Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014110.t1 | XP_003625145.2 | 94.3 | 983 | 56 | 0 | 1 | 983 | 1 | 983 | 0.00E+00 | 1732.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014110.t1 | O81644 | 69.2 | 986 | 287 | 7 | 4 | 983 | 2 | 976 | 0.0e+00 | 1318.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014110.t1 | G7KTI5 | 94.3 | 983 | 56 | 0 | 1 | 983 | 1 | 983 | 0.0e+00 | 1732.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene49850 | MS.gene014110 | PPI |
| MS.gene055991 | MS.gene014110 | PPI |
| MS.gene37081 | MS.gene014110 | PPI |
| MS.gene014110 | MS.gene053110 | PPI |
| MS.gene037502 | MS.gene014110 | PPI |
| MS.gene057838 | MS.gene014110 | PPI |
| MS.gene31154 | MS.gene014110 | PPI |
| MS.gene014110 | MS.gene37274 | PPI |
| MS.gene014110 | MS.gene70072 | PPI |
| MS.gene70078 | MS.gene014110 | PPI |
| MS.gene052120 | MS.gene014110 | PPI |
| MS.gene45493 | MS.gene014110 | PPI |
| MS.gene014110 | MS.gene70077 | PPI |
| MS.gene30959 | MS.gene014110 | PPI |
| MS.gene057833 | MS.gene014110 | PPI |
| MS.gene057841 | MS.gene014110 | PPI |
| MS.gene014110 | MS.gene04628 | PPI |
| MS.gene45491 | MS.gene014110 | PPI |
| MS.gene82765 | MS.gene014110 | PPI |
| MS.gene032698 | MS.gene014110 | PPI |
| MS.gene014110 | MS.gene52664 | PPI |
| MS.gene034501 | MS.gene014110 | PPI |
| MS.gene017992 | MS.gene014110 | PPI |
| MS.gene014110 | MS.gene000108 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014110.t1 | MTR_7g091460 | 97.660 | 983 | 23 | 0 | 1 | 983 | 1 | 983 | 0.0 | 1987 |
| MS.gene014110.t1 | MTR_4g127660 | 46.540 | 997 | 482 | 14 | 1 | 983 | 1 | 960 | 0.0 | 890 |
| MS.gene014110.t1 | MTR_2g036860 | 45.875 | 994 | 495 | 12 | 1 | 983 | 1 | 962 | 0.0 | 867 |
| MS.gene014110.t1 | MTR_3g463530 | 38.985 | 985 | 498 | 18 | 1 | 983 | 1 | 884 | 0.0 | 673 |
| MS.gene014110.t1 | MTR_3g463530 | 42.447 | 801 | 433 | 11 | 1 | 787 | 1 | 787 | 0.0 | 641 |
| MS.gene014110.t1 | MTR_3g463530 | 43.562 | 730 | 400 | 8 | 1 | 728 | 1 | 720 | 0.0 | 622 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014110.t1 | AT2G41740 | 71.457 | 988 | 261 | 11 | 4 | 983 | 2 | 976 | 0.0 | 1408 |
| MS.gene014110.t1 | AT2G41740 | 71.457 | 988 | 261 | 11 | 4 | 983 | 2 | 976 | 0.0 | 1408 |
| MS.gene014110.t1 | AT3G57410 | 71.878 | 985 | 255 | 8 | 1 | 983 | 1 | 965 | 0.0 | 1375 |
| MS.gene014110.t1 | AT3G57410 | 71.878 | 985 | 255 | 8 | 1 | 983 | 1 | 965 | 0.0 | 1375 |
| MS.gene014110.t1 | AT3G57410 | 71.878 | 985 | 255 | 8 | 1 | 983 | 1 | 965 | 0.0 | 1375 |
| MS.gene014110.t1 | AT3G57410 | 71.878 | 985 | 255 | 8 | 1 | 983 | 1 | 965 | 0.0 | 1375 |
| MS.gene014110.t1 | AT3G57410 | 71.878 | 985 | 255 | 8 | 1 | 983 | 1 | 965 | 0.0 | 1375 |
| MS.gene014110.t1 | AT3G57410 | 71.878 | 985 | 255 | 8 | 1 | 983 | 1 | 965 | 0.0 | 1375 |
| MS.gene014110.t1 | AT3G57410 | 71.878 | 985 | 255 | 8 | 1 | 983 | 1 | 965 | 0.0 | 1375 |
| MS.gene014110.t1 | AT3G57410 | 71.878 | 985 | 255 | 8 | 1 | 983 | 1 | 965 | 0.0 | 1375 |
| MS.gene014110.t1 | AT3G57410 | 77.226 | 786 | 175 | 3 | 1 | 786 | 1 | 782 | 0.0 | 1271 |
| MS.gene014110.t1 | AT3G57410 | 78.680 | 727 | 153 | 2 | 1 | 727 | 1 | 725 | 0.0 | 1219 |
| MS.gene014110.t1 | AT4G30160 | 46.959 | 1003 | 483 | 12 | 1 | 983 | 1 | 974 | 0.0 | 884 |
| MS.gene014110.t1 | AT4G30160 | 46.959 | 1003 | 483 | 12 | 1 | 983 | 1 | 974 | 0.0 | 884 |
| MS.gene014110.t1 | AT4G30160 | 46.959 | 1003 | 483 | 12 | 1 | 983 | 1 | 974 | 0.0 | 884 |
| MS.gene014110.t1 | AT4G30160 | 46.686 | 1011 | 483 | 13 | 1 | 983 | 1 | 983 | 0.0 | 878 |
| MS.gene014110.t1 | AT5G57320 | 45.291 | 998 | 495 | 14 | 1 | 983 | 1 | 962 | 0.0 | 868 |
| MS.gene014110.t1 | AT5G57320 | 45.291 | 998 | 495 | 14 | 1 | 983 | 1 | 962 | 0.0 | 868 |
| MS.gene014110.t1 | AT2G29890 | 38.090 | 995 | 542 | 15 | 1 | 983 | 1 | 933 | 0.0 | 647 |
| MS.gene014110.t1 | AT2G29890 | 37.827 | 994 | 522 | 15 | 1 | 983 | 1 | 909 | 0.0 | 642 |
| MS.gene014110.t1 | AT2G29890 | 37.827 | 994 | 522 | 15 | 1 | 983 | 1 | 909 | 0.0 | 642 |
| MS.gene014110.t1 | AT2G29890 | 37.789 | 995 | 523 | 15 | 1 | 983 | 1 | 911 | 0.0 | 641 |
| MS.gene014110.t1 | AT2G29890 | 37.525 | 994 | 508 | 17 | 1 | 983 | 1 | 892 | 0.0 | 624 |
Find 218 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCGCTCTTATTCGAATTTC+TGG | 0.068339 | 7.2:+17454049 | MS.gene014110:CDS |
| GAACAGAAACCTCAACTTTC+TGG | 0.147823 | 7.2:+17454601 | MS.gene014110:CDS |
| AGTCAGATTCAGGTGAATTT+TGG | 0.156599 | 7.2:+17448950 | MS.gene014110:CDS |
| TGAATTGAATGCATTATTTA+AGG | 0.185769 | 7.2:-17456918 | None:intergenic |
| GAACAACAAATGCTATTTAT+TGG | 0.194603 | 7.2:+17452392 | MS.gene014110:CDS |
| TTAAATCCAACTTTGATTCT+TGG | 0.208519 | 7.2:+17452649 | MS.gene014110:CDS |
| CCATTCCTGCTCAACTTTAC+AGG | 0.213990 | 7.2:+17449040 | MS.gene014110:CDS |
| TGAACTAAATGCAGAGTTTA+AGG | 0.223900 | 7.2:-17457458 | None:intergenic |
| CTTCACTTATGAGCAATTAA+AGG | 0.226743 | 7.2:+17457893 | MS.gene014110:CDS |
| CTTGTTATTCTTGTAGCTTT+TGG | 0.243424 | 7.2:-17452597 | None:intergenic |
| GTTTGAAACTCTTCTTCTTC+TGG | 0.273544 | 7.2:-17448468 | None:intergenic |
| GAATTTCCCATGATCAGATT+TGG | 0.275129 | 7.2:-17447828 | None:intergenic |
| CTTTGCAGCTGGAAAGTTAC+AGG | 0.277681 | 7.2:+17454833 | MS.gene014110:intron |
| CTTGGCTCTTTCCTGAATAT+TGG | 0.278320 | 7.2:-17448709 | None:intergenic |
| CTTTGCGATCCTTGACCTCT+TGG | 0.284835 | 7.2:-17457517 | None:intergenic |
| GGTGGAATTTCCTCATTAAC+TGG | 0.301844 | 7.2:-17452994 | None:intergenic |
| GAGCAATTAAAGGCTAAATC+TGG | 0.310091 | 7.2:+17457903 | MS.gene014110:CDS |
| TGGAGCCAATTCCAATATTC+AGG | 0.313397 | 7.2:+17448698 | MS.gene014110:CDS |
| GAAGAGCTTGTTTCTGAAAC+TGG | 0.315747 | 7.2:+17457798 | MS.gene014110:CDS |
| GCTTGAAGGAGGTGGAAAAT+TGG | 0.327549 | 7.2:+17453020 | MS.gene014110:CDS |
| TTCACTTTCTCATTAAATAA+AGG | 0.328967 | 7.2:+17454696 | MS.gene014110:CDS |
| CGCACGCAGAAGTGTTTGTT+TGG | 0.329116 | 7.2:+17455041 | MS.gene014110:CDS |
| ATTTGTTTGATATTCACTTC+TGG | 0.330252 | 7.2:+17448107 | MS.gene014110:CDS |
| TACTTCCTGTGCAGTTGGTT+TGG | 0.336173 | 7.2:+17453250 | MS.gene014110:CDS |
| TGGCCTACTCCTTGGAATGC+TGG | 0.347476 | 7.2:-17447559 | None:intergenic |
| AACTTTGATTCTTGGCCATC+AGG | 0.351495 | 7.2:+17452657 | MS.gene014110:CDS |
| AGGTATTTGTTTGGGTTGGC+CGG | 0.355268 | 7.2:+17452427 | MS.gene014110:CDS |
| TTGGATACTGAGTCAGATTC+AGG | 0.365875 | 7.2:+17448940 | MS.gene014110:CDS |
| TTTCAGGGTCGCATATTTGA+TGG | 0.366605 | 7.2:+17453602 | MS.gene014110:intron |
| CTTGCATTACTATTTGGAAT+TGG | 0.367203 | 7.2:+17455795 | MS.gene014110:CDS |
| TCTTTCCTGAATATTGGAAT+TGG | 0.369492 | 7.2:-17448703 | None:intergenic |
| AATTTCCCATGATCAGATTT+GGG | 0.369604 | 7.2:-17447827 | None:intergenic |
| CCAACATCCTCCTTAGGTAA+TGG | 0.380875 | 7.2:-17453160 | None:intergenic |
| TGGTGCTGAGGTATTTGTTT+GGG | 0.382531 | 7.2:+17452419 | MS.gene014110:CDS |
| AAAGCTTCTGCTCTTTGTCT+TGG | 0.386980 | 7.2:-17456890 | None:intergenic |
| TTTCAGGGTGGTGTGAGCTC+TGG | 0.392813 | 7.2:+17453968 | MS.gene014110:intron |
| GATAAGATTTATCAATTCAA+TGG | 0.394727 | 7.2:+17448678 | MS.gene014110:CDS |
| AGGTGTAACTGCTTTAGTTC+CGG | 0.397537 | 7.2:-17457485 | None:intergenic |
| TTTGATATTCACTTCTGGAT+TGG | 0.398441 | 7.2:+17448112 | MS.gene014110:CDS |
| GTGGTGCTGAGGTATTTGTT+TGG | 0.407608 | 7.2:+17452418 | MS.gene014110:CDS |
| TCAGGAAAGAGCCAAGGCTT+TGG | 0.414083 | 7.2:+17448716 | MS.gene014110:CDS |
| ACACACTGCAATACCTGAAC+AGG | 0.416762 | 7.2:-17453520 | None:intergenic |
| CCAACCGAGTAGCCATCTTT+TGG | 0.419540 | 7.2:-17453465 | None:intergenic |
| TGTTGCCCTCTTCCAACCTA+TGG | 0.420378 | 7.2:+17453643 | MS.gene014110:CDS |
| GAAATTCCACCTTTGCTTGA+AGG | 0.422960 | 7.2:+17453006 | MS.gene014110:CDS |
| AACAAGCTCTTCTGTCTCCT+TGG | 0.423334 | 7.2:-17457787 | None:intergenic |
| TTTGTAGAGGGACTGACATA+TGG | 0.424024 | 7.2:+17447774 | MS.gene014110:intron |
| TTAGAAGGCGGTGTTGCATC+TGG | 0.425639 | 7.2:+17448435 | MS.gene014110:CDS |
| GAAGGAAGAGGAAAAGTTGC+AGG | 0.426111 | 7.2:+17452705 | MS.gene014110:CDS |
| AGCATGTCTTGCTTCCATCT+TGG | 0.429395 | 7.2:-17458142 | None:intergenic |
| CCTTCTGTTACTTTATATAG+AGG | 0.429563 | 7.2:-17455253 | None:intergenic |
| GATGCAACACCGCCTTCTAA+TGG | 0.434338 | 7.2:-17448432 | None:intergenic |
| CCATGATCAGATTTGGGCAA+TGG | 0.434962 | 7.2:-17447821 | None:intergenic |
| TCTGTTGTGTATGTCTCATC+TGG | 0.435377 | 7.2:-17454022 | None:intergenic |
| AGATTCTTACATCATCTTGC+AGG | 0.435408 | 7.2:+17447859 | MS.gene014110:CDS |
| TGTGATAAAATGCAGGTTCA+AGG | 0.436765 | 7.2:+17455753 | MS.gene014110:intron |
| TCAACTTTCTGGTTTGCTGT+TGG | 0.437448 | 7.2:+17454612 | MS.gene014110:CDS |
| TTGAATTGATAAATCTTATC+CGG | 0.438476 | 7.2:-17448675 | None:intergenic |
| AAGACAAAGAGCAGAAGCTT+TGG | 0.439336 | 7.2:+17456892 | MS.gene014110:CDS |
| TTTGCTGAAGCAACAAGGTA+TGG | 0.441502 | 7.2:+17452945 | MS.gene014110:CDS |
| ACTTTCTGGTTTGCTGTTGG+AGG | 0.444373 | 7.2:+17454615 | MS.gene014110:CDS |
| ATTGAACTTGATGCAGCCCT+TGG | 0.445418 | 7.2:+17448330 | MS.gene014110:CDS |
| ACGAGTTGTCAGAATAAAAC+AGG | 0.445675 | 7.2:+17448515 | MS.gene014110:CDS |
| ACTTGTCAGATTCATGCCCT+TGG | 0.446430 | 7.2:-17448380 | None:intergenic |
| ATCAAGTTGCCATACCGGAC+TGG | 0.448608 | 7.2:-17456957 | None:intergenic |
| TACAATGTCCAACTCACTAA+AGG | 0.448756 | 7.2:+17453492 | MS.gene014110:CDS |
| TTCAGTGAAGACCGTGCAAA+AGG | 0.449952 | 7.2:-17448624 | None:intergenic |
| CCATGTATTATACCATTAGA+AGG | 0.450482 | 7.2:+17448420 | MS.gene014110:CDS |
| CCACCTTTGCTTGAAGGAGG+TGG | 0.452140 | 7.2:+17453012 | MS.gene014110:CDS |
| ACAATGTCCAACTCACTAAA+GGG | 0.455808 | 7.2:+17453493 | MS.gene014110:CDS |
| AGCATACTTTAAAGCAACTC+CGG | 0.457705 | 7.2:-17454571 | None:intergenic |
| GCAGAAGTGTTTGTTTGGAT+TGG | 0.458213 | 7.2:+17455046 | MS.gene014110:CDS |
| AAAGTGCTACCTTCCACAAC+AGG | 0.459870 | 7.2:-17457628 | None:intergenic |
| GTTGTGGAAGGTAGCACTTT+CGG | 0.460585 | 7.2:+17457631 | MS.gene014110:CDS |
| GGGGACGTGCAGTGCAGTGG+AGG | 0.462141 | 7.2:+17448352 | MS.gene014110:CDS |
| TTGAACTTGATGCAGCCCTT+GGG | 0.463834 | 7.2:+17448331 | MS.gene014110:CDS |
| CTTTGCAGATGATGGAAAGT+TGG | 0.468033 | 7.2:+17448921 | MS.gene014110:intron |
| TGCAAGCTGCTGCTGCTCAA+TGG | 0.471105 | 7.2:-17454293 | None:intergenic |
| ACTAAAGGGTAGACCTGTTC+AGG | 0.472162 | 7.2:+17453507 | MS.gene014110:CDS |
| CCATTGCCCAAATCTGATCA+TGG | 0.473077 | 7.2:+17447821 | MS.gene014110:CDS |
| TCAAGTTGCCATACCGGACT+GGG | 0.474189 | 7.2:-17456956 | None:intergenic |
| ACATGCAATGTTGCAATTGT+TGG | 0.474745 | 7.2:+17448777 | MS.gene014110:CDS |
| GAGAAGGCTGGATCTCTAGA+TGG | 0.475834 | 7.2:+17455214 | MS.gene014110:CDS |
| ACCGGACTGGGAGATGCCTC+AGG | 0.479838 | 7.2:-17456944 | None:intergenic |
| GCTGCTGCTCAATGGAAGAT+TGG | 0.480547 | 7.2:-17454285 | None:intergenic |
| TCAGATTTGGGCAATGGAAC+TGG | 0.482282 | 7.2:-17447815 | None:intergenic |
| TTTCAGGTATGGATAATCAA+TGG | 0.484318 | 7.2:+17453124 | MS.gene014110:intron |
| AGTTGAGCAGGAATGGTCTC+TGG | 0.485473 | 7.2:-17449033 | None:intergenic |
| GCTTTAAAGTATGCTAAAGA+AGG | 0.485635 | 7.2:+17454579 | MS.gene014110:CDS |
| CCTTCTAATGGTATAATACA+TGG | 0.486449 | 7.2:-17448420 | None:intergenic |
| AGAATAACAAGGGTTATTCA+AGG | 0.492834 | 7.2:+17452609 | MS.gene014110:CDS |
| TCCTGAGGCATCTCCCAGTC+CGG | 0.493218 | 7.2:+17456943 | MS.gene014110:CDS |
| GGAAGTTATTCAGTTGTTGA+AGG | 0.493525 | 7.2:+17448737 | MS.gene014110:CDS |
| TCAAGGAGGACACAGGCAAA+GGG | 0.495288 | 7.2:+17457420 | MS.gene014110:CDS |
| CCTGTAAAGTTGAGCAGGAA+TGG | 0.497634 | 7.2:-17449040 | None:intergenic |
| GTTTCTGAAACTGGCAGCAA+TGG | 0.497751 | 7.2:+17457807 | MS.gene014110:CDS |
| CTGAATAACTTCCAAAGCCT+TGG | 0.506351 | 7.2:-17448727 | None:intergenic |
| GCTGAGGTATTTGTTTGGGT+TGG | 0.506878 | 7.2:+17452423 | MS.gene014110:CDS |
| ACATACCTGTAAAGTTGAGC+AGG | 0.510006 | 7.2:-17449045 | None:intergenic |
| TCTGCATTTAGTTCATCATC+CGG | 0.512169 | 7.2:+17457466 | MS.gene014110:CDS |
| TTTGAAAGTTCACCTTCCAC+TGG | 0.514664 | 7.2:-17452357 | None:intergenic |
| CCATTACCTAAGGAGGATGT+TGG | 0.514716 | 7.2:+17453160 | MS.gene014110:CDS |
| CAGAAATACATAGAGAAGGC+TGG | 0.518835 | 7.2:+17455202 | MS.gene014110:intron |
| GTCTAGCGCTACAAAAGTGT+TGG | 0.518917 | 7.2:+17447534 | MS.gene014110:CDS |
| AGACATGCTGAAAAGAAAAG+TGG | 0.519596 | 7.2:+17458156 | MS.gene014110:CDS |
| TTGAAGGAAAAGTATCATCA+AGG | 0.523102 | 7.2:+17448753 | MS.gene014110:CDS |
| CCACCTCCTTCAAGCAAAGG+TGG | 0.523532 | 7.2:-17453012 | None:intergenic |
| CTGCGTGCGTATCAAGTATG+AGG | 0.524059 | 7.2:-17455027 | None:intergenic |
| ATGAGAAAGTGAACAAATGC+GGG | 0.524703 | 7.2:-17454686 | None:intergenic |
| TGAACTTTCAAAGTCACTGT+TGG | 0.526540 | 7.2:+17452368 | MS.gene014110:CDS |
| GGTATTTGTTTGGGTTGGCC+GGG | 0.528418 | 7.2:+17452428 | MS.gene014110:CDS |
| GATTGGAAAGGATACAAGTC+AGG | 0.530039 | 7.2:+17448129 | MS.gene014110:CDS |
| AATACTGCTGGTGCTGAAGA+AGG | 0.531857 | 7.2:+17452687 | MS.gene014110:CDS |
| TCAGGATCTGCTAATACTGC+TGG | 0.532785 | 7.2:+17452675 | MS.gene014110:CDS |
| CCAACCTATGGTGGTCCTCA+AGG | 0.536576 | 7.2:+17453655 | MS.gene014110:CDS |
| AGCAATTAAAGGCTAAATCT+GGG | 0.538067 | 7.2:+17457904 | MS.gene014110:CDS |
| CTTGCCACAGGAGAATTGTC+AGG | 0.538106 | 7.2:-17457598 | None:intergenic |
| TGCCCTCTTCCAACCTATGG+TGG | 0.541469 | 7.2:+17453646 | MS.gene014110:CDS |
| AAATCTGGGAGTGATCTCTC+TGG | 0.541940 | 7.2:+17457918 | MS.gene014110:CDS |
| CCAAAAGATGGCTACTCGGT+TGG | 0.544351 | 7.2:+17453465 | MS.gene014110:CDS |
| TCACGACCTTCTGATTCAGA+AGG | 0.545777 | 7.2:-17457750 | None:intergenic |
| CCTCTATATAAAGTAACAGA+AGG | 0.545897 | 7.2:+17455253 | MS.gene014110:CDS |
| TTGCAGACAACACAAGGAAA+AGG | 0.546196 | 7.2:+17448076 | MS.gene014110:intron |
| AAGACTACTTCCTGTGCAGT+TGG | 0.546663 | 7.2:+17453245 | MS.gene014110:CDS |
| TTTCCACCTCCTTCAAGCAA+AGG | 0.547299 | 7.2:-17453015 | None:intergenic |
| TGATGGCCAAGAATCAAAGT+TGG | 0.548548 | 7.2:-17452655 | None:intergenic |
| CTGGAGTTGATCTTAAACGC+AGG | 0.549231 | 7.2:+17457937 | MS.gene014110:CDS |
| AGGTCTACCCTTTAGTGAGT+TGG | 0.552195 | 7.2:-17453500 | None:intergenic |
| GCAACAAGGTATGGGTGTCA+AGG | 0.552463 | 7.2:+17452954 | MS.gene014110:CDS |
| TTTCATCAACTTGTGTTACC+CGG | 0.554786 | 7.2:-17452446 | None:intergenic |
| TGGAAGAGGGCAACAAATTG+TGG | 0.558563 | 7.2:-17453635 | None:intergenic |
| AGAATCAAAACAAGAAAATG+TGG | 0.560052 | 7.2:+17457836 | MS.gene014110:CDS |
| TTTCATTTGCAGACAACACA+AGG | 0.560756 | 7.2:+17448070 | MS.gene014110:intron |
| AAATTGAATAACTTAAATCA+AGG | 0.562509 | 7.2:+17457403 | MS.gene014110:CDS |
| TTGCTGAAGCAACAAGGTAT+GGG | 0.563710 | 7.2:+17452946 | MS.gene014110:CDS |
| TGCGAAAACTCCATTACCTA+AGG | 0.564251 | 7.2:+17453150 | MS.gene014110:CDS |
| TTTATTGGACTGTGGTGCTG+AGG | 0.564316 | 7.2:+17452407 | MS.gene014110:CDS |
| AGGTATGGGTGTCAAGGGAG+CGG | 0.567174 | 7.2:+17452960 | MS.gene014110:CDS |
| ATCAAGGAGGACACAGGCAA+AGG | 0.567992 | 7.2:+17457419 | MS.gene014110:CDS |
| TATTCACTTCTGGATTGGAA+AGG | 0.571615 | 7.2:+17448117 | MS.gene014110:CDS |
| TGATCATGGGAAATTCTACA+TGG | 0.571823 | 7.2:+17447835 | MS.gene014110:CDS |
| TGGAATTGGTCATTCTGTAG+AGG | 0.571981 | 7.2:+17455809 | MS.gene014110:CDS |
| GGGACGTGCAGTGCAGTGGA+GGG | 0.572315 | 7.2:+17448353 | MS.gene014110:CDS |
| TCAGTGAAGACCGTGCAAAA+GGG | 0.572433 | 7.2:-17448623 | None:intergenic |
| GGACCACCATAGGTTGGAAG+AGG | 0.572587 | 7.2:-17453649 | None:intergenic |
| AATCTAATGGATCAAGTCAA+GGG | 0.572606 | 7.2:+17456861 | MS.gene014110:CDS |
| CATTGCCCAAATCTGATCAT+GGG | 0.573845 | 7.2:+17447822 | MS.gene014110:CDS |
| CCTTGAGGACCACCATAGGT+TGG | 0.575827 | 7.2:-17453655 | None:intergenic |
| TGACCTCTTGGAGATCGCCT+AGG | 0.577044 | 7.2:-17457505 | None:intergenic |
| TGAACTTGATGCAGCCCTTG+GGG | 0.577671 | 7.2:+17448332 | MS.gene014110:CDS |
| TTATCACTCTGGTGAGAGGA+AGG | 0.577702 | 7.2:+17453222 | MS.gene014110:CDS |
| CAACAAGGTATGGGTGTCAA+GGG | 0.578969 | 7.2:+17452955 | MS.gene014110:CDS |
| GCATACTTTAAAGCAACTCC+GGG | 0.579334 | 7.2:-17454570 | None:intergenic |
| TGTTTGGATTGGTCAGTGTG+TGG | 0.580064 | 7.2:+17455057 | MS.gene014110:CDS |
| CAAAAGCTACAAGAATAACA+AGG | 0.580782 | 7.2:+17452598 | MS.gene014110:CDS |
| AAATCTAATGGATCAAGTCA+AGG | 0.583918 | 7.2:+17456860 | MS.gene014110:CDS |
| GCTGGTGCTGAAGAAGGAAG+AGG | 0.589109 | 7.2:+17452693 | MS.gene014110:CDS |
| AACAGCAAACCAGAAAGTTG+AGG | 0.591628 | 7.2:-17454610 | None:intergenic |
| AGCAGCATGTACCGCTGCTG+AGG | 0.594099 | 7.2:+17452473 | MS.gene014110:CDS |
| AGGCGATCTCCAAGAGGTCA+AGG | 0.594278 | 7.2:+17457508 | MS.gene014110:CDS |
| ATTCCACCTTTGCTTGAAGG+AGG | 0.596534 | 7.2:+17453009 | MS.gene014110:CDS |
| GGTGAGGTCAAGCCAGTGGA+AGG | 0.597320 | 7.2:+17452345 | MS.gene014110:CDS |
| CCAGCTTTGCTGAAGCAACA+AGG | 0.597935 | 7.2:+17452940 | MS.gene014110:intron |
| AGCAGTAGTCCTGTTGTGGA+AGG | 0.598519 | 7.2:+17457619 | MS.gene014110:CDS |
| ATCAAAACAAGAAAATGTGG+AGG | 0.598601 | 7.2:+17457839 | MS.gene014110:CDS |
| ACACGTTTGTATGTATGCAA+AGG | 0.604224 | 7.2:+17448489 | MS.gene014110:CDS |
| CAATATTCAGGAAAGAGCCA+AGG | 0.604597 | 7.2:+17448710 | MS.gene014110:CDS |
| CACTGGCTTGACCTCACCAT+CGG | 0.604932 | 7.2:-17452340 | None:intergenic |
| AGGACCAAAAGATGGCTACT+CGG | 0.605691 | 7.2:+17453461 | MS.gene014110:CDS |
| GTGTTGGAACCAGCATTCCA+AGG | 0.606804 | 7.2:+17447550 | MS.gene014110:CDS |
| CATTCACTAAGTTACCAAGA+TGG | 0.607475 | 7.2:+17458128 | MS.gene014110:CDS |
| GGGTAACACAAGTTGATGAA+AGG | 0.608211 | 7.2:+17452448 | MS.gene014110:CDS |
| ACAGGACTACTGCTTGCCAC+AGG | 0.609771 | 7.2:-17457610 | None:intergenic |
| GATACCTTGAGGACCACCAT+AGG | 0.610363 | 7.2:-17453659 | None:intergenic |
| GTGCAGTGGAGGGAAATCCA+AGG | 0.611979 | 7.2:+17448363 | MS.gene014110:CDS |
| AAACAAGAAAATGTGGAGGG+TGG | 0.612120 | 7.2:+17457843 | MS.gene014110:CDS |
| GGCAAGCAGTAGTCCTGTTG+TGG | 0.612963 | 7.2:+17457615 | MS.gene014110:CDS |
| CACGACCTTCTGATTCAGAA+GGG | 0.613814 | 7.2:-17457749 | None:intergenic |
| GTGTTGTACACTTATCACTC+TGG | 0.614335 | 7.2:+17453211 | MS.gene014110:CDS |
| ATCTAATGGATCAAGTCAAG+GGG | 0.614748 | 7.2:+17456862 | MS.gene014110:CDS |
| TGGAGTTGATCTTAAACGCA+GGG | 0.614819 | 7.2:+17457938 | MS.gene014110:CDS |
| TGAAGGAGGTGGAAAATTGG+AGG | 0.614980 | 7.2:+17453023 | MS.gene014110:CDS |
| TGGGAGCAAAACCGCCAAAG+AGG | 0.616675 | 7.2:-17448975 | None:intergenic |
| GCAGTATTAGCAGATCCTGA+TGG | 0.618214 | 7.2:-17452672 | None:intergenic |
| AGTAAGAACATTAGAAAGAG+CGG | 0.619492 | 7.2:-17457554 | None:intergenic |
| TGTATTCATCTTAGACACTC+CGG | 0.620927 | 7.2:+17448656 | MS.gene014110:CDS |
| AATGAGAAAGTGAACAAATG+CGG | 0.626137 | 7.2:-17454687 | None:intergenic |
| TGCATTCAATTCATCTCCTG+AGG | 0.627352 | 7.2:+17456928 | MS.gene014110:CDS |
| TGCAGTGGAGGGAAATCCAA+GGG | 0.629828 | 7.2:+17448364 | MS.gene014110:CDS |
| GAACTTGATGCAGCCCTTGG+GGG | 0.630157 | 7.2:+17448333 | MS.gene014110:CDS |
| CAGACAACACAAGGAAAAGG+AGG | 0.632253 | 7.2:+17448079 | MS.gene014110:intron |
| GAACCAGCATTCCAAGGAGT+AGG | 0.632356 | 7.2:+17447556 | MS.gene014110:CDS |
| TGAAGGAAAAGTATCATCAA+GGG | 0.632365 | 7.2:+17448754 | MS.gene014110:CDS |
| AGTGTCCCTTCTGAATCAGA+AGG | 0.636758 | 7.2:+17457744 | MS.gene014110:CDS |
| TCAAAACAAGAAAATGTGGA+GGG | 0.639352 | 7.2:+17457840 | MS.gene014110:CDS |
| ACTTAAATCAAGGAGGACAC+AGG | 0.640179 | 7.2:+17457413 | MS.gene014110:CDS |
| CTCTATATAAAGTAACAGAA+GGG | 0.641376 | 7.2:+17455254 | MS.gene014110:CDS |
| ACTTTATATAGAGGTACATG+AGG | 0.641936 | 7.2:-17455244 | None:intergenic |
| GTAGAGGGACTGACATATGG+AGG | 0.646473 | 7.2:+17447777 | MS.gene014110:intron |
| ACACTTATCACTCTGGTGAG+AGG | 0.648428 | 7.2:+17453218 | MS.gene014110:CDS |
| TGAAGAAGTTATCGAAACCA+AGG | 0.650399 | 7.2:+17457770 | MS.gene014110:CDS |
| GACCACCATAGGTTGGAAGA+GGG | 0.653871 | 7.2:-17453648 | None:intergenic |
| ATCACCTGACAATTCTCCTG+TGG | 0.658751 | 7.2:+17457594 | MS.gene014110:CDS |
| GAACTAAAGCAGTTACACCT+AGG | 0.659483 | 7.2:+17457488 | MS.gene014110:CDS |
| TTGCAGTATTGCCGATGGTG+AGG | 0.661224 | 7.2:+17452329 | MS.gene014110:intron |
| TTGAATAACTTAAATCAAGG+AGG | 0.661257 | 7.2:+17457406 | MS.gene014110:CDS |
| GAAAACTCCATTACCTAAGG+AGG | 0.665179 | 7.2:+17453153 | MS.gene014110:CDS |
| CGATGGTGAGGTCAAGCCAG+TGG | 0.665213 | 7.2:+17452341 | MS.gene014110:CDS |
| AAAAGCTACAAGAATAACAA+GGG | 0.670365 | 7.2:+17452599 | MS.gene014110:CDS |
| GATCATGGGAAATTCTACAT+GGG | 0.670819 | 7.2:+17447836 | MS.gene014110:CDS |
| AAATGCTATTTATTGGACTG+TGG | 0.679201 | 7.2:+17452399 | MS.gene014110:CDS |
| AGATTGCAGAAGAAAACACT+CGG | 0.695852 | 7.2:-17454233 | None:intergenic |
| TGTGGTTGCAGTATTGCCGA+TGG | 0.696141 | 7.2:+17452324 | MS.gene014110:intron |
| AGTTGATCTTAAACGCAGGG+AGG | 0.700383 | 7.2:+17457941 | MS.gene014110:CDS |
| ATATGGAATTACCTCAGCAG+CGG | 0.704014 | 7.2:-17452484 | None:intergenic |
| ACACCTAGGCGATCTCCAAG+AGG | 0.711189 | 7.2:+17457502 | MS.gene014110:CDS |
| TCTAATGGATCAAGTCAAGG+GGG | 0.716226 | 7.2:+17456863 | MS.gene014110:CDS |
| TGTATTATACCATTAGAAGG+CGG | 0.738033 | 7.2:+17448423 | MS.gene014110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 17447532 | 17458189 | 17447532 | ID=MS.gene014110 |
| chr7.2 | mRNA | 17447532 | 17458189 | 17447532 | ID=MS.gene014110.t1;Parent=MS.gene014110 |
| chr7.2 | exon | 17447532 | 17447587 | 17447532 | ID=MS.gene014110.t1.exon1;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17447532 | 17447587 | 17447532 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17447781 | 17447880 | 17447781 | ID=MS.gene014110.t1.exon2;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17447781 | 17447880 | 17447781 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17448082 | 17448150 | 17448082 | ID=MS.gene014110.t1.exon3;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17448082 | 17448150 | 17448082 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17448300 | 17448536 | 17448300 | ID=MS.gene014110.t1.exon4;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17448300 | 17448536 | 17448300 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17448621 | 17448798 | 17448621 | ID=MS.gene014110.t1.exon5;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17448621 | 17448798 | 17448621 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17448929 | 17449061 | 17448929 | ID=MS.gene014110.t1.exon6;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17448929 | 17449061 | 17448929 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17452335 | 17452494 | 17452335 | ID=MS.gene014110.t1.exon7;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17452335 | 17452494 | 17452335 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17452573 | 17452726 | 17452573 | ID=MS.gene014110.t1.exon8;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17452573 | 17452726 | 17452573 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17452944 | 17453044 | 17452944 | ID=MS.gene014110.t1.exon9;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17452944 | 17453044 | 17452944 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17453130 | 17453288 | 17453130 | ID=MS.gene014110.t1.exon10;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17453130 | 17453288 | 17453130 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17453460 | 17453528 | 17453460 | ID=MS.gene014110.t1.exon11;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17453460 | 17453528 | 17453460 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17453608 | 17453676 | 17453608 | ID=MS.gene014110.t1.exon12;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17453608 | 17453676 | 17453608 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17453974 | 17454111 | 17453974 | ID=MS.gene014110.t1.exon13;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17453974 | 17454111 | 17453974 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17454211 | 17454339 | 17454211 | ID=MS.gene014110.t1.exon14;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17454211 | 17454339 | 17454211 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17454570 | 17454717 | 17454570 | ID=MS.gene014110.t1.exon15;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17454570 | 17454717 | 17454570 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17454841 | 17454854 | 17454841 | ID=MS.gene014110.t1.exon16;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17454841 | 17454854 | 17454841 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17454977 | 17455117 | 17454977 | ID=MS.gene014110.t1.exon17;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17454977 | 17455117 | 17454977 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17455205 | 17455330 | 17455205 | ID=MS.gene014110.t1.exon18;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17455205 | 17455330 | 17455205 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17455768 | 17455830 | 17455768 | ID=MS.gene014110.t1.exon19;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17455768 | 17455830 | 17455768 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17456857 | 17456964 | 17456857 | ID=MS.gene014110.t1.exon20;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17456857 | 17456964 | 17456857 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17457400 | 17457652 | 17457400 | ID=MS.gene014110.t1.exon21;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17457400 | 17457652 | 17457400 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17457730 | 17457962 | 17457730 | ID=MS.gene014110.t1.exon22;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17457730 | 17457962 | 17457730 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| chr7.2 | exon | 17458076 | 17458189 | 17458076 | ID=MS.gene014110.t1.exon23;Parent=MS.gene014110.t1 |
| chr7.2 | CDS | 17458076 | 17458189 | 17458076 | ID=cds.MS.gene014110.t1;Parent=MS.gene014110.t1 |
| Gene Sequence |
| Protein sequence |
