Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015852.t1 | XP_003630669.1 | 97.6 | 548 | 13 | 0 | 14 | 561 | 4 | 551 | 1.40E-294 | 1021.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015852.t1 | Q9SW96 | 71.2 | 549 | 156 | 1 | 15 | 561 | 24 | 572 | 1.6e-233 | 810.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015852.t1 | G7LJN2 | 97.6 | 548 | 13 | 0 | 14 | 561 | 4 | 551 | 1.0e-294 | 1021.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene015852 | MS.gene070503 | PPI |
| MS.gene81615 | MS.gene015852 | PPI |
| MS.gene015852 | MS.gene016758 | PPI |
| MS.gene070492 | MS.gene015852 | PPI |
| MS.gene015852 | MS.gene070511 | PPI |
| MS.gene016742 | MS.gene015852 | PPI |
| MS.gene070510 | MS.gene015852 | PPI |
| MS.gene015852 | MS.gene057884 | PPI |
| MS.gene81622 | MS.gene015852 | PPI |
| MS.gene016743 | MS.gene015852 | PPI |
| MS.gene37911 | MS.gene015852 | PPI |
| MS.gene057883 | MS.gene015852 | PPI |
| MS.gene015852 | MS.gene67840 | PPI |
| MS.gene070505 | MS.gene015852 | PPI |
| MS.gene057886 | MS.gene015852 | PPI |
| MS.gene070509 | MS.gene015852 | PPI |
| MS.gene015852 | MS.gene81617 | PPI |
| MS.gene070507 | MS.gene015852 | PPI |
| MS.gene81620 | MS.gene015852 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015852.t1 | MTR_8g102050 | 97.993 | 548 | 11 | 0 | 14 | 561 | 4 | 551 | 0.0 | 1114 |
| MS.gene015852.t1 | MTR_7g101050 | 88.946 | 579 | 43 | 7 | 1 | 561 | 1 | 576 | 0.0 | 1031 |
| MS.gene015852.t1 | MTR_8g011530 | 46.369 | 537 | 280 | 5 | 25 | 560 | 103 | 632 | 1.66e-169 | 495 |
| MS.gene015852.t1 | MTR_4g100920 | 48.502 | 534 | 202 | 9 | 33 | 561 | 81 | 546 | 2.65e-167 | 486 |
| MS.gene015852.t1 | MTR_4g100920 | 61.453 | 179 | 65 | 2 | 279 | 456 | 266 | 441 | 6.41e-69 | 229 |
| MS.gene015852.t1 | MTR_4g100920 | 47.159 | 176 | 85 | 4 | 33 | 204 | 81 | 252 | 4.78e-43 | 160 |
| MS.gene015852.t1 | MTR_1g014140 | 30.605 | 281 | 175 | 8 | 285 | 558 | 271 | 538 | 1.10e-27 | 117 |
| MS.gene015852.t1 | MTR_5g028360 | 30.605 | 281 | 175 | 9 | 285 | 558 | 319 | 586 | 1.66e-27 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015852.t1 | AT5G56680 | 73.866 | 551 | 142 | 1 | 13 | 561 | 22 | 572 | 0.0 | 879 |
| MS.gene015852.t1 | AT1G70980 | 71.150 | 565 | 155 | 5 | 2 | 561 | 10 | 571 | 0.0 | 843 |
| MS.gene015852.t1 | AT4G17300 | 46.995 | 549 | 219 | 9 | 18 | 561 | 86 | 567 | 6.06e-167 | 486 |
| MS.gene015852.t1 | AT4G17300 | 46.995 | 549 | 219 | 9 | 18 | 561 | 106 | 587 | 1.23e-166 | 486 |
| MS.gene015852.t1 | AT3G07420 | 47.628 | 506 | 251 | 7 | 61 | 560 | 140 | 637 | 1.15e-165 | 485 |
| MS.gene015852.t1 | AT3G07420 | 44.935 | 385 | 198 | 7 | 61 | 439 | 140 | 516 | 7.08e-109 | 336 |
| MS.gene015852.t1 | AT4G31180 | 31.317 | 281 | 173 | 8 | 285 | 558 | 288 | 555 | 2.12e-28 | 119 |
| MS.gene015852.t1 | AT4G31180 | 31.317 | 281 | 173 | 8 | 285 | 558 | 288 | 555 | 2.12e-28 | 119 |
| MS.gene015852.t1 | AT1G68420 | 63.636 | 77 | 28 | 0 | 315 | 391 | 1 | 77 | 5.53e-28 | 107 |
| MS.gene015852.t1 | AT4G26870 | 29.242 | 277 | 176 | 9 | 285 | 554 | 262 | 525 | 3.26e-26 | 112 |
| MS.gene015852.t1 | AT5G38750 | 35.570 | 149 | 51 | 5 | 26 | 169 | 19 | 127 | 2.27e-15 | 73.6 |
Find 139 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGAGGATATGGAATTTA+TGG | 0.136941 | 4.3:-3366039 | MS.gene015852:CDS |
| CCAGGCATTTGGCTGAATTT+TGG | 0.190908 | 4.3:-3366414 | MS.gene015852:CDS |
| TAGAATGCTTTGATTTCTTT+TGG | 0.211540 | 4.3:+3365598 | None:intergenic |
| TTTCAGGTTGGAGAGTTAAT+TGG | 0.238466 | 4.3:-3365249 | MS.gene015852:intron |
| CCTCGGTTACGGTGGATAAT+TGG | 0.242154 | 4.3:+3367810 | None:intergenic |
| AATTTGAGAAAGAAGTAAAA+TGG | 0.264571 | 4.3:-3365896 | MS.gene015852:CDS |
| AGCTGCTAAGCTTGTTGTTC+AGG | 0.277489 | 4.3:-3366731 | MS.gene015852:CDS |
| TGACAACTGCCTTGAGGATA+TGG | 0.287783 | 4.3:-3366048 | MS.gene015852:CDS |
| GAAGCTTACCGTGTTGGTTC+TGG | 0.296078 | 4.3:+3367379 | None:intergenic |
| TTCAGGTTGGAGAGTTAATT+GGG | 0.300812 | 4.3:-3365248 | MS.gene015852:intron |
| CATCTCAAACTTCCTCCTTC+TGG | 0.307642 | 4.3:-3367530 | MS.gene015852:CDS |
| TTGCATTGATCGTTTGAAAA+TGG | 0.308329 | 4.3:-3365997 | MS.gene015852:CDS |
| TTCTCACACTTCCAGGCATT+TGG | 0.323004 | 4.3:-3366425 | MS.gene015852:CDS |
| GACGCTTCGCTTGCTGATCT+TGG | 0.338136 | 4.3:-3367593 | MS.gene015852:CDS |
| AAGTCTGCAAACGCAATTTC+AGG | 0.340094 | 4.3:+3366382 | None:intergenic |
| GATCGAGCTTCGCGCTGAAC+AGG | 0.346443 | 4.3:-3367495 | MS.gene015852:CDS |
| CCATAGCAGCCACTGTCTTT+AGG | 0.350322 | 4.3:+3365557 | None:intergenic |
| ATGTTACAGACTAGAGGATA+TGG | 0.353962 | 4.3:-3365053 | MS.gene015852:intron |
| CAGAGAATTCTCACACTTCC+AGG | 0.362661 | 4.3:-3366432 | MS.gene015852:CDS |
| TGAAATTGCGTTTGCAGACT+TGG | 0.364314 | 4.3:-3366380 | MS.gene015852:CDS |
| TCTGATACTTCACCTCTGTT+AGG | 0.364762 | 4.3:+3365644 | None:intergenic |
| CGCCGTGAAGACGGCGGATC+AGG | 0.364782 | 4.3:-3367740 | MS.gene015852:CDS |
| ATGGCCGACAAGTTTGATAA+AGG | 0.367425 | 4.3:-3366020 | MS.gene015852:CDS |
| TACAGAAGCTGTGGAAATAC+TGG | 0.367791 | 4.3:-3365943 | MS.gene015852:CDS |
| ATTTGAGAAAGAAGTAAAAT+GGG | 0.373720 | 4.3:-3365895 | MS.gene015852:CDS |
| AAAGGCGAAAGCGTCCTTAT+CGG | 0.375770 | 4.3:+3367664 | None:intergenic |
| GACGATAACTTGAAGGTTAC+CGG | 0.386145 | 4.3:+3367616 | None:intergenic |
| TACCATTCATATGGCTCAAC+AGG | 0.392016 | 4.3:+3365025 | None:intergenic |
| CTTAGTCGCGTGTATACATT+TGG | 0.394717 | 4.3:-3366469 | MS.gene015852:CDS |
| GGATATTTAGCAGGATCAAC+AGG | 0.402646 | 4.3:+3367458 | None:intergenic |
| TCCGTCCTTTCGAGGAATAC+CGG | 0.412212 | 4.3:+3366579 | None:intergenic |
| TTCAAAGCCAAGACCGAATC+CGG | 0.420519 | 4.3:+3364967 | None:intergenic |
| CAAGGATTCAAGAGTGAGTC+TGG | 0.425712 | 4.3:+3367424 | None:intergenic |
| TCCGTCGTTCAATTCCAAAA+AGG | 0.425770 | 4.3:+3367646 | None:intergenic |
| GCTGTCGGAGAATTCAGCTT+TGG | 0.429447 | 4.3:+3367784 | None:intergenic |
| TATCTGCTGTTGCTCGGATT+CGG | 0.429555 | 4.3:-3366945 | MS.gene015852:CDS |
| CATCATAACGCTCCTCCCTT+TGG | 0.431653 | 4.3:+3365220 | None:intergenic |
| AAACATGCCGGATTCGGTCT+TGG | 0.433671 | 4.3:-3364974 | MS.gene015852:CDS |
| TCCACCTTTCCGTCCTTTCG+AGG | 0.434861 | 4.3:+3366571 | None:intergenic |
| CTGTCGGAGAATTCAGCTTT+GGG | 0.435015 | 4.3:+3367785 | None:intergenic |
| ACAGTGAAACATGCCGGATT+CGG | 0.441656 | 4.3:-3364980 | MS.gene015852:CDS |
| CAATCACTAGTGGTGACAAT+TGG | 0.443292 | 4.3:+3366859 | None:intergenic |
| AGCTTTGGGAACCTCGGTTA+CGG | 0.446521 | 4.3:+3367799 | None:intergenic |
| CCAAAATTCAGCCAAATGCC+TGG | 0.449352 | 4.3:+3366414 | None:intergenic |
| CCTAAAGACAGTGGCTGCTA+TGG | 0.464078 | 4.3:-3365557 | MS.gene015852:CDS |
| GCAACCTTTATCAAACTTGT+CGG | 0.464855 | 4.3:+3366016 | None:intergenic |
| TCACTGTTCCATACCGCCTC+AGG | 0.466762 | 4.3:+3364996 | None:intergenic |
| AACCTGATCCGCCGTCTTCA+CGG | 0.469954 | 4.3:+3367738 | None:intergenic |
| GATTCGGTCTTGGCTTTGAA+AGG | 0.469967 | 4.3:-3364964 | MS.gene015852:CDS |
| CCGTCCTTTCGAGGAATACC+GGG | 0.472290 | 4.3:+3366580 | None:intergenic |
| GCCGTCTTCACGGCGGATGA+TGG | 0.473112 | 4.3:+3367748 | None:intergenic |
| CAGGCAAGAAAGCAAGAATC+GGG | 0.476509 | 4.3:-3367712 | MS.gene015852:CDS |
| TGTAGATCTTTCCACCAGCT+TGG | 0.481572 | 4.3:+3366609 | None:intergenic |
| ATTCCCTTCCCACGATATCC+TGG | 0.485303 | 4.3:-3364899 | MS.gene015852:CDS |
| AGGTCAATGTACCATTCATA+TGG | 0.485564 | 4.3:+3365016 | None:intergenic |
| AACCGGAAGAAAAGCCGATA+AGG | 0.487481 | 4.3:-3367678 | MS.gene015852:CDS |
| TGTATATGTAAGTCGAATGA+AGG | 0.488290 | 4.3:+3365962 | None:intergenic |
| GTTCAGTGAAGCAGAGAGGT+TGG | 0.488710 | 4.3:-3366800 | MS.gene015852:CDS |
| TTAGGCAAAGGATATTTAGC+AGG | 0.489337 | 4.3:+3367449 | None:intergenic |
| TCAACATCAGCTTCAGTTGG+AGG | 0.491857 | 4.3:+3366754 | None:intergenic |
| AAGCTTGTTGTTCAGGAGAA+GGG | 0.495167 | 4.3:-3366724 | MS.gene015852:CDS |
| GCTGAACAGGTTCTTCATGT+TGG | 0.497814 | 4.3:-3367482 | MS.gene015852:CDS |
| GGAACTTGTGTTGTTGTTGA+GGG | 0.498325 | 4.3:-3367554 | MS.gene015852:CDS |
| GGCGGATGATGGATTTGATC+AGG | 0.500013 | 4.3:+3367759 | None:intergenic |
| TGCAGATATCTGCTGTTGCT+CGG | 0.500801 | 4.3:-3366951 | MS.gene015852:intron |
| TACATTGACCTGAGGCGGTA+TGG | 0.502024 | 4.3:-3365004 | MS.gene015852:CDS |
| AATTCTCTGCACGAAATGTC+GGG | 0.502631 | 4.3:+3366446 | None:intergenic |
| AATCATAAATCTGCTCTGCC+AGG | 0.503281 | 4.3:+3364881 | None:intergenic |
| GGATAATTATAGACTATGAC+AGG | 0.507099 | 4.3:+3365619 | None:intergenic |
| ATCTGCAAAAGCAGATAAGA+AGG | 0.510339 | 4.3:-3366680 | MS.gene015852:CDS |
| CTTGGACAACTTGTTCAGAC+TGG | 0.510383 | 4.3:-3367575 | MS.gene015852:CDS |
| GACGGCGGATCAGGTTTAGC+AGG | 0.513325 | 4.3:-3367731 | MS.gene015852:CDS |
| GCAGGCAAGAAAGCAAGAAT+CGG | 0.515281 | 4.3:-3367713 | MS.gene015852:CDS |
| ATCTTCTGTTTCGCTCCAGA+AGG | 0.521124 | 4.3:+3367515 | None:intergenic |
| GCTTCAACATCAGCTTCAGT+TGG | 0.525178 | 4.3:+3366751 | None:intergenic |
| AAGCGTCGACGATAACTTGA+AGG | 0.525722 | 4.3:+3367609 | None:intergenic |
| AATTGCGTTTGCAGACTTGG+AGG | 0.525936 | 4.3:-3366377 | MS.gene015852:intron |
| TCCATCATCCGCCGTGAAGA+CGG | 0.526839 | 4.3:-3367749 | MS.gene015852:CDS |
| TAAGCTTGTTGTTCAGGAGA+AGG | 0.533592 | 4.3:-3366725 | MS.gene015852:CDS |
| TTGAACGACGGAAGCTGCGC+CGG | 0.541271 | 4.3:-3367635 | MS.gene015852:CDS |
| GAATTCTCTGCACGAAATGT+CGG | 0.541676 | 4.3:+3366445 | None:intergenic |
| CCGTGTTGGTTCTGGAACGA+AGG | 0.558261 | 4.3:+3367387 | None:intergenic |
| AGCTTGTTGTTCAGGAGAAG+GGG | 0.558894 | 4.3:-3366723 | MS.gene015852:CDS |
| TCTGCTCTGCCAGGATATCG+TGG | 0.559764 | 4.3:+3364890 | None:intergenic |
| AAAAGAAAATGTATCCAAGC+TGG | 0.561643 | 4.3:-3366623 | MS.gene015852:CDS |
| TTCTGTTTCGCTCCAGAAGG+AGG | 0.561830 | 4.3:+3367518 | None:intergenic |
| TGAAGCAGAGAGGTTGGAGA+AGG | 0.562538 | 4.3:-3366794 | MS.gene015852:CDS |
| GAATTCAGCTTTGGGAACCT+CGG | 0.563789 | 4.3:+3367793 | None:intergenic |
| CCCGGTATTCCTCGAAAGGA+CGG | 0.564925 | 4.3:-3366580 | MS.gene015852:CDS |
| TCAGGTTGGAGAGTTAATTG+GGG | 0.567841 | 4.3:-3365247 | MS.gene015852:intron |
| TGGATAATTGGTCGGATGAG+AGG | 0.571429 | 4.3:+3367822 | None:intergenic |
| TGGAACTTGTGTTGTTGTTG+AGG | 0.575683 | 4.3:-3367555 | MS.gene015852:CDS |
| ATTTAGCTTCTGAGCATGAA+AGG | 0.578456 | 4.3:-3365866 | MS.gene015852:intron |
| ACTAGTGATTGTGAGGGTGC+TGG | 0.579234 | 4.3:-3366847 | MS.gene015852:CDS |
| GTATATGTAAGTCGAATGAA+GGG | 0.579832 | 4.3:+3365963 | None:intergenic |
| ACATCAGCTTCAGTTGGAGG+CGG | 0.581956 | 4.3:+3366757 | None:intergenic |
| GGATTTGATCAGGACGCTGT+CGG | 0.584016 | 4.3:+3367769 | None:intergenic |
| CTGCCAGGATATCGTGGGAA+GGG | 0.584465 | 4.3:+3364896 | None:intergenic |
| AGAAAATGTATCCAAGCTGG+TGG | 0.588613 | 4.3:-3366620 | MS.gene015852:CDS |
| CTGGAAGAATCTGTGACGAA+TGG | 0.592469 | 4.3:-3365924 | MS.gene015852:CDS |
| TCCTCGAAAGGACGGAAAGG+TGG | 0.597542 | 4.3:-3366572 | MS.gene015852:CDS |
| CCAATTATCCACCGTAACCG+AGG | 0.603367 | 4.3:-3367810 | MS.gene015852:CDS |
| TATGGATGTTCTTGTGCCAA+AGG | 0.605646 | 4.3:-3365539 | MS.gene015852:intron |
| GAAGGAGATTAGTGCTGCTG+TGG | 0.610064 | 4.3:-3366662 | MS.gene015852:CDS |
| TCAGCCCGGTATTCCTCGAA+AGG | 0.611373 | 4.3:-3366584 | MS.gene015852:CDS |
| TATGGAACAGTGAAACATGC+CGG | 0.617944 | 4.3:-3364986 | MS.gene015852:CDS |
| GAAAGATCTACACTTCAGCC+CGG | 0.620865 | 4.3:-3366598 | MS.gene015852:CDS |
| CCATAAATTCCATATCCTCA+AGG | 0.622708 | 4.3:+3366039 | None:intergenic |
| TTTGAGAAAGAAGTAAAATG+GGG | 0.624348 | 4.3:-3365894 | MS.gene015852:CDS |
| CTGCTCTGCCAGGATATCGT+GGG | 0.624533 | 4.3:+3364891 | None:intergenic |
| CTTTGTTCAGTGAAGCAGAG+AGG | 0.632800 | 4.3:-3366804 | MS.gene015852:CDS |
| GTTATAATGTTACAGACTAG+AGG | 0.632976 | 4.3:-3365059 | MS.gene015852:intron |
| GGCAAGAAAGCAAGAATCGG+GGG | 0.633348 | 4.3:-3367710 | MS.gene015852:CDS |
| CAGGTTGGAGAGTTAATTGG+GGG | 0.635147 | 4.3:-3365246 | MS.gene015852:CDS |
| CCTTCGTTCCAGAACCAACA+CGG | 0.635811 | 4.3:-3367387 | MS.gene015852:intron |
| GCTTGTTGTTCAGGAGAAGG+GGG | 0.639836 | 4.3:-3366722 | MS.gene015852:CDS |
| TCTGCCAGGATATCGTGGGA+AGG | 0.640927 | 4.3:+3364895 | None:intergenic |
| GTTACTTGACAACTGCCTTG+AGG | 0.641332 | 4.3:-3366054 | MS.gene015852:CDS |
| GGTTACGGTGGATAATTGGT+CGG | 0.641687 | 4.3:+3367814 | None:intergenic |
| CTGTCTTTAGGTCATCATTG+AGG | 0.642743 | 4.3:+3365569 | None:intergenic |
| AATGGTACATTGACCTGAGG+CGG | 0.645218 | 4.3:-3365009 | MS.gene015852:CDS |
| ACTTACATATACAGAAGCTG+TGG | 0.652239 | 4.3:-3365952 | MS.gene015852:CDS |
| TATTCCTCGAAAGGACGGAA+AGG | 0.658806 | 4.3:-3366575 | MS.gene015852:CDS |
| ATCATCCGCCGTGAAGACGG+CGG | 0.659218 | 4.3:-3367746 | MS.gene015852:CDS |
| TGCCTGTTGAGCCATATGAA+TGG | 0.659840 | 4.3:-3365027 | MS.gene015852:CDS |
| TTTGGGAACCTCGGTTACGG+TGG | 0.663451 | 4.3:+3367802 | None:intergenic |
| GTTATGATGTCATTCAACAA+AGG | 0.665614 | 4.3:-3365206 | MS.gene015852:intron |
| AGCACCCTCACAATCACTAG+TGG | 0.672495 | 4.3:+3366849 | None:intergenic |
| AAGGTGAACGAAATCACGCA+AGG | 0.674910 | 4.3:+3367406 | None:intergenic |
| TGTCACCACTAGTGATTGTG+AGG | 0.675390 | 4.3:-3366854 | MS.gene015852:CDS |
| ATGAATGGTACATTGACCTG+AGG | 0.689555 | 4.3:-3365012 | MS.gene015852:CDS |
| AGGCAAGAAAGCAAGAATCG+GGG | 0.689745 | 4.3:-3367711 | MS.gene015852:CDS |
| CAATGATGACCTAAAGACAG+TGG | 0.699761 | 4.3:-3365566 | MS.gene015852:CDS |
| ATATGTAAGTCGAATGAAGG+GGG | 0.701471 | 4.3:+3365965 | None:intergenic |
| TATATGTAAGTCGAATGAAG+GGG | 0.702544 | 4.3:+3365964 | None:intergenic |
| GGATGATATGAAGTGCGCCG+AGG | 0.712177 | 4.3:-3366102 | MS.gene015852:CDS |
| CTGATCCGCCGTCTTCACGG+CGG | 0.741003 | 4.3:+3367741 | None:intergenic |
| GGTATGCAGATACCTAACAG+AGG | 0.750059 | 4.3:-3365656 | MS.gene015852:intron |
| GTCACCACTAGTGATTGTGA+GGG | 0.751157 | 4.3:-3366853 | MS.gene015852:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAATATAAAAAGTTAAATT+CGG | - | chr4.3:3365599-3365618 | MS.gene015852:CDS | 10.0% |
| !!! | TTATAATTTCGTTAATTTTA+GGG | - | chr4.3:3365510-3365529 | MS.gene015852:intron | 10.0% |
| !!! | TTTATAATTTCGTTAATTTT+AGG | - | chr4.3:3365509-3365528 | MS.gene015852:intron | 10.0% |
| !! | TAATTACCATAATTCTTATT+CGG | - | chr4.3:3365635-3365654 | MS.gene015852:CDS | 15.0% |
| !! | TTATAAAATAATCCCTAAAT+TGG | + | chr4.3:3365496-3365515 | None:intergenic | 15.0% |
| !!! | AATTCAAATACTGTTTTTTA+GGG | - | chr4.3:3366476-3366495 | MS.gene015852:CDS | 15.0% |
| !!! | TTTTTATGCATGTTATTATT+GGG | - | chr4.3:3365737-3365756 | MS.gene015852:intron | 15.0% |
| !!! | TTTTTTATGCATGTTATTAT+TGG | - | chr4.3:3365736-3365755 | MS.gene015852:intron | 15.0% |
| !! | AAACAACACAATTTAATAAG+AGG | + | chr4.3:3367021-3367040 | None:intergenic | 20.0% |
| !! | AACTACATATCAAACTATTA+AGG | - | chr4.3:3367314-3367333 | MS.gene015852:intron | 20.0% |
| !! | AATTTGAGAAAGAAGTAAAA+TGG | - | chr4.3:3366817-3366836 | MS.gene015852:CDS | 20.0% |
| !! | ATTTAATAAGAGGAATGATA+AGG | + | chr4.3:3367011-3367030 | None:intergenic | 20.0% |
| !! | ATTTGAGAAAGAAGTAAAAT+GGG | - | chr4.3:3366818-3366837 | MS.gene015852:CDS | 20.0% |
| !! | CATGTTAAAACAAAATATAC+AGG | + | chr4.3:3367207-3367226 | None:intergenic | 20.0% |
| !! | TAATATTTGCATTATTGTGT+AGG | - | chr4.3:3366590-3366609 | MS.gene015852:CDS | 20.0% |
| !! | TATTTATGAATTAGTGTAAG+CGG | + | chr4.3:3367546-3367565 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTTAACATGTCTA+TGG | - | chr4.3:3367211-3367230 | MS.gene015852:intron | 20.0% |
| !!! | CAATTCAAATACTGTTTTTT+AGG | - | chr4.3:3366475-3366494 | MS.gene015852:CDS | 20.0% |
| !!! | GTGTTTTTTACGATTAATAT+TGG | - | chr4.3:3366913-3366932 | MS.gene015852:CDS | 20.0% |
| !!! | TACAATTTTAAGGATTGAAT+AGG | - | chr4.3:3365551-3365570 | MS.gene015852:CDS | 20.0% |
| !!! | TTTGTTATAAACCACATTAT+CGG | - | chr4.3:3366444-3366463 | MS.gene015852:CDS | 20.0% |
| ! | ACAGAAAAATCCTTTACAAA+AGG | + | chr4.3:3367594-3367613 | None:intergenic | 25.0% |
| ! | ACATTATAACAGTAGAAACA+AGG | + | chr4.3:3367644-3367663 | None:intergenic | 25.0% |
| ! | AGAATTATGGTAATTACCAA+AGG | + | chr4.3:3365631-3365650 | None:intergenic | 25.0% |
| ! | CATAATTCTTATTCGGAATT+GGG | - | chr4.3:3365642-3365661 | MS.gene015852:CDS | 25.0% |
| ! | TCATCATTACTATACACAAT+TGG | + | chr4.3:3365396-3365415 | None:intergenic | 25.0% |
| ! | TTTGAGAAAGAAGTAAAATG+GGG | - | chr4.3:3366819-3366838 | MS.gene015852:CDS | 25.0% |
| !! | TTGGAACACATTAGTTTATT+TGG | + | chr4.3:3365468-3365487 | None:intergenic | 25.0% |
| !!! | AGTTTTTGAAATTGTCTTGA+AGG | + | chr4.3:3365433-3365452 | None:intergenic | 25.0% |
| !!! | ATACATTTTTCAACAAGCAT+GGG | - | chr4.3:3365813-3365832 | MS.gene015852:intron | 25.0% |
| !!! | ATTTCCTGTTGTTGTTTTAT+TGG | + | chr4.3:3365584-3365603 | None:intergenic | 25.0% |
| !!! | GTTTTTGAAATTGTCTTGAA+GGG | + | chr4.3:3365432-3365451 | None:intergenic | 25.0% |
| !!! | TAGAATGCTTTGATTTCTTT+TGG | + | chr4.3:3367118-3367137 | None:intergenic | 25.0% |
| AAAAGAAAATGTATCCAAGC+TGG | - | chr4.3:3366090-3366109 | MS.gene015852:CDS | 30.0% | |
| AATCCCTAAATTGGAAATCT+TGG | + | chr4.3:3365487-3365506 | None:intergenic | 30.0% | |
| ATATACAGGATACATACCTT+TGG | + | chr4.3:3367193-3367212 | None:intergenic | 30.0% | |
| CAAAAATTTCACATATGCCT+CGG | + | chr4.3:3366631-3366650 | None:intergenic | 30.0% | |
| CCAATTCCGAATAAGAATTA+TGG | + | chr4.3:3365644-3365663 | None:intergenic | 30.0% | |
| CCATAATTCTTATTCGGAAT+TGG | - | chr4.3:3365641-3365660 | MS.gene015852:CDS | 30.0% | |
| GGATAATTATAGACTATGAC+AGG | + | chr4.3:3367097-3367116 | None:intergenic | 30.0% | |
| GTATATGTAAGTCGAATGAA+GGG | + | chr4.3:3366753-3366772 | None:intergenic | 30.0% | |
| GTTATAATGTTACAGACTAG+AGG | - | chr4.3:3367654-3367673 | MS.gene015852:CDS | 30.0% | |
| GTTATGATGTCATTCAACAA+AGG | - | chr4.3:3367507-3367526 | MS.gene015852:CDS | 30.0% | |
| GTTCCAAGATTTCCAATTTA+GGG | - | chr4.3:3365481-3365500 | MS.gene015852:intron | 30.0% | |
| TAATAAGAGGAATGATAAGG+TGG | + | chr4.3:3367008-3367027 | None:intergenic | 30.0% | |
| TATATGTAAGTCGAATGAAG+GGG | + | chr4.3:3366752-3366771 | None:intergenic | 30.0% | |
| TGTATATGTAAGTCGAATGA+AGG | + | chr4.3:3366754-3366773 | None:intergenic | 30.0% | |
| TGTTCCAAGATTTCCAATTT+AGG | - | chr4.3:3365480-3365499 | MS.gene015852:intron | 30.0% | |
| TTAAATTCGGAATGAACCTT+TGG | - | chr4.3:3365612-3365631 | MS.gene015852:CDS | 30.0% | |
| TTACTTATATGACACTGAGT+GGG | - | chr4.3:3367371-3367390 | MS.gene015852:intron | 30.0% | |
| TTTACTTATATGACACTGAG+TGG | - | chr4.3:3367370-3367389 | MS.gene015852:intron | 30.0% | |
| ! | ATGTGAAATTTTTGTGTCAG+TGG | - | chr4.3:3366637-3366656 | MS.gene015852:CDS | 30.0% |
| ! | GTAAAGGATTTTTCTGTTCA+TGG | - | chr4.3:3367597-3367616 | MS.gene015852:CDS | 30.0% |
| ! | TACTGTGTTTCCTTTTGTAA+AGG | - | chr4.3:3367581-3367600 | MS.gene015852:CDS | 30.0% |
| ! | TCACATCTCTAATATTTTCC+AGG | + | chr4.3:3367795-3367814 | None:intergenic | 30.0% |
| ! | TTGCATTGATCGTTTGAAAA+TGG | - | chr4.3:3366716-3366735 | MS.gene015852:CDS | 30.0% |
| !! | CATACATTTTTCAACAAGCA+TGG | - | chr4.3:3365812-3365831 | MS.gene015852:intron | 30.0% |
| AAAAAAGAAGCTTACCGTGT+TGG | + | chr4.3:3365343-3365362 | None:intergenic | 35.0% | |
| AAACAGTCAAAAACGCTTGA+CGG | + | chr4.3:3366189-3366208 | None:intergenic | 35.0% | |
| AATTGTAGAGACCAGACAAT+TGG | + | chr4.3:3365538-3365557 | None:intergenic | 35.0% | |
| ACTTACATATACAGAAGCTG+TGG | - | chr4.3:3366761-3366780 | MS.gene015852:CDS | 35.0% | |
| AGGTCAATGTACCATTCATA+TGG | + | chr4.3:3367700-3367719 | None:intergenic | 35.0% | |
| ATATGTAAGTCGAATGAAGG+GGG | + | chr4.3:3366751-3366770 | None:intergenic | 35.0% | |
| ATCTGCAAAAGCAGATAAGA+AGG | - | chr4.3:3366033-3366052 | MS.gene015852:CDS | 35.0% | |
| ATGTTACAGACTAGAGGATA+TGG | - | chr4.3:3367660-3367679 | MS.gene015852:CDS | 35.0% | |
| ATTGTAGAGACCAGACAATT+GGG | + | chr4.3:3365537-3365556 | None:intergenic | 35.0% | |
| CCATAAATTCCATATCCTCA+AGG | + | chr4.3:3366677-3366696 | None:intergenic | 35.0% | |
| CCTTGAGGATATGGAATTTA+TGG | - | chr4.3:3366674-3366693 | MS.gene015852:CDS | 35.0% | |
| CTCACCAATAAAACAACAAC+AGG | - | chr4.3:3365577-3365596 | MS.gene015852:CDS | 35.0% | |
| CTTGGGAAAAGAACTATAGA+AGG | - | chr4.3:3367236-3367255 | MS.gene015852:intron | 35.0% | |
| GAACGTGTAACTGTAATTTC+AGG | - | chr4.3:3367448-3367467 | MS.gene015852:CDS | 35.0% | |
| GCAACCTTTATCAAACTTGT+CGG | + | chr4.3:3366700-3366719 | None:intergenic | 35.0% | |
| TACTTATATGACACTGAGTG+GGG | - | chr4.3:3367372-3367391 | MS.gene015852:intron | 35.0% | |
| TTAACATGTCTATGGTGCTT+GGG | - | chr4.3:3367219-3367238 | MS.gene015852:intron | 35.0% | |
| TTAGGCAAAGGATATTTAGC+AGG | + | chr4.3:3365267-3365286 | None:intergenic | 35.0% | |
| TTTAACATGTCTATGGTGCT+TGG | - | chr4.3:3367218-3367237 | MS.gene015852:intron | 35.0% | |
| ! | AGGATGATTCTTTTTGCAAC+CGG | - | chr4.3:3367769-3367788 | MS.gene015852:CDS | 35.0% |
| ! | ATCTCTAATATTTTCCAGGC+CGG | + | chr4.3:3367791-3367810 | None:intergenic | 35.0% |
| ! | ATTTAGCTTCTGAGCATGAA+AGG | - | chr4.3:3366847-3366866 | MS.gene015852:CDS | 35.0% |
| ! | GTCTGGTCTCTACAATTTTA+AGG | - | chr4.3:3365541-3365560 | MS.gene015852:CDS | 35.0% |
| ! | GTGTAACTGTAATTTCAGGT+TGG | - | chr4.3:3367452-3367471 | MS.gene015852:CDS | 35.0% |
| !! | ATTGTGTTGTTTGATGCCTT+TGG | - | chr4.3:3367029-3367048 | MS.gene015852:intron | 35.0% |
| !! | TTCAGGTTGGAGAGTTAATT+GGG | - | chr4.3:3367465-3367484 | MS.gene015852:CDS | 35.0% |
| !! | TTGTGTTGTTTGATGCCTTT+GGG | - | chr4.3:3367030-3367049 | MS.gene015852:intron | 35.0% |
| !! | TTTCAGGTTGGAGAGTTAAT+TGG | - | chr4.3:3367464-3367483 | MS.gene015852:CDS | 35.0% |
| AACAGTCAAAAACGCTTGAC+GGG | + | chr4.3:3366188-3366207 | None:intergenic | 40.0% | |
| AAGTCTGCAAACGCAATTTC+AGG | + | chr4.3:3366334-3366353 | None:intergenic | 40.0% | |
| AATTCTCTGCACGAAATGTC+GGG | + | chr4.3:3366270-3366289 | None:intergenic | 40.0% | |
| ACACCAACCACAAAAGCAAT+TGG | + | chr4.3:3367423-3367442 | None:intergenic | 40.0% | |
| ACACTGCTTACTATGATGGT+AGG | + | chr4.3:3367262-3367281 | None:intergenic | 40.0% | |
| AGAAAATGTATCCAAGCTGG+TGG | - | chr4.3:3366093-3366112 | MS.gene015852:CDS | 40.0% | |
| ATCTGCATACCATAACCCAA+AGG | + | chr4.3:3367048-3367067 | None:intergenic | 40.0% | |
| ATGAATGGTACATTGACCTG+AGG | - | chr4.3:3367701-3367720 | MS.gene015852:CDS | 40.0% | |
| ATGGCCGACAAGTTTGATAA+AGG | - | chr4.3:3366693-3366712 | MS.gene015852:CDS | 40.0% | |
| CAATCACTAGTGGTGACAAT+TGG | + | chr4.3:3365857-3365876 | None:intergenic | 40.0% | |
| CAATGATGACCTAAAGACAG+TGG | - | chr4.3:3367147-3367166 | MS.gene015852:intron | 40.0% | |
| CACCAACCACAAAAGCAATT+GGG | + | chr4.3:3367422-3367441 | None:intergenic | 40.0% | |
| CTGTCTTTAGGTCATCATTG+AGG | + | chr4.3:3367147-3367166 | None:intergenic | 40.0% | |
| CTTAGTCGCGTGTATACATT+TGG | - | chr4.3:3366244-3366263 | MS.gene015852:intron | 40.0% | |
| GAATTCTCTGCACGAAATGT+CGG | + | chr4.3:3366271-3366290 | None:intergenic | 40.0% | |
| GACGATAACTTGAAGGTTAC+CGG | + | chr4.3:3365100-3365119 | None:intergenic | 40.0% | |
| GGATATTTAGCAGGATCAAC+AGG | + | chr4.3:3365258-3365277 | None:intergenic | 40.0% | |
| GTCTACACTGCTTACTATGA+TGG | + | chr4.3:3367266-3367285 | None:intergenic | 40.0% | |
| TACAGAAGCTGTGGAAATAC+TGG | - | chr4.3:3366770-3366789 | MS.gene015852:CDS | 40.0% | |
| TACCATTCATATGGCTCAAC+AGG | + | chr4.3:3367691-3367710 | None:intergenic | 40.0% | |
| TATGGAACAGTGAAACATGC+CGG | - | chr4.3:3367727-3367746 | MS.gene015852:CDS | 40.0% | |
| TATGGATGTTCTTGTGCCAA+AGG | - | chr4.3:3367174-3367193 | MS.gene015852:intron | 40.0% | |
| TCCGTCGTTCAATTCCAAAA+AGG | + | chr4.3:3365070-3365089 | None:intergenic | 40.0% | |
| TCTGATACTTCACCTCTGTT+AGG | + | chr4.3:3367072-3367091 | None:intergenic | 40.0% | |
| TGAAATTGCGTTTGCAGACT+TGG | - | chr4.3:3366333-3366352 | MS.gene015852:intron | 40.0% | |
| ! | GCATTTGGCTGAATTTTGGA+TGG | - | chr4.3:3366303-3366322 | MS.gene015852:intron | 40.0% |
| ! | GGAACTTGTGTTGTTGTTGA+GGG | - | chr4.3:3365159-3365178 | MS.gene015852:intron | 40.0% |
| ! | TGGAACTTGTGTTGTTGTTG+AGG | - | chr4.3:3365158-3365177 | MS.gene015852:intron | 40.0% |
| ! | TGTTTGATGCCTTTGGGTTA+TGG | - | chr4.3:3367036-3367055 | MS.gene015852:intron | 40.0% |
| !! | AAGCTTGTTGTTCAGGAGAA+GGG | - | chr4.3:3365989-3366008 | MS.gene015852:CDS | 40.0% |
| !! | ATTTTAGGGACCCAATTGTC+TGG | - | chr4.3:3365524-3365543 | MS.gene015852:intron | 40.0% |
| !! | CAAGCGTTTTTGACTGTTTC+TGG | - | chr4.3:3366190-3366209 | MS.gene015852:intron | 40.0% |
| !! | CTGTTACTTTCGTGAATGTG+TGG | - | chr4.3:3366936-3366955 | MS.gene015852:CDS | 40.0% |
| !! | GCTTTTGTGGTTGGTGTAAT+AGG | - | chr4.3:3367426-3367445 | MS.gene015852:CDS | 40.0% |
| !! | GTTACACCCAATTGCTTTTG+TGG | - | chr4.3:3367413-3367432 | MS.gene015852:CDS | 40.0% |
| !! | TAAGCTTGTTGTTCAGGAGA+AGG | - | chr4.3:3365988-3366007 | MS.gene015852:CDS | 40.0% |
| !! | TCAGGTTGGAGAGTTAATTG+GGG | - | chr4.3:3367466-3367485 | MS.gene015852:CDS | 40.0% |
| !!! | GCCTTTTTGGAATTGAACGA+CGG | - | chr4.3:3365066-3365085 | MS.gene015852:intron | 40.0% |
| !!! | TCAAGAGTGAGTCTGGTTTT+AGG | + | chr4.3:3365285-3365304 | None:intergenic | 40.0% |
| AACCGGAAGAAAAGCCGATA+AGG | - | chr4.3:3365035-3365054 | MS.gene015852:CDS | 45.0% | |
| AAGCACCAACCATAGGAGTA+GGG | + | chr4.3:3366547-3366566 | None:intergenic | 45.0% | |
| AAGGTGAACGAAATCACGCA+AGG | + | chr4.3:3365310-3365329 | None:intergenic | 45.0% | |
| AATGGTACATTGACCTGAGG+CGG | - | chr4.3:3367704-3367723 | MS.gene015852:CDS | 45.0% | |
| AATTGCGTTTGCAGACTTGG+AGG | - | chr4.3:3366336-3366355 | MS.gene015852:intron | 45.0% | |
| ACAGTGAAACATGCCGGATT+CGG | - | chr4.3:3367733-3367752 | MS.gene015852:CDS | 45.0% | |
| AGAGGAATGATAAGGTGGCT+TGG | + | chr4.3:3367003-3367022 | None:intergenic | 45.0% | |
| AGGCAAGAAAGCAAGAATCG+GGG | - | chr4.3:3365002-3365021 | MS.gene015852:CDS | 45.0% | |
| AGTTAATTGGGGGAAGCCAA+AGG | - | chr4.3:3367477-3367496 | MS.gene015852:CDS | 45.0% | |
| ATCTTCTGTTTCGCTCCAGA+AGG | + | chr4.3:3365201-3365220 | None:intergenic | 45.0% | |
| CAAGGATTCAAGAGTGAGTC+TGG | + | chr4.3:3365292-3365311 | None:intergenic | 45.0% | |
| CAGAGAATTCTCACACTTCC+AGG | - | chr4.3:3366281-3366300 | MS.gene015852:intron | 45.0% | |
| CAGGCAAGAAAGCAAGAATC+GGG | - | chr4.3:3365001-3365020 | MS.gene015852:CDS | 45.0% | |
| CATCTCAAACTTCCTCCTTC+TGG | - | chr4.3:3365183-3365202 | MS.gene015852:intron | 45.0% | |
| CCAAAATTCAGCCAAATGCC+TGG | + | chr4.3:3366302-3366321 | None:intergenic | 45.0% | |
| CTGGAAGAATCTGTGACGAA+TGG | - | chr4.3:3366789-3366808 | MS.gene015852:CDS | 45.0% | |
| CTGTCGGAGAATTCAGCTTT+GGG | + | chr4.3:3364931-3364950 | None:intergenic | 45.0% | |
| CTTTGTTCAGTGAAGCAGAG+AGG | - | chr4.3:3365909-3365928 | MS.gene015852:CDS | 45.0% | |
| GAAAGATCTACACTTCAGCC+CGG | - | chr4.3:3366115-3366134 | MS.gene015852:intron | 45.0% | |
| GCAGGCAAGAAAGCAAGAAT+CGG | - | chr4.3:3365000-3365019 | MS.gene015852:CDS | 45.0% | |
| GCTGAACAGGTTCTTCATGT+TGG | - | chr4.3:3365231-3365250 | MS.gene015852:CDS | 45.0% | |
| GCTTCAACATCAGCTTCAGT+TGG | + | chr4.3:3365965-3365984 | None:intergenic | 45.0% | |
| GGTATGCAGATACCTAACAG+AGG | - | chr4.3:3367057-3367076 | MS.gene015852:intron | 45.0% | |
| GGTTACGGTGGATAATTGGT+CGG | + | chr4.3:3364902-3364921 | None:intergenic | 45.0% | |
| GTCACCACTAGTGATTGTGA+GGG | - | chr4.3:3365860-3365879 | MS.gene015852:intron | 45.0% | |
| GTTAATTGGGGGAAGCCAAA+GGG | - | chr4.3:3367478-3367497 | MS.gene015852:CDS | 45.0% | |
| GTTACTTGACAACTGCCTTG+AGG | - | chr4.3:3366659-3366678 | MS.gene015852:CDS | 45.0% | |
| TATCTGCTGTTGCTCGGATT+CGG | - | chr4.3:3365768-3365787 | MS.gene015852:intron | 45.0% | |
| TATTCCTCGAAAGGACGGAA+AGG | - | chr4.3:3366138-3366157 | MS.gene015852:intron | 45.0% | |
| TCAACATCAGCTTCAGTTGG+AGG | + | chr4.3:3365962-3365981 | None:intergenic | 45.0% | |
| TGACAACTGCCTTGAGGATA+TGG | - | chr4.3:3366665-3366684 | MS.gene015852:CDS | 45.0% | |
| TGCAGATATCTGCTGTTGCT+CGG | - | chr4.3:3365762-3365781 | MS.gene015852:intron | 45.0% | |
| TGCCTGTTGAGCCATATGAA+TGG | - | chr4.3:3367686-3367705 | MS.gene015852:CDS | 45.0% | |
| TGGATAATTGGTCGGATGAG+AGG | + | chr4.3:3364894-3364913 | None:intergenic | 45.0% | |
| TGTAGATCTTTCCACCAGCT+TGG | + | chr4.3:3366107-3366126 | None:intergenic | 45.0% | |
| TGTCACCACTAGTGATTGTG+AGG | - | chr4.3:3365859-3365878 | MS.gene015852:intron | 45.0% | |
| TTCAAAGCCAAGACCGAATC+CGG | + | chr4.3:3367749-3367768 | None:intergenic | 45.0% | |
| TTCTCACACTTCCAGGCATT+TGG | - | chr4.3:3366288-3366307 | MS.gene015852:intron | 45.0% | |
| TTGACACTCAGCCGATAATG+TGG | + | chr4.3:3366458-3366477 | None:intergenic | 45.0% | |
| ! | AAAGCACCAACCATAGGAGT+AGG | + | chr4.3:3366548-3366567 | None:intergenic | 45.0% |
| ! | CAGGTTGGAGAGTTAATTGG+GGG | - | chr4.3:3367467-3367486 | MS.gene015852:CDS | 45.0% |
| ! | CCAGGCATTTGGCTGAATTT+TGG | - | chr4.3:3366299-3366318 | MS.gene015852:intron | 45.0% |
| ! | CTTGGACAACTTGTTCAGAC+TGG | - | chr4.3:3365138-3365157 | MS.gene015852:intron | 45.0% |
| ! | TAAGGACGCTTTCGCCTTTT+TGG | - | chr4.3:3365053-3365072 | MS.gene015852:intron | 45.0% |
| !! | AAAGGCGAAAGCGTCCTTAT+CGG | + | chr4.3:3365052-3365071 | None:intergenic | 45.0% |
| !! | AAGCGTCGACGATAACTTGA+AGG | + | chr4.3:3365107-3365126 | None:intergenic | 45.0% |
| !! | ACAGCAAAAGCACCAACCAT+AGG | + | chr4.3:3366554-3366573 | None:intergenic | 45.0% |
| !! | AGCTGCTAAGCTTGTTGTTC+AGG | - | chr4.3:3365982-3366001 | MS.gene015852:CDS | 45.0% |
| !! | AGCTTGTTGTTCAGGAGAAG+GGG | - | chr4.3:3365990-3366009 | MS.gene015852:CDS | 45.0% |
| !! | CACCCAATTGCTTTTGTGGT+TGG | - | chr4.3:3367417-3367436 | MS.gene015852:CDS | 45.0% |
| !! | GAATTCAGCTTTGGGAACCT+CGG | + | chr4.3:3364923-3364942 | None:intergenic | 45.0% |
| !! | GATTCGGTCTTGGCTTTGAA+AGG | - | chr4.3:3367749-3367768 | MS.gene015852:CDS | 45.0% |
| !! | TATGGTTGGTGCTTTTGCTG+TGG | - | chr4.3:3366553-3366572 | MS.gene015852:CDS | 45.0% |
| !!! | GTCCTTATCGGCTTTTCTTC+CGG | + | chr4.3:3365040-3365059 | None:intergenic | 45.0% |
| !!! | GTGAGTCTGGTTTTAGGCAA+AGG | + | chr4.3:3365279-3365298 | None:intergenic | 45.0% |
| ACATCAGCTTCAGTTGGAGG+CGG | + | chr4.3:3365959-3365978 | None:intergenic | 50.0% | |
| AGAAAGCAAGAATCGGGGGA+TGG | - | chr4.3:3365007-3365026 | MS.gene015852:CDS | 50.0% | |
| AGCACCAACCATAGGAGTAG+GGG | + | chr4.3:3366546-3366565 | None:intergenic | 50.0% | |
| AGCACCCTCACAATCACTAG+TGG | + | chr4.3:3365867-3365886 | None:intergenic | 50.0% | |
| ATTCCCTTCCCACGATATCC+TGG | - | chr4.3:3367814-3367833 | MS.gene015852:CDS | 50.0% | |
| CAACTTCACCCCTACTCCTA+TGG | - | chr4.3:3366535-3366554 | MS.gene015852:CDS | 50.0% | |
| CATAGGAGTAGGGGTGAAGT+TGG | + | chr4.3:3366537-3366556 | None:intergenic | 50.0% | |
| CATCATAACGCTCCTCCCTT+TGG | + | chr4.3:3367496-3367515 | None:intergenic | 50.0% | |
| CCAATTATCCACCGTAACCG+AGG | - | chr4.3:3364903-3364922 | MS.gene015852:CDS | 50.0% | |
| CCATAGCAGCCACTGTCTTT+AGG | + | chr4.3:3367159-3367178 | None:intergenic | 50.0% | |
| CCTAAAGACAGTGGCTGCTA+TGG | - | chr4.3:3367156-3367175 | MS.gene015852:intron | 50.0% | |
| CCTCGGTTACGGTGGATAAT+TGG | + | chr4.3:3364906-3364925 | None:intergenic | 50.0% | |
| CCTTCGTTCCAGAACCAACA+CGG | - | chr4.3:3365326-3365345 | MS.gene015852:intron | 50.0% | |
| GAAAGCAAGAATCGGGGGAT+GGG | - | chr4.3:3365008-3365027 | MS.gene015852:CDS | 50.0% | |
| GCTGTCGGAGAATTCAGCTT+TGG | + | chr4.3:3364932-3364951 | None:intergenic | 50.0% | |
| GGATTTGATCAGGACGCTGT+CGG | + | chr4.3:3364947-3364966 | None:intergenic | 50.0% | |
| GGCAAGAAAGCAAGAATCGG+GGG | - | chr4.3:3365003-3365022 | MS.gene015852:CDS | 50.0% | |
| GTTCAGTGAAGCAGAGAGGT+TGG | - | chr4.3:3365913-3365932 | MS.gene015852:CDS | 50.0% | |
| TACATTGACCTGAGGCGGTA+TGG | - | chr4.3:3367709-3367728 | MS.gene015852:CDS | 50.0% | |
| TCCGTCCTTTCGAGGAATAC+CGG | + | chr4.3:3366137-3366156 | None:intergenic | 50.0% | |
| TGAAGCAGAGAGGTTGGAGA+AGG | - | chr4.3:3365919-3365938 | MS.gene015852:CDS | 50.0% | |
| TTCACCCCTACTCCTATGGT+TGG | - | chr4.3:3366539-3366558 | MS.gene015852:CDS | 50.0% | |
| TTCTGTTTCGCTCCAGAAGG+AGG | + | chr4.3:3365198-3365217 | None:intergenic | 50.0% | |
| ! | AAACATGCCGGATTCGGTCT+TGG | - | chr4.3:3367739-3367758 | MS.gene015852:CDS | 50.0% |
| ! | ACTAGTGATTGTGAGGGTGC+TGG | - | chr4.3:3365866-3365885 | MS.gene015852:intron | 50.0% |
| ! | CTTTGCATCGACACTCAGTC+TGG | + | chr4.3:3365685-3365704 | None:intergenic | 50.0% |
| ! | GAAGGAGATTAGTGCTGCTG+TGG | - | chr4.3:3366051-3366070 | MS.gene015852:CDS | 50.0% |
| ! | GATTCTTTTTGCAACCGGCC+TGG | - | chr4.3:3367774-3367793 | MS.gene015852:CDS | 50.0% |
| ! | GGAATGATAAGGTGGCTTGG+TGG | + | chr4.3:3367000-3367019 | None:intergenic | 50.0% |
| !! | AGCTTTGGGAACCTCGGTTA+CGG | + | chr4.3:3364917-3364936 | None:intergenic | 50.0% |
| !! | AGGTGGCTTGGTGGTTGAAT+AGG | + | chr4.3:3366991-3367010 | None:intergenic | 50.0% |
| !! | CAGACTGAGTGTCGATGCAA+AGG | - | chr4.3:3365683-3365702 | MS.gene015852:intron | 50.0% |
| !! | GAAGCTTACCGTGTTGGTTC+TGG | + | chr4.3:3365337-3365356 | None:intergenic | 50.0% |
| !! | GCTTGTTGTTCAGGAGAAGG+GGG | - | chr4.3:3365991-3366010 | MS.gene015852:CDS | 50.0% |
| !! | GGCGGATGATGGATTTGATC+AGG | + | chr4.3:3364957-3364976 | None:intergenic | 50.0% |
| !! | GGTGGCTTGGTGGTTGAATA+GGG | + | chr4.3:3366990-3367009 | None:intergenic | 50.0% |
| AACCTGATCCGCCGTCTTCA+CGG | + | chr4.3:3364978-3364997 | None:intergenic | 55.0% | |
| AATTGGGGGAAGCCAAAGGG+AGG | - | chr4.3:3367481-3367500 | MS.gene015852:CDS | 55.0% | |
| ATCGGGGGATGGGTGAAAAC+CGG | - | chr4.3:3365018-3365037 | MS.gene015852:CDS | 55.0% | |
| CCCGGTATTCCTCGAAAGGA+CGG | - | chr4.3:3366133-3366152 | MS.gene015852:intron | 55.0% | |
| CCGTCCTTTCGAGGAATACC+GGG | + | chr4.3:3366136-3366155 | None:intergenic | 55.0% | |
| CTGCCAGGATATCGTGGGAA+GGG | + | chr4.3:3367820-3367839 | None:intergenic | 55.0% | |
| CTGCTCTGCCAGGATATCGT+GGG | + | chr4.3:3367825-3367844 | None:intergenic | 55.0% | |
| GGATGATATGAAGTGCGCCG+AGG | - | chr4.3:3366611-3366630 | MS.gene015852:CDS | 55.0% | |
| TCACTGTTCCATACCGCCTC+AGG | + | chr4.3:3367720-3367739 | None:intergenic | 55.0% | |
| TCAGCCCGGTATTCCTCGAA+AGG | - | chr4.3:3366129-3366148 | MS.gene015852:intron | 55.0% | |
| TCCACCTTTCCGTCCTTTCG+AGG | + | chr4.3:3366145-3366164 | None:intergenic | 55.0% | |
| TCCATCATCCGCCGTGAAGA+CGG | - | chr4.3:3364964-3364983 | MS.gene015852:CDS | 55.0% | |
| TCCTCGAAAGGACGGAAAGG+TGG | - | chr4.3:3366141-3366160 | MS.gene015852:intron | 55.0% | |
| TCTGCCAGGATATCGTGGGA+AGG | + | chr4.3:3367821-3367840 | None:intergenic | 55.0% | |
| TCTGCTCTGCCAGGATATCG+TGG | + | chr4.3:3367826-3367845 | None:intergenic | 55.0% | |
| TGAATAGGGCGGAGCAGCAA+AGG | + | chr4.3:3366976-3366995 | None:intergenic | 55.0% | |
| TGTTGTTCAGGAGAAGGGGG+AGG | - | chr4.3:3365994-3366013 | MS.gene015852:CDS | 55.0% | |
| TTTGGGAACCTCGGTTACGG+TGG | + | chr4.3:3364914-3364933 | None:intergenic | 55.0% | |
| ! | GACGCTTCGCTTGCTGATCT+TGG | - | chr4.3:3365120-3365139 | MS.gene015852:intron | 55.0% |
| !! | CCGTGTTGGTTCTGGAACGA+AGG | + | chr4.3:3365329-3365348 | None:intergenic | 55.0% |
| !! | GGCTTGGTGGTTGAATAGGG+CGG | + | chr4.3:3366987-3367006 | None:intergenic | 55.0% |
| ATCATCCGCCGTGAAGACGG+CGG | - | chr4.3:3364967-3364986 | MS.gene015852:CDS | 60.0% | |
| GACGGCGGATCAGGTTTAGC+AGG | - | chr4.3:3364982-3365001 | MS.gene015852:CDS | 60.0% | |
| GATCGAGCTTCGCGCTGAAC+AGG | - | chr4.3:3365218-3365237 | MS.gene015852:CDS | 60.0% | |
| GGCGGAGCAGCAAAGGACAT+GGG | + | chr4.3:3366969-3366988 | None:intergenic | 60.0% | |
| TTGAACGACGGAAGCTGCGC+CGG | - | chr4.3:3365078-3365097 | MS.gene015852:intron | 60.0% | |
| CTGATCCGCCGTCTTCACGG+CGG | + | chr4.3:3364975-3364994 | None:intergenic | 65.0% | |
| GCCGTCTTCACGGCGGATGA+TGG | + | chr4.3:3364968-3364987 | None:intergenic | 65.0% | |
| GGGCGGAGCAGCAAAGGACA+TGG | + | chr4.3:3366970-3366989 | None:intergenic | 65.0% | |
| CGCCGTGAAGACGGCGGATC+AGG | - | chr4.3:3364973-3364992 | MS.gene015852:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 3364883 | 3367852 | 3364883 | ID=MS.gene015852 |
| chr4.3 | mRNA | 3364883 | 3367852 | 3364883 | ID=MS.gene015852.t1;Parent=MS.gene015852 |
| chr4.3 | exon | 3367388 | 3367852 | 3367388 | ID=MS.gene015852.t1.exon1;Parent=MS.gene015852.t1 |
| chr4.3 | CDS | 3367388 | 3367852 | 3367388 | ID=cds.MS.gene015852.t1;Parent=MS.gene015852.t1 |
| chr4.3 | exon | 3366378 | 3366968 | 3366378 | ID=MS.gene015852.t1.exon2;Parent=MS.gene015852.t1 |
| chr4.3 | CDS | 3366378 | 3366968 | 3366378 | ID=cds.MS.gene015852.t1;Parent=MS.gene015852.t1 |
| chr4.3 | exon | 3365867 | 3366123 | 3365867 | ID=MS.gene015852.t1.exon3;Parent=MS.gene015852.t1 |
| chr4.3 | CDS | 3365867 | 3366123 | 3365867 | ID=cds.MS.gene015852.t1;Parent=MS.gene015852.t1 |
| chr4.3 | exon | 3365540 | 3365669 | 3365540 | ID=MS.gene015852.t1.exon4;Parent=MS.gene015852.t1 |
| chr4.3 | CDS | 3365540 | 3365669 | 3365540 | ID=cds.MS.gene015852.t1;Parent=MS.gene015852.t1 |
| chr4.3 | exon | 3365207 | 3365265 | 3365207 | ID=MS.gene015852.t1.exon5;Parent=MS.gene015852.t1 |
| chr4.3 | CDS | 3365207 | 3365265 | 3365207 | ID=cds.MS.gene015852.t1;Parent=MS.gene015852.t1 |
| chr4.3 | exon | 3364883 | 3365066 | 3364883 | ID=MS.gene015852.t1.exon6;Parent=MS.gene015852.t1 |
| chr4.3 | CDS | 3364883 | 3365066 | 3364883 | ID=cds.MS.gene015852.t1;Parent=MS.gene015852.t1 |
| Gene Sequence |
| Protein sequence |
