Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034501.t1 | XP_013443410.1 | 99.7 | 377 | 1 | 0 | 1 | 377 | 1 | 377 | 1.40E-216 | 761.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034501.t1 | O81221 | 98.1 | 377 | 7 | 0 | 1 | 377 | 1 | 377 | 1.2e-216 | 753.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034501.t1 | B7FIH3 | 99.7 | 377 | 1 | 0 | 1 | 377 | 1 | 377 | 1.0e-216 | 761.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034501.t1 | MTR_0015s0130 | 99.735 | 377 | 1 | 0 | 1 | 377 | 1 | 377 | 0.0 | 782 |
| MS.gene034501.t1 | MTR_2g096840 | 98.408 | 377 | 6 | 0 | 1 | 377 | 1 | 377 | 0.0 | 775 |
| MS.gene034501.t1 | MTR_7g093260 | 97.082 | 377 | 11 | 0 | 1 | 377 | 1 | 377 | 0.0 | 770 |
| MS.gene034501.t1 | MTR_6g004000 | 97.347 | 377 | 10 | 0 | 1 | 377 | 1 | 377 | 0.0 | 769 |
| MS.gene034501.t1 | MTR_7g026230 | 97.347 | 377 | 10 | 0 | 1 | 377 | 1 | 377 | 0.0 | 766 |
| MS.gene034501.t1 | MTR_3g095530 | 95.491 | 377 | 17 | 0 | 1 | 377 | 1 | 377 | 0.0 | 761 |
| MS.gene034501.t1 | MTR_2g008050 | 93.634 | 377 | 24 | 0 | 1 | 377 | 1 | 377 | 0.0 | 749 |
| MS.gene034501.t1 | MTR_7g027185 | 43.272 | 379 | 201 | 3 | 10 | 374 | 7 | 385 | 7.16e-120 | 352 |
| MS.gene034501.t1 | MTR_7g027185 | 44.507 | 355 | 184 | 2 | 10 | 351 | 7 | 361 | 3.71e-117 | 345 |
| MS.gene034501.t1 | MTR_7g027185 | 47.557 | 307 | 159 | 1 | 10 | 314 | 7 | 313 | 1.75e-109 | 323 |
| MS.gene034501.t1 | MTR_5g066400 | 38.031 | 447 | 203 | 12 | 1 | 376 | 1 | 444 | 1.52e-93 | 287 |
| MS.gene034501.t1 | MTR_8g464900 | 37.269 | 432 | 198 | 11 | 1 | 362 | 1 | 429 | 8.47e-87 | 269 |
| MS.gene034501.t1 | MTR_5g066400 | 35.426 | 446 | 188 | 12 | 1 | 376 | 1 | 416 | 1.08e-80 | 253 |
| MS.gene034501.t1 | MTR_8g089630 | 34.550 | 411 | 219 | 8 | 10 | 372 | 10 | 418 | 1.17e-71 | 230 |
| MS.gene034501.t1 | MTR_5g066400 | 35.000 | 400 | 189 | 11 | 1 | 332 | 1 | 397 | 1.99e-69 | 224 |
| MS.gene034501.t1 | MTR_3g030550 | 37.766 | 376 | 208 | 9 | 11 | 377 | 5 | 363 | 4.62e-68 | 219 |
| MS.gene034501.t1 | MTR_2g445210 | 28.132 | 423 | 238 | 7 | 8 | 366 | 6 | 426 | 2.85e-55 | 188 |
| MS.gene034501.t1 | MTR_8g007440 | 34.470 | 264 | 146 | 6 | 77 | 319 | 9 | 266 | 2.91e-46 | 159 |
| MS.gene034501.t1 | MTR_2g445210 | 26.613 | 372 | 207 | 7 | 8 | 315 | 6 | 375 | 2.72e-41 | 149 |
| MS.gene034501.t1 | MTR_3g010170 | 30.640 | 297 | 182 | 9 | 91 | 371 | 179 | 467 | 5.10e-40 | 148 |
| MS.gene034501.t1 | MTR_8g070520 | 31.399 | 293 | 174 | 10 | 91 | 366 | 187 | 469 | 1.24e-35 | 136 |
| MS.gene034501.t1 | MTR_8g070520 | 30.935 | 278 | 166 | 9 | 91 | 352 | 187 | 454 | 2.23e-32 | 127 |
| MS.gene034501.t1 | MTR_3g067945 | 29.365 | 252 | 159 | 7 | 9 | 245 | 21 | 268 | 2.95e-22 | 99.0 |
| MS.gene034501.t1 | MTR_3g067945 | 33.607 | 122 | 78 | 2 | 250 | 368 | 586 | 707 | 2.13e-15 | 78.2 |
| MS.gene034501.t1 | MTR_8g008540 | 70.270 | 37 | 11 | 0 | 340 | 376 | 41 | 77 | 4.15e-13 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034501.t1 | AT3G53750 | 96.552 | 377 | 13 | 0 | 1 | 377 | 1 | 377 | 0.0 | 764 |
| MS.gene034501.t1 | AT3G53750 | 96.552 | 377 | 13 | 0 | 1 | 377 | 1 | 377 | 0.0 | 764 |
| MS.gene034501.t1 | AT2G37620 | 96.552 | 377 | 13 | 0 | 1 | 377 | 1 | 377 | 0.0 | 764 |
| MS.gene034501.t1 | AT2G37620 | 96.552 | 377 | 13 | 0 | 1 | 377 | 1 | 377 | 0.0 | 764 |
| MS.gene034501.t1 | AT2G37620 | 96.552 | 377 | 13 | 0 | 1 | 377 | 1 | 377 | 0.0 | 764 |
| MS.gene034501.t1 | AT2G37620 | 96.552 | 377 | 13 | 0 | 1 | 377 | 1 | 377 | 0.0 | 764 |
| MS.gene034501.t1 | AT3G46520 | 97.082 | 377 | 11 | 0 | 1 | 377 | 1 | 377 | 0.0 | 763 |
| MS.gene034501.t1 | AT3G46520 | 97.082 | 377 | 11 | 0 | 1 | 377 | 1 | 377 | 0.0 | 763 |
| MS.gene034501.t1 | AT5G09810 | 95.756 | 377 | 16 | 0 | 1 | 377 | 1 | 377 | 0.0 | 763 |
| MS.gene034501.t1 | AT3G12110 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| MS.gene034501.t1 | AT5G59370 | 96.817 | 377 | 12 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| MS.gene034501.t1 | AT5G59370 | 96.817 | 377 | 12 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| MS.gene034501.t1 | AT3G18780 | 92.838 | 377 | 27 | 0 | 1 | 377 | 1 | 377 | 0.0 | 746 |
| MS.gene034501.t1 | AT3G18780 | 92.838 | 377 | 27 | 0 | 1 | 377 | 1 | 377 | 0.0 | 746 |
| MS.gene034501.t1 | AT1G49240 | 92.573 | 377 | 28 | 0 | 1 | 377 | 1 | 377 | 0.0 | 744 |
| MS.gene034501.t1 | AT3G18780 | 92.758 | 359 | 26 | 0 | 1 | 359 | 1 | 359 | 0.0 | 705 |
| MS.gene034501.t1 | AT2G42100 | 84.783 | 368 | 56 | 0 | 10 | 377 | 11 | 378 | 0.0 | 676 |
| MS.gene034501.t1 | AT2G42090 | 70.541 | 370 | 104 | 1 | 7 | 376 | 1 | 365 | 0.0 | 566 |
| MS.gene034501.t1 | AT2G42170 | 78.012 | 332 | 70 | 1 | 46 | 377 | 1 | 329 | 0.0 | 558 |
| MS.gene034501.t1 | AT2G42170 | 78.012 | 332 | 70 | 1 | 46 | 377 | 1 | 329 | 0.0 | 558 |
| MS.gene034501.t1 | AT2G42170 | 77.885 | 312 | 66 | 1 | 46 | 357 | 1 | 309 | 0.0 | 521 |
| MS.gene034501.t1 | AT2G42170 | 77.885 | 312 | 66 | 1 | 46 | 357 | 1 | 309 | 0.0 | 521 |
| MS.gene034501.t1 | AT2G42170 | 78.319 | 226 | 46 | 1 | 152 | 377 | 9 | 231 | 1.42e-131 | 376 |
| MS.gene034501.t1 | AT3G27000 | 44.327 | 379 | 197 | 4 | 10 | 374 | 7 | 385 | 3.43e-122 | 358 |
| MS.gene034501.t1 | AT1G18450 | 37.246 | 443 | 208 | 9 | 1 | 376 | 1 | 440 | 2.68e-95 | 291 |
| MS.gene034501.t1 | AT1G13180 | 34.615 | 416 | 212 | 11 | 10 | 372 | 9 | 417 | 8.14e-72 | 231 |
| MS.gene034501.t1 | AT3G60830 | 37.731 | 379 | 212 | 9 | 7 | 377 | 1 | 363 | 1.85e-67 | 217 |
| MS.gene034501.t1 | AT3G33520 | 30.166 | 421 | 236 | 7 | 10 | 377 | 5 | 420 | 4.18e-58 | 195 |
| MS.gene034501.t1 | AT5G56180 | 31.690 | 284 | 169 | 9 | 91 | 358 | 50 | 324 | 2.54e-35 | 132 |
| MS.gene034501.t1 | AT5G56180 | 31.690 | 284 | 169 | 9 | 91 | 358 | 182 | 456 | 1.54e-34 | 133 |
| MS.gene034501.t1 | AT3G12380 | 29.572 | 257 | 158 | 6 | 9 | 245 | 21 | 274 | 3.17e-25 | 107 |
| MS.gene034501.t1 | AT3G12380 | 33.793 | 145 | 92 | 2 | 228 | 368 | 572 | 716 | 2.65e-16 | 81.3 |
| MS.gene034501.t1 | AT3G12380 | 29.412 | 255 | 155 | 6 | 9 | 245 | 21 | 268 | 1.53e-24 | 105 |
| MS.gene034501.t1 | AT3G12380 | 33.793 | 145 | 92 | 2 | 228 | 368 | 566 | 710 | 2.64e-16 | 81.3 |
| MS.gene034501.t1 | AT1G73910 | 35.862 | 145 | 74 | 3 | 1 | 129 | 1 | 142 | 2.24e-23 | 95.1 |
| MS.gene034501.t1 | AT1G73910 | 35.862 | 145 | 74 | 3 | 1 | 129 | 1 | 142 | 2.24e-23 | 95.1 |
| MS.gene034501.t1 | AT5G56180 | 32.673 | 202 | 113 | 8 | 91 | 281 | 182 | 371 | 1.27e-19 | 89.7 |
| MS.gene034501.t1 | AT1G73910 | 29.268 | 123 | 71 | 2 | 1 | 107 | 1 | 123 | 2.91e-12 | 64.7 |
Find 107 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCTCTTGTTTGTGATAA+TGG | 0.154159 | 1.1:-40746725 | MS.gene034501:CDS |
| ATAGGTATTGTTCTTGATTC+TGG | 0.193204 | 1.1:-40744912 | MS.gene034501:intron |
| CTGGATTGGAGGCTCCATTT+TGG | 0.220933 | 1.1:-40744340 | MS.gene034501:CDS |
| AGCATGGAATTGTTAGTAAC+TGG | 0.268065 | 1.1:-40745953 | MS.gene034501:CDS |
| TGTTAGTAACTGGGATGATA+TGG | 0.302766 | 1.1:-40745943 | MS.gene034501:CDS |
| GTGATGAAGCTCAATCAAAA+AGG | 0.325898 | 1.1:-40746004 | MS.gene034501:CDS |
| GTTCACAGGAAATGCTTCTA+AGG | 0.326765 | 1.1:-40743807 | None:intergenic |
| AGAAGAACTGGATGTTCTTC+AGG | 0.338859 | 1.1:+40745876 | None:intergenic |
| ACCAAGTAGCATGAAAATTA+AGG | 0.346175 | 1.1:-40744394 | MS.gene034501:CDS |
| AACAGCCGAGCTCGTCTTTG+AGG | 0.347903 | 1.1:+40744671 | None:intergenic |
| CTAACAATTCCATGCTCAAT+TGG | 0.355777 | 1.1:+40745960 | None:intergenic |
| TAATTGCAGGCTGGATTTGC+CGG | 0.363107 | 1.1:-40746122 | MS.gene034501:intron |
| TCCACACGCAATCCTGCGTT+TGG | 0.371608 | 1.1:-40744844 | MS.gene034501:CDS |
| CGTGGACGACCTACAATACT+AGG | 0.377152 | 1.1:+40746074 | None:intergenic |
| GGTGCTGAGGGAAGCCAAAA+TGG | 0.378341 | 1.1:+40744326 | None:intergenic |
| CACTGGTGTGATGGTTGGTA+TGG | 0.381213 | 1.1:-40746048 | MS.gene034501:CDS |
| CTTGTTTGTGATAATGGAAC+TGG | 0.393561 | 1.1:-40746719 | MS.gene034501:CDS |
| GATATTAGAAAGGATCTCTA+TGG | 0.393879 | 1.1:-40744495 | MS.gene034501:CDS |
| AGCTATGTATGTTGCCATTC+AGG | 0.402911 | 1.1:-40745778 | MS.gene034501:CDS |
| ATCCTGCGTTTGGATCTTGC+AGG | 0.408141 | 1.1:-40744834 | MS.gene034501:CDS |
| CGATTAGCCTTTGGATTAAG+TGG | 0.413728 | 1.1:+40745843 | None:intergenic |
| AGGAAGTATAGTGTCTGGAT+TGG | 0.419464 | 1.1:-40744354 | MS.gene034501:CDS |
| GATGGCTGGAAGAGTACTTC+AGG | 0.422610 | 1.1:+40744585 | None:intergenic |
| TGTTCCCCGGCATTGCTGAT+AGG | 0.428746 | 1.1:-40744443 | MS.gene034501:CDS |
| CGCCCTTGGTGCATCATCTC+CGG | 0.435198 | 1.1:+40746103 | None:intergenic |
| TATGCTAGTGGCCGTACAAC+CGG | 0.439242 | 1.1:-40745741 | MS.gene034501:intron |
| TAATGGAACTGGAATGGTTA+AGG | 0.441453 | 1.1:-40746708 | MS.gene034501:intron |
| TTCCCTCAGCACCTTCCAAC+AGG | 0.446388 | 1.1:-40744316 | MS.gene034501:intron |
| CTCTTCCAGCCATCCATGAT+TGG | 0.448268 | 1.1:-40744576 | MS.gene034501:CDS |
| ATACATAGCTGGAGCATTGA+AGG | 0.451630 | 1.1:+40745791 | None:intergenic |
| AAGTATAGTGTCTGGATTGG+AGG | 0.453134 | 1.1:-40744351 | MS.gene034501:CDS |
| AGGGCATATCCTTCATAGAT+AGG | 0.454246 | 1.1:+40744867 | None:intergenic |
| GATGGACAGGTGATCACAAT+AGG | 0.457168 | 1.1:-40744627 | MS.gene034501:CDS |
| AAGGCTGAATATGATGAATC+AGG | 0.458861 | 1.1:-40743840 | MS.gene034501:CDS |
| AAGCGAAAGCACGGCCTGAA+TGG | 0.462189 | 1.1:+40745764 | None:intergenic |
| ATTGTGATCACCTGTCCATC+AGG | 0.463240 | 1.1:+40744630 | None:intergenic |
| CTCATCCTATCAGCAATGCC+GGG | 0.468005 | 1.1:+40744438 | None:intergenic |
| GGTGCTTCAGTGAGAAGAAC+TGG | 0.478493 | 1.1:+40745864 | None:intergenic |
| CATTTCCTGTGAACAATTGA+AGG | 0.480733 | 1.1:+40743816 | None:intergenic |
| TTCATAATCAAGAGCTATGT+AGG | 0.480816 | 1.1:+40744707 | None:intergenic |
| TAACAATTCCATGCTCAATT+GGG | 0.481241 | 1.1:+40745961 | None:intergenic |
| ATTGTTCTTGATTCTGGAGA+TGG | 0.486571 | 1.1:-40744906 | MS.gene034501:CDS |
| GCGGTGTTCCCTAGTATTGT+AGG | 0.487449 | 1.1:-40746083 | MS.gene034501:CDS |
| CAGAGAGGAAGTATAGTGTC+TGG | 0.492085 | 1.1:-40744359 | MS.gene034501:CDS |
| AACGCAGGATTGCGTGTGGA+AGG | 0.498417 | 1.1:+40744847 | None:intergenic |
| CTATGAGTTACCTGATGGAC+AGG | 0.498962 | 1.1:-40744640 | MS.gene034501:CDS |
| AGGAGCTTCCATACCAATCA+TGG | 0.501773 | 1.1:+40744563 | None:intergenic |
| GGGATGATATGGAAAAGATC+TGG | 0.506672 | 1.1:-40745932 | MS.gene034501:CDS |
| AAGAATCTTTACCGGTTGTA+CGG | 0.508172 | 1.1:+40745730 | None:intergenic |
| GTGCTTTCGCTTTATGCTAG+TGG | 0.509701 | 1.1:-40745753 | MS.gene034501:CDS |
| GCTCATCCTATCAGCAATGC+CGG | 0.518030 | 1.1:+40744437 | None:intergenic |
| GATTTCACGCTCGGCTGTTG+TGG | 0.522000 | 1.1:+40744755 | None:intergenic |
| CAGACACTATACTTCCTCTC+TGG | 0.523127 | 1.1:+40744360 | None:intergenic |
| CACACAGTTCCTATCTATGA+AGG | 0.525553 | 1.1:-40744876 | MS.gene034501:CDS |
| CCATACCAATCATGGATGGC+TGG | 0.531059 | 1.1:+40744571 | None:intergenic |
| GTCTCTCACGATTTCACGCT+CGG | 0.537921 | 1.1:+40744746 | None:intergenic |
| CCAGCCATCCATGATTGGTA+TGG | 0.540901 | 1.1:-40744571 | MS.gene034501:CDS |
| TTCAGGACAACGGAAACGTT+CGG | 0.541873 | 1.1:+40744602 | None:intergenic |
| CAGGCCCTTCAATTGTTCAC+AGG | 0.542188 | 1.1:-40743821 | MS.gene034501:CDS |
| ATGAAAATCTTAACCGAGCG+TGG | 0.549893 | 1.1:-40744789 | MS.gene034501:CDS |
| ATACCTGTTGGAAGGTGCTG+AGG | 0.550602 | 1.1:+40744313 | None:intergenic |
| GATGGTTGGTATGGGACAAA+AGG | 0.552916 | 1.1:-40746039 | MS.gene034501:CDS |
| TGAATGGCAACATACATAGC+TGG | 0.554069 | 1.1:+40745780 | None:intergenic |
| ATACTAGGGAACACCGCCCT+TGG | 0.561168 | 1.1:+40746089 | None:intergenic |
| TATGTTGTTTCATGTATACC+AGG | 0.569084 | 1.1:+40744543 | None:intergenic |
| CTAAAGTACCCAATTGAGCA+TGG | 0.570119 | 1.1:-40745969 | MS.gene034501:CDS |
| AAGAGCTATGAGTTACCTGA+TGG | 0.572599 | 1.1:-40744645 | MS.gene034501:CDS |
| GTGTGATGTCGATATTAGAA+AGG | 0.572715 | 1.1:-40744505 | MS.gene034501:CDS |
| TCCACGCCACACTGGTGTGA+TGG | 0.574722 | 1.1:-40746057 | MS.gene034501:CDS |
| ATGATTGGTATGGAAGCTCC+TGG | 0.576789 | 1.1:-40744561 | MS.gene034501:CDS |
| AGAAACCTCAAAGACGAGCT+CGG | 0.577050 | 1.1:-40744676 | MS.gene034501:CDS |
| ACGCAGGATTGCGTGTGGAA+GGG | 0.581046 | 1.1:+40744848 | None:intergenic |
| CGCCACACTGGTGTGATGGT+TGG | 0.586183 | 1.1:-40746053 | MS.gene034501:CDS |
| GAGCAAGGAGATCACAGCAT+TGG | 0.587533 | 1.1:-40744418 | MS.gene034501:CDS |
| TACCTGTTGGAAGGTGCTGA+GGG | 0.587542 | 1.1:+40744314 | None:intergenic |
| TTGTGATAATGGAACTGGAA+TGG | 0.590034 | 1.1:-40746714 | MS.gene034501:CDS |
| ACCATCACACCAGTGTGGCG+TGG | 0.593745 | 1.1:+40746056 | None:intergenic |
| GTTCCATTATCACAAACAAG+AGG | 0.600317 | 1.1:+40746722 | None:intergenic |
| TGCCGGAGATGATGCACCAA+GGG | 0.600516 | 1.1:-40746105 | MS.gene034501:CDS |
| ACACTATACTTCCTCTCTGG+TGG | 0.604108 | 1.1:+40744363 | None:intergenic |
| ATTTCCTGTGAACAATTGAA+GGG | 0.604151 | 1.1:+40743817 | None:intergenic |
| ACTAGCATAAAGCGAAAGCA+CGG | 0.615597 | 1.1:+40745755 | None:intergenic |
| TATGGAAACATCGTATTGAG+TGG | 0.620418 | 1.1:-40744477 | MS.gene034501:CDS |
| GGTGGTACGACTATGTTCCC+CGG | 0.621683 | 1.1:-40744456 | MS.gene034501:CDS |
| GGACAAAAGGATGCATATGT+TGG | 0.623959 | 1.1:-40746026 | MS.gene034501:CDS |
| TGAAATCGTGAGAGACGTGA+AGG | 0.629620 | 1.1:-40744739 | MS.gene034501:CDS |
| CGGAGATGATGCACCAAGGG+CGG | 0.631181 | 1.1:-40746102 | MS.gene034501:CDS |
| GCATGGAATTGTTAGTAACT+GGG | 0.633326 | 1.1:-40745952 | MS.gene034501:CDS |
| CATGCACTATACCTGTTGGA+AGG | 0.635341 | 1.1:+40744305 | None:intergenic |
| GCTTCCATACCAATCATGGA+TGG | 0.638459 | 1.1:+40744567 | None:intergenic |
| TCCAAACGCAGGATTGCGTG+TGG | 0.640726 | 1.1:+40744843 | None:intergenic |
| ACTGGTGTGATGGTTGGTAT+GGG | 0.640914 | 1.1:-40746047 | MS.gene034501:CDS |
| GGTGAAAGAGTATCCACGCT+CGG | 0.643494 | 1.1:+40744776 | None:intergenic |
| TGAAGCACCACTTAATCCAA+AGG | 0.643775 | 1.1:-40745850 | MS.gene034501:CDS |
| CATTGCTGATAGGATGAGCA+AGG | 0.644331 | 1.1:-40744433 | MS.gene034501:CDS |
| AAGTAGCATGAAAATTAAGG+TGG | 0.656638 | 1.1:-40744391 | MS.gene034501:CDS |
| GTGGACGACCTACAATACTA+GGG | 0.661189 | 1.1:+40746075 | None:intergenic |
| TTGCCGGAGATGATGCACCA+AGG | 0.662970 | 1.1:-40746106 | MS.gene034501:CDS |
| GGAAACATCGTATTGAGTGG+TGG | 0.669837 | 1.1:-40744474 | MS.gene034501:CDS |
| AATGCAGATGTGGATTGCAA+AGG | 0.677558 | 1.1:-40743859 | MS.gene034501:intron |
| TCATCCTATCAGCAATGCCG+GGG | 0.683199 | 1.1:+40744439 | None:intergenic |
| GTAGGTCGTCCACGCCACAC+TGG | 0.686011 | 1.1:-40746065 | MS.gene034501:CDS |
| GACCTGCAAGATCCAAACGC+AGG | 0.690015 | 1.1:+40744832 | None:intergenic |
| GGAAGAGTACTTCAGGACAA+CGG | 0.707065 | 1.1:+40744592 | None:intergenic |
| AGGTGGTTGCACCACCAGAG+AGG | 0.708305 | 1.1:-40744374 | MS.gene034501:CDS |
| CTTCATAGATAGGAACTGTG+TGG | 0.711555 | 1.1:+40744877 | None:intergenic |
| TACCAACCATCACACCAGTG+TGG | 0.726907 | 1.1:+40746051 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTACAAAACCATTATT+TGG | + | chr1.1:40745527-40745546 | None:intergenic | 15.0% |
| !! | AACTTTAAATATCCAAATAA+TGG | - | chr1.1:40745512-40745531 | MS.gene034501:intron | 15.0% |
| !!! | TTATTTTCCTTTCATTTTAA+AGG | + | chr1.1:40746302-40746321 | None:intergenic | 15.0% |
| !!! | TTTAAAGTTAGAAAATGAAA+TGG | + | chr1.1:40745553-40745572 | None:intergenic | 15.0% |
| !!! | TTTTATAATGTTTTAAATCG+TGG | + | chr1.1:40744101-40744120 | None:intergenic | 15.0% |
| !!! | TTTTTATCAAATTACTTGTA+TGG | + | chr1.1:40744966-40744985 | None:intergenic | 15.0% |
| !! | ATATCTTAACAATTCTCAAA+AGG | + | chr1.1:40744864-40744883 | None:intergenic | 20.0% |
| !! | GTTAAGATATATATGAAAAG+TGG | - | chr1.1:40744874-40744893 | MS.gene034501:CDS | 20.0% |
| !! | TAATGAGTTAGATAGAAATA+TGG | - | chr1.1:40744147-40744166 | MS.gene034501:intron | 20.0% |
| !! | TCTTAAACCACATTAAAAAA+GGG | + | chr1.1:40746651-40746670 | None:intergenic | 20.0% |
| !!! | AAGTTTTGATTCCATTTTTT+TGG | + | chr1.1:40745497-40745516 | None:intergenic | 20.0% |
| !!! | ATATGTTTGAAATGATAGAA+AGG | - | chr1.1:40745149-40745168 | MS.gene034501:intron | 20.0% |
| ! | AAACATAGAAGAATCTTTAC+CGG | + | chr1.1:40744836-40744855 | None:intergenic | 25.0% |
| ! | AACCAAAATGTGTTAAATTG+TGG | + | chr1.1:40744363-40744382 | None:intergenic | 25.0% |
| ! | CAATTGTATAACACATATCA+AGG | + | chr1.1:40744280-40744299 | None:intergenic | 25.0% |
| ! | CTAATCAAATAAGATCAACA+AGG | + | chr1.1:40743888-40743907 | None:intergenic | 25.0% |
| ! | CTCTTAAACCACATTAAAAA+AGG | + | chr1.1:40746652-40746671 | None:intergenic | 25.0% |
| ! | CTGTCAAATTACCAAAAAAA+TGG | - | chr1.1:40745483-40745502 | MS.gene034501:intron | 25.0% |
| ! | GAAAGGAAAATAATGCATAA+AGG | - | chr1.1:40746309-40746328 | MS.gene034501:intron | 25.0% |
| ! | GAATTTGCAGGAATTAATAA+TGG | - | chr1.1:40745072-40745091 | MS.gene034501:intron | 25.0% |
| ! | GTTTATATGAGCTTATCTAT+AGG | - | chr1.1:40746376-40746395 | MS.gene034501:intron | 25.0% |
| ! | TGTTTATACATAGCACATAT+AGG | - | chr1.1:40746565-40746584 | MS.gene034501:intron | 25.0% |
| !! | CTTGTTGATCTTATTTGATT+AGG | - | chr1.1:40743886-40743905 | MS.gene034501:intron | 25.0% |
| !! | GATCTTATTTGATTAGGTAA+AGG | - | chr1.1:40743892-40743911 | MS.gene034501:intron | 25.0% |
| !! | GATGTGTTTTATATAATTGC+AGG | - | chr1.1:40744420-40744439 | MS.gene034501:CDS | 25.0% |
| !! | TACCACAATTTAACACATTT+TGG | - | chr1.1:40744358-40744377 | MS.gene034501:CDS | 25.0% |
| !!! | CTTTTTTAATGTGGTTTAAG+AGG | - | chr1.1:40746650-40746669 | MS.gene034501:intron | 25.0% |
| !!! | TGAAATACCCTTTTTTAATG+TGG | - | chr1.1:40746641-40746660 | MS.gene034501:intron | 25.0% |
| !!! | TTAGAGACCTTTAAAATGAA+AGG | - | chr1.1:40746292-40746311 | MS.gene034501:intron | 25.0% |
| !!! | TTTTTGGTAATTTGACAGAA+TGG | + | chr1.1:40745481-40745500 | None:intergenic | 25.0% |
| AAACGATCTGCAAATGAATA+TGG | - | chr1.1:40745043-40745062 | MS.gene034501:intron | 30.0% | |
| AAGTAGCATGAAAATTAAGG+TGG | - | chr1.1:40746164-40746183 | MS.gene034501:intron | 30.0% | |
| ACCAAGTAGCATGAAAATTA+AGG | - | chr1.1:40746161-40746180 | MS.gene034501:intron | 30.0% | |
| ATTTCCTGTGAACAATTGAA+GGG | + | chr1.1:40746741-40746760 | None:intergenic | 30.0% | |
| GAATTCTAATGAAATACGAG+TGG | + | chr1.1:40745022-40745041 | None:intergenic | 30.0% | |
| GATAAGCACTTATGCTATAA+GGG | - | chr1.1:40746587-40746606 | MS.gene034501:intron | 30.0% | |
| GATATTAGAAAGGATCTCTA+TGG | - | chr1.1:40746060-40746079 | MS.gene034501:CDS | 30.0% | |
| TAACAATTCCATGCTCAATT+GGG | + | chr1.1:40744597-40744616 | None:intergenic | 30.0% | |
| TCAAATAAGATCAACAAGGT+TGG | + | chr1.1:40743884-40743903 | None:intergenic | 30.0% | |
| TCTTGTAATCTAGTAGTACA+TGG | - | chr1.1:40744254-40744273 | MS.gene034501:intron | 30.0% | |
| TGATGAAGCTCAATCAAAAA+GGG | - | chr1.1:40744552-40744571 | MS.gene034501:CDS | 30.0% | |
| TGGCTTATGATAGAACATTA+TGG | - | chr1.1:40744167-40744186 | MS.gene034501:intron | 30.0% | |
| TGTAGACTTGACATTGAAAT+GGG | - | chr1.1:40745595-40745614 | MS.gene034501:intron | 30.0% | |
| TTCATAATCAAGAGCTATGT+AGG | + | chr1.1:40745851-40745870 | None:intergenic | 30.0% | |
| TTGTAGACTTGACATTGAAA+TGG | - | chr1.1:40745594-40745613 | MS.gene034501:intron | 30.0% | |
| ! | ACCTTAATTTTCATGCTACT+TGG | + | chr1.1:40746165-40746184 | None:intergenic | 30.0% |
| ! | ATAGGTATTGTTCTTGATTC+TGG | - | chr1.1:40745643-40745662 | MS.gene034501:intron | 30.0% |
| ! | ATATGGATTGTAGAATTTGC+AGG | - | chr1.1:40745060-40745079 | MS.gene034501:intron | 30.0% |
| ! | CGTTGTTTACATCTTGTTAT+AGG | - | chr1.1:40745625-40745644 | MS.gene034501:intron | 30.0% |
| ! | GGATTATGACTCTAATTTTG+AGG | + | chr1.1:40744945-40744964 | None:intergenic | 30.0% |
| ! | TAATAGTCAACAAGCTTGTT+TGG | - | chr1.1:40746349-40746368 | MS.gene034501:intron | 30.0% |
| ! | TGTTTGAAAAATGAAGCACT+TGG | - | chr1.1:40745204-40745223 | MS.gene034501:intron | 30.0% |
| ! | TGTTTTATATAATTGCAGGC+TGG | - | chr1.1:40744424-40744443 | MS.gene034501:CDS | 30.0% |
| ! | TTTTGTAATCAAGCACTACT+TGG | - | chr1.1:40744393-40744412 | MS.gene034501:CDS | 30.0% |
| !! | AGGTAAAGGTTTTTCGAAAA+AGG | - | chr1.1:40743906-40743925 | MS.gene034501:intron | 30.0% |
| !! | TATGTTGTTTCATGTATACC+AGG | + | chr1.1:40746015-40746034 | None:intergenic | 30.0% |
| AAGGCTGAATATGATGAATC+AGG | - | chr1.1:40746715-40746734 | MS.gene034501:CDS | 35.0% | |
| AGCATGGAATTGTTAGTAAC+TGG | - | chr1.1:40744602-40744621 | MS.gene034501:CDS | 35.0% | |
| AGTGAAGCTGACCTATAATT+TGG | - | chr1.1:40745453-40745472 | MS.gene034501:intron | 35.0% | |
| ATAAGATCAACAAGGTTGGA+TGG | + | chr1.1:40743880-40743899 | None:intergenic | 35.0% | |
| ATATAACTAACCTCACTTGG+TGG | - | chr1.1:40744203-40744222 | MS.gene034501:intron | 35.0% | |
| CATCTGCATTAGGAAAGAAA+AGG | + | chr1.1:40746686-40746705 | None:intergenic | 35.0% | |
| CATTTCCTGTGAACAATTGA+AGG | + | chr1.1:40746742-40746761 | None:intergenic | 35.0% | |
| CTAACAATTCCATGCTCAAT+TGG | + | chr1.1:40744598-40744617 | None:intergenic | 35.0% | |
| GATGAAGCTCAATCAAAAAG+GGG | - | chr1.1:40744553-40744572 | MS.gene034501:CDS | 35.0% | |
| GCATGGAATTGTTAGTAACT+GGG | - | chr1.1:40744603-40744622 | MS.gene034501:CDS | 35.0% | |
| GGATAAGCACTTATGCTATA+AGG | - | chr1.1:40746586-40746605 | MS.gene034501:intron | 35.0% | |
| GTGATGAAGCTCAATCAAAA+AGG | - | chr1.1:40744551-40744570 | MS.gene034501:CDS | 35.0% | |
| GTGTGATGTCGATATTAGAA+AGG | - | chr1.1:40746050-40746069 | MS.gene034501:CDS | 35.0% | |
| GTTCCATTATCACAAACAAG+AGG | + | chr1.1:40743836-40743855 | None:intergenic | 35.0% | |
| TAATGGAACTGGAATGGTTA+AGG | - | chr1.1:40743847-40743866 | MS.gene034501:CDS | 35.0% | |
| TATAACTAACCTCACTTGGT+GGG | - | chr1.1:40744204-40744223 | MS.gene034501:intron | 35.0% | |
| TATGGAAACATCGTATTGAG+TGG | - | chr1.1:40746078-40746097 | MS.gene034501:CDS | 35.0% | |
| TCCATATAACTAACCTCACT+TGG | - | chr1.1:40744200-40744219 | MS.gene034501:intron | 35.0% | |
| TGCAGGAATTAATAATGGCA+TGG | - | chr1.1:40745077-40745096 | MS.gene034501:intron | 35.0% | |
| TGTTAGTAACTGGGATGATA+TGG | - | chr1.1:40744612-40744631 | MS.gene034501:CDS | 35.0% | |
| TTTCTTTCCTAATGCAGATG+TGG | - | chr1.1:40746686-40746705 | MS.gene034501:intron | 35.0% | |
| ! | AAGAATCTTTACCGGTTGTA+CGG | + | chr1.1:40744828-40744847 | None:intergenic | 35.0% |
| ! | ACAGAATGGTGCCAAATTAT+AGG | + | chr1.1:40745467-40745486 | None:intergenic | 35.0% |
| ! | ACCAAGTGAGGTTAGTTATA+TGG | + | chr1.1:40744204-40744223 | None:intergenic | 35.0% |
| ! | AGTTTTCATCCTGCAATATG+TGG | - | chr1.1:40745419-40745438 | MS.gene034501:intron | 35.0% |
| ! | ATTGTTCTTGATTCTGGAGA+TGG | - | chr1.1:40745649-40745668 | MS.gene034501:intron | 35.0% |
| ! | CAACCTCTTGTTTGTGATAA+TGG | - | chr1.1:40743830-40743849 | MS.gene034501:CDS | 35.0% |
| ! | CTCGGTTAAGATTTTCATGA+GGG | + | chr1.1:40745764-40745783 | None:intergenic | 35.0% |
| !! | CTTGTTTGTGATAATGGAAC+TGG | - | chr1.1:40743836-40743855 | MS.gene034501:CDS | 35.0% |
| !! | TTGTGATAATGGAACTGGAA+TGG | - | chr1.1:40743841-40743860 | MS.gene034501:CDS | 35.0% |
| !!! | ATTTTCTCACGATTAGCCTT+TGG | + | chr1.1:40744724-40744743 | None:intergenic | 35.0% |
| AAGAGCTATGAGTTACCTGA+TGG | - | chr1.1:40745910-40745929 | MS.gene034501:CDS | 40.0% | |
| AAGTCATGCACTATACCTGT+TGG | + | chr1.1:40746257-40746276 | None:intergenic | 40.0% | |
| ACTAGCATAAAGCGAAAGCA+CGG | + | chr1.1:40744803-40744822 | None:intergenic | 40.0% | |
| AGAAGAACTGGATGTTCTTC+AGG | + | chr1.1:40744682-40744701 | None:intergenic | 40.0% | |
| AGCTATGTATGTTGCCATTC+AGG | - | chr1.1:40744777-40744796 | MS.gene034501:CDS | 40.0% | |
| AGGAATGCAGTGAAGTGAAA+TGG | - | chr1.1:40745169-40745188 | MS.gene034501:intron | 40.0% | |
| AGGGCATATCCTTCATAGAT+AGG | + | chr1.1:40745691-40745710 | None:intergenic | 40.0% | |
| ATGAAAATCTTAACCGAGCG+TGG | - | chr1.1:40745766-40745785 | MS.gene034501:CDS | 40.0% | |
| ATTCAAGACCCTGGATCATT+AGG | - | chr1.1:40744900-40744919 | MS.gene034501:CDS | 40.0% | |
| CACACAGTTCCTATCTATGA+AGG | - | chr1.1:40745679-40745698 | MS.gene034501:intron | 40.0% | |
| CATCCATAACCACATATTGC+AGG | + | chr1.1:40745431-40745450 | None:intergenic | 40.0% | |
| CATCCTGCAATATGTGGTTA+TGG | - | chr1.1:40745425-40745444 | MS.gene034501:intron | 40.0% | |
| CGCTATGACAATGTCATATG+TGG | + | chr1.1:40745243-40745262 | None:intergenic | 40.0% | |
| CTTCATAGATAGGAACTGTG+TGG | + | chr1.1:40745681-40745700 | None:intergenic | 40.0% | |
| GAACTGGAATGGTTAAGGTA+TGG | - | chr1.1:40743852-40743871 | MS.gene034501:CDS | 40.0% | |
| GGAATGCAGTGAAGTGAAAT+GGG | - | chr1.1:40745170-40745189 | MS.gene034501:intron | 40.0% | |
| GGACAAAAGGATGCATATGT+TGG | - | chr1.1:40744529-40744548 | MS.gene034501:CDS | 40.0% | |
| GGGATGATATGGAAAAGATC+TGG | - | chr1.1:40744623-40744642 | MS.gene034501:CDS | 40.0% | |
| GGGTATTTCAAACACATGTC+TGG | + | chr1.1:40746631-40746650 | None:intergenic | 40.0% | |
| GTACAGACACATCAGATCAA+TGG | + | chr1.1:40745371-40745390 | None:intergenic | 40.0% | |
| TGAATGGCAACATACATAGC+TGG | + | chr1.1:40744778-40744797 | None:intergenic | 40.0% | |
| TGTCAGACACTAACACATGT+CGG | - | chr1.1:40745333-40745352 | MS.gene034501:intron | 40.0% | |
| TTCAAGACCCTGGATCATTA+GGG | - | chr1.1:40744901-40744920 | MS.gene034501:CDS | 40.0% | |
| TTGCAATCCACATCTGCATT+AGG | + | chr1.1:40746696-40746715 | None:intergenic | 40.0% | |
| ! | AAGTATAGTGTCTGGATTGG+AGG | - | chr1.1:40746204-40746223 | MS.gene034501:intron | 40.0% |
| ! | AATGCAGATGTGGATTGCAA+AGG | - | chr1.1:40746696-40746715 | MS.gene034501:intron | 40.0% |
| ! | AGGAAGTATAGTGTCTGGAT+TGG | - | chr1.1:40746201-40746220 | MS.gene034501:intron | 40.0% |
| ! | CTAAAGTACCCAATTGAGCA+TGG | - | chr1.1:40744586-40744605 | MS.gene034501:CDS | 40.0% |
| ! | GCTCGGTTAAGATTTTCATG+AGG | + | chr1.1:40745765-40745784 | None:intergenic | 40.0% |
| ! | TGAAGCACCACTTAATCCAA+AGG | - | chr1.1:40744705-40744724 | MS.gene034501:CDS | 40.0% |
| !! | ATACATAGCTGGAGCATTGA+AGG | + | chr1.1:40744767-40744786 | None:intergenic | 40.0% |
| !! | CGATTAGCCTTTGGATTAAG+TGG | + | chr1.1:40744715-40744734 | None:intergenic | 40.0% |
| ACACTATACTTCCTCTCTGG+TGG | + | chr1.1:40746195-40746214 | None:intergenic | 45.0% | |
| AGAAACCTCAAAGACGAGCT+CGG | - | chr1.1:40745879-40745898 | MS.gene034501:CDS | 45.0% | |
| AGGAGCTTCCATACCAATCA+TGG | + | chr1.1:40745995-40746014 | None:intergenic | 45.0% | |
| AGTTCGACCCTAATGATCCA+GGG | + | chr1.1:40744911-40744930 | None:intergenic | 45.0% | |
| ATACTATGATGTCGCTGTCG+CGG | + | chr1.1:40743985-40744004 | None:intergenic | 45.0% | |
| ATCACAAGTGACCGCAATTC+TGG | - | chr1.1:40744023-40744042 | MS.gene034501:intron | 45.0% | |
| ATGATTGGTATGGAAGCTCC+TGG | - | chr1.1:40745994-40746013 | MS.gene034501:CDS | 45.0% | |
| ATTGTGATCACCTGTCCATC+AGG | + | chr1.1:40745928-40745947 | None:intergenic | 45.0% | |
| CAGACACTATACTTCCTCTC+TGG | + | chr1.1:40746198-40746217 | None:intergenic | 45.0% | |
| CATGCACTATACCTGTTGGA+AGG | + | chr1.1:40746253-40746272 | None:intergenic | 45.0% | |
| CATTGCTGATAGGATGAGCA+AGG | - | chr1.1:40746122-40746141 | MS.gene034501:intron | 45.0% | |
| GATGGACAGGTGATCACAAT+AGG | - | chr1.1:40745928-40745947 | MS.gene034501:CDS | 45.0% | |
| GCTTCCATACCAATCATGGA+TGG | + | chr1.1:40745991-40746010 | None:intergenic | 45.0% | |
| GGAAACATCGTATTGAGTGG+TGG | - | chr1.1:40746081-40746100 | MS.gene034501:CDS | 45.0% | |
| GTGCTTTCGCTTTATGCTAG+TGG | - | chr1.1:40744802-40744821 | MS.gene034501:CDS | 45.0% | |
| GTGGACGACCTACAATACTA+GGG | + | chr1.1:40744483-40744502 | None:intergenic | 45.0% | |
| TAATTGCAGGCTGGATTTGC+CGG | - | chr1.1:40744433-40744452 | MS.gene034501:CDS | 45.0% | |
| TAGTTCGACCCTAATGATCC+AGG | + | chr1.1:40744912-40744931 | None:intergenic | 45.0% | |
| TGAAATCGTGAGAGACGTGA+AGG | - | chr1.1:40745816-40745835 | MS.gene034501:CDS | 45.0% | |
| TTCAGGACAACGGAAACGTT+CGG | + | chr1.1:40745956-40745975 | None:intergenic | 45.0% | |
| ! | AAGTCTTATCCCACCAAGTG+AGG | + | chr1.1:40744216-40744235 | None:intergenic | 45.0% |
| ! | ACTGGTGTGATGGTTGGTAT+GGG | - | chr1.1:40744508-40744527 | MS.gene034501:CDS | 45.0% |
| ! | CAGAGAGGAAGTATAGTGTC+TGG | - | chr1.1:40746196-40746215 | MS.gene034501:intron | 45.0% |
| ! | CTATGAGTTACCTGATGGAC+AGG | - | chr1.1:40745915-40745934 | MS.gene034501:CDS | 45.0% |
| ! | GATGGTTGGTATGGGACAAA+AGG | - | chr1.1:40744516-40744535 | MS.gene034501:CDS | 45.0% |
| !! | GGAAGAGTACTTCAGGACAA+CGG | + | chr1.1:40745966-40745985 | None:intergenic | 45.0% |
| !!! | TTTATTTCTTAAATTATTAT+CGG | + | chr1.1:40745275-40745294 | None:intergenic | 5.0% |
| AAGTGGCGTATTCAAGACCC+TGG | - | chr1.1:40744891-40744910 | MS.gene034501:CDS | 50.0% | |
| AATTGCGATCCTTGCGAGTC+TGG | - | chr1.1:40744316-40744335 | MS.gene034501:intron | 50.0% | |
| AGCTGATGCAGCCAGAATTG+CGG | + | chr1.1:40744037-40744056 | None:intergenic | 50.0% | |
| ATCCTGCGTTTGGATCTTGC+AGG | - | chr1.1:40745721-40745740 | MS.gene034501:intron | 50.0% | |
| ATTGCGATCCTTGCGAGTCT+GGG | - | chr1.1:40744317-40744336 | MS.gene034501:CDS | 50.0% | |
| CAGGCCCTTCAATTGTTCAC+AGG | - | chr1.1:40746734-40746753 | MS.gene034501:CDS | 50.0% | |
| CCAGCCATCCATGATTGGTA+TGG | - | chr1.1:40745984-40746003 | MS.gene034501:CDS | 50.0% | |
| CCATACCAATCATGGATGGC+TGG | + | chr1.1:40745987-40746006 | None:intergenic | 50.0% | |
| CGTGGACGACCTACAATACT+AGG | + | chr1.1:40744484-40744503 | None:intergenic | 50.0% | |
| CTCATCCTATCAGCAATGCC+GGG | + | chr1.1:40746120-40746139 | None:intergenic | 50.0% | |
| CTCTTCCAGCCATCCATGAT+TGG | - | chr1.1:40745979-40745998 | MS.gene034501:CDS | 50.0% | |
| GAGCAAGGAGATCACAGCAT+TGG | - | chr1.1:40746137-40746156 | MS.gene034501:intron | 50.0% | |
| GAGTCTGGGGAATTGGAACA+CGG | - | chr1.1:40744331-40744350 | MS.gene034501:CDS | 50.0% | |
| GCGGTGTTCCCTAGTATTGT+AGG | - | chr1.1:40744472-40744491 | MS.gene034501:CDS | 50.0% | |
| GCTCATCCTATCAGCAATGC+CGG | + | chr1.1:40746121-40746140 | None:intergenic | 50.0% | |
| GGTGCTTCAGTGAGAAGAAC+TGG | + | chr1.1:40744694-40744713 | None:intergenic | 50.0% | |
| GTCTCTCACGATTTCACGCT+CGG | + | chr1.1:40745812-40745831 | None:intergenic | 50.0% | |
| TACCAACCATCACACCAGTG+TGG | + | chr1.1:40744507-40744526 | None:intergenic | 50.0% | |
| TATGCTAGTGGCCGTACAAC+CGG | - | chr1.1:40744814-40744833 | MS.gene034501:CDS | 50.0% | |
| TCATCCTATCAGCAATGCCG+GGG | + | chr1.1:40746119-40746138 | None:intergenic | 50.0% | |
| ! | CACTGGTGTGATGGTTGGTA+TGG | - | chr1.1:40744507-40744526 | MS.gene034501:CDS | 50.0% |
| !! | ATACCTGTTGGAAGGTGCTG+AGG | + | chr1.1:40746245-40746264 | None:intergenic | 50.0% |
| !! | CTGGATTGGAGGCTCCATTT+TGG | - | chr1.1:40746215-40746234 | MS.gene034501:intron | 50.0% |
| !! | GATGGCTGGAAGAGTACTTC+AGG | + | chr1.1:40745973-40745992 | None:intergenic | 50.0% |
| !! | GGTGAAAGAGTATCCACGCT+CGG | + | chr1.1:40745782-40745801 | None:intergenic | 50.0% |
| !! | TACCTGTTGGAAGGTGCTGA+GGG | + | chr1.1:40746244-40746263 | None:intergenic | 50.0% |
| AACAGCCGAGCTCGTCTTTG+AGG | + | chr1.1:40745887-40745906 | None:intergenic | 55.0% | |
| AACGCAGGATTGCGTGTGGA+AGG | + | chr1.1:40745711-40745730 | None:intergenic | 55.0% | |
| ACGCAGGATTGCGTGTGGAA+GGG | + | chr1.1:40745710-40745729 | None:intergenic | 55.0% | |
| ATACTAGGGAACACCGCCCT+TGG | + | chr1.1:40744469-40744488 | None:intergenic | 55.0% | |
| GACCTGCAAGATCCAAACGC+AGG | + | chr1.1:40745726-40745745 | None:intergenic | 55.0% | |
| GATTTCACGCTCGGCTGTTG+TGG | + | chr1.1:40745803-40745822 | None:intergenic | 55.0% | |
| GCTGCATTTGACTGCGAGTC+TGG | - | chr1.1:40744054-40744073 | MS.gene034501:intron | 55.0% | |
| GGTGGTACGACTATGTTCCC+CGG | - | chr1.1:40746099-40746118 | MS.gene034501:CDS | 55.0% | |
| TCCAAACGCAGGATTGCGTG+TGG | + | chr1.1:40745715-40745734 | None:intergenic | 55.0% | |
| TCCAATTCCCCAGACTCGCA+AGG | + | chr1.1:40744328-40744347 | None:intergenic | 55.0% | |
| TCCACACGCAATCCTGCGTT+TGG | - | chr1.1:40745711-40745730 | MS.gene034501:intron | 55.0% | |
| TCCTTGCGAGTCTGGGGAAT+TGG | - | chr1.1:40744324-40744343 | MS.gene034501:CDS | 55.0% | |
| TGCCGGAGATGATGCACCAA+GGG | - | chr1.1:40744450-40744469 | MS.gene034501:CDS | 55.0% | |
| TGTTCCCCGGCATTGCTGAT+AGG | - | chr1.1:40746112-40746131 | MS.gene034501:CDS | 55.0% | |
| TTCCCTCAGCACCTTCCAAC+AGG | - | chr1.1:40746239-40746258 | MS.gene034501:intron | 55.0% | |
| TTGCCGGAGATGATGCACCA+AGG | - | chr1.1:40744449-40744468 | MS.gene034501:CDS | 55.0% | |
| TTGCGATCCTTGCGAGTCTG+GGG | - | chr1.1:40744318-40744337 | MS.gene034501:CDS | 55.0% | |
| ! | AAGCGAAAGCACGGCCTGAA+TGG | + | chr1.1:40744794-40744813 | None:intergenic | 55.0% |
| ! | GGTGCTGAGGGAAGCCAAAA+TGG | + | chr1.1:40746232-40746251 | None:intergenic | 55.0% |
| ACCATCACACCAGTGTGGCG+TGG | + | chr1.1:40744502-40744521 | None:intergenic | 60.0% | |
| AGGTGGTTGCACCACCAGAG+AGG | - | chr1.1:40746181-40746200 | MS.gene034501:intron | 60.0% | |
| CGCCACACTGGTGTGATGGT+TGG | - | chr1.1:40744502-40744521 | MS.gene034501:CDS | 60.0% | |
| CGGAGATGATGCACCAAGGG+CGG | - | chr1.1:40744453-40744472 | MS.gene034501:CDS | 60.0% | |
| TCCACGCCACACTGGTGTGA+TGG | - | chr1.1:40744498-40744517 | MS.gene034501:CDS | 60.0% | |
| TCGTGGCAGCAGTCATGTCG+CGG | + | chr1.1:40744084-40744103 | None:intergenic | 60.0% | |
| ! | CGCCCTTGGTGCATCATCTC+CGG | + | chr1.1:40744455-40744474 | None:intergenic | 60.0% |
| GTAGGTCGTCCACGCCACAC+TGG | - | chr1.1:40744490-40744509 | MS.gene034501:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 40743809 | 40746768 | 40743809 | ID=MS.gene034501 |
| chr1.1 | mRNA | 40743809 | 40746768 | 40743809 | ID=MS.gene034501.t1;Parent=MS.gene034501 |
| chr1.1 | exon | 40746709 | 40746768 | 40746709 | ID=MS.gene034501.t1.exon1;Parent=MS.gene034501.t1 |
| chr1.1 | CDS | 40746709 | 40746768 | 40746709 | ID=cds.MS.gene034501.t1;Parent=MS.gene034501.t1 |
| chr1.1 | exon | 40745742 | 40746135 | 40745742 | ID=MS.gene034501.t1.exon2;Parent=MS.gene034501.t1 |
| chr1.1 | CDS | 40745742 | 40746135 | 40745742 | ID=cds.MS.gene034501.t1;Parent=MS.gene034501.t1 |
| chr1.1 | exon | 40744317 | 40744930 | 40744317 | ID=MS.gene034501.t1.exon3;Parent=MS.gene034501.t1 |
| chr1.1 | CDS | 40744317 | 40744930 | 40744317 | ID=cds.MS.gene034501.t1;Parent=MS.gene034501.t1 |
| chr1.1 | exon | 40743809 | 40743874 | 40743809 | ID=MS.gene034501.t1.exon4;Parent=MS.gene034501.t1 |
| chr1.1 | CDS | 40743809 | 40743874 | 40743809 | ID=cds.MS.gene034501.t1;Parent=MS.gene034501.t1 |
| Gene Sequence |
| Protein sequence |
