AlfalfaGEDB | MS.gene82765

M. sativa cultivar XinJiangDaYe / MS.gene82765

KEGG: K10355
GO: -
PFAM: PF00022.22

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene82765.t1	XP_013450689.1	100	377	0	0	1	377	1	377	3.60E-217	763.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene82765.t1	A2XLF2	96.8	377	12	0	1	377	1	377	1.7e-215	749.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene82765.t1	A0A072U4T5	100.0	377	0	0	1	377	1	377	2.6e-217	763.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene053110	MS.gene82765	0.969518	3.06E-130	-1.69E-46
MS.gene056910	MS.gene82765	0.811664	6.25E-51	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene034501	MS.gene82765	PPI
MS.gene82765	MS.gene79962	PPI
MS.gene82765	MS.gene032698	PPI
MS.gene82765	MS.gene30959	PPI
MS.gene82765	MS.gene68222	PPI
MS.gene82765	MS.gene45491	PPI
MS.gene82765	MS.gene45493	PPI
MS.gene82765	MS.gene44405	PPI
MS.gene82765	MS.gene017881	PPI
MS.gene82765	MS.gene92731	PPI
MS.gene82765	MS.gene024155	PPI
MS.gene45491	MS.gene82765	PPI
MS.gene82765	MS.gene052120	PPI
MS.gene82765	MS.gene77958	PPI
MS.gene82765	MS.gene55068	PPI
MS.gene82765	MS.gene52664	PPI
MS.gene017992	MS.gene82765	PPI
MS.gene82765	MS.gene37081	PPI
MS.gene82765	MS.gene001874	PPI
MS.gene82765	MS.gene037838	PPI
MS.gene82765	MS.gene86783	PPI
MS.gene82765	MS.gene063165	PPI
MS.gene82765	MS.gene055991	PPI
MS.gene31004	MS.gene82765	PPI
MS.gene31154	MS.gene82765	PPI
MS.gene82765	MS.gene000108	PPI
MS.gene82765	MS.gene049321	PPI
MS.gene064894	MS.gene82765	PPI
MS.gene82765	MS.gene86676	PPI
MS.gene82765	MS.gene014281	PPI
MS.gene055437	MS.gene82765	PPI
MS.gene39046	MS.gene82765	PPI
MS.gene82765	MS.gene065414	PPI
MS.gene82765	MS.gene06446	PPI
MS.gene79962	MS.gene82765	PPI
MS.gene82765	MS.gene014110	PPI
MS.gene82765	MS.gene42528	PPI
MS.gene82765	MS.gene053110	PPI
MS.gene82765	MS.gene045007	PPI
MS.gene82765	MS.gene89726	PPI
MS.gene033590	MS.gene82765	PPI
MS.gene044849	MS.gene82765	PPI
MS.gene82765	MS.gene37274	PPI
MS.gene82765	MS.gene04628	PPI
MS.gene82765	MS.gene013348	PPI
MS.gene82765	MS.gene018887	PPI
MS.gene82765	MS.gene46685	PPI
MS.gene82765	MS.gene022650	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene82765.t1	MTR_6g004000	100.000	377	0	0	1	377	1	377	0.0	784
MS.gene82765.t1	MTR_0015s0130	97.613	377	9	0	1	377	1	377	0.0	771
MS.gene82765.t1	MTR_7g026230	97.082	377	11	0	1	377	1	377	0.0	769
MS.gene82765.t1	MTR_2g096840	97.082	377	11	0	1	377	1	377	0.0	768
MS.gene82765.t1	MTR_7g093260	96.021	377	15	0	1	377	1	377	0.0	763
MS.gene82765.t1	MTR_3g095530	95.491	377	17	0	1	377	1	377	0.0	761
MS.gene82765.t1	MTR_2g008050	93.899	377	23	0	1	377	1	377	0.0	754
MS.gene82765.t1	MTR_7g027185	42.744	379	203	3	10	374	7	385	3.61e-120	353
MS.gene82765.t1	MTR_7g027185	43.944	355	186	2	10	351	7	361	2.68e-117	345
MS.gene82765.t1	MTR_7g027185	46.906	307	161	1	10	314	7	313	1.07e-109	324
MS.gene82765.t1	MTR_5g066400	37.584	447	205	12	1	376	1	444	3.83e-92	283
MS.gene82765.t1	MTR_8g464900	36.806	432	200	11	1	362	1	429	1.28e-85	266
MS.gene82765.t1	MTR_5g066400	34.978	446	190	12	1	376	1	416	2.49e-79	249
MS.gene82765.t1	MTR_8g089630	34.063	411	221	8	10	372	10	418	6.58e-72	231
MS.gene82765.t1	MTR_5g066400	34.500	400	191	11	1	332	1	397	2.72e-68	221
MS.gene82765.t1	MTR_3g030550	37.500	376	209	9	11	377	5	363	2.79e-68	219
MS.gene82765.t1	MTR_2g445210	27.896	423	239	7	8	366	6	426	2.48e-56	191
MS.gene82765.t1	MTR_8g007440	34.470	264	146	7	77	319	9	266	2.02e-45	157
MS.gene82765.t1	MTR_2g445210	26.344	372	208	7	8	315	6	375	2.64e-42	152
MS.gene82765.t1	MTR_3g010170	29.966	297	184	9	91	371	179	467	8.27e-41	150
MS.gene82765.t1	MTR_8g070520	30.717	293	176	10	91	366	187	469	2.06e-36	138
MS.gene82765.t1	MTR_8g070520	30.216	278	168	9	91	352	187	454	4.51e-33	129
MS.gene82765.t1	MTR_3g067945	29.762	252	158	7	9	245	21	268	1.38e-23	102
MS.gene82765.t1	MTR_3g067945	31.967	122	80	2	250	368	586	707	3.79e-15	77.4
MS.gene82765.t1	MTR_8g008540	70.270	37	11	0	340	376	41	77	4.15e-13	64.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene82765.t1	AT3G12110	96.817	377	12	0	1	377	1	377	0.0	767
MS.gene82765.t1	AT3G53750	96.021	377	15	0	1	377	1	377	0.0	763
MS.gene82765.t1	AT3G53750	96.021	377	15	0	1	377	1	377	0.0	763
MS.gene82765.t1	AT2G37620	96.021	377	15	0	1	377	1	377	0.0	763
MS.gene82765.t1	AT2G37620	96.021	377	15	0	1	377	1	377	0.0	763
MS.gene82765.t1	AT2G37620	96.021	377	15	0	1	377	1	377	0.0	763
MS.gene82765.t1	AT2G37620	96.021	377	15	0	1	377	1	377	0.0	763
MS.gene82765.t1	AT3G46520	95.756	377	16	0	1	377	1	377	0.0	759
MS.gene82765.t1	AT3G46520	95.756	377	16	0	1	377	1	377	0.0	759
MS.gene82765.t1	AT5G59370	95.491	377	17	0	1	377	1	377	0.0	758
MS.gene82765.t1	AT5G59370	95.491	377	17	0	1	377	1	377	0.0	758
MS.gene82765.t1	AT5G09810	94.695	377	20	0	1	377	1	377	0.0	756
MS.gene82765.t1	AT1G49240	92.308	377	29	0	1	377	1	377	0.0	746
MS.gene82765.t1	AT3G18780	92.042	377	30	0	1	377	1	377	0.0	744
MS.gene82765.t1	AT3G18780	92.042	377	30	0	1	377	1	377	0.0	744
MS.gene82765.t1	AT3G18780	91.922	359	29	0	1	359	1	359	0.0	705
MS.gene82765.t1	AT2G42100	84.511	368	57	0	10	377	11	378	0.0	678
MS.gene82765.t1	AT2G42090	70.270	370	105	1	7	376	1	365	0.0	568
MS.gene82765.t1	AT2G42170	77.711	332	71	1	46	377	1	329	0.0	560
MS.gene82765.t1	AT2G42170	77.711	332	71	1	46	377	1	329	0.0	560
MS.gene82765.t1	AT2G42170	77.564	312	67	1	46	357	1	309	0.0	523
MS.gene82765.t1	AT2G42170	77.564	312	67	1	46	357	1	309	0.0	523
MS.gene82765.t1	AT2G42170	77.876	226	47	1	152	377	9	231	4.17e-132	377
MS.gene82765.t1	AT3G27000	43.008	379	202	3	10	374	7	385	2.36e-121	356
MS.gene82765.t1	AT1G18450	37.020	443	209	9	1	376	1	440	3.29e-94	289
MS.gene82765.t1	AT1G13180	33.656	413	222	9	10	373	9	418	3.65e-72	231
MS.gene82765.t1	AT3G60830	37.995	379	211	9	7	377	1	363	3.51e-68	219
MS.gene82765.t1	AT3G33520	30.166	421	236	7	10	377	5	420	1.55e-59	198
MS.gene82765.t1	AT5G56180	30.986	284	171	9	91	358	50	324	3.93e-36	134
MS.gene82765.t1	AT5G56180	30.986	284	171	9	91	358	182	456	2.79e-35	135
MS.gene82765.t1	AT3G12380	30.620	258	154	8	9	245	21	274	1.71e-26	111
MS.gene82765.t1	AT3G12380	32.414	145	94	2	228	368	572	716	4.24e-16	80.5
MS.gene82765.t1	AT3G12380	30.469	256	151	8	9	245	21	268	8.90e-26	109
MS.gene82765.t1	AT3G12380	32.414	145	94	2	228	368	566	710	4.00e-16	80.5
MS.gene82765.t1	AT1G73910	35.862	145	74	3	1	129	1	142	1.98e-23	95.5
MS.gene82765.t1	AT1G73910	35.862	145	74	3	1	129	1	142	1.98e-23	95.5
MS.gene82765.t1	AT5G56180	31.683	202	115	8	91	281	182	371	5.14e-20	90.9
MS.gene82765.t1	AT1G73910	29.268	123	71	2	1	107	1	123	3.00e-12	64.7

Find 118 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATGGTAACATTGTCCTTTC+AGG	0.196967	6.1:-59376	MS.gene82765:CDS
TGAAAGTCTCAAACATGATT+TGG	0.228707	6.1:+60217	None:intergenic
GCAGGTATTGTGTTGGATTC+TGG	0.230442	6.1:-59811	MS.gene82765:intron
CGCCATCCTTCGTCTTGATT+TGG	0.250680	6.1:-59737	MS.gene82765:CDS
TGCTATGTATGTGGCCATTC+AGG	0.263866	6.1:-60187	MS.gene82765:CDS
AAGAGAACTGGATGCTCTTC+GGG	0.272839	6.1:+60285	None:intergenic
CACCTTGATCTTCATGCTAC+TGG	0.286712	6.1:+59291	None:intergenic
GTCAACATCACATTTCATTA+TGG	0.291645	6.1:+59414	None:intergenic
CTGGATTGGTGGTTCTATCT+TGG	0.314091	6.1:-59239	MS.gene82765:CDS
AGCATGGTATTGTTAGCAAT+TGG	0.332769	6.1:-60362	MS.gene82765:CDS
CTAACAATACCATGCTCAAT+TGG	0.337000	6.1:+60369	None:intergenic
ATCTTCTCACGATTGGCCTT+TGG	0.345852	6.1:+60243	None:intergenic
CTCCACTGCAGAGCTGGTCT+TGG	0.349066	6.1:+59567	None:intergenic
CGATTGGCCTTTGGATTAAG+AGG	0.360842	6.1:+60252	None:intergenic
AAACCTGTTGGAAGGTGCTT+AGG	0.362509	6.1:+59212	None:intergenic
GAAAGTCTCAAACATGATTT+GGG	0.367813	6.1:+60218	None:intergenic
GGGATGACATGGAAAAGATT+TGG	0.369928	6.1:-60341	MS.gene82765:CDS
TACTGGTGTTATGGTTGGTA+TGG	0.379253	6.1:-60457	MS.gene82765:CDS
CACTTCCTATGCACAATTGA+TGG	0.381676	6.1:+59047	None:intergenic
GGAGGTACAACCATGTTTCC+TGG	0.389369	6.1:-59355	MS.gene82765:CDS
TCCTCGTCATACTGGTGTTA+TGG	0.389893	6.1:-60466	MS.gene82765:CDS
GGAGCTTCTGTTAAGAGAAC+TGG	0.393950	6.1:+60273	None:intergenic
GTTGGTCGTCCTCGTCATAC+TGG	0.402593	6.1:-60474	MS.gene82765:CDS
AGGGCATAACCCTCGTAGAT+AGG	0.410475	6.1:+59766	None:intergenic
GCCGTGTTTCCCAGCATTGT+TGG	0.417879	6.1:-60492	MS.gene82765:CDS
TAAGAGAACTGGATGCTCTT+CGG	0.421656	6.1:+60284	None:intergenic
GATGGGCAAGTCATCACTAT+TGG	0.422821	6.1:-59526	MS.gene82765:CDS
ATCCCTAAGCACCTTCCAAC+AGG	0.423722	6.1:-59215	MS.gene82765:intron
TTGGGTCATCTTCTCACGAT+TGG	0.425034	6.1:+60236	None:intergenic
CTTGTTTGTGACAATGGAAC+GGG	0.425360	6.1:-60677	MS.gene82765:CDS
ATCCTTCGTCTTGATTTGGC+TGG	0.433881	6.1:-59733	MS.gene82765:CDS
GCTCTTCTCCACTGCAGAGC+TGG	0.449641	6.1:+59561	None:intergenic
CAACCTCTTGTTTGTGACAA+TGG	0.449997	6.1:-60683	MS.gene82765:CDS
ATAGTGATGACTTGCCCATC+AGG	0.457656	6.1:+59529	None:intergenic
CCAACCATCCATGGTGGGAA+TGG	0.470099	6.1:-59470	MS.gene82765:CDS
CTGAGAGAAAGTACAGTGTC+TGG	0.474213	6.1:-59258	MS.gene82765:CDS
AACCTGTTGGAAGGTGCTTA+GGG	0.475906	6.1:+59213	None:intergenic
ACCTTGATCTTCATGCTACT+GGG	0.478858	6.1:+59292	None:intergenic
ACGAGGACGACCAACAATGC+TGG	0.486180	6.1:+60482	None:intergenic
GCTTCCATTCCCACCATGGA+TGG	0.492783	6.1:+59466	None:intergenic
TTTCATTATGGAGTTGTAAG+TGG	0.494092	6.1:+59426	None:intergenic
GACACGAAGCTCATTATAGA+AGG	0.496324	6.1:+60311	None:intergenic
TACGCCAGTGGTCGTACAAC+CGG	0.497426	6.1:-60150	MS.gene82765:intron
TAACAATACCATGCTCAATT+GGG	0.501628	6.1:+60370	None:intergenic
GATGGTTGGTATAAGACCTC+TGG	0.505376	6.1:+59484	None:intergenic
CACAATTTCACGCTCTGCTG+AGG	0.506159	6.1:+59651	None:intergenic
AAGTACAGTGTCTGGATTGG+TGG	0.508102	6.1:-59250	MS.gene82765:CDS
CCATTCCCACCATGGATGGT+TGG	0.508876	6.1:+59470	None:intergenic
AAGGCTGAGTATGATGAGTC+TGG	0.508996	6.1:-59071	MS.gene82765:CDS
TGAATGGCCACATACATAGC+AGG	0.510407	6.1:+60189	None:intergenic
TGCAGCTTCCATTCCCACCA+TGG	0.512897	6.1:+59462	None:intergenic
CAGACACTGTACTTTCTCTC+AGG	0.515639	6.1:+59259	None:intergenic
GCATGGTATTGTTAGCAATT+GGG	0.518576	6.1:-60361	MS.gene82765:CDS
GAGTGAAAGAACAGCCTGAA+TGG	0.531083	6.1:+60173	None:intergenic
GACGAAGGATGGCGTGTGGG+AGG	0.532816	6.1:+59746	None:intergenic
ATTGTGTTGGATTCTGGTGA+TGG	0.535950	6.1:-59805	MS.gene82765:CDS
AAAGGACAATGTTACCATAC+AGG	0.536912	6.1:+59380	None:intergenic
CTAGCTCTTGCTCATAGTCA+AGG	0.538467	6.1:+59596	None:intergenic
ACGAAGGATGGCGTGTGGGA+GGG	0.539544	6.1:+59747	None:intergenic
GGGCATAACCCTCGTAGATA+GGG	0.542873	6.1:+59767	None:intergenic
ATCAGCAATGCCAGGAAACA+TGG	0.545439	6.1:+59345	None:intergenic
CGTCATACTGGTGTTATGGT+TGG	0.545699	6.1:-60462	MS.gene82765:CDS
CTCATTCTATCAGCAATGCC+AGG	0.546672	6.1:+59337	None:intergenic
TGTTAGCAATTGGGATGACA+TGG	0.552376	6.1:-60352	MS.gene82765:CDS
CAATGCCCCTGCTATGTATG+TGG	0.552795	6.1:-60196	MS.gene82765:CDS
AGCCAAATCAAGACGAAGGA+TGG	0.553843	6.1:+59735	None:intergenic
ACCAACAATGCTGGGAAACA+CGG	0.555422	6.1:+60491	None:intergenic
TGAAATGTGATGTTGACATC+AGG	0.556293	6.1:-59408	MS.gene82765:CDS
GAGGGACATGAAGGAAAAGC+TGG	0.556301	6.1:-59629	MS.gene82765:CDS
AGAGCTATGAGTTGCCTGAT+GGG	0.561878	6.1:-59543	MS.gene82765:CDS
AAGAGCTATGAGTTGCCTGA+TGG	0.561934	6.1:-59544	MS.gene82765:CDS
CGAGGACGACCAACAATGCT+GGG	0.562344	6.1:+60483	None:intergenic
ACCCAGTAGCATGAAGATCA+AGG	0.570670	6.1:-59293	MS.gene82765:CDS
ACTGGTGTTATGGTTGGTAT+GGG	0.571151	6.1:-60456	MS.gene82765:CDS
AATTTCACGCTCTGCTGAGG+TGG	0.572067	6.1:+59654	None:intergenic
TCTTGTTTGTGACAATGGAA+CGG	0.582019	6.1:-60678	MS.gene82765:CDS
ATCCAAGACCAGCTCTGCAG+TGG	0.582930	6.1:-59569	MS.gene82765:CDS
GACATCAGGAAAGACCTGTA+TGG	0.586044	6.1:-59394	MS.gene82765:CDS
TGAAATTGTGAGGGACATGA+AGG	0.588484	6.1:-59638	MS.gene82765:CDS
TTGTGACAATGGAACGGGAA+TGG	0.597725	6.1:-60672	MS.gene82765:CDS
GGTCTTATACCAACCATCCA+TGG	0.598084	6.1:-59479	MS.gene82765:CDS
CTGGACCATCAATTGTGCAT+AGG	0.599358	6.1:-59052	MS.gene82765:CDS
CAATGGAACGGGAATGGTCA+AGG	0.601070	6.1:-60666	MS.gene82765:intron
CTCAAGTACCCAATTGAGCA+TGG	0.601570	6.1:-60378	MS.gene82765:CDS
ACATGGTTGTACCTCCTGAA+AGG	0.602998	6.1:+59362	None:intergenic
CAGCAGAGCGTGAAATTGTG+AGG	0.603654	6.1:-59648	MS.gene82765:CDS
ATTACCGGTTGTACGACCAC+TGG	0.605389	6.1:+60146	None:intergenic
AGAAGCTCCTCTTAATCCAA+AGG	0.605929	6.1:-60259	MS.gene82765:CDS
AGAAAGTACAGTGTCTGGAT+TGG	0.609058	6.1:-59253	MS.gene82765:CDS
ATGGTGGGAATGGAAGCTGC+AGG	0.613135	6.1:-59460	MS.gene82765:CDS
CAATTGGGTACTTGAGAGTG+AGG	0.613648	6.1:+60385	None:intergenic
CAAGACGAAGGATGGCGTGT+GGG	0.616699	6.1:+59743	None:intergenic
GTTCTTTCACTCTACGCCAG+TGG	0.617736	6.1:-60162	MS.gene82765:CDS
GTTCCATTGTCACAAACAAG+AGG	0.618990	6.1:+60680	None:intergenic
TAGCTCTTGCTCATAGTCAA+GGG	0.620110	6.1:+59597	None:intergenic
ATGAAAATTCTGACAGAACG+TGG	0.621840	6.1:-59688	MS.gene82765:CDS
AGCAGAGCGTGAAATTGTGA+GGG	0.623597	6.1:-59647	MS.gene82765:CDS
GAATGGCCACATACATAGCA+GGG	0.623873	6.1:+60190	None:intergenic
CATTGCTGATAGAATGAGCA+AGG	0.630326	6.1:-59332	MS.gene82765:CDS
GGTAACATTGTCCTTTCAGG+AGG	0.632428	6.1:-59373	MS.gene82765:CDS
ATGCTGGGAAACACGGCACG+CGG	0.638206	6.1:+60498	None:intergenic
TCAAGACGAAGGATGGCGTG+TGG	0.645593	6.1:+59742	None:intergenic
TGTGCAGATGTGGATTGCAA+AGG	0.646194	6.1:-59090	MS.gene82765:intron
GAAGAAGATGGCAGACGCTG+AGG	0.651588	6.1:-60711	None:intergenic
TTATACCAACCATCCATGGT+GGG	0.653612	6.1:-59475	MS.gene82765:CDS
AGATGCATATGTTGGTGATG+AGG	0.661651	6.1:-60427	MS.gene82765:CDS
CTTATACCAACCATCCATGG+TGG	0.662201	6.1:-59476	MS.gene82765:CDS
ACACTGTACTTTCTCTCAGG+CGG	0.665359	6.1:+59262	None:intergenic
GAGAACTGGATGCTCTTCGG+GGG	0.665855	6.1:+60287	None:intergenic
CCTCGTAGATAGGGACTGTG+TGG	0.679150	6.1:+59776	None:intergenic
CCACACAGTCCCTATCTACG+AGG	0.680054	6.1:-59776	MS.gene82765:CDS
AGAGAACTGGATGCTCTTCG+GGG	0.684661	6.1:+60286	None:intergenic
GACCAGCCAAATCAAGACGA+AGG	0.685950	6.1:+59731	None:intergenic
AATGGCCACATACATAGCAG+GGG	0.701226	6.1:+60191	None:intergenic
CACACAGTCCCTATCTACGA+GGG	0.710128	6.1:-59775	MS.gene82765:CDS
ACCATAACACCAGTATGACG+AGG	0.715543	6.1:+60465	None:intergenic
GATGAGGCACAATCTAAACG+TGG	0.755455	6.1:-60411	MS.gene82765:CDS
CAGTAGCATGAAGATCAAGG+TGG	0.775622	6.1:-59290	MS.gene82765:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTATTTTTCTTATTTTTGC+AGG	-	chr6.1:59915-59934	MS.gene82765:intron	15.0%
!!	AAATAAAAAAACAAACCTGT+TGG	+	chr6.1:60547-60566	None:intergenic	20.0%
!!	ATCATAATTGAAAACAAAAC+CGG	+	chr6.1:59893-59912	None:intergenic	20.0%
!!	TAATATCATGAAATGATTAC+CGG	+	chr6.1:59616-59635	None:intergenic	20.0%
!!!	TGTGATTTATAATTTTTCTC+CGG	-	chr6.1:59871-59890	MS.gene82765:intron	20.0%
!	AAAATGTGATCTATAATAGC+TGG	+	chr6.1:59106-59125	None:intergenic	25.0%
!	GACACATTATAGATTAACAT+TGG	-	chr6.1:59182-59201	MS.gene82765:intron	25.0%
!	GATATTATTATCCTATGCTT+GGG	-	chr6.1:59629-59648	MS.gene82765:CDS	25.0%
!	TGATATTATTATCCTATGCT+TGG	-	chr6.1:59628-59647	MS.gene82765:CDS	25.0%
!!!	ATTGGAATATACCATTTTTC+AGG	-	chr6.1:59200-59219	MS.gene82765:intron	25.0%
	AAAAAAACAAACCTGTTGGA+AGG	+	chr6.1:60543-60562	None:intergenic	30.0%
	AAATCACAATGAATTCGACT+TGG	+	chr6.1:59859-59878	None:intergenic	30.0%
	GAAAGTCTCAAACATGATTT+GGG	+	chr6.1:59529-59548	None:intergenic	30.0%
	GAATAGTTATTTATGCCTCT+TGG	+	chr6.1:59826-59845	None:intergenic	30.0%
	GTCAACATCACATTTCATTA+TGG	+	chr6.1:60333-60352	None:intergenic	30.0%
	TAACAATACCATGCTCAATT+GGG	+	chr6.1:59377-59396	None:intergenic	30.0%
	TGAAAGTCTCAAACATGATT+TGG	+	chr6.1:59530-59549	None:intergenic	30.0%
	TTTCATTATGGAGTTGTAAG+TGG	+	chr6.1:60321-60340	None:intergenic	30.0%
!	ATCTGTTCGTGTAAAAGTAT+AGG	+	chr6.1:59756-59775	None:intergenic	30.0%
!	TTTTCATCATGTAATCAGTC+AGG	+	chr6.1:60043-60062	None:intergenic	30.0%
!!	AATTCGACTTGGAGAATATA+AGG	+	chr6.1:59848-59867	None:intergenic	30.0%
!!	TATTTTTGCAGGTATTGTGT+TGG	-	chr6.1:59926-59945	MS.gene82765:intron	30.0%
	AAAGGACAATGTTACCATAC+AGG	+	chr6.1:60367-60386	None:intergenic	35.0%
	AGATTGAGACTGACAATATG+AGG	-	chr6.1:59700-59719	MS.gene82765:CDS	35.0%
	AGCATGGTATTGTTAGCAAT+TGG	-	chr6.1:59382-59401	MS.gene82765:CDS	35.0%
	ATATGAAGCTATTCACCACA+AGG	+	chr6.1:59162-59181	None:intergenic	35.0%
	ATCCTATGCTTGGGTTTAAT+TGG	-	chr6.1:59638-59657	MS.gene82765:CDS	35.0%
	ATGAAAATTCTGACAGAACG+TGG	-	chr6.1:60056-60075	MS.gene82765:intron	35.0%
	CTAACAATACCATGCTCAAT+TGG	+	chr6.1:59378-59397	None:intergenic	35.0%
	GCATGGTATTGTTAGCAATT+GGG	-	chr6.1:59383-59402	MS.gene82765:CDS	35.0%
	TATGGTAACATTGTCCTTTC+AGG	-	chr6.1:60368-60387	MS.gene82765:CDS	35.0%
	TGAAATGTGATGTTGACATC+AGG	-	chr6.1:60336-60355	MS.gene82765:CDS	35.0%
!	CAATTTTCTCATCAACCAAG+AGG	-	chr6.1:59808-59827	MS.gene82765:CDS	35.0%
!	CACCAACATATGCATCTTTT+TGG	+	chr6.1:59314-59333	None:intergenic	35.0%
!	TCTTGTTTGTGACAATGGAA+CGG	-	chr6.1:59066-59085	MS.gene82765:CDS	35.0%
!!!	ATTTTTTGTTCTCTGCCTTG+TGG	-	chr6.1:59144-59163	MS.gene82765:intron	35.0%
!!!	GAATATACCATTTTTCAGGC+AGG	-	chr6.1:59204-59223	MS.gene82765:intron	35.0%
	AACTTGTACTTTGTGTGAGC+TGG	-	chr6.1:59724-59743	MS.gene82765:CDS	40.0%
	ACCTTGATCTTCATGCTACT+GGG	+	chr6.1:60455-60474	None:intergenic	40.0%
	AGAAGCTCCTCTTAATCCAA+AGG	-	chr6.1:59485-59504	MS.gene82765:CDS	40.0%
	ATTGTGTTGGATTCTGGTGA+TGG	-	chr6.1:59939-59958	MS.gene82765:intron	40.0%
	CACTTCCTATGCACAATTGA+TGG	+	chr6.1:60700-60719	None:intergenic	40.0%
	CATTGCTGATAGAATGAGCA+AGG	-	chr6.1:60412-60431	MS.gene82765:CDS	40.0%
	CTTGTTTGTGACAATGGAAC+GGG	-	chr6.1:59067-59086	MS.gene82765:CDS	40.0%
	GACACGAAGCTCATTATAGA+AGG	+	chr6.1:59436-59455	None:intergenic	40.0%
	GGCCAAAAAGATGCATATGT+TGG	-	chr6.1:59309-59328	MS.gene82765:CDS	40.0%
	GGGATGACATGGAAAAGATT+TGG	-	chr6.1:59403-59422	MS.gene82765:CDS	40.0%
	GTCTCAATCTAAAAGCTCCA+TGG	+	chr6.1:59690-59709	None:intergenic	40.0%
	GTTCCATTGTCACAAACAAG+AGG	+	chr6.1:59067-59086	None:intergenic	40.0%
	TAAGAGAACTGGATGCTCTT+CGG	+	chr6.1:59463-59482	None:intergenic	40.0%
	TAGCTCTTGCTCATAGTCAA+GGG	+	chr6.1:60150-60169	None:intergenic	40.0%
	TGAAATTGTGAGGGACATGA+AGG	-	chr6.1:60106-60125	MS.gene82765:intron	40.0%
	TGCCAATTAAACCCAAGCAT+AGG	+	chr6.1:59643-59662	None:intergenic	40.0%
	TGTTAGCAATTGGGATGACA+TGG	-	chr6.1:59392-59411	MS.gene82765:CDS	40.0%
	TTATACCAACCATCCATGGT+GGG	-	chr6.1:60269-60288	MS.gene82765:CDS	40.0%
!	ACCATAAGCTAGCTTATCCA+TGG	-	chr6.1:59670-59689	MS.gene82765:CDS	40.0%
!	AGAAAGTACAGTGTCTGGAT+TGG	-	chr6.1:60491-60510	MS.gene82765:CDS	40.0%
!	CAACCTCTTGTTTGTGACAA+TGG	-	chr6.1:59061-59080	MS.gene82765:CDS	40.0%
!	TCCATGGATAAGCTAGCTTA+TGG	+	chr6.1:59674-59693	None:intergenic	40.0%
!!	ACTGGTGTTATGGTTGGTAT+GGG	-	chr6.1:59288-59307	MS.gene82765:CDS	40.0%
!!	AGATGCATATGTTGGTGATG+AGG	-	chr6.1:59317-59336	MS.gene82765:CDS	40.0%
!!	TACTGGTGTTATGGTTGGTA+TGG	-	chr6.1:59287-59306	MS.gene82765:CDS	40.0%
	AAGAGAACTGGATGCTCTTC+GGG	+	chr6.1:59462-59481	None:intergenic	45.0%
	AAGAGCTATGAGTTGCCTGA+TGG	-	chr6.1:60200-60219	MS.gene82765:CDS	45.0%
	AAGGCTGAGTATGATGAGTC+TGG	-	chr6.1:60673-60692	MS.gene82765:CDS	45.0%
	AATGGCCACATACATAGCAG+GGG	+	chr6.1:59556-59575	None:intergenic	45.0%
	ACACTGTACTTTCTCTCAGG+CGG	+	chr6.1:60485-60504	None:intergenic	45.0%
	ACATGGTTGTACCTCCTGAA+AGG	+	chr6.1:60385-60404	None:intergenic	45.0%
	ACCAACAATGCTGGGAAACA+CGG	+	chr6.1:59256-59275	None:intergenic	45.0%
	ACCATAACACCAGTATGACG+AGG	+	chr6.1:59282-59301	None:intergenic	45.0%
	ACCCAGTAGCATGAAGATCA+AGG	-	chr6.1:60451-60470	MS.gene82765:CDS	45.0%
	AGAGCTATGAGTTGCCTGAT+GGG	-	chr6.1:60201-60220	MS.gene82765:CDS	45.0%
	AGCAAAGCCTGCCTGAAAAA+TGG	+	chr6.1:59214-59233	None:intergenic	45.0%
	AGCAGAGCGTGAAATTGTGA+GGG	-	chr6.1:60097-60116	MS.gene82765:intron	45.0%
	AGCCAAATCAAGACGAAGGA+TGG	+	chr6.1:60012-60031	None:intergenic	45.0%
	ATCAGCAATGCCAGGAAACA+TGG	+	chr6.1:60402-60421	None:intergenic	45.0%
	CAATCCACATCTGCACACAA+AGG	+	chr6.1:60651-60670	None:intergenic	45.0%
	CAATTGGGTACTTGAGAGTG+AGG	+	chr6.1:59362-59381	None:intergenic	45.0%
	CACATCTGCACACAAAGGAA+AGG	+	chr6.1:60646-60665	None:intergenic	45.0%
	CACCTTGATCTTCATGCTAC+TGG	+	chr6.1:60456-60475	None:intergenic	45.0%
	CAGACACTGTACTTTCTCTC+AGG	+	chr6.1:60488-60507	None:intergenic	45.0%
	CAGTAGCATGAAGATCAAGG+TGG	-	chr6.1:60454-60473	MS.gene82765:CDS	45.0%
	CTCAAGTACCCAATTGAGCA+TGG	-	chr6.1:59366-59385	MS.gene82765:CDS	45.0%
	CTCATTCTATCAGCAATGCC+AGG	+	chr6.1:60410-60429	None:intergenic	45.0%
	CTGGACCATCAATTGTGCAT+AGG	-	chr6.1:60692-60711	MS.gene82765:CDS	45.0%
	CTTATACCAACCATCCATGG+TGG	-	chr6.1:60268-60287	MS.gene82765:CDS	45.0%
	CTTTCCTTTGTGTGCAGATG+TGG	-	chr6.1:60644-60663	MS.gene82765:intron	45.0%
	GAATGGCCACATACATAGCA+GGG	+	chr6.1:59557-59576	None:intergenic	45.0%
	GACATCAGGAAAGACCTGTA+TGG	-	chr6.1:60350-60369	MS.gene82765:CDS	45.0%
	GAGTGAAAGAACAGCCTGAA+TGG	+	chr6.1:59574-59593	None:intergenic	45.0%
	GATGAGGCACAATCTAAACG+TGG	-	chr6.1:59333-59352	MS.gene82765:CDS	45.0%
	GATGGGCAAGTCATCACTAT+TGG	-	chr6.1:60218-60237	MS.gene82765:CDS	45.0%
	GGAGCTTCTGTTAAGAGAAC+TGG	+	chr6.1:59474-59493	None:intergenic	45.0%
	GGTAACATTGTCCTTTCAGG+AGG	-	chr6.1:60371-60390	MS.gene82765:CDS	45.0%
	TGAATGGCCACATACATAGC+AGG	+	chr6.1:59558-59577	None:intergenic	45.0%
	TGCTATGTATGTGGCCATTC+AGG	-	chr6.1:59557-59576	MS.gene82765:CDS	45.0%
	TTGGGTCATCTTCTCACGAT+TGG	+	chr6.1:59511-59530	None:intergenic	45.0%
	TTGTGACAATGGAACGGGAA+TGG	-	chr6.1:59072-59091	MS.gene82765:CDS	45.0%
!	AAGTACAGTGTCTGGATTGG+TGG	-	chr6.1:60494-60513	MS.gene82765:CDS	45.0%
!	ATAGTGATGACTTGCCCATC+AGG	+	chr6.1:60218-60237	None:intergenic	45.0%
!	CTAGCTCTTGCTCATAGTCA+AGG	+	chr6.1:60151-60170	None:intergenic	45.0%
!	CTGAGAGAAAGTACAGTGTC+TGG	-	chr6.1:60486-60505	MS.gene82765:CDS	45.0%
!	GATGGTTGGTATAAGACCTC+TGG	+	chr6.1:60263-60282	None:intergenic	45.0%
!	GCAGGTATTGTGTTGGATTC+TGG	-	chr6.1:59933-59952	MS.gene82765:intron	45.0%
!	GGTCTTATACCAACCATCCA+TGG	-	chr6.1:60265-60284	MS.gene82765:CDS	45.0%
!	TCCTCGTCATACTGGTGTTA+TGG	-	chr6.1:59278-59297	MS.gene82765:CDS	45.0%
!	TGTGCAGATGTGGATTGCAA+AGG	-	chr6.1:60654-60673	MS.gene82765:intron	45.0%
!!	AAACCTGTTGGAAGGTGCTT+AGG	+	chr6.1:60535-60554	None:intergenic	45.0%
!!	AACCTGTTGGAAGGTGCTTA+GGG	+	chr6.1:60534-60553	None:intergenic	45.0%
!!	ATCCTTCGTCTTGATTTGGC+TGG	-	chr6.1:60011-60030	MS.gene82765:intron	45.0%
!!	ATCTTCTCACGATTGGCCTT+TGG	+	chr6.1:59504-59523	None:intergenic	45.0%
!!	CGATTGGCCTTTGGATTAAG+AGG	+	chr6.1:59495-59514	None:intergenic	45.0%
!!	CGTCATACTGGTGTTATGGT+TGG	-	chr6.1:59282-59301	MS.gene82765:CDS	45.0%
!!	CTGGATTGGTGGTTCTATCT+TGG	-	chr6.1:60505-60524	MS.gene82765:CDS	45.0%
!!!	ATTTTTCAGGCAGGCTTTGC+TGG	-	chr6.1:59213-59232	MS.gene82765:intron	45.0%
	AATTTCACGCTCTGCTGAGG+TGG	+	chr6.1:60093-60112	None:intergenic	50.0%
	AGAGAACTGGATGCTCTTCG+GGG	+	chr6.1:59461-59480	None:intergenic	50.0%
	AGGGCATAACCCTCGTAGAT+AGG	+	chr6.1:59981-60000	None:intergenic	50.0%
	ATCCCTAAGCACCTTCCAAC+AGG	-	chr6.1:60529-60548	MS.gene82765:intron	50.0%
	CAATGCCCCTGCTATGTATG+TGG	-	chr6.1:59548-59567	MS.gene82765:CDS	50.0%
	CAATGGAACGGGAATGGTCA+AGG	-	chr6.1:59078-59097	MS.gene82765:CDS	50.0%
	CACAATTTCACGCTCTGCTG+AGG	+	chr6.1:60096-60115	None:intergenic	50.0%
	CACACAGTCCCTATCTACGA+GGG	-	chr6.1:59969-59988	MS.gene82765:intron	50.0%
	CAGCAGAGCGTGAAATTGTG+AGG	-	chr6.1:60096-60115	MS.gene82765:intron	50.0%
	CGCCATCCTTCGTCTTGATT+TGG	-	chr6.1:60007-60026	MS.gene82765:intron	50.0%
	GACCAGCCAAATCAAGACGA+AGG	+	chr6.1:60016-60035	None:intergenic	50.0%
	GAGGGACATGAAGGAAAAGC+TGG	-	chr6.1:60115-60134	MS.gene82765:intron	50.0%
	GGGCATAACCCTCGTAGATA+GGG	+	chr6.1:59980-59999	None:intergenic	50.0%
	GTTCTTTCACTCTACGCCAG+TGG	-	chr6.1:59582-59601	MS.gene82765:CDS	50.0%
!	ATTACCGGTTGTACGACCAC+TGG	+	chr6.1:59601-59620	None:intergenic	50.0%
!	GGAGGTACAACCATGTTTCC+TGG	-	chr6.1:60389-60408	MS.gene82765:CDS	50.0%
!!	CTATTGGCGCTGAGCGTTTT+AGG	-	chr6.1:60234-60253	MS.gene82765:CDS	50.0%
!!	TGAGCGTTTTAGGTGTCCAG+AGG	-	chr6.1:60244-60263	MS.gene82765:CDS	50.0%
	ACGAGGACGACCAACAATGC+TGG	+	chr6.1:59265-59284	None:intergenic	55.0%
	ATCCAAGACCAGCTCTGCAG+TGG	-	chr6.1:60175-60194	MS.gene82765:CDS	55.0%
	CAAGACGAAGGATGGCGTGT+GGG	+	chr6.1:60004-60023	None:intergenic	55.0%
	CCACACAGTCCCTATCTACG+AGG	-	chr6.1:59968-59987	MS.gene82765:intron	55.0%
	CCATTCCCACCATGGATGGT+TGG	+	chr6.1:60277-60296	None:intergenic	55.0%
	CCTCGTAGATAGGGACTGTG+TGG	+	chr6.1:59971-59990	None:intergenic	55.0%
	CGAGGACGACCAACAATGCT+GGG	+	chr6.1:59264-59283	None:intergenic	55.0%
	GAGAACTGGATGCTCTTCGG+GGG	+	chr6.1:59460-59479	None:intergenic	55.0%
	GCCGTGTTTCCCAGCATTGT+TGG	-	chr6.1:59252-59271	MS.gene82765:CDS	55.0%
	GCTTCCATTCCCACCATGGA+TGG	+	chr6.1:60281-60300	None:intergenic	55.0%
	GTTGGTCGTCCTCGTCATAC+TGG	-	chr6.1:59270-59289	MS.gene82765:CDS	55.0%
	TACGCCAGTGGTCGTACAAC+CGG	-	chr6.1:59594-59613	MS.gene82765:CDS	55.0%
	TCAAGACGAAGGATGGCGTG+TGG	+	chr6.1:60005-60024	None:intergenic	55.0%
	TGCAGCTTCCATTCCCACCA+TGG	+	chr6.1:60285-60304	None:intergenic	55.0%
!	ATGGTGGGAATGGAAGCTGC+AGG	-	chr6.1:60284-60303	MS.gene82765:CDS	55.0%
!	CCAACCATCCATGGTGGGAA+TGG	-	chr6.1:60274-60293	MS.gene82765:CDS	55.0%
	ACGAAGGATGGCGTGTGGGA+GGG	+	chr6.1:60000-60019	None:intergenic	60.0%
	ATGCTGGGAAACACGGCACG+CGG	+	chr6.1:59249-59268	None:intergenic	60.0%
	GCTCTTCTCCACTGCAGAGC+TGG	+	chr6.1:60186-60205	None:intergenic	60.0%
!	CTCCACTGCAGAGCTGGTCT+TGG	+	chr6.1:60180-60199	None:intergenic	60.0%
	GACGAAGGATGGCGTGTGGG+AGG	+	chr6.1:60001-60020	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.1	gene	59040	60726	59040	ID=MS.gene82765
chr6.1	mRNA	59040	60726	59040	ID=MS.gene82765.t1;Parent=MS.gene82765
chr6.1	exon	60667	60726	60667	ID=MS.gene82765.t1.exon1;Parent=MS.gene82765.t1
chr6.1	CDS	60667	60726	60667	ID=cds.MS.gene82765.t1;Parent=MS.gene82765.t1
chr6.1	exon	60151	60544	60151	ID=MS.gene82765.t1.exon2;Parent=MS.gene82765.t1
chr6.1	CDS	60151	60544	60151	ID=cds.MS.gene82765.t1;Parent=MS.gene82765.t1
chr6.1	exon	59216	59829	59216	ID=MS.gene82765.t1.exon3;Parent=MS.gene82765.t1
chr6.1	CDS	59216	59829	59216	ID=cds.MS.gene82765.t1;Parent=MS.gene82765.t1
chr6.1	exon	59040	59105	59040	ID=MS.gene82765.t1.exon4;Parent=MS.gene82765.t1
chr6.1	CDS	59040	59105	59040	ID=cds.MS.gene82765.t1;Parent=MS.gene82765.t1

Gene Sequence

>MS.gene82765

ATGGCAGACGCTGAGGATATTCAACCTCTTGTTTGTGACAATGGAACGGGAATGGTCAAGGTACCAGCTATTATAGATCACATTTTCTTCTTTCATTTTCATTTATTTTTTGTTCTCTGCCTTGTGGTGAATAGCTTCATATGACACATTATAGATTAACATTGGAATATACCATTTTTCAGGCAGGCTTTGCTGGAGATGATGCACCGCGTGCCGTGTTTCCCAGCATTGTTGGTCGTCCTCGTCATACTGGTGTTATGGTTGGTATGGGCCAAAAAGATGCATATGTTGGTGATGAGGCACAATCTAAACGTGGTATCCTCACTCTCAAGTACCCAATTGAGCATGGTATTGTTAGCAATTGGGATGACATGGAAAAGATTTGGCATCATACCTTCTATAATGAGCTTCGTGTCGCCCCCGAAGAGCATCCAGTTCTCTTAACAGAAGCTCCTCTTAATCCAAAGGCCAATCGTGAGAAGATGACCCAAATCATGTTTGAGACTTTCAATGCCCCTGCTATGTATGTGGCCATTCAGGCTGTTCTTTCACTCTACGCCAGTGGTCGTACAACCGGTAATCATTTCATGATATTATTATCCTATGCTTGGGTTTAATTGGCACGCTTGTACCATAAGCTAGCTTATCCATGGAGCTTTTAGATTGAGACTGACAATATGAGGCAACTTGTACTTTGTGTGAGCTGGCATATACCTATACTTTTACACGAACAGATCTTTATTTGTCGTAGTAAAGTTTAGAGTTGTTCAATTTTCTCATCAACCAAGAGGCATAAATAACTATTCCTTATATTCTCCAAGTCGAATTCATTGTGATTTATAATTTTTCTCCGGTTTTGTTTTCAATTATGATGATTTATTTTTCTTATTTTTGCAGGTATTGTGTTGGATTCTGGTGATGGTGTCAGCCACACAGTCCCTATCTACGAGGGTTATGCCCTCCCACACGCCATCCTTCGTCTTGATTTGGCTGGTCGTGACCTGACTGATTACATGATGAAAATTCTGACAGAACGTGGTTATTCTTTTACCACCTCAGCAGAGCGTGAAATTGTGAGGGACATGAAGGAAAAGCTGGCTTACATTGCCCTTGACTATGAGCAAGAGCTAGAGACATCCAAGACCAGCTCTGCAGTGGAGAAGAGCTATGAGTTGCCTGATGGGCAAGTCATCACTATTGGCGCTGAGCGTTTTAGGTGTCCAGAGGTCTTATACCAACCATCCATGGTGGGAATGGAAGCTGCAGGAATTCATGAGACCACTTACAACTCCATAATGAAATGTGATGTTGACATCAGGAAAGACCTGTATGGTAACATTGTCCTTTCAGGAGGTACAACCATGTTTCCTGGCATTGCTGATAGAATGAGCAAGGAGATTTCTGCATTAGCACCCAGTAGCATGAAGATCAAGGTGGTAGCACCGCCTGAGAGAAAGTACAGTGTCTGGATTGGTGGTTCTATCTTGGCATCCCTAAGCACCTTCCAACAGGTTTGTTTTTTTATTTGATTCATCTGATTTTCTGAATGTTGCTCGAAGATATATTCATAATCTATGACTGCTAATGAGTTAAATTAAACTTTCCTTTCCTTTGTGTGCAGATGTGGATTGCAAAGGCTGAGTATGATGAGTCTGGACCATCAATTGTGCATAGGAAGTGTTTCTAA

Protein sequence

>MS.gene82765.t1

MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERGYSFTTSAEREIVRDMKEKLAYIALDYEQELETSKTSSAVEKSYELPDGQVITIGAERFRCPEVLYQPSMVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF