Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37081.t1 | XP_013443410.1 | 99.7 | 377 | 1 | 0 | 1 | 377 | 1 | 377 | 1.40E-216 | 761.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37081.t1 | O81221 | 98.1 | 377 | 7 | 0 | 1 | 377 | 1 | 377 | 1.2e-216 | 753.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37081.t1 | B7FIH3 | 99.7 | 377 | 1 | 0 | 1 | 377 | 1 | 377 | 1.0e-216 | 761.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056266 | MS.gene37081 | -0.809606 | 1.74E-50 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37081.t1 | MTR_0015s0130 | 99.735 | 377 | 1 | 0 | 1 | 377 | 1 | 377 | 0.0 | 782 |
| MS.gene37081.t1 | MTR_2g096840 | 98.408 | 377 | 6 | 0 | 1 | 377 | 1 | 377 | 0.0 | 775 |
| MS.gene37081.t1 | MTR_7g093260 | 97.082 | 377 | 11 | 0 | 1 | 377 | 1 | 377 | 0.0 | 770 |
| MS.gene37081.t1 | MTR_6g004000 | 97.347 | 377 | 10 | 0 | 1 | 377 | 1 | 377 | 0.0 | 769 |
| MS.gene37081.t1 | MTR_7g026230 | 97.347 | 377 | 10 | 0 | 1 | 377 | 1 | 377 | 0.0 | 766 |
| MS.gene37081.t1 | MTR_3g095530 | 95.491 | 377 | 17 | 0 | 1 | 377 | 1 | 377 | 0.0 | 761 |
| MS.gene37081.t1 | MTR_2g008050 | 93.634 | 377 | 24 | 0 | 1 | 377 | 1 | 377 | 0.0 | 749 |
| MS.gene37081.t1 | MTR_7g027185 | 43.272 | 379 | 201 | 3 | 10 | 374 | 7 | 385 | 7.16e-120 | 352 |
| MS.gene37081.t1 | MTR_7g027185 | 44.507 | 355 | 184 | 2 | 10 | 351 | 7 | 361 | 3.71e-117 | 345 |
| MS.gene37081.t1 | MTR_7g027185 | 47.557 | 307 | 159 | 1 | 10 | 314 | 7 | 313 | 1.75e-109 | 323 |
| MS.gene37081.t1 | MTR_5g066400 | 38.031 | 447 | 203 | 12 | 1 | 376 | 1 | 444 | 1.52e-93 | 287 |
| MS.gene37081.t1 | MTR_8g464900 | 37.269 | 432 | 198 | 11 | 1 | 362 | 1 | 429 | 8.47e-87 | 269 |
| MS.gene37081.t1 | MTR_5g066400 | 35.426 | 446 | 188 | 12 | 1 | 376 | 1 | 416 | 1.08e-80 | 253 |
| MS.gene37081.t1 | MTR_8g089630 | 34.550 | 411 | 219 | 8 | 10 | 372 | 10 | 418 | 1.17e-71 | 230 |
| MS.gene37081.t1 | MTR_5g066400 | 35.000 | 400 | 189 | 11 | 1 | 332 | 1 | 397 | 1.99e-69 | 224 |
| MS.gene37081.t1 | MTR_3g030550 | 37.766 | 376 | 208 | 9 | 11 | 377 | 5 | 363 | 4.62e-68 | 219 |
| MS.gene37081.t1 | MTR_2g445210 | 28.132 | 423 | 238 | 7 | 8 | 366 | 6 | 426 | 2.85e-55 | 188 |
| MS.gene37081.t1 | MTR_8g007440 | 34.470 | 264 | 146 | 6 | 77 | 319 | 9 | 266 | 2.91e-46 | 159 |
| MS.gene37081.t1 | MTR_2g445210 | 26.613 | 372 | 207 | 7 | 8 | 315 | 6 | 375 | 2.72e-41 | 149 |
| MS.gene37081.t1 | MTR_3g010170 | 30.640 | 297 | 182 | 9 | 91 | 371 | 179 | 467 | 5.10e-40 | 148 |
| MS.gene37081.t1 | MTR_8g070520 | 31.399 | 293 | 174 | 10 | 91 | 366 | 187 | 469 | 1.24e-35 | 136 |
| MS.gene37081.t1 | MTR_8g070520 | 30.935 | 278 | 166 | 9 | 91 | 352 | 187 | 454 | 2.23e-32 | 127 |
| MS.gene37081.t1 | MTR_3g067945 | 29.365 | 252 | 159 | 7 | 9 | 245 | 21 | 268 | 2.95e-22 | 99.0 |
| MS.gene37081.t1 | MTR_3g067945 | 33.607 | 122 | 78 | 2 | 250 | 368 | 586 | 707 | 2.13e-15 | 78.2 |
| MS.gene37081.t1 | MTR_8g008540 | 70.270 | 37 | 11 | 0 | 340 | 376 | 41 | 77 | 4.15e-13 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37081.t1 | AT3G53750 | 96.552 | 377 | 13 | 0 | 1 | 377 | 1 | 377 | 0.0 | 764 |
| MS.gene37081.t1 | AT3G53750 | 96.552 | 377 | 13 | 0 | 1 | 377 | 1 | 377 | 0.0 | 764 |
| MS.gene37081.t1 | AT2G37620 | 96.552 | 377 | 13 | 0 | 1 | 377 | 1 | 377 | 0.0 | 764 |
| MS.gene37081.t1 | AT2G37620 | 96.552 | 377 | 13 | 0 | 1 | 377 | 1 | 377 | 0.0 | 764 |
| MS.gene37081.t1 | AT2G37620 | 96.552 | 377 | 13 | 0 | 1 | 377 | 1 | 377 | 0.0 | 764 |
| MS.gene37081.t1 | AT2G37620 | 96.552 | 377 | 13 | 0 | 1 | 377 | 1 | 377 | 0.0 | 764 |
| MS.gene37081.t1 | AT3G46520 | 97.082 | 377 | 11 | 0 | 1 | 377 | 1 | 377 | 0.0 | 763 |
| MS.gene37081.t1 | AT3G46520 | 97.082 | 377 | 11 | 0 | 1 | 377 | 1 | 377 | 0.0 | 763 |
| MS.gene37081.t1 | AT5G09810 | 95.756 | 377 | 16 | 0 | 1 | 377 | 1 | 377 | 0.0 | 763 |
| MS.gene37081.t1 | AT3G12110 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| MS.gene37081.t1 | AT5G59370 | 96.817 | 377 | 12 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| MS.gene37081.t1 | AT5G59370 | 96.817 | 377 | 12 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| MS.gene37081.t1 | AT3G18780 | 92.838 | 377 | 27 | 0 | 1 | 377 | 1 | 377 | 0.0 | 746 |
| MS.gene37081.t1 | AT3G18780 | 92.838 | 377 | 27 | 0 | 1 | 377 | 1 | 377 | 0.0 | 746 |
| MS.gene37081.t1 | AT1G49240 | 92.573 | 377 | 28 | 0 | 1 | 377 | 1 | 377 | 0.0 | 744 |
| MS.gene37081.t1 | AT3G18780 | 92.758 | 359 | 26 | 0 | 1 | 359 | 1 | 359 | 0.0 | 705 |
| MS.gene37081.t1 | AT2G42100 | 84.783 | 368 | 56 | 0 | 10 | 377 | 11 | 378 | 0.0 | 676 |
| MS.gene37081.t1 | AT2G42090 | 70.541 | 370 | 104 | 1 | 7 | 376 | 1 | 365 | 0.0 | 566 |
| MS.gene37081.t1 | AT2G42170 | 78.012 | 332 | 70 | 1 | 46 | 377 | 1 | 329 | 0.0 | 558 |
| MS.gene37081.t1 | AT2G42170 | 78.012 | 332 | 70 | 1 | 46 | 377 | 1 | 329 | 0.0 | 558 |
| MS.gene37081.t1 | AT2G42170 | 77.885 | 312 | 66 | 1 | 46 | 357 | 1 | 309 | 0.0 | 521 |
| MS.gene37081.t1 | AT2G42170 | 77.885 | 312 | 66 | 1 | 46 | 357 | 1 | 309 | 0.0 | 521 |
| MS.gene37081.t1 | AT2G42170 | 78.319 | 226 | 46 | 1 | 152 | 377 | 9 | 231 | 1.42e-131 | 376 |
| MS.gene37081.t1 | AT3G27000 | 44.327 | 379 | 197 | 4 | 10 | 374 | 7 | 385 | 3.43e-122 | 358 |
| MS.gene37081.t1 | AT1G18450 | 37.246 | 443 | 208 | 9 | 1 | 376 | 1 | 440 | 2.68e-95 | 291 |
| MS.gene37081.t1 | AT1G13180 | 34.615 | 416 | 212 | 11 | 10 | 372 | 9 | 417 | 8.14e-72 | 231 |
| MS.gene37081.t1 | AT3G60830 | 37.731 | 379 | 212 | 9 | 7 | 377 | 1 | 363 | 1.85e-67 | 217 |
| MS.gene37081.t1 | AT3G33520 | 30.166 | 421 | 236 | 7 | 10 | 377 | 5 | 420 | 4.18e-58 | 195 |
| MS.gene37081.t1 | AT5G56180 | 31.690 | 284 | 169 | 9 | 91 | 358 | 50 | 324 | 2.54e-35 | 132 |
| MS.gene37081.t1 | AT5G56180 | 31.690 | 284 | 169 | 9 | 91 | 358 | 182 | 456 | 1.54e-34 | 133 |
| MS.gene37081.t1 | AT3G12380 | 29.572 | 257 | 158 | 6 | 9 | 245 | 21 | 274 | 3.17e-25 | 107 |
| MS.gene37081.t1 | AT3G12380 | 33.793 | 145 | 92 | 2 | 228 | 368 | 572 | 716 | 2.65e-16 | 81.3 |
| MS.gene37081.t1 | AT3G12380 | 29.412 | 255 | 155 | 6 | 9 | 245 | 21 | 268 | 1.53e-24 | 105 |
| MS.gene37081.t1 | AT3G12380 | 33.793 | 145 | 92 | 2 | 228 | 368 | 566 | 710 | 2.64e-16 | 81.3 |
| MS.gene37081.t1 | AT1G73910 | 35.862 | 145 | 74 | 3 | 1 | 129 | 1 | 142 | 2.24e-23 | 95.1 |
| MS.gene37081.t1 | AT1G73910 | 35.862 | 145 | 74 | 3 | 1 | 129 | 1 | 142 | 2.24e-23 | 95.1 |
| MS.gene37081.t1 | AT5G56180 | 32.673 | 202 | 113 | 8 | 91 | 281 | 182 | 371 | 1.27e-19 | 89.7 |
| MS.gene37081.t1 | AT1G73910 | 29.268 | 123 | 71 | 2 | 1 | 107 | 1 | 123 | 2.91e-12 | 64.7 |
Find 107 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCTCTTGTTTGTGATAA+TGG | 0.176500 | 1.4:+39484106 | MS.gene37081:CDS |
| ATAGGTATTGTTCTTGATTC+TGG | 0.193204 | 1.4:+39485952 | MS.gene37081:intron |
| CTGGATTGGAGGCTCCATTT+TGG | 0.220933 | 1.4:+39486524 | MS.gene37081:CDS |
| AGCATGGAATTGTTAGTAAC+TGG | 0.268065 | 1.4:+39484878 | MS.gene37081:CDS |
| TGTTAGTAACTGGGATGATA+TGG | 0.302766 | 1.4:+39484888 | MS.gene37081:CDS |
| GTGATGAAGCTCAATCAAAA+AGG | 0.325898 | 1.4:+39484827 | MS.gene37081:CDS |
| GTTCACAGGAAATGCTTCTA+AGG | 0.326765 | 1.4:+39487081 | MS.gene37081:CDS |
| AGAAGAACTGGATGTTCTTC+AGG | 0.338859 | 1.4:-39484955 | None:intergenic |
| ACCAAGTAGCATGAAAATTA+AGG | 0.346175 | 1.4:+39486470 | MS.gene37081:CDS |
| AACAGCCGAGCTCGTCTTTG+AGG | 0.347903 | 1.4:-39486193 | None:intergenic |
| CTAACAATTCCATGCTCAAT+TGG | 0.355777 | 1.4:-39484871 | None:intergenic |
| TAATTGCAGGCTGGATTTGC+CGG | 0.363107 | 1.4:+39484709 | MS.gene37081:intron |
| TCCACACGCAATCCTGCGTT+TGG | 0.371608 | 1.4:+39486020 | MS.gene37081:CDS |
| CGTGGACGACCTACAATACT+AGG | 0.377152 | 1.4:-39484757 | None:intergenic |
| GGTGCTGAGGGAAGCCAAAA+TGG | 0.378341 | 1.4:-39486538 | None:intergenic |
| CACTGGTGTGATGGTTGGTA+TGG | 0.381213 | 1.4:+39484783 | MS.gene37081:CDS |
| CTTGTTTGTGATAATGGAAC+TGG | 0.393561 | 1.4:+39484112 | MS.gene37081:CDS |
| GATATTAGAAAGGATCTCTA+TGG | 0.393879 | 1.4:+39486369 | MS.gene37081:CDS |
| AGCTATGTATGTTGCCATTC+AGG | 0.402911 | 1.4:+39485053 | MS.gene37081:CDS |
| ATCCTGCGTTTGGATCTTGC+AGG | 0.408141 | 1.4:+39486030 | MS.gene37081:CDS |
| CGATTAGCCTTTGGATTAAG+TGG | 0.413728 | 1.4:-39484988 | None:intergenic |
| AGGAAGTATAGTGTCTGGAT+TGG | 0.419464 | 1.4:+39486510 | MS.gene37081:CDS |
| GATGGCTGGAAGAGTACTTC+AGG | 0.422610 | 1.4:-39486279 | None:intergenic |
| TGTTCCCCGGCATTGCTGAT+AGG | 0.428746 | 1.4:+39486421 | MS.gene37081:CDS |
| CGCCCTTGGTGCATCATCTC+CGG | 0.435198 | 1.4:-39484728 | None:intergenic |
| TATGCTAGTGGCCGTACAAC+CGG | 0.439242 | 1.4:+39485090 | MS.gene37081:CDS |
| TTCCCTCAGCACCTTCCAAC+AGG | 0.446388 | 1.4:+39486548 | MS.gene37081:CDS |
| CTCTTCCAGCCATCCATGAT+TGG | 0.448268 | 1.4:+39486288 | MS.gene37081:CDS |
| ATACATAGCTGGAGCATTGA+AGG | 0.451630 | 1.4:-39485040 | None:intergenic |
| AAGTATAGTGTCTGGATTGG+AGG | 0.453134 | 1.4:+39486513 | MS.gene37081:CDS |
| AGGGCATATCCTTCATAGAT+AGG | 0.454246 | 1.4:-39485997 | None:intergenic |
| GATGGACAGGTGATCACAAT+AGG | 0.457168 | 1.4:+39486237 | MS.gene37081:CDS |
| AAGGCTGAATATGATGAATC+AGG | 0.458861 | 1.4:+39487048 | MS.gene37081:CDS |
| AAGCGAAAGCACGGCCTGAA+TGG | 0.462189 | 1.4:-39485067 | None:intergenic |
| ATTGTGATCACCTGTCCATC+AGG | 0.463240 | 1.4:-39486234 | None:intergenic |
| CTCATCCTATCAGCAATGCC+GGG | 0.468005 | 1.4:-39486426 | None:intergenic |
| GGTGCTTCAGTGAGAAGAAC+TGG | 0.478493 | 1.4:-39484967 | None:intergenic |
| CATTTCCTGTGAACAATTGA+AGG | 0.480733 | 1.4:-39487072 | None:intergenic |
| TTCATAATCAAGAGCTATGT+AGG | 0.480816 | 1.4:-39486157 | None:intergenic |
| TAACAATTCCATGCTCAATT+GGG | 0.481241 | 1.4:-39484870 | None:intergenic |
| ATTGTTCTTGATTCTGGAGA+TGG | 0.486571 | 1.4:+39485958 | MS.gene37081:CDS |
| GCGGTGTTCCCTAGTATTGT+AGG | 0.487449 | 1.4:+39484748 | MS.gene37081:CDS |
| CAGAGAGGAAGTATAGTGTC+TGG | 0.492085 | 1.4:+39486505 | MS.gene37081:CDS |
| AACGCAGGATTGCGTGTGGA+AGG | 0.498417 | 1.4:-39486017 | None:intergenic |
| CTATGAGTTACCTGATGGAC+AGG | 0.498962 | 1.4:+39486224 | MS.gene37081:CDS |
| AGGAGCTTCCATACCAATCA+TGG | 0.501773 | 1.4:-39486301 | None:intergenic |
| GGGATGATATGGAAAAGATC+TGG | 0.506672 | 1.4:+39484899 | MS.gene37081:CDS |
| AAGAATCTTTACCGGTTGTA+CGG | 0.508172 | 1.4:-39485101 | None:intergenic |
| GTGCTTTCGCTTTATGCTAG+TGG | 0.509701 | 1.4:+39485078 | MS.gene37081:CDS |
| GCTCATCCTATCAGCAATGC+CGG | 0.518030 | 1.4:-39486427 | None:intergenic |
| GATTTCACGCTCGGCTGTTG+TGG | 0.522000 | 1.4:-39486109 | None:intergenic |
| CAGACACTATACTTCCTCTC+TGG | 0.523127 | 1.4:-39486504 | None:intergenic |
| CACACAGTTCCTATCTATGA+AGG | 0.525553 | 1.4:+39485988 | MS.gene37081:CDS |
| CCATACCAATCATGGATGGC+TGG | 0.531059 | 1.4:-39486293 | None:intergenic |
| GTCTCTCACGATTTCACGCT+CGG | 0.537921 | 1.4:-39486118 | None:intergenic |
| CCAGCCATCCATGATTGGTA+TGG | 0.540901 | 1.4:+39486293 | MS.gene37081:CDS |
| TTCAGGACAACGGAAACGTT+CGG | 0.541873 | 1.4:-39486262 | None:intergenic |
| CAGGCCCTTCAATTGTTCAC+AGG | 0.542188 | 1.4:+39487067 | MS.gene37081:CDS |
| ATGAAAATCTTAACCGAGCG+TGG | 0.549893 | 1.4:+39486075 | MS.gene37081:CDS |
| ATACCTGTTGGAAGGTGCTG+AGG | 0.550602 | 1.4:-39486551 | None:intergenic |
| GATGGTTGGTATGGGACAAA+AGG | 0.552916 | 1.4:+39484792 | MS.gene37081:CDS |
| TGAATGGCAACATACATAGC+TGG | 0.554069 | 1.4:-39485051 | None:intergenic |
| ATACTAGGGAACACCGCCCT+TGG | 0.561168 | 1.4:-39484742 | None:intergenic |
| TATGTTGTTTCATGTATACC+AGG | 0.569084 | 1.4:-39486321 | None:intergenic |
| CTAAAGTACCCAATTGAGCA+TGG | 0.570119 | 1.4:+39484862 | MS.gene37081:CDS |
| AAGAGCTATGAGTTACCTGA+TGG | 0.572599 | 1.4:+39486219 | MS.gene37081:CDS |
| GTGTGATGTCGATATTAGAA+AGG | 0.572715 | 1.4:+39486359 | MS.gene37081:CDS |
| TCCACGCCACACTGGTGTGA+TGG | 0.574722 | 1.4:+39484774 | MS.gene37081:CDS |
| ATGATTGGTATGGAAGCTCC+TGG | 0.576789 | 1.4:+39486303 | MS.gene37081:CDS |
| AGAAACCTCAAAGACGAGCT+CGG | 0.577050 | 1.4:+39486188 | MS.gene37081:CDS |
| ACGCAGGATTGCGTGTGGAA+GGG | 0.581046 | 1.4:-39486016 | None:intergenic |
| CGCCACACTGGTGTGATGGT+TGG | 0.586183 | 1.4:+39484778 | MS.gene37081:CDS |
| GAGCAAGGAGATCACAGCAT+TGG | 0.587533 | 1.4:+39486446 | MS.gene37081:CDS |
| TACCTGTTGGAAGGTGCTGA+GGG | 0.587542 | 1.4:-39486550 | None:intergenic |
| ACCATCACACCAGTGTGGCG+TGG | 0.593745 | 1.4:-39484775 | None:intergenic |
| GTTCCATTATCACAAACAAG+AGG | 0.600317 | 1.4:-39484109 | None:intergenic |
| TGCCGGAGATGATGCACCAA+GGG | 0.600516 | 1.4:+39484726 | MS.gene37081:CDS |
| ACACTATACTTCCTCTCTGG+TGG | 0.604108 | 1.4:-39486501 | None:intergenic |
| ATTTCCTGTGAACAATTGAA+GGG | 0.604151 | 1.4:-39487071 | None:intergenic |
| TAATGGAACTGGAATGGTCA+AGG | 0.604703 | 1.4:+39484123 | MS.gene37081:CDS |
| ACTAGCATAAAGCGAAAGCA+CGG | 0.615597 | 1.4:-39485076 | None:intergenic |
| TATGGAAACATCGTATTGAG+TGG | 0.620418 | 1.4:+39486387 | MS.gene37081:CDS |
| GGTGGTACGACTATGTTCCC+CGG | 0.621683 | 1.4:+39486408 | MS.gene37081:CDS |
| CATGCACTATACCTGTTGGA+AGG | 0.621879 | 1.4:-39486559 | None:intergenic |
| GGACAAAAGGATGCATATGT+TGG | 0.623959 | 1.4:+39484805 | MS.gene37081:CDS |
| TTGTGATAATGGAACTGGAA+TGG | 0.628921 | 1.4:+39484117 | MS.gene37081:CDS |
| TGAAATCGTGAGAGACGTGA+AGG | 0.629620 | 1.4:+39486125 | MS.gene37081:CDS |
| CGGAGATGATGCACCAAGGG+CGG | 0.631181 | 1.4:+39484729 | MS.gene37081:CDS |
| GCATGGAATTGTTAGTAACT+GGG | 0.633326 | 1.4:+39484879 | MS.gene37081:CDS |
| GCTTCCATACCAATCATGGA+TGG | 0.638459 | 1.4:-39486297 | None:intergenic |
| TCCAAACGCAGGATTGCGTG+TGG | 0.640726 | 1.4:-39486021 | None:intergenic |
| ACTGGTGTGATGGTTGGTAT+GGG | 0.640914 | 1.4:+39484784 | MS.gene37081:CDS |
| GGTGAAAGAGTATCCACGCT+CGG | 0.643494 | 1.4:-39486088 | None:intergenic |
| TGAAGCACCACTTAATCCAA+AGG | 0.643775 | 1.4:+39484981 | MS.gene37081:CDS |
| CATTGCTGATAGGATGAGCA+AGG | 0.644331 | 1.4:+39486431 | MS.gene37081:CDS |
| AAGTAGCATGAAAATTAAGG+TGG | 0.656638 | 1.4:+39486473 | MS.gene37081:CDS |
| GTGGACGACCTACAATACTA+GGG | 0.661189 | 1.4:-39484756 | None:intergenic |
| TTGCCGGAGATGATGCACCA+AGG | 0.662970 | 1.4:+39484725 | MS.gene37081:CDS |
| GGAAACATCGTATTGAGTGG+TGG | 0.669837 | 1.4:+39486390 | MS.gene37081:CDS |
| AATGCAGATGTGGATTGCAA+AGG | 0.677558 | 1.4:+39487029 | MS.gene37081:intron |
| TCATCCTATCAGCAATGCCG+GGG | 0.683199 | 1.4:-39486425 | None:intergenic |
| GTAGGTCGTCCACGCCACAC+TGG | 0.686011 | 1.4:+39484766 | MS.gene37081:CDS |
| GACCTGCAAGATCCAAACGC+AGG | 0.690015 | 1.4:-39486032 | None:intergenic |
| GGAAGAGTACTTCAGGACAA+CGG | 0.707065 | 1.4:-39486272 | None:intergenic |
| AGGTGGTTGCACCACCAGAG+AGG | 0.708305 | 1.4:+39486490 | MS.gene37081:CDS |
| CTTCATAGATAGGAACTGTG+TGG | 0.711555 | 1.4:-39485987 | None:intergenic |
| TACCAACCATCACACCAGTG+TGG | 0.726907 | 1.4:-39484780 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAAATTGAATGAAAAATA+CGG | - | chr1.4:39485681-39485700 | None:intergenic | 15.0% |
| !!! | TTATTTTCCTTTCATTTTAA+AGG | - | chr1.4:39486611-39486630 | None:intergenic | 15.0% |
| !!! | TTTTATAATGTTTTAAATCG+TGG | - | chr1.4:39484377-39484396 | None:intergenic | 15.0% |
| !! | AAAATTACAAAACCATTGTT+TGG | - | chr1.4:39485819-39485838 | None:intergenic | 20.0% |
| !! | AACTTTAAATTTCCAAACAA+TGG | + | chr1.4:39485804-39485823 | MS.gene37081:intron | 20.0% |
| !! | ATATCTTTACAATTCTCAAA+AGG | - | chr1.4:39485143-39485162 | None:intergenic | 20.0% |
| !! | GTAAAGATATATGTGAAAAT+TGG | + | chr1.4:39485153-39485172 | MS.gene37081:intron | 20.0% |
| !! | TAATGAGTTAGATAGAAATA+TGG | + | chr1.4:39484423-39484442 | MS.gene37081:intron | 20.0% |
| !!! | ATATGTTTGAAATGATAGAA+AGG | + | chr1.4:39485444-39485463 | MS.gene37081:intron | 20.0% |
| !!! | TTAAAATACCCTTTTTAATG+TGG | + | chr1.4:39486938-39486957 | MS.gene37081:intron | 20.0% |
| !!! | TTTTTGGTAATTTGATAGAA+TGG | - | chr1.4:39485774-39485793 | None:intergenic | 20.0% |
| ! | AAATTCTAATGAAATACGAG+TGG | - | chr1.4:39485317-39485336 | None:intergenic | 25.0% |
| ! | AACCAAAATGTGTTAAATTG+TGG | - | chr1.4:39484639-39484658 | None:intergenic | 25.0% |
| ! | AGATGATCTACAAATGAATA+TGG | + | chr1.4:39485339-39485358 | MS.gene37081:intron | 25.0% |
| ! | CAATTGTATAACACATATCA+AGG | - | chr1.4:39484556-39484575 | None:intergenic | 25.0% |
| ! | CTAATCAAATAAGATCAACA+AGG | - | chr1.4:39484164-39484183 | None:intergenic | 25.0% |
| ! | CTCTTAAACCACATTAAAAA+GGG | - | chr1.4:39486949-39486968 | None:intergenic | 25.0% |
| ! | GAAAACATATCATCAATACA+TGG | - | chr1.4:39487003-39487022 | None:intergenic | 25.0% |
| ! | GAAAGGAAAATAATGCATAA+AGG | + | chr1.4:39486618-39486637 | MS.gene37081:intron | 25.0% |
| ! | GTTTATATGAGCTTATCTAT+AGG | + | chr1.4:39486679-39486698 | MS.gene37081:intron | 25.0% |
| ! | TCTATCAAATTACCAAAAAC+TGG | + | chr1.4:39485775-39485794 | MS.gene37081:intron | 25.0% |
| ! | TGTTTATACATAGCACATAT+AGG | + | chr1.4:39486863-39486882 | MS.gene37081:intron | 25.0% |
| !! | AAAGTTTTCATTCCAGTTTT+TGG | - | chr1.4:39485790-39485809 | None:intergenic | 25.0% |
| !! | CTTGTTGATCTTATTTGATT+AGG | + | chr1.4:39484162-39484181 | MS.gene37081:intron | 25.0% |
| !! | GATCTTATTTGATTAGGTAA+AGG | + | chr1.4:39484168-39484187 | MS.gene37081:intron | 25.0% |
| !! | GATGTGTTTTATATAATTGC+AGG | + | chr1.4:39484696-39484715 | MS.gene37081:intron | 25.0% |
| !! | TACCACAATTTAACACATTT+TGG | + | chr1.4:39484634-39484653 | MS.gene37081:intron | 25.0% |
| !!! | GGGTATTTTAAACAAATGTA+TGG | - | chr1.4:39486929-39486948 | None:intergenic | 25.0% |
| !!! | TTAGAGACCTTTAAAATGAA+AGG | + | chr1.4:39486601-39486620 | MS.gene37081:intron | 25.0% |
| !!! | TTTTTATCGAAGTACTTGTA+TGG | - | chr1.4:39485240-39485259 | None:intergenic | 25.0% |
| AAGTAGCATGAAAATTAAGG+TGG | + | chr1.4:39486473-39486492 | MS.gene37081:CDS | 30.0% | |
| ACCAAGTAGCATGAAAATTA+AGG | + | chr1.4:39486470-39486489 | MS.gene37081:CDS | 30.0% | |
| ATTTCCTGTGAACAATTGAA+GGG | - | chr1.4:39487074-39487093 | None:intergenic | 30.0% | |
| CATAGAAGAAGAATCTTTAC+CGG | - | chr1.4:39485112-39485131 | None:intergenic | 30.0% | |
| CCTCTTAAACCACATTAAAA+AGG | - | chr1.4:39486950-39486969 | None:intergenic | 30.0% | |
| GATAAGCACTTATGCTATAA+GGG | + | chr1.4:39486885-39486904 | MS.gene37081:intron | 30.0% | |
| GATATTAGAAAGGATCTCTA+TGG | + | chr1.4:39486369-39486388 | MS.gene37081:CDS | 30.0% | |
| TAACAATTCCATGCTCAATT+GGG | - | chr1.4:39484873-39484892 | None:intergenic | 30.0% | |
| TCAAATAAGATCAACAAGGT+TGG | - | chr1.4:39484160-39484179 | None:intergenic | 30.0% | |
| TCTTGTAATCTAGTAGTACA+TGG | + | chr1.4:39484530-39484549 | MS.gene37081:intron | 30.0% | |
| TGATGAAGCTCAATCAAAAA+GGG | + | chr1.4:39484828-39484847 | MS.gene37081:CDS | 30.0% | |
| TTCATAATCAAGAGCTATGT+AGG | - | chr1.4:39486160-39486179 | None:intergenic | 30.0% | |
| ! | ACCTTAATTTTCATGCTACT+TGG | - | chr1.4:39486474-39486493 | None:intergenic | 30.0% |
| ! | ATAGAATGGTGCTGAATTAT+AGG | - | chr1.4:39485760-39485779 | None:intergenic | 30.0% |
| ! | ATAGGTATTGTTCTTGATTC+TGG | + | chr1.4:39485952-39485971 | MS.gene37081:intron | 30.0% |
| ! | ATGTATGAATATGAAGCACT+TGG | + | chr1.4:39485498-39485517 | MS.gene37081:intron | 30.0% |
| ! | CCTTTTTAATGTGGTTTAAG+AGG | + | chr1.4:39486947-39486966 | MS.gene37081:intron | 30.0% |
| ! | TAATAGTCAACAAGCTTGTT+TGG | + | chr1.4:39486652-39486671 | MS.gene37081:intron | 30.0% |
| ! | TGTTTTATATAATTGCAGGC+TGG | + | chr1.4:39484700-39484719 | MS.gene37081:intron | 30.0% |
| ! | TTTCTTTTCTAATGCAGATG+TGG | + | chr1.4:39487019-39487038 | MS.gene37081:intron | 30.0% |
| ! | TTTTGTAATCAAGCACTACT+TGG | + | chr1.4:39484669-39484688 | MS.gene37081:intron | 30.0% |
| !! | AGGTAAAGGTTTTTCGAAAA+AGG | + | chr1.4:39484182-39484201 | MS.gene37081:intron | 30.0% |
| !! | TATGTTGTTTCATGTATACC+AGG | - | chr1.4:39486324-39486343 | None:intergenic | 30.0% |
| AAATCATGCACTATACCTGT+TGG | - | chr1.4:39486566-39486585 | None:intergenic | 35.0% | |
| AAGGCTGAATATGATGAATC+AGG | + | chr1.4:39487048-39487067 | MS.gene37081:CDS | 35.0% | |
| AGCATGGAATTGTTAGTAAC+TGG | + | chr1.4:39484878-39484897 | MS.gene37081:CDS | 35.0% | |
| ATAAGATCAACAAGGTTGGA+TGG | - | chr1.4:39484156-39484175 | None:intergenic | 35.0% | |
| CATTTCCTGTGAACAATTGA+AGG | - | chr1.4:39487075-39487094 | None:intergenic | 35.0% | |
| CTAACAATTCCATGCTCAAT+TGG | - | chr1.4:39484874-39484893 | None:intergenic | 35.0% | |
| GATGAAGCTCAATCAAAAAG+GGG | + | chr1.4:39484829-39484848 | MS.gene37081:CDS | 35.0% | |
| GCATGGAATTGTTAGTAACT+GGG | + | chr1.4:39484879-39484898 | MS.gene37081:CDS | 35.0% | |
| GGATAAGCACTTATGCTATA+AGG | + | chr1.4:39486884-39486903 | MS.gene37081:intron | 35.0% | |
| GTGATGAAGCTCAATCAAAA+AGG | + | chr1.4:39484827-39484846 | MS.gene37081:CDS | 35.0% | |
| GTGTGATGTCGATATTAGAA+AGG | + | chr1.4:39486359-39486378 | MS.gene37081:CDS | 35.0% | |
| GTTCCATTATCACAAACAAG+AGG | - | chr1.4:39484112-39484131 | None:intergenic | 35.0% | |
| TATGGAAACATCGTATTGAG+TGG | + | chr1.4:39486387-39486406 | MS.gene37081:CDS | 35.0% | |
| TGCAGGAATTACTAATGTCA+TGG | + | chr1.4:39485373-39485392 | MS.gene37081:intron | 35.0% | |
| TGTATGACAGCATCAAATAC+TGG | - | chr1.4:39485268-39485287 | None:intergenic | 35.0% | |
| TGTTAGTAACTGGGATGATA+TGG | + | chr1.4:39484888-39484907 | MS.gene37081:CDS | 35.0% | |
| ! | AAGAATCTTTACCGGTTGTA+CGG | - | chr1.4:39485104-39485123 | None:intergenic | 35.0% |
| ! | AGTTTTCTTCCTGCAATATG+TGG | + | chr1.4:39485712-39485731 | MS.gene37081:intron | 35.0% |
| ! | ATATGGATTGTACAACTTGC+AGG | + | chr1.4:39485356-39485375 | MS.gene37081:intron | 35.0% |
| ! | ATTGTTCTTGATTCTGGAGA+TGG | + | chr1.4:39485958-39485977 | MS.gene37081:CDS | 35.0% |
| ! | CAACCTCTTGTTTGTGATAA+TGG | + | chr1.4:39484106-39484125 | MS.gene37081:CDS | 35.0% |
| ! | CGTAGTTCACATCTTGTTAT+AGG | + | chr1.4:39485934-39485953 | MS.gene37081:intron | 35.0% |
| ! | CTCGGTTAAGATTTTCATGA+GGG | - | chr1.4:39486073-39486092 | None:intergenic | 35.0% |
| !! | CGAAGTACTTGTATGGATTT+TGG | - | chr1.4:39485233-39485252 | None:intergenic | 35.0% |
| !! | CTTGTTTGTGATAATGGAAC+TGG | + | chr1.4:39484112-39484131 | MS.gene37081:CDS | 35.0% |
| !! | TTGTGATAATGGAACTGGAA+TGG | + | chr1.4:39484117-39484136 | MS.gene37081:CDS | 35.0% |
| !!! | ATTTTCTCACGATTAGCCTT+TGG | - | chr1.4:39485000-39485019 | None:intergenic | 35.0% |
| AAGAGCTATGAGTTACCTGA+TGG | + | chr1.4:39486219-39486238 | MS.gene37081:CDS | 40.0% | |
| ACTAGCATAAAGCGAAAGCA+CGG | - | chr1.4:39485079-39485098 | None:intergenic | 40.0% | |
| AGAAGAACTGGATGTTCTTC+AGG | - | chr1.4:39484958-39484977 | None:intergenic | 40.0% | |
| AGCTATGTATGTTGCCATTC+AGG | + | chr1.4:39485053-39485072 | MS.gene37081:CDS | 40.0% | |
| AGGGCATATCCTTCATAGAT+AGG | - | chr1.4:39486000-39486019 | None:intergenic | 40.0% | |
| ATGAAAATCTTAACCGAGCG+TGG | + | chr1.4:39486075-39486094 | MS.gene37081:CDS | 40.0% | |
| ATTCAAGACCCTGGATCATT+AGG | + | chr1.4:39485179-39485198 | MS.gene37081:intron | 40.0% | |
| CAATATGTGGTCATGGATGA+AGG | + | chr1.4:39485725-39485744 | MS.gene37081:intron | 40.0% | |
| CACACAGTTCCTATCTATGA+AGG | + | chr1.4:39485988-39486007 | MS.gene37081:CDS | 40.0% | |
| CACTGTGTCAATGTCATATG+TGG | - | chr1.4:39485537-39485556 | None:intergenic | 40.0% | |
| CTTCATAGATAGGAACTGTG+TGG | - | chr1.4:39485990-39486009 | None:intergenic | 40.0% | |
| GGACAAAAGGATGCATATGT+TGG | + | chr1.4:39484805-39484824 | MS.gene37081:CDS | 40.0% | |
| GGGATGATATGGAAAAGATC+TGG | + | chr1.4:39484899-39484918 | MS.gene37081:CDS | 40.0% | |
| TAATGGAACTGGAATGGTCA+AGG | + | chr1.4:39484123-39484142 | MS.gene37081:CDS | 40.0% | |
| TGAATGGCAACATACATAGC+TGG | - | chr1.4:39485054-39485073 | None:intergenic | 40.0% | |
| TGATATCTAAGCGCAGCTTA+AGG | + | chr1.4:39485857-39485876 | MS.gene37081:intron | 40.0% | |
| TTCAAGACCCTGGATCATTA+GGG | + | chr1.4:39485180-39485199 | MS.gene37081:intron | 40.0% | |
| ! | AAGTATAGTGTCTGGATTGG+AGG | + | chr1.4:39486513-39486532 | MS.gene37081:CDS | 40.0% |
| ! | AATGCAGATGTGGATTGCAA+AGG | + | chr1.4:39487029-39487048 | MS.gene37081:intron | 40.0% |
| ! | AGGAAGTATAGTGTCTGGAT+TGG | + | chr1.4:39486510-39486529 | MS.gene37081:CDS | 40.0% |
| ! | CTAAAGTACCCAATTGAGCA+TGG | + | chr1.4:39484862-39484881 | MS.gene37081:CDS | 40.0% |
| ! | GCTCGGTTAAGATTTTCATG+AGG | - | chr1.4:39486074-39486093 | None:intergenic | 40.0% |
| ! | GTCAACAAGCTTGTTTGGTT+TGG | + | chr1.4:39486657-39486676 | MS.gene37081:intron | 40.0% |
| ! | TGAAGCACCACTTAATCCAA+AGG | + | chr1.4:39484981-39485000 | MS.gene37081:CDS | 40.0% |
| !! | ATACATAGCTGGAGCATTGA+AGG | - | chr1.4:39485043-39485062 | None:intergenic | 40.0% |
| !! | CGATTAGCCTTTGGATTAAG+TGG | - | chr1.4:39484991-39485010 | None:intergenic | 40.0% |
| AATTGGCGTATTCAAGACCC+TGG | + | chr1.4:39485170-39485189 | MS.gene37081:intron | 45.0% | |
| ACACTATACTTCCTCTCTGG+TGG | - | chr1.4:39486504-39486523 | None:intergenic | 45.0% | |
| AGAAACCTCAAAGACGAGCT+CGG | + | chr1.4:39486188-39486207 | MS.gene37081:CDS | 45.0% | |
| AGGAGCTTCCATACCAATCA+TGG | - | chr1.4:39486304-39486323 | None:intergenic | 45.0% | |
| ATACGGACACATCAGATCGA+CGG | - | chr1.4:39485664-39485683 | None:intergenic | 45.0% | |
| ATACTATGATGTCGCTGTCG+CGG | - | chr1.4:39484261-39484280 | None:intergenic | 45.0% | |
| ATCACAAGTGACCGCAATTC+TGG | + | chr1.4:39484299-39484318 | MS.gene37081:intron | 45.0% | |
| ATGATTGGTATGGAAGCTCC+TGG | + | chr1.4:39486303-39486322 | MS.gene37081:CDS | 45.0% | |
| ATTGTGATCACCTGTCCATC+AGG | - | chr1.4:39486237-39486256 | None:intergenic | 45.0% | |
| CAGACACTATACTTCCTCTC+TGG | - | chr1.4:39486507-39486526 | None:intergenic | 45.0% | |
| CATCCATGACCACATATTGC+AGG | - | chr1.4:39485724-39485743 | None:intergenic | 45.0% | |
| CATGCACTATACCTGTTGGA+AGG | - | chr1.4:39486562-39486581 | None:intergenic | 45.0% | |
| CATTGCTGATAGGATGAGCA+AGG | + | chr1.4:39486431-39486450 | MS.gene37081:CDS | 45.0% | |
| CTTCCTGCAATATGTGGTCA+TGG | + | chr1.4:39485718-39485737 | MS.gene37081:intron | 45.0% | |
| GAACTGGAATGGTCAAGGTA+TGG | + | chr1.4:39484128-39484147 | MS.gene37081:intron | 45.0% | |
| GATGGACAGGTGATCACAAT+AGG | + | chr1.4:39486237-39486256 | MS.gene37081:CDS | 45.0% | |
| GCTTCCATACCAATCATGGA+TGG | - | chr1.4:39486300-39486319 | None:intergenic | 45.0% | |
| GGAAACATCGTATTGAGTGG+TGG | + | chr1.4:39486390-39486409 | MS.gene37081:CDS | 45.0% | |
| GGAATGCAGTGAAGTGAAAC+AGG | + | chr1.4:39485465-39485484 | MS.gene37081:intron | 45.0% | |
| GTGCTTTCGCTTTATGCTAG+TGG | + | chr1.4:39485078-39485097 | MS.gene37081:CDS | 45.0% | |
| GTGGACGACCTACAATACTA+GGG | - | chr1.4:39484759-39484778 | None:intergenic | 45.0% | |
| TAAGCGCAGCTTAAGGAACT+TGG | + | chr1.4:39485864-39485883 | MS.gene37081:intron | 45.0% | |
| TAATTGCAGGCTGGATTTGC+CGG | + | chr1.4:39484709-39484728 | MS.gene37081:intron | 45.0% | |
| TGAAATCGTGAGAGACGTGA+AGG | + | chr1.4:39486125-39486144 | MS.gene37081:CDS | 45.0% | |
| TTCAGGACAACGGAAACGTT+CGG | - | chr1.4:39486265-39486284 | None:intergenic | 45.0% | |
| TTCATGTAGCTAACCCCACT+TGG | + | chr1.4:39484476-39484495 | MS.gene37081:intron | 45.0% | |
| ! | ACTGGTGTGATGGTTGGTAT+GGG | + | chr1.4:39484784-39484803 | MS.gene37081:CDS | 45.0% |
| ! | CAGAGAGGAAGTATAGTGTC+TGG | + | chr1.4:39486505-39486524 | MS.gene37081:CDS | 45.0% |
| ! | CTATGAGTTACCTGATGGAC+AGG | + | chr1.4:39486224-39486243 | MS.gene37081:CDS | 45.0% |
| ! | GATGGTTGGTATGGGACAAA+AGG | + | chr1.4:39484792-39484811 | MS.gene37081:CDS | 45.0% |
| !! | GGAAGAGTACTTCAGGACAA+CGG | - | chr1.4:39486275-39486294 | None:intergenic | 45.0% |
| AATTGCGATCCTTGCGAGTC+TGG | + | chr1.4:39484592-39484611 | MS.gene37081:intron | 50.0% | |
| AGACCCTGGATCATTAGGGT+CGG | + | chr1.4:39485184-39485203 | MS.gene37081:intron | 50.0% | |
| AGCTGATGCAGCCAGAATTG+CGG | - | chr1.4:39484313-39484332 | None:intergenic | 50.0% | |
| AGTCCGACCCTAATGATCCA+GGG | - | chr1.4:39485190-39485209 | None:intergenic | 50.0% | |
| ATCCTGCGTTTGGATCTTGC+AGG | + | chr1.4:39486030-39486049 | MS.gene37081:CDS | 50.0% | |
| ATGTAGCTAACCCCACTTGG+TGG | + | chr1.4:39484479-39484498 | MS.gene37081:intron | 50.0% | |
| ATTGCGATCCTTGCGAGTCT+GGG | + | chr1.4:39484593-39484612 | MS.gene37081:intron | 50.0% | |
| CAGGCCCTTCAATTGTTCAC+AGG | + | chr1.4:39487067-39487086 | MS.gene37081:CDS | 50.0% | |
| CCAGCCATCCATGATTGGTA+TGG | + | chr1.4:39486293-39486312 | MS.gene37081:CDS | 50.0% | |
| CCATACCAATCATGGATGGC+TGG | - | chr1.4:39486296-39486315 | None:intergenic | 50.0% | |
| CGTGGACGACCTACAATACT+AGG | - | chr1.4:39484760-39484779 | None:intergenic | 50.0% | |
| CTCATCCTATCAGCAATGCC+GGG | - | chr1.4:39486429-39486448 | None:intergenic | 50.0% | |
| CTCTTCCAGCCATCCATGAT+TGG | + | chr1.4:39486288-39486307 | MS.gene37081:CDS | 50.0% | |
| GAGCAAGGAGATCACAGCAT+TGG | + | chr1.4:39486446-39486465 | MS.gene37081:CDS | 50.0% | |
| GAGTCTGGGGAATTGGAACA+CGG | + | chr1.4:39484607-39484626 | MS.gene37081:intron | 50.0% | |
| GCGGTGTTCCCTAGTATTGT+AGG | + | chr1.4:39484748-39484767 | MS.gene37081:CDS | 50.0% | |
| GCTCATCCTATCAGCAATGC+CGG | - | chr1.4:39486430-39486449 | None:intergenic | 50.0% | |
| GGTGCTTCAGTGAGAAGAAC+TGG | - | chr1.4:39484970-39484989 | None:intergenic | 50.0% | |
| GTCTCTCACGATTTCACGCT+CGG | - | chr1.4:39486121-39486140 | None:intergenic | 50.0% | |
| TACCAACCATCACACCAGTG+TGG | - | chr1.4:39484783-39484802 | None:intergenic | 50.0% | |
| TAGTCCGACCCTAATGATCC+AGG | - | chr1.4:39485191-39485210 | None:intergenic | 50.0% | |
| TATGCTAGTGGCCGTACAAC+CGG | + | chr1.4:39485090-39485109 | MS.gene37081:CDS | 50.0% | |
| TCATCCTATCAGCAATGCCG+GGG | - | chr1.4:39486428-39486447 | None:intergenic | 50.0% | |
| TGTAGCTAACCCCACTTGGT+GGG | + | chr1.4:39484480-39484499 | MS.gene37081:intron | 50.0% | |
| ! | AAGCCTTATCCCACCAAGTG+GGG | - | chr1.4:39484492-39484511 | None:intergenic | 50.0% |
| ! | CAAGCCTTATCCCACCAAGT+GGG | - | chr1.4:39484493-39484512 | None:intergenic | 50.0% |
| ! | CACTGGTGTGATGGTTGGTA+TGG | + | chr1.4:39484783-39484802 | MS.gene37081:CDS | 50.0% |
| ! | TAACCCCACTTGGTGGGATA+AGG | + | chr1.4:39484486-39484505 | MS.gene37081:intron | 50.0% |
| ! | TCAAGCCTTATCCCACCAAG+TGG | - | chr1.4:39484494-39484513 | None:intergenic | 50.0% |
| !! | ATACCTGTTGGAAGGTGCTG+AGG | - | chr1.4:39486554-39486573 | None:intergenic | 50.0% |
| !! | CTGGATTGGAGGCTCCATTT+TGG | + | chr1.4:39486524-39486543 | MS.gene37081:CDS | 50.0% |
| !! | GATGGCTGGAAGAGTACTTC+AGG | - | chr1.4:39486282-39486301 | None:intergenic | 50.0% |
| !! | GGTGAAAGAGTATCCACGCT+CGG | - | chr1.4:39486091-39486110 | None:intergenic | 50.0% |
| !! | TACCTGTTGGAAGGTGCTGA+GGG | - | chr1.4:39486553-39486572 | None:intergenic | 50.0% |
| AACAGCCGAGCTCGTCTTTG+AGG | - | chr1.4:39486196-39486215 | None:intergenic | 55.0% | |
| AACGCAGGATTGCGTGTGGA+AGG | - | chr1.4:39486020-39486039 | None:intergenic | 55.0% | |
| ACGCAGGATTGCGTGTGGAA+GGG | - | chr1.4:39486019-39486038 | None:intergenic | 55.0% | |
| ATACTAGGGAACACCGCCCT+TGG | - | chr1.4:39484745-39484764 | None:intergenic | 55.0% | |
| GACCTGCAAGATCCAAACGC+AGG | - | chr1.4:39486035-39486054 | None:intergenic | 55.0% | |
| GATTTCACGCTCGGCTGTTG+TGG | - | chr1.4:39486112-39486131 | None:intergenic | 55.0% | |
| GCTGCATTTGACTGCGAGTC+TGG | + | chr1.4:39484330-39484349 | MS.gene37081:intron | 55.0% | |
| GGTGGTACGACTATGTTCCC+CGG | + | chr1.4:39486408-39486427 | MS.gene37081:CDS | 55.0% | |
| TCCAAACGCAGGATTGCGTG+TGG | - | chr1.4:39486024-39486043 | None:intergenic | 55.0% | |
| TCCAATTCCCCAGACTCGCA+AGG | - | chr1.4:39484604-39484623 | None:intergenic | 55.0% | |
| TCCACACGCAATCCTGCGTT+TGG | + | chr1.4:39486020-39486039 | MS.gene37081:CDS | 55.0% | |
| TCCTTGCGAGTCTGGGGAAT+TGG | + | chr1.4:39484600-39484619 | MS.gene37081:intron | 55.0% | |
| TGCCGGAGATGATGCACCAA+GGG | + | chr1.4:39484726-39484745 | MS.gene37081:CDS | 55.0% | |
| TGTTCCCCGGCATTGCTGAT+AGG | + | chr1.4:39486421-39486440 | MS.gene37081:CDS | 55.0% | |
| TTCCCTCAGCACCTTCCAAC+AGG | + | chr1.4:39486548-39486567 | MS.gene37081:CDS | 55.0% | |
| TTGCCGGAGATGATGCACCA+AGG | + | chr1.4:39484725-39484744 | MS.gene37081:CDS | 55.0% | |
| TTGCGATCCTTGCGAGTCTG+GGG | + | chr1.4:39484594-39484613 | MS.gene37081:intron | 55.0% | |
| ! | AAGCGAAAGCACGGCCTGAA+TGG | - | chr1.4:39485070-39485089 | None:intergenic | 55.0% |
| ! | GGTGCTGAGGGAAGCCAAAA+TGG | - | chr1.4:39486541-39486560 | None:intergenic | 55.0% |
| ACCATCACACCAGTGTGGCG+TGG | - | chr1.4:39484778-39484797 | None:intergenic | 60.0% | |
| AGGTGGTTGCACCACCAGAG+AGG | + | chr1.4:39486490-39486509 | MS.gene37081:CDS | 60.0% | |
| CGCCACACTGGTGTGATGGT+TGG | + | chr1.4:39484778-39484797 | MS.gene37081:CDS | 60.0% | |
| CGGAGATGATGCACCAAGGG+CGG | + | chr1.4:39484729-39484748 | MS.gene37081:CDS | 60.0% | |
| TCCACGCCACACTGGTGTGA+TGG | + | chr1.4:39484774-39484793 | MS.gene37081:CDS | 60.0% | |
| TCGTGGCAGCAGTCATGTCG+CGG | - | chr1.4:39484360-39484379 | None:intergenic | 60.0% | |
| ! | CGCCCTTGGTGCATCATCTC+CGG | - | chr1.4:39484731-39484750 | None:intergenic | 60.0% |
| GTAGGTCGTCCACGCCACAC+TGG | + | chr1.4:39484766-39484785 | MS.gene37081:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 39484085 | 39487101 | 39484085 | ID=MS.gene37081 |
| chr1.4 | mRNA | 39484085 | 39487101 | 39484085 | ID=MS.gene37081.t1;Parent=MS.gene37081 |
| chr1.4 | exon | 39484085 | 39484144 | 39484085 | ID=MS.gene37081.t1.exon1;Parent=MS.gene37081.t1 |
| chr1.4 | CDS | 39484085 | 39484144 | 39484085 | ID=cds.MS.gene37081.t1;Parent=MS.gene37081.t1 |
| chr1.4 | exon | 39484718 | 39485111 | 39484718 | ID=MS.gene37081.t1.exon2;Parent=MS.gene37081.t1 |
| chr1.4 | CDS | 39484718 | 39485111 | 39484718 | ID=cds.MS.gene37081.t1;Parent=MS.gene37081.t1 |
| chr1.4 | exon | 39485956 | 39486569 | 39485956 | ID=MS.gene37081.t1.exon3;Parent=MS.gene37081.t1 |
| chr1.4 | CDS | 39485956 | 39486569 | 39485956 | ID=cds.MS.gene37081.t1;Parent=MS.gene37081.t1 |
| chr1.4 | exon | 39487036 | 39487101 | 39487036 | ID=MS.gene37081.t1.exon4;Parent=MS.gene37081.t1 |
| chr1.4 | CDS | 39487036 | 39487101 | 39487036 | ID=cds.MS.gene37081.t1;Parent=MS.gene37081.t1 |
| Gene Sequence |
| Protein sequence |
