Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37274.t1 | XP_013443410.1 | 99.7 | 377 | 1 | 0 | 1 | 377 | 1 | 377 | 1.40E-216 | 761.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37274.t1 | O81221 | 98.1 | 377 | 7 | 0 | 1 | 377 | 1 | 377 | 1.2e-216 | 753.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37274.t1 | B7FIH3 | 99.7 | 377 | 1 | 0 | 1 | 377 | 1 | 377 | 1.0e-216 | 761.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37274.t1 | MTR_0015s0130 | 99.735 | 377 | 1 | 0 | 1 | 377 | 1 | 377 | 0.0 | 782 |
MS.gene37274.t1 | MTR_2g096840 | 98.408 | 377 | 6 | 0 | 1 | 377 | 1 | 377 | 0.0 | 775 |
MS.gene37274.t1 | MTR_7g093260 | 97.082 | 377 | 11 | 0 | 1 | 377 | 1 | 377 | 0.0 | 770 |
MS.gene37274.t1 | MTR_6g004000 | 97.347 | 377 | 10 | 0 | 1 | 377 | 1 | 377 | 0.0 | 769 |
MS.gene37274.t1 | MTR_7g026230 | 97.347 | 377 | 10 | 0 | 1 | 377 | 1 | 377 | 0.0 | 766 |
MS.gene37274.t1 | MTR_3g095530 | 95.491 | 377 | 17 | 0 | 1 | 377 | 1 | 377 | 0.0 | 761 |
MS.gene37274.t1 | MTR_2g008050 | 93.634 | 377 | 24 | 0 | 1 | 377 | 1 | 377 | 0.0 | 749 |
MS.gene37274.t1 | MTR_7g027185 | 43.272 | 379 | 201 | 3 | 10 | 374 | 7 | 385 | 7.16e-120 | 352 |
MS.gene37274.t1 | MTR_7g027185 | 44.507 | 355 | 184 | 2 | 10 | 351 | 7 | 361 | 3.71e-117 | 345 |
MS.gene37274.t1 | MTR_7g027185 | 47.557 | 307 | 159 | 1 | 10 | 314 | 7 | 313 | 1.75e-109 | 323 |
MS.gene37274.t1 | MTR_5g066400 | 38.031 | 447 | 203 | 12 | 1 | 376 | 1 | 444 | 1.52e-93 | 287 |
MS.gene37274.t1 | MTR_8g464900 | 37.269 | 432 | 198 | 11 | 1 | 362 | 1 | 429 | 8.47e-87 | 269 |
MS.gene37274.t1 | MTR_5g066400 | 35.426 | 446 | 188 | 12 | 1 | 376 | 1 | 416 | 1.08e-80 | 253 |
MS.gene37274.t1 | MTR_8g089630 | 34.550 | 411 | 219 | 8 | 10 | 372 | 10 | 418 | 1.17e-71 | 230 |
MS.gene37274.t1 | MTR_5g066400 | 35.000 | 400 | 189 | 11 | 1 | 332 | 1 | 397 | 1.99e-69 | 224 |
MS.gene37274.t1 | MTR_3g030550 | 37.766 | 376 | 208 | 9 | 11 | 377 | 5 | 363 | 4.62e-68 | 219 |
MS.gene37274.t1 | MTR_2g445210 | 28.132 | 423 | 238 | 7 | 8 | 366 | 6 | 426 | 2.85e-55 | 188 |
MS.gene37274.t1 | MTR_8g007440 | 34.470 | 264 | 146 | 6 | 77 | 319 | 9 | 266 | 2.91e-46 | 159 |
MS.gene37274.t1 | MTR_2g445210 | 26.613 | 372 | 207 | 7 | 8 | 315 | 6 | 375 | 2.72e-41 | 149 |
MS.gene37274.t1 | MTR_3g010170 | 30.640 | 297 | 182 | 9 | 91 | 371 | 179 | 467 | 5.10e-40 | 148 |
MS.gene37274.t1 | MTR_8g070520 | 31.399 | 293 | 174 | 10 | 91 | 366 | 187 | 469 | 1.24e-35 | 136 |
MS.gene37274.t1 | MTR_8g070520 | 30.935 | 278 | 166 | 9 | 91 | 352 | 187 | 454 | 2.23e-32 | 127 |
MS.gene37274.t1 | MTR_3g067945 | 29.365 | 252 | 159 | 7 | 9 | 245 | 21 | 268 | 2.95e-22 | 99.0 |
MS.gene37274.t1 | MTR_3g067945 | 33.607 | 122 | 78 | 2 | 250 | 368 | 586 | 707 | 2.13e-15 | 78.2 |
MS.gene37274.t1 | MTR_8g008540 | 70.270 | 37 | 11 | 0 | 340 | 376 | 41 | 77 | 4.15e-13 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37274.t1 | AT3G53750 | 96.552 | 377 | 13 | 0 | 1 | 377 | 1 | 377 | 0.0 | 764 |
MS.gene37274.t1 | AT3G53750 | 96.552 | 377 | 13 | 0 | 1 | 377 | 1 | 377 | 0.0 | 764 |
MS.gene37274.t1 | AT2G37620 | 96.552 | 377 | 13 | 0 | 1 | 377 | 1 | 377 | 0.0 | 764 |
MS.gene37274.t1 | AT2G37620 | 96.552 | 377 | 13 | 0 | 1 | 377 | 1 | 377 | 0.0 | 764 |
MS.gene37274.t1 | AT2G37620 | 96.552 | 377 | 13 | 0 | 1 | 377 | 1 | 377 | 0.0 | 764 |
MS.gene37274.t1 | AT2G37620 | 96.552 | 377 | 13 | 0 | 1 | 377 | 1 | 377 | 0.0 | 764 |
MS.gene37274.t1 | AT3G46520 | 97.082 | 377 | 11 | 0 | 1 | 377 | 1 | 377 | 0.0 | 763 |
MS.gene37274.t1 | AT3G46520 | 97.082 | 377 | 11 | 0 | 1 | 377 | 1 | 377 | 0.0 | 763 |
MS.gene37274.t1 | AT5G09810 | 95.756 | 377 | 16 | 0 | 1 | 377 | 1 | 377 | 0.0 | 763 |
MS.gene37274.t1 | AT3G12110 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
MS.gene37274.t1 | AT5G59370 | 96.817 | 377 | 12 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
MS.gene37274.t1 | AT5G59370 | 96.817 | 377 | 12 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
MS.gene37274.t1 | AT3G18780 | 92.838 | 377 | 27 | 0 | 1 | 377 | 1 | 377 | 0.0 | 746 |
MS.gene37274.t1 | AT3G18780 | 92.838 | 377 | 27 | 0 | 1 | 377 | 1 | 377 | 0.0 | 746 |
MS.gene37274.t1 | AT1G49240 | 92.573 | 377 | 28 | 0 | 1 | 377 | 1 | 377 | 0.0 | 744 |
MS.gene37274.t1 | AT3G18780 | 92.758 | 359 | 26 | 0 | 1 | 359 | 1 | 359 | 0.0 | 705 |
MS.gene37274.t1 | AT2G42100 | 84.783 | 368 | 56 | 0 | 10 | 377 | 11 | 378 | 0.0 | 676 |
MS.gene37274.t1 | AT2G42090 | 70.541 | 370 | 104 | 1 | 7 | 376 | 1 | 365 | 0.0 | 566 |
MS.gene37274.t1 | AT2G42170 | 78.012 | 332 | 70 | 1 | 46 | 377 | 1 | 329 | 0.0 | 558 |
MS.gene37274.t1 | AT2G42170 | 78.012 | 332 | 70 | 1 | 46 | 377 | 1 | 329 | 0.0 | 558 |
MS.gene37274.t1 | AT2G42170 | 77.885 | 312 | 66 | 1 | 46 | 357 | 1 | 309 | 0.0 | 521 |
MS.gene37274.t1 | AT2G42170 | 77.885 | 312 | 66 | 1 | 46 | 357 | 1 | 309 | 0.0 | 521 |
MS.gene37274.t1 | AT2G42170 | 78.319 | 226 | 46 | 1 | 152 | 377 | 9 | 231 | 1.42e-131 | 376 |
MS.gene37274.t1 | AT3G27000 | 44.327 | 379 | 197 | 4 | 10 | 374 | 7 | 385 | 3.43e-122 | 358 |
MS.gene37274.t1 | AT1G18450 | 37.246 | 443 | 208 | 9 | 1 | 376 | 1 | 440 | 2.68e-95 | 291 |
MS.gene37274.t1 | AT1G13180 | 34.615 | 416 | 212 | 11 | 10 | 372 | 9 | 417 | 8.14e-72 | 231 |
MS.gene37274.t1 | AT3G60830 | 37.731 | 379 | 212 | 9 | 7 | 377 | 1 | 363 | 1.85e-67 | 217 |
MS.gene37274.t1 | AT3G33520 | 30.166 | 421 | 236 | 7 | 10 | 377 | 5 | 420 | 4.18e-58 | 195 |
MS.gene37274.t1 | AT5G56180 | 31.690 | 284 | 169 | 9 | 91 | 358 | 50 | 324 | 2.54e-35 | 132 |
MS.gene37274.t1 | AT5G56180 | 31.690 | 284 | 169 | 9 | 91 | 358 | 182 | 456 | 1.54e-34 | 133 |
MS.gene37274.t1 | AT3G12380 | 29.572 | 257 | 158 | 6 | 9 | 245 | 21 | 274 | 3.17e-25 | 107 |
MS.gene37274.t1 | AT3G12380 | 33.793 | 145 | 92 | 2 | 228 | 368 | 572 | 716 | 2.65e-16 | 81.3 |
MS.gene37274.t1 | AT3G12380 | 29.412 | 255 | 155 | 6 | 9 | 245 | 21 | 268 | 1.53e-24 | 105 |
MS.gene37274.t1 | AT3G12380 | 33.793 | 145 | 92 | 2 | 228 | 368 | 566 | 710 | 2.64e-16 | 81.3 |
MS.gene37274.t1 | AT1G73910 | 35.862 | 145 | 74 | 3 | 1 | 129 | 1 | 142 | 2.24e-23 | 95.1 |
MS.gene37274.t1 | AT1G73910 | 35.862 | 145 | 74 | 3 | 1 | 129 | 1 | 142 | 2.24e-23 | 95.1 |
MS.gene37274.t1 | AT5G56180 | 32.673 | 202 | 113 | 8 | 91 | 281 | 182 | 371 | 1.27e-19 | 89.7 |
MS.gene37274.t1 | AT1G73910 | 29.268 | 123 | 71 | 2 | 1 | 107 | 1 | 123 | 2.91e-12 | 64.7 |
Find 107 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAACCTCTTGTTTGTGATAA+TGG | 0.154159 | 1.2:-40041099 | MS.gene37274:CDS |
ATAGGTATTGTTCTTGATTC+TGG | 0.193204 | 1.2:-40039248 | MS.gene37274:intron |
CTGGATTGGAGGCTCCATTT+TGG | 0.220933 | 1.2:-40038676 | MS.gene37274:CDS |
AGCATGGAATTGTTAGTAAC+TGG | 0.268065 | 1.2:-40040327 | MS.gene37274:CDS |
TGTTAGTAACTGGGATGATA+TGG | 0.302766 | 1.2:-40040317 | MS.gene37274:CDS |
GTGATGAAGCTCAATCAAAA+AGG | 0.325898 | 1.2:-40040378 | MS.gene37274:CDS |
GTTCACAGGAAATGCTTCTA+AGG | 0.326765 | 1.2:-40038119 | None:intergenic |
AGAAGAACTGGATGTTCTTC+AGG | 0.338859 | 1.2:+40040250 | None:intergenic |
ACCAAGTAGCATGAAAATTA+AGG | 0.346175 | 1.2:-40038730 | MS.gene37274:CDS |
AACAGCCGAGCTCGTCTTTG+AGG | 0.347903 | 1.2:+40039007 | None:intergenic |
CTAACAATTCCATGCTCAAT+TGG | 0.355777 | 1.2:+40040334 | None:intergenic |
TAATTGCAGGCTGGATTTGC+CGG | 0.363107 | 1.2:-40040496 | MS.gene37274:intron |
TCCACACGCAATCCTGCGTT+TGG | 0.371608 | 1.2:-40039180 | MS.gene37274:CDS |
CGTGGACGACCTACAATACT+AGG | 0.377152 | 1.2:+40040448 | None:intergenic |
GGTGCTGAGGGAAGCCAAAA+TGG | 0.378341 | 1.2:+40038662 | None:intergenic |
CACTGGTGTGATGGTTGGTA+TGG | 0.381213 | 1.2:-40040422 | MS.gene37274:CDS |
CTTGTTTGTGATAATGGAAC+TGG | 0.393561 | 1.2:-40041093 | MS.gene37274:CDS |
AGCTATGTATGTTGCCATTC+AGG | 0.402911 | 1.2:-40040152 | MS.gene37274:CDS |
ATCCTGCGTTTGGATCTTGC+AGG | 0.408141 | 1.2:-40039170 | MS.gene37274:CDS |
CGATTAGCCTTTGGATTAAG+TGG | 0.413728 | 1.2:+40040217 | None:intergenic |
AGGAAGTATAGTGTCTGGAT+TGG | 0.419464 | 1.2:-40038690 | MS.gene37274:CDS |
TATGCCAGTGGCCGTACAAC+TGG | 0.419694 | 1.2:-40040115 | MS.gene37274:intron |
GATGGCTGGAAGAGTACTTC+AGG | 0.422610 | 1.2:+40038921 | None:intergenic |
TGTTCCCCGGCATTGCTGAT+AGG | 0.428746 | 1.2:-40038779 | MS.gene37274:CDS |
CGCCCTTGGTGCATCATCTC+CGG | 0.435198 | 1.2:+40040477 | None:intergenic |
TTCCCTCAGCACCTTCCAAC+AGG | 0.446388 | 1.2:-40038652 | MS.gene37274:intron |
CTCTTCCAGCCATCCATGAT+TGG | 0.448268 | 1.2:-40038912 | MS.gene37274:CDS |
ATACATAGCTGGAGCATTGA+AGG | 0.451630 | 1.2:+40040165 | None:intergenic |
GTCTCTCACGATTTCGCGCT+CGG | 0.452168 | 1.2:+40039082 | None:intergenic |
AAGTATAGTGTCTGGATTGG+AGG | 0.453134 | 1.2:-40038687 | MS.gene37274:CDS |
AGGGCATATCCTTCATAGAT+AGG | 0.454246 | 1.2:+40039203 | None:intergenic |
GATGGACAGGTGATCACAAT+AGG | 0.458268 | 1.2:-40038963 | MS.gene37274:CDS |
AAGGCTGAATATGATGAATC+AGG | 0.458861 | 1.2:-40038152 | MS.gene37274:CDS |
AAGCGAAAGCACGGCCTGAA+TGG | 0.462189 | 1.2:+40040138 | None:intergenic |
ATTGTGATCACCTGTCCATC+AGG | 0.462569 | 1.2:+40038966 | None:intergenic |
CTCATCCTATCAGCAATGCC+GGG | 0.468005 | 1.2:+40038774 | None:intergenic |
GGTGCTTCAGTGAGAAGAAC+TGG | 0.478493 | 1.2:+40040238 | None:intergenic |
CATTTCCTGTGAACAATTGA+AGG | 0.480733 | 1.2:+40038128 | None:intergenic |
TAACAATTCCATGCTCAATT+GGG | 0.481241 | 1.2:+40040335 | None:intergenic |
TTCATAATCAAGAGCAATGT+AGG | 0.483299 | 1.2:+40039043 | None:intergenic |
ATTGTTCTTGATTCTGGAGA+TGG | 0.486571 | 1.2:-40039242 | MS.gene37274:CDS |
GCGGTGTTCCCTAGTATTGT+AGG | 0.487449 | 1.2:-40040457 | MS.gene37274:CDS |
CAGAGAGGAAGTATAGTGTC+TGG | 0.492085 | 1.2:-40038695 | MS.gene37274:CDS |
AACGCAGGATTGCGTGTGGA+AGG | 0.498417 | 1.2:+40039183 | None:intergenic |
AGGAGCTTCCATACCAATCA+TGG | 0.501773 | 1.2:+40038899 | None:intergenic |
TTTACCAGTTGTACGGCCAC+TGG | 0.503989 | 1.2:+40040111 | None:intergenic |
GGGATGATATGGAAAAGATC+TGG | 0.506672 | 1.2:-40040306 | MS.gene37274:CDS |
CTATGAGTTGCCTGATGGAC+AGG | 0.511657 | 1.2:-40038976 | MS.gene37274:CDS |
GCTCATCCTATCAGCAATGC+CGG | 0.518030 | 1.2:+40038773 | None:intergenic |
GATTTCGCGCTCGGCTGTTG+TGG | 0.522921 | 1.2:+40039091 | None:intergenic |
CAGACACTATACTTCCTCTC+TGG | 0.523127 | 1.2:+40038696 | None:intergenic |
CACACAGTTCCTATCTATGA+AGG | 0.525553 | 1.2:-40039212 | MS.gene37274:CDS |
CCATACCAATCATGGATGGC+TGG | 0.531059 | 1.2:+40038907 | None:intergenic |
CCAGCCATCCATGATTGGTA+TGG | 0.540901 | 1.2:-40038907 | MS.gene37274:CDS |
TTCAGGACAACGGAAACGTT+CGG | 0.541873 | 1.2:+40038938 | None:intergenic |
CAGGCCCTTCAATTGTTCAC+AGG | 0.542188 | 1.2:-40038133 | MS.gene37274:CDS |
GTGCTTTCGCTTTATGCCAG+TGG | 0.544365 | 1.2:-40040127 | MS.gene37274:CDS |
ATGAAAATCTTAACCGAGCG+TGG | 0.549893 | 1.2:-40039125 | MS.gene37274:CDS |
ATACCTGTTGGAAGGTGCTG+AGG | 0.550602 | 1.2:+40038649 | None:intergenic |
AAGAATCTTTACCAGTTGTA+CGG | 0.550890 | 1.2:+40040104 | None:intergenic |
GATGGTTGGTATGGGACAAA+AGG | 0.552916 | 1.2:-40040413 | MS.gene37274:CDS |
TGAATGGCAACATACATAGC+TGG | 0.554069 | 1.2:+40040154 | None:intergenic |
ATACTAGGGAACACCGCCCT+TGG | 0.561168 | 1.2:+40040463 | None:intergenic |
TATGTTGTTTCATGTATACC+AGG | 0.569084 | 1.2:+40038879 | None:intergenic |
CTAAAGTACCCAATTGAGCA+TGG | 0.570119 | 1.2:-40040343 | MS.gene37274:CDS |
TCCACGCCACACTGGTGTGA+TGG | 0.574722 | 1.2:-40040431 | MS.gene37274:CDS |
ATGATTGGTATGGAAGCTCC+TGG | 0.576789 | 1.2:-40038897 | MS.gene37274:CDS |
AGAAACCTCAAAGACGAGCT+CGG | 0.577050 | 1.2:-40039012 | MS.gene37274:CDS |
ACGCAGGATTGCGTGTGGAA+GGG | 0.581046 | 1.2:+40039184 | None:intergenic |
GATATTAGAAAAGATCTCTA+CGG | 0.585990 | 1.2:-40038831 | MS.gene37274:CDS |
CGCCACACTGGTGTGATGGT+TGG | 0.586183 | 1.2:-40040427 | MS.gene37274:CDS |
GAGCAAGGAGATCACAGCAT+TGG | 0.587533 | 1.2:-40038754 | MS.gene37274:CDS |
TACCTGTTGGAAGGTGCTGA+GGG | 0.587542 | 1.2:+40038650 | None:intergenic |
ACTGGCATAAAGCGAAAGCA+CGG | 0.589673 | 1.2:+40040129 | None:intergenic |
ACCATCACACCAGTGTGGCG+TGG | 0.593745 | 1.2:+40040430 | None:intergenic |
GTTCCATTATCACAAACAAG+AGG | 0.600317 | 1.2:+40041096 | None:intergenic |
TGCCGGAGATGATGCACCAA+GGG | 0.600516 | 1.2:-40040479 | MS.gene37274:CDS |
AAGAGCTATGAGTTGCCTGA+TGG | 0.602442 | 1.2:-40038981 | MS.gene37274:CDS |
ACACTATACTTCCTCTCTGG+TGG | 0.604108 | 1.2:+40038699 | None:intergenic |
ATTTCCTGTGAACAATTGAA+GGG | 0.604151 | 1.2:+40038129 | None:intergenic |
TAATGGAACTGGAATGGTCA+AGG | 0.604703 | 1.2:-40041082 | MS.gene37274:intron |
GGTGGTACGACTATGTTCCC+CGG | 0.621683 | 1.2:-40038792 | MS.gene37274:CDS |
GGACAAAAGGATGCATATGT+TGG | 0.623959 | 1.2:-40040400 | MS.gene37274:CDS |
TTGTGATAATGGAACTGGAA+TGG | 0.628921 | 1.2:-40041088 | MS.gene37274:CDS |
CGGAGATGATGCACCAAGGG+CGG | 0.631181 | 1.2:-40040476 | MS.gene37274:CDS |
GCATGGAATTGTTAGTAACT+GGG | 0.633326 | 1.2:-40040326 | MS.gene37274:CDS |
CGAAATCGTGAGAGACGTGA+AGG | 0.635127 | 1.2:-40039075 | MS.gene37274:CDS |
GCTTCCATACCAATCATGGA+TGG | 0.638459 | 1.2:+40038903 | None:intergenic |
TCCAAACGCAGGATTGCGTG+TGG | 0.640726 | 1.2:+40039179 | None:intergenic |
ACTGGTGTGATGGTTGGTAT+GGG | 0.640914 | 1.2:-40040421 | MS.gene37274:CDS |
GGTGAAAGAGTATCCACGCT+CGG | 0.643494 | 1.2:+40039112 | None:intergenic |
TGAAGCACCACTTAATCCAA+AGG | 0.643775 | 1.2:-40040224 | MS.gene37274:CDS |
CATTGCTGATAGGATGAGCA+AGG | 0.644331 | 1.2:-40038769 | MS.gene37274:CDS |
TACGGAAACATCGTATTGAG+TGG | 0.646061 | 1.2:-40038813 | MS.gene37274:CDS |
CGTGCACTATACCTGTTGGA+AGG | 0.652892 | 1.2:+40038641 | None:intergenic |
AAGTAGCATGAAAATTAAGG+TGG | 0.656638 | 1.2:-40038727 | MS.gene37274:CDS |
GTGGACGACCTACAATACTA+GGG | 0.661189 | 1.2:+40040449 | None:intergenic |
TTGCCGGAGATGATGCACCA+AGG | 0.662970 | 1.2:-40040480 | MS.gene37274:CDS |
AATGCAGATGTGGATTGCAA+AGG | 0.677558 | 1.2:-40038171 | MS.gene37274:intron |
TCATCCTATCAGCAATGCCG+GGG | 0.683199 | 1.2:+40038775 | None:intergenic |
GTAGGTCGTCCACGCCACAC+TGG | 0.686011 | 1.2:-40040439 | MS.gene37274:CDS |
GACCTGCAAGATCCAAACGC+AGG | 0.690015 | 1.2:+40039168 | None:intergenic |
GGAAACATCGTATTGAGTGG+TGG | 0.698607 | 1.2:-40038810 | MS.gene37274:CDS |
GGAAGAGTACTTCAGGACAA+CGG | 0.707065 | 1.2:+40038928 | None:intergenic |
AGGTGGTTGCACCACCAGAG+AGG | 0.708305 | 1.2:-40038710 | MS.gene37274:CDS |
CTTCATAGATAGGAACTGTG+TGG | 0.711555 | 1.2:+40039213 | None:intergenic |
TACCAACCATCACACCAGTG+TGG | 0.726907 | 1.2:+40040425 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGAAATTGAATGAAAAATA+CGG | + | chr1.2:40039716-40039735 | None:intergenic | 15.0% |
!!! | ATATATTTGAAATGATAGAA+AGG | - | chr1.2:40039478-40039497 | MS.gene37274:intron | 15.0% |
!!! | TTATTTTCCTTTCATTTTAA+AGG | + | chr1.2:40040654-40040673 | None:intergenic | 15.0% |
!!! | TTTTATAATGTTTTAAATCG+TGG | + | chr1.2:40038413-40038432 | None:intergenic | 15.0% |
!! | AAAATTACAAAACCATTGTT+TGG | + | chr1.2:40039854-40039873 | None:intergenic | 20.0% |
!! | AAATTACAAAACCATTGTTT+GGG | + | chr1.2:40039853-40039872 | None:intergenic | 20.0% |
!! | ATATCTTTACAATTCTCAAA+AGG | + | chr1.2:40039180-40039199 | None:intergenic | 20.0% |
!! | TAATGAGTTAGATAGAAATA+TGG | - | chr1.2:40038459-40038478 | MS.gene37274:intron | 20.0% |
!! | TCAAATGTTAGAAAATGAAA+TGG | + | chr1.2:40039880-40039899 | None:intergenic | 20.0% |
!!! | AAAGTTTTCATTACAGTTTT+TGG | + | chr1.2:40039825-40039844 | None:intergenic | 20.0% |
!!! | TTAAAATACCCTTTTTAATG+TGG | - | chr1.2:40040979-40040998 | MS.gene37274:intron | 20.0% |
! | AAATTCTAATGAAATACGAG+TGG | + | chr1.2:40039350-40039369 | None:intergenic | 25.0% |
! | AACCAAAATGTGTTAAATTG+TGG | + | chr1.2:40038675-40038694 | None:intergenic | 25.0% |
! | AACTTTAAATACCCAAACAA+TGG | - | chr1.2:40039839-40039858 | MS.gene37274:intron | 25.0% |
! | AATTCTAATGAAATACGAGT+GGG | + | chr1.2:40039349-40039368 | None:intergenic | 25.0% |
! | AGATGATCTACAAATGAATA+TGG | - | chr1.2:40039372-40039391 | MS.gene37274:intron | 25.0% |
! | CAATTGTATAACACATATCA+AGG | + | chr1.2:40038592-40038611 | None:intergenic | 25.0% |
! | CTAATCAAATAAGATCAACA+AGG | + | chr1.2:40038200-40038219 | None:intergenic | 25.0% |
! | CTCTTAAACCACATTAAAAA+GGG | + | chr1.2:40040990-40041009 | None:intergenic | 25.0% |
! | GAAAACATATCATCAATACA+TGG | + | chr1.2:40041044-40041063 | None:intergenic | 25.0% |
! | GAAAGGAAAATAATGCATAA+AGG | - | chr1.2:40040661-40040680 | MS.gene37274:intron | 25.0% |
! | GATATTAGAAAAGATCTCTA+CGG | - | chr1.2:40040410-40040429 | MS.gene37274:CDS | 25.0% |
! | GTTTATATGAGCTTATCTAT+AGG | - | chr1.2:40040722-40040741 | MS.gene37274:intron | 25.0% |
! | TGTTTATACATAGCACATAT+AGG | - | chr1.2:40040904-40040923 | MS.gene37274:intron | 25.0% |
! | TTGTAGAATTGACATTGAAA+TGG | - | chr1.2:40039944-40039963 | MS.gene37274:intron | 25.0% |
!! | CGTTGTTTATATCTTGTTAT+AGG | - | chr1.2:40039975-40039994 | MS.gene37274:intron | 25.0% |
!! | CTTGTTGATCTTATTTGATT+AGG | - | chr1.2:40038198-40038217 | MS.gene37274:intron | 25.0% |
!! | GATCTTATTTGATTAGGTAA+AGG | - | chr1.2:40038204-40038223 | MS.gene37274:intron | 25.0% |
!! | GATGTGTTTTATATAATTGC+AGG | - | chr1.2:40038732-40038751 | MS.gene37274:CDS | 25.0% |
!! | TAATAGTCAATAAGCTTGTT+TGG | - | chr1.2:40040695-40040714 | MS.gene37274:intron | 25.0% |
!! | TACCACAATTTAACACATTT+TGG | - | chr1.2:40038670-40038689 | MS.gene37274:CDS | 25.0% |
!!! | ATAGAGACCTTTAAAATGAA+AGG | - | chr1.2:40040644-40040663 | MS.gene37274:intron | 25.0% |
!!! | GGGTATTTTAAACAAATGTA+TGG | + | chr1.2:40040970-40040989 | None:intergenic | 25.0% |
!!! | TTTTTATCGAAGTACTTGTA+TGG | + | chr1.2:40039277-40039296 | None:intergenic | 25.0% |
!!! | TTTTTGGTAATTTGACAGAA+TGG | + | chr1.2:40039809-40039828 | None:intergenic | 25.0% |
AAGAATCTTTACCAGTTGTA+CGG | + | chr1.2:40039140-40039159 | None:intergenic | 30.0% | |
AAGTAGCATGAAAATTAAGG+TGG | - | chr1.2:40040514-40040533 | MS.gene37274:intron | 30.0% | |
ACCAAGTAGCATGAAAATTA+AGG | - | chr1.2:40040511-40040530 | MS.gene37274:intron | 30.0% | |
AGTGTTTCATGAATGATTTG+AGG | - | chr1.2:40039455-40039474 | MS.gene37274:intron | 30.0% | |
ATTTCCTGTGAACAATTGAA+GGG | + | chr1.2:40041115-40041134 | None:intergenic | 30.0% | |
CCTCTTAAACCACATTAAAA+AGG | + | chr1.2:40040991-40041010 | None:intergenic | 30.0% | |
GATAAGCACTTATGCTATAA+GGG | - | chr1.2:40040926-40040945 | MS.gene37274:intron | 30.0% | |
TAACAATTCCATGCTCAATT+GGG | + | chr1.2:40038909-40038928 | None:intergenic | 30.0% | |
TCAAATAAGATCAACAAGGT+TGG | + | chr1.2:40038196-40038215 | None:intergenic | 30.0% | |
TCTTGTAATCTAGTAGTACA+TGG | - | chr1.2:40038566-40038585 | MS.gene37274:intron | 30.0% | |
TGATGAAGCTCAATCAAAAA+GGG | - | chr1.2:40038864-40038883 | MS.gene37274:CDS | 30.0% | |
TGGCTTATGATATAACATCA+TGG | - | chr1.2:40038479-40038498 | MS.gene37274:intron | 30.0% | |
TGTATGACAGCATCAAATAT+TGG | + | chr1.2:40039305-40039324 | None:intergenic | 30.0% | |
TTCATAATCAAGAGCAATGT+AGG | + | chr1.2:40040201-40040220 | None:intergenic | 30.0% | |
! | ACCTTAATTTTCATGCTACT+TGG | + | chr1.2:40040515-40040534 | None:intergenic | 30.0% |
! | ATAGGTATTGTTCTTGATTC+TGG | - | chr1.2:40039993-40040012 | MS.gene37274:intron | 30.0% |
! | CCTTTTTAATGTGGTTTAAG+AGG | - | chr1.2:40040988-40041007 | MS.gene37274:intron | 30.0% |
! | TGTTTTATATAATTGCAGGC+TGG | - | chr1.2:40038736-40038755 | MS.gene37274:CDS | 30.0% |
! | TTTCTTTTCTAATGCAGATG+TGG | - | chr1.2:40041060-40041079 | MS.gene37274:intron | 30.0% |
! | TTTTGTAATCAAGCACTACT+TGG | - | chr1.2:40038705-40038724 | MS.gene37274:CDS | 30.0% |
!! | AGGTAAAGGTTTTTCGAAAA+AGG | - | chr1.2:40038218-40038237 | MS.gene37274:intron | 30.0% |
!! | TATGTTGTTTCATGTATACC+AGG | + | chr1.2:40040365-40040384 | None:intergenic | 30.0% |
AAGGCTGAATATGATGAATC+AGG | - | chr1.2:40041089-40041108 | MS.gene37274:CDS | 35.0% | |
AGCATGGAATTGTTAGTAAC+TGG | - | chr1.2:40038914-40038933 | MS.gene37274:CDS | 35.0% | |
ATAAGATCAACAAGGTTGGA+TGG | + | chr1.2:40038192-40038211 | None:intergenic | 35.0% | |
CAATATGTGTTCATGGATGA+AGG | - | chr1.2:40039760-40039779 | MS.gene37274:intron | 35.0% | |
CATTTCCTGTGAACAATTGA+AGG | + | chr1.2:40041116-40041135 | None:intergenic | 35.0% | |
CTAACAATTCCATGCTCAAT+TGG | + | chr1.2:40038910-40038929 | None:intergenic | 35.0% | |
GATGAAGCTCAATCAAAAAG+GGG | - | chr1.2:40038865-40038884 | MS.gene37274:CDS | 35.0% | |
GCATGGAATTGTTAGTAACT+GGG | - | chr1.2:40038915-40038934 | MS.gene37274:CDS | 35.0% | |
GGATAAGCACTTATGCTATA+AGG | - | chr1.2:40040925-40040944 | MS.gene37274:intron | 35.0% | |
GGTGAAACTGACCTATAATT+CGG | - | chr1.2:40039781-40039800 | MS.gene37274:intron | 35.0% | |
GTGATGAAGCTCAATCAAAA+AGG | - | chr1.2:40038863-40038882 | MS.gene37274:CDS | 35.0% | |
GTTCCATTATCACAAACAAG+AGG | + | chr1.2:40038148-40038167 | None:intergenic | 35.0% | |
TGTTAGTAACTGGGATGATA+TGG | - | chr1.2:40038924-40038943 | MS.gene37274:CDS | 35.0% | |
! | ATATGGATTGCACAACTTAC+AGG | - | chr1.2:40039389-40039408 | MS.gene37274:intron | 35.0% |
! | ATTGTTCTTGATTCTGGAGA+TGG | - | chr1.2:40039999-40040018 | MS.gene37274:intron | 35.0% |
! | CAACCTCTTGTTTGTGATAA+TGG | - | chr1.2:40038142-40038161 | MS.gene37274:CDS | 35.0% |
! | CTCGGTTAAGATTTTCATGA+GGG | + | chr1.2:40040114-40040133 | None:intergenic | 35.0% |
!! | CTTGTTTGTGATAATGGAAC+TGG | - | chr1.2:40038148-40038167 | MS.gene37274:CDS | 35.0% |
!! | TTGTGATAATGGAACTGGAA+TGG | - | chr1.2:40038153-40038172 | MS.gene37274:CDS | 35.0% |
!!! | ATTTTCTCACGATTAGCCTT+TGG | + | chr1.2:40039036-40039055 | None:intergenic | 35.0% |
AGAAGAACTGGATGTTCTTC+AGG | + | chr1.2:40038994-40039013 | None:intergenic | 40.0% | |
AGCTATGTATGTTGCCATTC+AGG | - | chr1.2:40039089-40039108 | MS.gene37274:CDS | 40.0% | |
AGGGCATATCCTTCATAGAT+AGG | + | chr1.2:40040041-40040060 | None:intergenic | 40.0% | |
ATGAAAATCTTAACCGAGCG+TGG | - | chr1.2:40040116-40040135 | MS.gene37274:CDS | 40.0% | |
ATTCAAGACCCTGGATCATT+AGG | - | chr1.2:40039216-40039235 | MS.gene37274:CDS | 40.0% | |
CACACAGTTCCTATCTATGA+AGG | - | chr1.2:40040029-40040048 | MS.gene37274:intron | 40.0% | |
CACTGTGTCAATGTCATATG+TGG | + | chr1.2:40039572-40039591 | None:intergenic | 40.0% | |
CATCCATGAACACATATTGC+AGG | + | chr1.2:40039759-40039778 | None:intergenic | 40.0% | |
CTTCATAGATAGGAACTGTG+TGG | + | chr1.2:40040031-40040050 | None:intergenic | 40.0% | |
CTTCCTGCAATATGTGTTCA+TGG | - | chr1.2:40039753-40039772 | MS.gene37274:intron | 40.0% | |
GAAATATGCAGCACTTGGAT+CGG | - | chr1.2:40039538-40039557 | MS.gene37274:intron | 40.0% | |
GGAATGCAGTGAAGTGAAAT+AGG | - | chr1.2:40039499-40039518 | MS.gene37274:intron | 40.0% | |
GGACAAAAGGATGCATATGT+TGG | - | chr1.2:40038841-40038860 | MS.gene37274:CDS | 40.0% | |
GGGATGATATGGAAAAGATC+TGG | - | chr1.2:40038935-40038954 | MS.gene37274:CDS | 40.0% | |
TAATGGAACTGGAATGGTCA+AGG | - | chr1.2:40038159-40038178 | MS.gene37274:CDS | 40.0% | |
TACGGAAACATCGTATTGAG+TGG | - | chr1.2:40040428-40040447 | MS.gene37274:CDS | 40.0% | |
TGAATGGCAACATACATAGC+TGG | + | chr1.2:40039090-40039109 | None:intergenic | 40.0% | |
TGTTCGAAATATGCAGCACT+TGG | - | chr1.2:40039533-40039552 | MS.gene37274:intron | 40.0% | |
TTCAAGACCCTGGATCATTA+GGG | - | chr1.2:40039217-40039236 | MS.gene37274:CDS | 40.0% | |
! | AAGTATAGTGTCTGGATTGG+AGG | - | chr1.2:40040554-40040573 | MS.gene37274:intron | 40.0% |
! | AATGCAGATGTGGATTGCAA+AGG | - | chr1.2:40041070-40041089 | MS.gene37274:intron | 40.0% |
! | ACAGAATGGTGCCGAATTAT+AGG | + | chr1.2:40039795-40039814 | None:intergenic | 40.0% |
! | AGGAAGTATAGTGTCTGGAT+TGG | - | chr1.2:40040551-40040570 | MS.gene37274:intron | 40.0% |
! | CTAAAGTACCCAATTGAGCA+TGG | - | chr1.2:40038898-40038917 | MS.gene37274:CDS | 40.0% |
! | GCTCGGTTAAGATTTTCATG+AGG | + | chr1.2:40040115-40040134 | None:intergenic | 40.0% |
! | TGAAGCACCACTTAATCCAA+AGG | - | chr1.2:40039017-40039036 | MS.gene37274:CDS | 40.0% |
!! | ATACATAGCTGGAGCATTGA+AGG | + | chr1.2:40039079-40039098 | None:intergenic | 40.0% |
!! | CGATTAGCCTTTGGATTAAG+TGG | + | chr1.2:40039027-40039046 | None:intergenic | 40.0% |
AAGAGCTATGAGTTGCCTGA+TGG | - | chr1.2:40040260-40040279 | MS.gene37274:CDS | 45.0% | |
AAGTCGTGCACTATACCTGT+TGG | + | chr1.2:40040607-40040626 | None:intergenic | 45.0% | |
AAGTGACGTATTCAAGACCC+TGG | - | chr1.2:40039207-40039226 | MS.gene37274:CDS | 45.0% | |
ACACTATACTTCCTCTCTGG+TGG | + | chr1.2:40040545-40040564 | None:intergenic | 45.0% | |
ACTGGCATAAAGCGAAAGCA+CGG | + | chr1.2:40039115-40039134 | None:intergenic | 45.0% | |
AGAAACCTCAAAGACGAGCT+CGG | - | chr1.2:40040229-40040248 | MS.gene37274:CDS | 45.0% | |
AGGAGCTTCCATACCAATCA+TGG | + | chr1.2:40040345-40040364 | None:intergenic | 45.0% | |
ATACGGACACATCAGATCGA+CGG | + | chr1.2:40039699-40039718 | None:intergenic | 45.0% | |
ATACTATGATGTCGCTGTCG+CGG | + | chr1.2:40038297-40038316 | None:intergenic | 45.0% | |
ATCACAAGTGACCGCAATTC+TGG | - | chr1.2:40038335-40038354 | MS.gene37274:intron | 45.0% | |
ATGATTGGTATGGAAGCTCC+TGG | - | chr1.2:40040344-40040363 | MS.gene37274:CDS | 45.0% | |
ATTGTGATCACCTGTCCATC+AGG | + | chr1.2:40040278-40040297 | None:intergenic | 45.0% | |
CAGACACTATACTTCCTCTC+TGG | + | chr1.2:40040548-40040567 | None:intergenic | 45.0% | |
CATTGCTGATAGGATGAGCA+AGG | - | chr1.2:40040472-40040491 | MS.gene37274:CDS | 45.0% | |
GAACTGGAATGGTCAAGGTA+TGG | - | chr1.2:40038164-40038183 | MS.gene37274:CDS | 45.0% | |
GATGGACAGGTGATCACAAT+AGG | - | chr1.2:40040278-40040297 | MS.gene37274:CDS | 45.0% | |
GCTTCCATACCAATCATGGA+TGG | + | chr1.2:40040341-40040360 | None:intergenic | 45.0% | |
GGAAACATCGTATTGAGTGG+TGG | - | chr1.2:40040431-40040450 | MS.gene37274:CDS | 45.0% | |
GTGGACGACCTACAATACTA+GGG | + | chr1.2:40038795-40038814 | None:intergenic | 45.0% | |
TAATTGCAGGCTGGATTTGC+CGG | - | chr1.2:40038745-40038764 | MS.gene37274:CDS | 45.0% | |
TTCAGGACAACGGAAACGTT+CGG | + | chr1.2:40040306-40040325 | None:intergenic | 45.0% | |
TTCATGTAGCTAACCCCACT+TGG | - | chr1.2:40038512-40038531 | MS.gene37274:intron | 45.0% | |
! | ACTGGTGTGATGGTTGGTAT+GGG | - | chr1.2:40038820-40038839 | MS.gene37274:CDS | 45.0% |
! | CAGAGAGGAAGTATAGTGTC+TGG | - | chr1.2:40040546-40040565 | MS.gene37274:intron | 45.0% |
! | GATGGTTGGTATGGGACAAA+AGG | - | chr1.2:40038828-40038847 | MS.gene37274:CDS | 45.0% |
!! | GGAAGAGTACTTCAGGACAA+CGG | + | chr1.2:40040316-40040335 | None:intergenic | 45.0% |
!!! | TTTATTTCTTAAATTATTAT+CGG | + | chr1.2:40039604-40039623 | None:intergenic | 5.0% |
AATTGCGATCCTTGCGAGTC+TGG | - | chr1.2:40038628-40038647 | MS.gene37274:intron | 50.0% | |
AGACCCTGGATCATTAGGGT+CGG | - | chr1.2:40039221-40039240 | MS.gene37274:CDS | 50.0% | |
AGCTGATGCAGCCAGAATTG+CGG | + | chr1.2:40038349-40038368 | None:intergenic | 50.0% | |
AGTCCGACCCTAATGATCCA+GGG | + | chr1.2:40039227-40039246 | None:intergenic | 50.0% | |
ATCCTGCGTTTGGATCTTGC+AGG | - | chr1.2:40040071-40040090 | MS.gene37274:intron | 50.0% | |
ATGTAGCTAACCCCACTTGG+TGG | - | chr1.2:40038515-40038534 | MS.gene37274:intron | 50.0% | |
ATTGCGATCCTTGCGAGTCT+GGG | - | chr1.2:40038629-40038648 | MS.gene37274:intron | 50.0% | |
CAGGCCCTTCAATTGTTCAC+AGG | - | chr1.2:40041108-40041127 | MS.gene37274:CDS | 50.0% | |
CCAGCCATCCATGATTGGTA+TGG | - | chr1.2:40040334-40040353 | MS.gene37274:CDS | 50.0% | |
CCATACCAATCATGGATGGC+TGG | + | chr1.2:40040337-40040356 | None:intergenic | 50.0% | |
CGAAATCGTGAGAGACGTGA+AGG | - | chr1.2:40040166-40040185 | MS.gene37274:CDS | 50.0% | |
CGTGCACTATACCTGTTGGA+AGG | + | chr1.2:40040603-40040622 | None:intergenic | 50.0% | |
CGTGGACGACCTACAATACT+AGG | + | chr1.2:40038796-40038815 | None:intergenic | 50.0% | |
CTCATCCTATCAGCAATGCC+GGG | + | chr1.2:40040470-40040489 | None:intergenic | 50.0% | |
CTCTTCCAGCCATCCATGAT+TGG | - | chr1.2:40040329-40040348 | MS.gene37274:CDS | 50.0% | |
GAGCAAGGAGATCACAGCAT+TGG | - | chr1.2:40040487-40040506 | MS.gene37274:CDS | 50.0% | |
GAGTCTGGGGAATTGGAACA+CGG | - | chr1.2:40038643-40038662 | MS.gene37274:intron | 50.0% | |
GCGGTGTTCCCTAGTATTGT+AGG | - | chr1.2:40038784-40038803 | MS.gene37274:CDS | 50.0% | |
GCTCATCCTATCAGCAATGC+CGG | + | chr1.2:40040471-40040490 | None:intergenic | 50.0% | |
GGTGCTTCAGTGAGAAGAAC+TGG | + | chr1.2:40039006-40039025 | None:intergenic | 50.0% | |
GTGCTTTCGCTTTATGCCAG+TGG | - | chr1.2:40039114-40039133 | MS.gene37274:CDS | 50.0% | |
TACCAACCATCACACCAGTG+TGG | + | chr1.2:40038819-40038838 | None:intergenic | 50.0% | |
TAGTCCGACCCTAATGATCC+AGG | + | chr1.2:40039228-40039247 | None:intergenic | 50.0% | |
TCATCCTATCAGCAATGCCG+GGG | + | chr1.2:40040469-40040488 | None:intergenic | 50.0% | |
TGTAGCTAACCCCACTTGGT+GGG | - | chr1.2:40038516-40038535 | MS.gene37274:intron | 50.0% | |
TTTACCAGTTGTACGGCCAC+TGG | + | chr1.2:40039133-40039152 | None:intergenic | 50.0% | |
! | AAGCCTTATCCCACCAAGTG+GGG | + | chr1.2:40038528-40038547 | None:intergenic | 50.0% |
! | CAAGCCTTATCCCACCAAGT+GGG | + | chr1.2:40038529-40038548 | None:intergenic | 50.0% |
! | CACTGGTGTGATGGTTGGTA+TGG | - | chr1.2:40038819-40038838 | MS.gene37274:CDS | 50.0% |
! | CTATGAGTTGCCTGATGGAC+AGG | - | chr1.2:40040265-40040284 | MS.gene37274:CDS | 50.0% |
! | TAACCCCACTTGGTGGGATA+AGG | - | chr1.2:40038522-40038541 | MS.gene37274:intron | 50.0% |
! | TCAAGCCTTATCCCACCAAG+TGG | + | chr1.2:40038530-40038549 | None:intergenic | 50.0% |
!! | ATACCTGTTGGAAGGTGCTG+AGG | + | chr1.2:40040595-40040614 | None:intergenic | 50.0% |
!! | CTGGATTGGAGGCTCCATTT+TGG | - | chr1.2:40040565-40040584 | MS.gene37274:intron | 50.0% |
!! | GATGGCTGGAAGAGTACTTC+AGG | + | chr1.2:40040323-40040342 | None:intergenic | 50.0% |
!! | GGTGAAAGAGTATCCACGCT+CGG | + | chr1.2:40040132-40040151 | None:intergenic | 50.0% |
!! | TACCTGTTGGAAGGTGCTGA+GGG | + | chr1.2:40040594-40040613 | None:intergenic | 50.0% |
AACAGCCGAGCTCGTCTTTG+AGG | + | chr1.2:40040237-40040256 | None:intergenic | 55.0% | |
AACGCAGGATTGCGTGTGGA+AGG | + | chr1.2:40040061-40040080 | None:intergenic | 55.0% | |
ACGCAGGATTGCGTGTGGAA+GGG | + | chr1.2:40040060-40040079 | None:intergenic | 55.0% | |
ATACTAGGGAACACCGCCCT+TGG | + | chr1.2:40038781-40038800 | None:intergenic | 55.0% | |
GACCTGCAAGATCCAAACGC+AGG | + | chr1.2:40040076-40040095 | None:intergenic | 55.0% | |
GCTGCATTTGACTGCGAGTC+TGG | - | chr1.2:40038366-40038385 | MS.gene37274:intron | 55.0% | |
GGTGGTACGACTATGTTCCC+CGG | - | chr1.2:40040449-40040468 | MS.gene37274:CDS | 55.0% | |
GTCTCTCACGATTTCGCGCT+CGG | + | chr1.2:40040162-40040181 | None:intergenic | 55.0% | |
TATGCCAGTGGCCGTACAAC+TGG | - | chr1.2:40039126-40039145 | MS.gene37274:CDS | 55.0% | |
TCCAAACGCAGGATTGCGTG+TGG | + | chr1.2:40040065-40040084 | None:intergenic | 55.0% | |
TCCAATTCCCCAGACTCGCA+AGG | + | chr1.2:40038640-40038659 | None:intergenic | 55.0% | |
TCCACACGCAATCCTGCGTT+TGG | - | chr1.2:40040061-40040080 | MS.gene37274:intron | 55.0% | |
TCCTTGCGAGTCTGGGGAAT+TGG | - | chr1.2:40038636-40038655 | MS.gene37274:intron | 55.0% | |
TGCCGGAGATGATGCACCAA+GGG | - | chr1.2:40038762-40038781 | MS.gene37274:CDS | 55.0% | |
TGTTCCCCGGCATTGCTGAT+AGG | - | chr1.2:40040462-40040481 | MS.gene37274:CDS | 55.0% | |
TTCCCTCAGCACCTTCCAAC+AGG | - | chr1.2:40040589-40040608 | MS.gene37274:intron | 55.0% | |
TTGCCGGAGATGATGCACCA+AGG | - | chr1.2:40038761-40038780 | MS.gene37274:CDS | 55.0% | |
TTGCGATCCTTGCGAGTCTG+GGG | - | chr1.2:40038630-40038649 | MS.gene37274:intron | 55.0% | |
! | AAGCGAAAGCACGGCCTGAA+TGG | + | chr1.2:40039106-40039125 | None:intergenic | 55.0% |
! | GGTGCTGAGGGAAGCCAAAA+TGG | + | chr1.2:40040582-40040601 | None:intergenic | 55.0% |
ACCATCACACCAGTGTGGCG+TGG | + | chr1.2:40038814-40038833 | None:intergenic | 60.0% | |
AGGTGGTTGCACCACCAGAG+AGG | - | chr1.2:40040531-40040550 | MS.gene37274:intron | 60.0% | |
CGCCACACTGGTGTGATGGT+TGG | - | chr1.2:40038814-40038833 | MS.gene37274:CDS | 60.0% | |
CGGAGATGATGCACCAAGGG+CGG | - | chr1.2:40038765-40038784 | MS.gene37274:CDS | 60.0% | |
GATTTCGCGCTCGGCTGTTG+TGG | + | chr1.2:40040153-40040172 | None:intergenic | 60.0% | |
TCCACGCCACACTGGTGTGA+TGG | - | chr1.2:40038810-40038829 | MS.gene37274:CDS | 60.0% | |
TCGTGGCAGCAGTCATGTCG+CGG | + | chr1.2:40038396-40038415 | None:intergenic | 60.0% | |
! | CGCCCTTGGTGCATCATCTC+CGG | + | chr1.2:40038767-40038786 | None:intergenic | 60.0% |
GTAGGTCGTCCACGCCACAC+TGG | - | chr1.2:40038802-40038821 | MS.gene37274:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 40038121 | 40041142 | 40038121 | ID=MS.gene37274 |
chr1.2 | mRNA | 40038121 | 40041142 | 40038121 | ID=MS.gene37274.t1;Parent=MS.gene37274 |
chr1.2 | exon | 40041083 | 40041142 | 40041083 | ID=MS.gene37274.t1.exon1;Parent=MS.gene37274.t1 |
chr1.2 | CDS | 40041083 | 40041142 | 40041083 | ID=cds.MS.gene37274.t1;Parent=MS.gene37274.t1 |
chr1.2 | exon | 40040116 | 40040509 | 40040116 | ID=MS.gene37274.t1.exon2;Parent=MS.gene37274.t1 |
chr1.2 | CDS | 40040116 | 40040509 | 40040116 | ID=cds.MS.gene37274.t1;Parent=MS.gene37274.t1 |
chr1.2 | exon | 40038653 | 40039266 | 40038653 | ID=MS.gene37274.t1.exon3;Parent=MS.gene37274.t1 |
chr1.2 | CDS | 40038653 | 40039266 | 40038653 | ID=cds.MS.gene37274.t1;Parent=MS.gene37274.t1 |
chr1.2 | exon | 40038121 | 40038186 | 40038121 | ID=MS.gene37274.t1.exon4;Parent=MS.gene37274.t1 |
chr1.2 | CDS | 40038121 | 40038186 | 40038121 | ID=cds.MS.gene37274.t1;Parent=MS.gene37274.t1 |
Gene Sequence |
Protein sequence |