 466 | 1.94e-61 | 208 |
MS.gene83904.t1 | MTR_7g082800 | 31.948 | 385 | 258 | 2 | 94 | 475 | 1 | 384 | 2.02e-61 | 206 |
MS.gene83904.t1 | MTR_1g109060 | 32.755 | 461 | 295 | 6 | 23 | 473 | 9 | 464 | 1.19e-60 | 207 |
MS.gene83904.t1 | MTR_5g090280 | 33.493 | 418 | 236 | 6 | 94 | 479 | 1 | 408 | 1.04e-59 | 202 |
MS.gene83904.t1 | MTR_1g108990 | 31.250 | 448 | 299 | 5 | 33 | 475 | 24 | 467 | 2.15e-59 | 203 |
MS.gene83904.t1 | MTR_3g111020 | 27.551 | 490 | 336 | 7 | 9 | 486 | 22 | 504 | 5.84e-57 | 198 |
MS.gene83904.t1 | MTR_2g078990 | 34.138 | 290 | 189 | 1 | 179 | 466 | 4 | 293 | 1.28e-49 | 173 |
MS.gene83904.t1 | MTR_5g067460 | 26.176 | 489 | 344 | 6 | 10 | 487 | 27 | 509 | 1.64e-49 | 178 |
MS.gene83904.t1 | MTR_5g010830 | 25.214 | 468 | 329 | 3 | 17 | 473 | 48 | 505 | 8.58e-49 | 176 |
MS.gene83904.t1 | MTR_0039s0080 | 26.489 | 487 | 332 | 8 | 12 | 485 | 17 | 490 | 2.20e-46 | 169 |
MS.gene83904.t1 | MTR_1g101500 | 26.464 | 461 | 328 | 5 | 19 | 473 | 49 | 504 | 6.37e-46 | 168 |
MS.gene83904.t1 | MTR_4g027920 | 25.647 | 464 | 332 | 6 | 31 | 484 | 153 | 613 | 5.83e-45 | 167 |
MS.gene83904.t1 | MTR_6g043810 | 26.625 | 477 | 327 | 9 | 14 | 473 | 2 | 472 | 2.13e-41 | 155 |
MS.gene83904.t1 | MTR_6g043810 | 26.625 | 477 | 327 | 9 | 14 | 473 | 12 | 482 | 2.70e-41 | 155 |
MS.gene83904.t1 | MTR_6g004220 | 29.091 | 385 | 259 | 7 | 23 | 399 | 19 | 397 | 6.31e-41 | 153 |
MS.gene83904.t1 | MTR_2g079030 | 36.923 | 195 | 123 | 0 | 272 | 466 | 319 | 513 | 5.08e-36 | 140 |
MS.gene83904.t1 | MTR_6g088805 | 25.495 | 455 | 321 | 3 | 26 | 472 | 19 | 463 | 1.76e-35 | 138 |
MS.gene83904.t1 | MTR_5g011540 | 27.938 | 451 | 303 | 7 | 34 | 472 | 43 | 483 | 1.15e-33 | 133 |
MS.gene83904.t1 | MTR_8g102430 | 25.862 | 464 | 306 | 10 | 18 | 472 | 8 | 442 | 8.30e-31 | 124 |
MS.gene83904.t1 | MTR_2g435930 | 21.822 | 472 | 342 | 5 | 18 | 467 | 3 | 469 | 1.95e-28 | 118 |
MS.gene83904.t1 | MTR_6g004220 | 28.618 | 304 | 203 | 7 | 23 | 318 | 19 | 316 | 3.79e-27 | 112 |
MS.gene83904.t1 | MTR_4g131290 | 47.273 | 55 | 29 | 0 | 107 | 161 | 13 | 67 | 6.00e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83904.t1 | AT1G33110 | 61.297 | 478 | 182 | 3 | 12 | 487 | 12 | 488 | 0.0 | 608 |
MS.gene83904.t1 | AT1G33100 | 59.329 | 477 | 190 | 3 | 12 | 487 | 12 | 485 | 0.0 | 593 |
MS.gene83904.t1 | AT1G33080 | 59.918 | 489 | 193 | 3 | 1 | 487 | 1 | 488 | 0.0 | 582 |
MS.gene83904.t1 | AT1G33090 | 57.260 | 489 | 206 | 3 | 1 | 487 | 1 | 488 | 0.0 | 569 |
MS.gene83904.t1 | AT1G33080 | 62.309 | 459 | 170 | 3 | 12 | 468 | 12 | 469 | 0.0 | 569 |
MS.gene83904.t1 | AT1G33110 | 61.832 | 393 | 147 | 3 | 12 | 402 | 12 | 403 | 1.23e-172 | 492 |
MS.gene83904.t1 | AT5G65380 | 50.535 | 467 | 227 | 4 | 17 | 480 | 18 | 483 | 1.64e-157 | 457 |
MS.gene83904.t1 | AT5G44050 | 48.847 | 477 | 231 | 4 | 16 | 485 | 21 | 491 | 1.40e-156 | 454 |
MS.gene83904.t1 | AT1G47530 | 46.105 | 475 | 246 | 4 | 10 | 478 | 8 | 478 | 6.67e-147 | 429 |
MS.gene83904.t1 | AT5G10420 | 49.041 | 469 | 234 | 4 | 17 | 482 | 20 | 486 | 1.26e-144 | 424 |
MS.gene83904.t1 | AT3G03620 | 46.008 | 476 | 252 | 4 | 16 | 487 | 16 | 490 | 1.59e-143 | 421 |
MS.gene83904.t1 | AT3G03620 | 46.008 | 476 | 252 | 4 | 16 | 487 | 16 | 490 | 1.59e-143 | 421 |
MS.gene83904.t1 | AT4G00350 | 45.946 | 444 | 239 | 1 | 35 | 478 | 88 | 530 | 8.32e-143 | 421 |
MS.gene83904.t1 | AT5G17700 | 44.731 | 465 | 253 | 3 | 17 | 478 | 14 | 477 | 3.98e-138 | 407 |
MS.gene83904.t1 | AT5G17700 | 44.731 | 465 | 253 | 3 | 17 | 478 | 14 | 477 | 3.98e-138 | 407 |
MS.gene83904.t1 | AT1G11670 | 47.534 | 446 | 231 | 2 | 35 | 478 | 50 | 494 | 5.49e-138 | 407 |
MS.gene83904.t1 | AT3G26590 | 46.517 | 445 | 236 | 2 | 35 | 478 | 45 | 488 | 1.38e-136 | 404 |
MS.gene83904.t1 | AT1G61890 | 45.671 | 462 | 244 | 3 | 23 | 478 | 31 | 491 | 8.98e-136 | 402 |
MS.gene83904.t1 | AT1G23300 | 44.699 | 481 | 263 | 3 | 9 | 487 | 17 | 496 | 1.09e-134 | 399 |
MS.gene83904.t1 | AT1G12950 | 44.273 | 454 | 251 | 2 | 35 | 487 | 67 | 519 | 1.88e-134 | 399 |
MS.gene83904.t1 | AT5G38030 | 45.843 | 445 | 239 | 2 | 35 | 478 | 45 | 488 | 3.31e-133 | 395 |
MS.gene83904.t1 | AT4G25640 | 45.572 | 463 | 250 | 2 | 17 | 478 | 15 | 476 | 6.64e-132 | 391 |
MS.gene83904.t1 | AT1G61890 | 45.695 | 453 | 239 | 3 | 23 | 469 | 31 | 482 | 1.16e-131 | 391 |
MS.gene83904.t1 | AT4G25640 | 44.703 | 472 | 259 | 2 | 17 | 487 | 15 | 485 | 2.26e-131 | 391 |
MS.gene83904.t1 | AT3G21690 | 46.739 | 460 | 241 | 3 | 28 | 485 | 45 | 502 | 2.51e-131 | 390 |
MS.gene83904.t1 | AT1G47530 | 48.446 | 386 | 198 | 1 | 94 | 478 | 1 | 386 | 6.77e-127 | 375 |
MS.gene83904.t1 | AT4G21910 | 42.644 | 469 | 259 | 5 | 23 | 485 | 39 | 503 | 1.51e-120 | 363 |
MS.gene83904.t1 | AT4G21910 | 42.644 | 469 | 259 | 5 | 23 | 485 | 39 | 503 | 1.51e-120 | 363 |
MS.gene83904.t1 | AT4G21910 | 42.340 | 470 | 261 | 5 | 23 | 486 | 41 | 506 | 3.23e-120 | 362 |
MS.gene83904.t1 | AT4G21910 | 42.340 | 470 | 261 | 5 | 23 | 486 | 41 | 506 | 3.23e-120 | 362 |
MS.gene83904.t1 | AT4G25640 | 45.498 | 422 | 228 | 2 | 17 | 437 | 15 | 435 | 6.15e-120 | 360 |
MS.gene83904.t1 | AT3G26590 | 46.891 | 386 | 204 | 1 | 94 | 478 | 1 | 386 | 1.41e-119 | 357 |
MS.gene83904.t1 | AT4G21903 | 43.649 | 433 | 237 | 4 | 55 | 485 | 73 | 500 | 5.03e-116 | 351 |
MS.gene83904.t1 | AT1G61890 | 44.084 | 431 | 234 | 3 | 23 | 447 | 31 | 460 | 3.78e-114 | 345 |
MS.gene83904.t1 | AT3G59030 | 38.645 | 502 | 285 | 6 | 9 | 490 | 8 | 506 | 4.90e-112 | 341 |
MS.gene83904.t1 | AT4G21903 | 43.059 | 425 | 238 | 3 | 55 | 477 | 73 | 495 | 1.63e-111 | 340 |
MS.gene83904.t1 | AT4G21903 | 44.416 | 394 | 214 | 2 | 94 | 485 | 1 | 391 | 4.63e-111 | 335 |
MS.gene83904.t1 | AT5G17700 | 43.959 | 389 | 214 | 3 | 17 | 402 | 14 | 401 | 8.65e-109 | 329 |
MS.gene83904.t1 | AT5G52450 | 33.811 | 488 | 305 | 7 | 1 | 483 | 1 | 475 | 2.02e-81 | 261 |
MS.gene83904.t1 | AT3G59030 | 35.766 | 411 | 242 | 5 | 9 | 399 | 8 | 416 | 3.54e-77 | 248 |
MS.gene83904.t1 | AT2G34360 | 34.647 | 482 | 278 | 16 | 25 | 489 | 16 | 477 | 3.06e-76 | 248 |
MS.gene83904.t1 | AT1G73700 | 34.681 | 470 | 293 | 7 | 24 | 487 | 13 | 474 | 1.60e-75 | 246 |
MS.gene83904.t1 | AT1G71140 | 33.403 | 476 | 295 | 8 | 9 | 475 | 5 | 467 | 2.39e-70 | 232 |
MS.gene83904.t1 | AT1G66760 | 31.453 | 461 | 309 | 4 | 19 | 475 | 12 | 469 | 6.19e-68 | 226 |
MS.gene83904.t1 | AT1G66780 | 32.988 | 482 | 310 | 9 | 1 | 475 | 1 | 476 | 6.01e-67 | 223 |
MS.gene83904.t1 | AT1G66760 | 31.718 | 454 | 303 | 4 | 19 | 468 | 12 | 462 | 7.91e-67 | 223 |
MS.gene83904.t1 | AT2G04080 | 32.258 | 465 | 300 | 8 | 23 | 475 | 7 | 468 | 3.57e-66 | 221 |
MS.gene83904.t1 | AT3G23550 | 32.251 | 462 | 300 | 6 | 14 | 466 | 6 | 463 | 7.37e-65 | 218 |
MS.gene83904.t1 | AT2G04080 | 32.104 | 461 | 298 | 8 | 23 | 471 | 7 | 464 | 4.49e-64 | 215 |
MS.gene83904.t1 | AT3G23560 | 33.042 | 457 | 293 | 6 | 19 | 466 | 19 | 471 | 1.01e-63 | 214 |
MS.gene83904.t1 | AT2G04040 | 31.011 | 445 | 300 | 6 | 35 | 475 | 27 | 468 | 2.03e-63 | 214 |
MS.gene83904.t1 | AT2G34360 | 32.143 | 476 | 256 | 14 | 25 | 489 | 16 | 435 | 4.84e-63 | 212 |
MS.gene83904.t1 | AT2G04070 | 31.081 | 444 | 301 | 4 | 35 | 475 | 27 | 468 | 4.42e-61 | 207 |
MS.gene83904.t1 | AT1G64820 | 29.844 | 449 | 302 | 7 | 34 | 475 | 28 | 470 | 5.61e-61 | 208 |
MS.gene83904.t1 | AT1G15160 | 30.042 | 476 | 310 | 7 | 15 | 475 | 5 | 472 | 1.05e-60 | 207 |
MS.gene83904.t1 | AT2G04050 | 30.802 | 474 | 313 | 7 | 9 | 475 | 3 | 468 | 2.48e-60 | 206 |
MS.gene83904.t1 | AT1G15150 | 30.042 | 476 | 310 | 8 | 17 | 475 | 3 | 472 | 5.30e-60 | 205 |
MS.gene83904.t1 | AT1G15170 | 28.931 | 477 | 317 | 6 | 17 | 475 | 3 | 475 | 7.69e-57 | 196 |
MS.gene83904.t1 | AT2G04100 | 29.106 | 481 | 325 | 6 | 1 | 475 | 1 | 471 | 4.83e-56 | 194 |
MS.gene83904.t1 | AT2G04090 | 28.866 | 485 | 321 | 7 | 1 | 475 | 1 | 471 | 7.44e-55 | 191 |
MS.gene83904.t1 | AT2G04100 | 29.560 | 477 | 318 | 7 | 1 | 470 | 1 | 466 | 9.12e-55 | 191 |
MS.gene83904.t1 | AT1G15180 | 30.045 | 446 | 303 | 5 | 35 | 475 | 35 | 476 | 1.82e-49 | 177 |
MS.gene83904.t1 | AT1G15150 | 30.618 | 356 | 242 | 2 | 125 | 475 | 1 | 356 | 3.28e-48 | 171 |
MS.gene83904.t1 | AT1G15170 | 30.056 | 356 | 244 | 2 | 125 | 475 | 1 | 356 | 3.08e-47 | 167 |
MS.gene83904.t1 | AT1G66760 | 32.143 | 336 | 222 | 3 | 137 | 468 | 1 | 334 | 2.30e-46 | 165 |
MS.gene83904.t1 | AT1G58340 | 25.684 | 475 | 335 | 6 | 14 | 473 | 26 | 497 | 3.84e-45 | 166 |
MS.gene83904.t1 | AT2G38510 | 23.261 | 460 | 349 | 3 | 31 | 487 | 2 | 460 | 1.90e-43 | 160 |
MS.gene83904.t1 | AT1G66760 | 28.831 | 385 | 267 | 4 | 19 | 399 | 12 | 393 | 1.05e-41 | 154 |
MS.gene83904.t1 | AT3G23560 | 31.538 | 390 | 254 | 6 | 19 | 399 | 19 | 404 | 2.17e-40 | 150 |
MS.gene83904.t1 | AT1G71870 | 24.793 | 484 | 327 | 10 | 12 | 467 | 1 | 475 | 2.40e-38 | 147 |
MS.gene83904.t1 | AT4G23030 | 25.462 | 487 | 351 | 3 | 14 | 494 | 11 | 491 | 3.63e-37 | 143 |
MS.gene83904.t1 | AT5G19700 | 24.719 | 445 | 326 | 3 | 34 | 473 | 35 | 475 | 1.69e-32 | 130 |
MS.gene83904.t1 | AT5G52050 | 24.074 | 486 | 342 | 7 | 1 | 472 | 7 | 479 | 2.27e-32 | 130 |
MS.gene83904.t1 | AT4G29140 | 23.992 | 471 | 345 | 5 | 9 | 472 | 30 | 494 | 2.55e-31 | 127 |
MS.gene83904.t1 | AT4G22790 | 24.899 | 494 | 340 | 12 | 15 | 490 | 6 | 486 | 2.12e-29 | 121 |
MS.gene83904.t1 | AT5G49130 | 23.779 | 471 | 342 | 4 | 23 | 477 | 14 | 483 | 1.85e-27 | 115 |
MS.gene83904.t1 | AT2G04066 | 39.200 | 125 | 75 | 1 | 352 | 475 | 39 | 163 | 5.96e-25 | 101 |
MS.gene83904.t1 | AT1G15180 | 28.214 | 280 | 196 | 3 | 125 | 399 | 1 | 280 | 1.29e-21 | 97.4 |
Find 90 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCCACTGCCATTTGATTCT+TGG | 0.132786 | 6.1:+8971070 | None:intergenic |
CATCATTACTATTAGGATTA+TGG | 0.200141 | 6.1:-8979841 | MS.gene83904:CDS |
AAAATGAGTTGACCTATATT+TGG | 0.227999 | 6.1:+8979815 | None:intergenic |
GGGAAGAATCACTAAGAAAA+AGG | 0.239062 | 6.1:-8982632 | MS.gene83904:CDS |
ATAGGTTGCTATTACCTAAT+TGG | 0.243444 | 6.1:-8971505 | MS.gene83904:CDS |
GCATTAACATCATTACTATT+AGG | 0.253345 | 6.1:-8979848 | MS.gene83904:CDS |
TAAATTTAGAACACTATTCT+TGG | 0.267892 | 6.1:+8971031 | None:intergenic |
TTCACAAGATTTACATCATT+TGG | 0.278312 | 6.1:-8982561 | MS.gene83904:CDS |
ACTCCCAACCACTGATATTT+AGG | 0.285750 | 6.1:+8972954 | None:intergenic |
TGTCCAAATGTCTCTAAAAT+TGG | 0.289164 | 6.1:+8980079 | None:intergenic |
ACCATATGGACAGAGAATTA+AGG | 0.291262 | 6.1:+8979220 | None:intergenic |
ATTTGGATTGGGATGTTGTT+TGG | 0.312298 | 6.1:-8971330 | MS.gene83904:CDS |
ACAATTTCACTTTGGTCAAT+AGG | 0.314414 | 6.1:-8980028 | MS.gene83904:CDS |
CAGATTTGTAACTGGCATAT+TGG | 0.329863 | 6.1:-8982451 | MS.gene83904:intron |
CTTTGTCTTCTTATTCTTGA+AGG | 0.332923 | 6.1:-8972320 | MS.gene83904:CDS |
GGGAAGAAAGCAAGAAGATT+TGG | 0.349044 | 6.1:-8982605 | MS.gene83904:CDS |
TTGACTGTTAAGTATGAGTT+TGG | 0.356463 | 6.1:-8979881 | MS.gene83904:CDS |
GAGAAACCCTTCCAAGTATT+AGG | 0.358658 | 6.1:+8979776 | None:intergenic |
TCATCACTCTTAAAACTGAT+TGG | 0.362176 | 6.1:-8971278 | MS.gene83904:CDS |
CCCTTAATTCTCTGTCCATA+TGG | 0.364807 | 6.1:-8979221 | MS.gene83904:intron |
GTTCTAAGCAGATTTGTAAC+TGG | 0.373597 | 6.1:-8982459 | MS.gene83904:CDS |
CCATATGGACAGAGAATTAA+GGG | 0.376277 | 6.1:+8979221 | None:intergenic |
TAGCCCTAGCTCATCTTTCA+TGG | 0.385941 | 6.1:+8982704 | None:intergenic |
CCCAACAGAGAGTTAATAGA+TGG | 0.397346 | 6.1:-8971107 | MS.gene83904:CDS |
CTTGCTGCATATGCACTTGT+TGG | 0.400998 | 6.1:-8982486 | MS.gene83904:CDS |
GTAAAGCTCTCTGTCTCATC+TGG | 0.407908 | 6.1:-8979722 | MS.gene83904:CDS |
CTCCAACAGGAATACCAATT+AGG | 0.414071 | 6.1:+8971491 | None:intergenic |
AAGAAGATTTGGAGAGTAGC+AGG | 0.419985 | 6.1:-8982594 | MS.gene83904:CDS |
TTTGTGCTTGCAAGAATGTT+TGG | 0.431478 | 6.1:+8979972 | None:intergenic |
CTGTTGGAGCTGGGTGGCAA+AGG | 0.431855 | 6.1:-8971546 | MS.gene83904:CDS |
ATTTGATTCTTGGTTATCAA+TGG | 0.435119 | 6.1:+8971080 | None:intergenic |
TACCTAATTGGTATTCCTGT+TGG | 0.440291 | 6.1:-8971493 | MS.gene83904:CDS |
CATCACTCTTAAAACTGATT+GGG | 0.440673 | 6.1:-8971277 | MS.gene83904:CDS |
ACACCAATCACTACTCCAAC+AGG | 0.443963 | 6.1:+8971478 | None:intergenic |
GGATTATGGTTGCCAAATAT+AGG | 0.444719 | 6.1:-8979827 | MS.gene83904:CDS |
CCCATCTATTAACTCTCTGT+TGG | 0.444814 | 6.1:+8971106 | None:intergenic |
ACACTTTGTGGACAAGCATA+TGG | 0.446907 | 6.1:-8980202 | MS.gene83904:CDS |
GTAAATCTTGTGAATATTGC+AGG | 0.458474 | 6.1:+8982570 | None:intergenic |
GTTCGAGTGGCAAATGAACT+TGG | 0.458869 | 6.1:-8972421 | MS.gene83904:CDS |
CAGCCTAAATATCAGTGGTT+GGG | 0.461933 | 6.1:-8972957 | MS.gene83904:CDS |
CCATCTATTAACTCTCTGTT+GGG | 0.462771 | 6.1:+8971107 | None:intergenic |
GAGTGTATCTACAAAGATCT+TGG | 0.465546 | 6.1:-8980156 | MS.gene83904:CDS |
ATAGGAGTTTCTGTTGGAGC+TGG | 0.466570 | 6.1:-8971556 | MS.gene83904:intron |
ATTCCTGTTGGAGTAGTGAT+TGG | 0.466847 | 6.1:-8971481 | MS.gene83904:CDS |
GTTCTCACATCATTTGCCAT+TGG | 0.480553 | 6.1:-8972355 | MS.gene83904:CDS |
TCAAAAGCCAAGACAGCAAA+AGG | 0.481117 | 6.1:+8979900 | None:intergenic |
ATGAAAGATGAGCTAGGGCT+AGG | 0.483761 | 6.1:-8982702 | MS.gene83904:CDS |
AGTGTCCAACCTGTGCTCTC+AGG | 0.489803 | 6.1:-8972205 | MS.gene83904:intron |
TGAAAGATGAGCTAGGGCTA+GGG | 0.496349 | 6.1:-8982701 | MS.gene83904:CDS |
TGGGAGTTGATGATTGCCCT+AGG | 0.497705 | 6.1:-8972938 | MS.gene83904:CDS |
GGTGTTGTAAATATGTAAAG+AGG | 0.501872 | 6.1:+8980100 | None:intergenic |
CCAACAGCATCAGCCACATC+AGG | 0.502211 | 6.1:+8972268 | None:intergenic |
GCAGCCTAAATATCAGTGGT+TGG | 0.502805 | 6.1:-8972958 | MS.gene83904:intron |
GCAAAACAATACAACATGCT+TGG | 0.511054 | 6.1:-8980178 | MS.gene83904:CDS |
ATTGATAACCAAGAATCAAA+TGG | 0.514158 | 6.1:-8971078 | MS.gene83904:CDS |
CCTGATGTGGCTGATGCTGT+TGG | 0.525575 | 6.1:-8972268 | MS.gene83904:CDS |
TAAAACTGATTGGGACAAGC+AGG | 0.527120 | 6.1:-8971268 | MS.gene83904:intron |
TGGCAGGAACAATTTCACTT+TGG | 0.527422 | 6.1:-8980036 | MS.gene83904:CDS |
GAGACAGAGAGCTTTACAAC+AGG | 0.528390 | 6.1:+8979728 | None:intergenic |
TAGGAGTTTCTGTTGGAGCT+GGG | 0.535671 | 6.1:-8971555 | MS.gene83904:CDS |
AAAATGTCCTAATACTTGGA+AGG | 0.535880 | 6.1:-8979783 | MS.gene83904:CDS |
CTTAATTTGCAGTGTTCGAG+TGG | 0.537556 | 6.1:-8972434 | MS.gene83904:intron |
GCTTGGGATGGCAAGTGCAT+TGG | 0.539687 | 6.1:-8980227 | MS.gene83904:CDS |
AAATGTCCTAATACTTGGAA+GGG | 0.541755 | 6.1:-8979782 | MS.gene83904:CDS |
AACCAAGAATCAAATGGCAG+TGG | 0.543422 | 6.1:-8971072 | MS.gene83904:CDS |
TTATAAATAGGAGTTTCTGT+TGG | 0.550539 | 6.1:-8971562 | MS.gene83904:intron |
GGGAGTTGATGATTGCCCTA+GGG | 0.551605 | 6.1:-8972937 | MS.gene83904:CDS |
ATGGCCATGAAAGATGAGCT+AGG | 0.560110 | 6.1:-8982708 | None:intergenic |
GAGTGATGATAATAAGCACT+AGG | 0.561082 | 6.1:+8971292 | None:intergenic |
AGGGAGAAGTAAGATTGTTG+TGG | 0.561751 | 6.1:+8980120 | None:intergenic |
AGTGCATTGGAAACACTTTG+TGG | 0.570276 | 6.1:-8980214 | MS.gene83904:CDS |
ATTGTAGCATATGTAAACAT+AGG | 0.574302 | 6.1:-8971523 | MS.gene83904:CDS |
TTCTGATGAGACTGCTGAGA+GGG | 0.578336 | 6.1:-8982652 | MS.gene83904:CDS |
GTGTTGTAAATATGTAAAGA+GGG | 0.583176 | 6.1:+8980101 | None:intergenic |
ACTTGTAATGCAGCTTGGGA+TGG | 0.584959 | 6.1:-8980239 | MS.gene83904:intron |
GTGGCAAATGAACTTGGAAG+AGG | 0.587916 | 6.1:-8972415 | MS.gene83904:CDS |
TTTCACTACAAATCCTGATG+TGG | 0.592661 | 6.1:-8972281 | MS.gene83904:CDS |
GAAAGATGAGCTAGGGCTAG+GGG | 0.592686 | 6.1:-8982700 | MS.gene83904:CDS |
TGGCCATGAAAGATGAGCTA+GGG | 0.596243 | 6.1:-8982707 | None:intergenic |
TCTCATCTGGAGTCATGTTG+TGG | 0.599142 | 6.1:-8979709 | MS.gene83904:intron |
AGAGATTAATTACCTTGACA+TGG | 0.603664 | 6.1:+8971443 | None:intergenic |
AGTGATGATAATAAGCACTA+GGG | 0.606878 | 6.1:+8971293 | None:intergenic |
AGAGTACTACCTGAGAGCAC+AGG | 0.618575 | 6.1:+8972196 | None:intergenic |
CCAACAGAGAGTTAATAGAT+GGG | 0.620225 | 6.1:-8971106 | MS.gene83904:CDS |
AGAAGATTTGGAGAGTAGCA+GGG | 0.637145 | 6.1:-8982593 | MS.gene83904:CDS |
AAGTATGAGTTTGGACTCAG+TGG | 0.644032 | 6.1:-8979872 | MS.gene83904:CDS |
TACTACCTGAGAGCACAGGT+TGG | 0.657310 | 6.1:+8972200 | None:intergenic |
GAGTTTCTGTTGGAGCTGGG+TGG | 0.659899 | 6.1:-8971552 | MS.gene83904:CDS |
TGGCAACATGAAAGATGCTG+AGG | 0.692911 | 6.1:-8979247 | MS.gene83904:CDS |
ATTCTGATGAGACTGCTGAG+AGG | 0.706695 | 6.1:-8982653 | MS.gene83904:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.1 | gene | 8971044 | 8982724 | 8971044 | ID=MS.gene83904 |
chr6.1 | mRNA | 8971044 | 8982724 | 8971044 | ID=MS.gene83904.t1;Parent=MS.gene83904 |
chr6.1 | exon | 8982452 | 8982724 | 8982452 | ID=MS.gene83904.t1.exon1;Parent=MS.gene83904.t1 |
chr6.1 | CDS | 8982452 | 8982724 | 8982452 | ID=cds.MS.gene83904.t1;Parent=MS.gene83904.t1 |
chr6.1 | exon | 8979710 | 8980248 | 8979710 | ID=MS.gene83904.t1.exon2;Parent=MS.gene83904.t1 |
chr6.1 | CDS | 8979710 | 8980248 | 8979710 | ID=cds.MS.gene83904.t1;Parent=MS.gene83904.t1 |
chr6.1 | exon | 8979222 | 8979308 | 8979222 | ID=MS.gene83904.t1.exon3;Parent=MS.gene83904.t1 |
chr6.1 | CDS | 8979222 | 8979308 | 8979222 | ID=cds.MS.gene83904.t1;Parent=MS.gene83904.t1 |
chr6.1 | exon | 8972920 | 8972976 | 8972920 | ID=MS.gene83904.t1.exon4;Parent=MS.gene83904.t1 |
chr6.1 | CDS | 8972920 | 8972976 | 8972920 | ID=cds.MS.gene83904.t1;Parent=MS.gene83904.t1 |
chr6.1 | exon | 8972206 | 8972444 | 8972206 | ID=MS.gene83904.t1.exon5;Parent=MS.gene83904.t1 |
chr6.1 | CDS | 8972206 | 8972444 | 8972206 | ID=cds.MS.gene83904.t1;Parent=MS.gene83904.t1 |
chr6.1 | exon | 8971456 | 8971574 | 8971456 | ID=MS.gene83904.t1.exon6;Parent=MS.gene83904.t1 |
chr6.1 | CDS | 8971456 | 8971574 | 8971456 | ID=cds.MS.gene83904.t1;Parent=MS.gene83904.t1 |
chr6.1 | exon | 8971269 | 8971355 | 8971269 | ID=MS.gene83904.t1.exon7;Parent=MS.gene83904.t1 |
chr6.1 | CDS | 8971269 | 8971355 | 8971269 | ID=cds.MS.gene83904.t1;Parent=MS.gene83904.t1 |
chr6.1 | exon | 8971044 | 8971139 | 8971044 | ID=MS.gene83904.t1.exon8;Parent=MS.gene83904.t1 |
chr6.1 | CDS | 8971044 | 8971139 | 8971044 | ID=cds.MS.gene83904.t1;Parent=MS.gene83904.t1 |
Gene Sequence |
Protein sequence |