AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene017011

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017011.t1 MTR_5g090120 98.308 591 9 1 1 591 1 590 0.0 1157
MS.gene017011.t1 MTR_3g449250 77.283 427 94 1 40 463 46 472 0.0 677
MS.gene017011.t1 MTR_3g449250 77.283 427 94 1 40 463 46 472 0.0 677
MS.gene017011.t1 MTR_1g102410 42.640 394 197 6 82 450 45 434 1.07e-94 303
MS.gene017011.t1 MTR_6g056080 43.229 384 203 8 77 450 99 477 4.66e-90 292
MS.gene017011.t1 MTR_2g100230 39.542 349 202 5 91 434 106 450 6.87e-80 260
MS.gene017011.t1 MTR_1g054630 35.477 451 274 8 83 517 156 605 2.66e-76 254
MS.gene017011.t1 MTR_4g105100 38.642 383 215 11 90 463 214 585 2.16e-75 252
MS.gene017011.t1 MTR_3g467550 38.609 417 222 10 37 429 37 443 3.93e-74 246
MS.gene017011.t1 MTR_6g005550 37.322 351 210 5 83 428 167 512 5.67e-73 248
MS.gene017011.t1 MTR_4g114120 35.934 423 245 8 83 483 142 560 6.70e-73 246
MS.gene017011.t1 MTR_3g467550 41.176 340 187 5 101 429 137 474 8.51e-73 243
MS.gene017011.t1 MTR_5g027840 38.810 353 205 8 86 430 109 458 4.32e-72 241
MS.gene017011.t1 MTR_2g032630 37.356 348 212 4 86 430 501 845 4.28e-71 248
MS.gene017011.t1 MTR_3g083690 36.324 457 261 10 83 520 147 592 5.73e-71 240
MS.gene017011.t1 MTR_4g134170 39.452 365 196 7 87 429 293 654 1.66e-69 238
MS.gene017011.t1 MTR_6g005320 39.286 364 196 7 87 429 255 614 1.58e-68 234
MS.gene017011.t1 MTR_7g056830 37.097 372 221 7 85 451 14 377 2.58e-67 226
MS.gene017011.t1 MTR_6g082080 37.097 372 221 7 85 451 14 377 5.09e-67 224
MS.gene017011.t1 MTR_2g438110 32.041 387 230 7 84 456 37 404 1.29e-64 217
MS.gene017011.t1 MTR_1g095810 34.452 447 247 11 91 504 155 588 5.22e-64 221
MS.gene017011.t1 MTR_2g007000 37.326 359 208 7 86 434 509 860 6.35e-64 228
MS.gene017011.t1 MTR_7g109720 34.794 388 236 7 51 434 213 587 1.99e-62 220
MS.gene017011.t1 MTR_3g467550 40.584 308 170 5 106 402 142 447 2.70e-62 213
MS.gene017011.t1 MTR_1g026830 34.783 414 238 9 91 483 157 559 2.92e-62 216
MS.gene017011.t1 MTR_2g039960 34.501 371 230 6 85 451 45 406 5.29e-60 205
MS.gene017011.t1 MTR_7g076800 32.626 377 241 5 78 451 138 504 8.76e-60 207
MS.gene017011.t1 MTR_7g076830 32.626 377 241 5 78 451 140 506 1.18e-59 207
MS.gene017011.t1 MTR_4g105100 38.033 305 175 8 90 388 214 510 5.43e-59 206
MS.gene017011.t1 MTR_7g076820 32.275 378 241 6 78 451 147 513 6.27e-59 205
MS.gene017011.t1 MTR_4g125970 34.409 372 229 8 85 451 45 406 1.24e-58 202
MS.gene017011.t1 MTR_4g125970 34.409 372 229 8 85 451 62 423 1.83e-58 202
MS.gene017011.t1 MTR_8g018400 33.777 376 236 6 85 456 45 411 1.91e-57 198
MS.gene017011.t1 MTR_2g099620 34.043 376 235 6 85 456 29 395 2.76e-57 197
MS.gene017011.t1 MTR_2g099620 34.043 376 235 6 85 456 45 411 2.92e-57 198
MS.gene017011.t1 MTR_2g041140 36.364 374 220 10 84 447 144 509 7.67e-56 201
MS.gene017011.t1 MTR_3g049990 35.190 395 243 8 60 447 131 519 1.79e-55 200
MS.gene017011.t1 MTR_3g071620 31.771 384 231 9 69 426 4 382 2.14e-51 186
MS.gene017011.t1 MTR_4g079320 33.714 350 211 9 85 424 23 361 2.17e-51 189
MS.gene017011.t1 MTR_8g027775 31.635 373 240 9 99 457 120 491 4.32e-50 182
MS.gene017011.t1 MTR_2g066050 35.068 365 219 8 85 440 57 412 1.14e-48 177
MS.gene017011.t1 MTR_8g027780 31.635 373 240 9 99 457 124 495 2.81e-48 177
MS.gene017011.t1 MTR_4g112340 32.410 361 221 12 94 440 110 461 7.43e-47 174
MS.gene017011.t1 MTR_8g027770 31.429 385 244 9 92 457 207 590 6.48e-46 172
MS.gene017011.t1 MTR_3g107420 30.952 378 211 13 106 459 72 423 9.68e-46 167
MS.gene017011.t1 MTR_2g055850 30.978 368 234 9 85 440 95 454 6.53e-45 167
MS.gene017011.t1 MTR_6g033070 29.945 364 243 9 80 436 139 497 1.05e-44 167
MS.gene017011.t1 MTR_1g012420 30.688 378 212 13 106 459 72 423 1.47e-44 164
MS.gene017011.t1 MTR_8g097000 29.140 477 280 17 67 501 270 730 1.76e-44 169
MS.gene017011.t1 MTR_7g057250 32.126 414 206 11 84 425 166 576 6.84e-44 167
MS.gene017011.t1 MTR_4g010565 31.148 366 226 10 106 459 149 500 7.33e-44 164
MS.gene017011.t1 MTR_1g083130 28.706 425 247 10 70 444 15 433 5.04e-42 160
MS.gene017011.t1 MTR_2g063080 27.816 435 237 10 83 449 111 536 7.25e-40 153
MS.gene017011.t1 MTR_0915s0010 32.639 288 181 5 97 381 5 282 2.84e-39 145
MS.gene017011.t1 MTR_6g039840 30.790 367 234 9 85 433 114 478 1.09e-38 151
MS.gene017011.t1 MTR_5g092560 30.952 336 206 9 106 426 101 425 1.73e-38 151
MS.gene017011.t1 MTR_4g059460 27.865 445 246 15 85 455 48 491 1.86e-38 150
MS.gene017011.t1 MTR_4g068990 29.921 381 230 11 84 440 71 438 2.24e-38 151
MS.gene017011.t1 MTR_2g043360 26.754 456 259 14 74 455 34 488 3.46e-38 149
MS.gene017011.t1 MTR_8g027780 31.329 316 203 8 99 400 124 439 1.36e-37 145
MS.gene017011.t1 MTR_7g100820 27.419 372 243 11 91 451 144 499 4.25e-36 143
MS.gene017011.t1 MTR_8g018370 30.899 356 192 10 110 451 2 317 8.30e-36 137
MS.gene017011.t1 MTR_5g069330 29.381 388 247 11 76 451 2 374 2.72e-35 138
MS.gene017011.t1 MTR_5g069330 29.551 379 240 11 85 451 7 370 7.41e-35 136
MS.gene017011.t1 MTR_5g077690 28.235 425 213 14 93 439 41 451 9.27e-35 138
MS.gene017011.t1 MTR_1g046570 29.381 388 220 14 106 451 16 391 9.35e-34 133
MS.gene017011.t1 MTR_1g061970 27.342 395 235 11 110 469 114 491 1.34e-33 134
MS.gene017011.t1 MTR_1g015150 59.483 116 27 3 32 143 4 103 1.96e-32 121
MS.gene017011.t1 MTR_4g112320 31.559 263 167 8 186 440 22 279 3.50e-32 129
MS.gene017011.t1 MTR_6g039840 32.095 296 184 8 153 433 9 302 1.06e-31 129
MS.gene017011.t1 MTR_4g049910 26.196 397 220 12 110 471 89 447 3.33e-29 121
MS.gene017011.t1 MTR_4g077370 36.019 211 118 4 76 278 245 446 3.98e-29 120
MS.gene017011.t1 MTR_4g077370 32.500 200 109 5 80 274 1 179 8.51e-21 95.9
MS.gene017011.t1 MTR_3g118120 26.463 393 248 12 85 442 136 522 4.01e-27 115
MS.gene017011.t1 MTR_2g043360 24.932 365 203 12 161 455 7 370 2.35e-25 110
MS.gene017011.t1 MTR_4g068990 31.050 219 145 4 226 440 11 227 1.92e-23 104
MS.gene017011.t1 MTR_5g092560 31.707 205 135 3 226 426 11 214 3.35e-23 103
MS.gene017011.t1 MTR_1g022305 24.880 418 224 15 85 489 7 347 5.35e-23 102
MS.gene017011.t1 MTR_3g107420 33.333 189 105 5 106 284 72 249 1.45e-22 99.0
MS.gene017011.t1 MTR_4g459350 31.068 206 119 5 85 267 45 250 3.40e-21 94.4
MS.gene017011.t1 MTR_8g042690 24.496 347 230 9 106 434 43 375 2.53e-20 94.7
MS.gene017011.t1 MTR_8g032230 36.000 150 88 4 85 231 14 158 4.17e-19 85.5
MS.gene017011.t1 MTR_8g079462 28.877 187 119 5 261 439 87 267 5.07e-17 82.8
MS.gene017011.t1 MTR_4g131750 27.792 385 206 14 81 417 82 442 6.48e-17 84.3
MS.gene017011.t1 MTR_3g063040 26.857 350 201 15 105 430 19 337 7.86e-14 75.1
MS.gene017011.t1 MTR_1g009617 36.170 94 58 1 358 451 178 269 1.52e-13 73.2
MS.gene017011.t1 MTR_1g102425 32.773 119 70 2 310 428 73 181 3.71e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017011.t1 AT3G22330 66.275 510 148 4 1 486 1 510 0.0 661
MS.gene017011.t1 AT3G22310 60.545 550 138 5 1 511 1 510 0.0 638
MS.gene017011.t1 AT5G26742 65.508 374 125 1 78 447 100 473 1.16e-168 498
MS.gene017011.t1 AT5G26742 65.508 374 125 1 78 447 100 473 1.20e-168 498
MS.gene017011.t1 AT5G26742 66.279 344 112 1 108 447 37 380 1.25e-156 464
MS.gene017011.t1 AT5G62190 45.503 378 193 6 82 450 98 471 6.77e-94 302
MS.gene017011.t1 AT1G55150 39.467 413 220 12 78 467 90 495 1.56e-83 270
MS.gene017011.t1 AT1G55150 39.467 413 220 12 78 467 115 520 1.38e-82 268
MS.gene017011.t1 AT5G63120 38.873 355 208 5 90 439 175 525 1.58e-79 262
MS.gene017011.t1 AT5G14610 37.822 349 204 6 86 429 167 507 8.02e-75 251
MS.gene017011.t1 AT5G14610 37.822 349 204 6 86 429 167 507 8.10e-75 251
MS.gene017011.t1 AT5G14610 35.079 382 238 5 86 462 175 551 1.11e-74 251
MS.gene017011.t1 AT3G01540 37.006 354 213 5 86 434 164 512 1.53e-74 249
MS.gene017011.t1 AT5G14610 39.385 325 187 5 105 424 55 374 3.21e-74 246
MS.gene017011.t1 AT5G14610 39.385 325 187 5 105 424 55 374 3.21e-74 246
MS.gene017011.t1 AT2G42520 36.750 400 236 8 83 466 162 560 3.00e-73 246
MS.gene017011.t1 AT2G42520 36.750 400 236 8 83 466 162 560 3.00e-73 246
MS.gene017011.t1 AT2G42520 36.750 400 236 8 83 466 162 560 3.00e-73 246
MS.gene017011.t1 AT5G14610 36.043 369 226 5 99 462 248 611 3.31e-73 248
MS.gene017011.t1 AT3G58570 36.500 400 237 7 83 466 149 547 3.65e-73 246
MS.gene017011.t1 AT3G01540 36.020 397 242 7 86 475 164 555 1.15e-72 244
MS.gene017011.t1 AT3G01540 36.020 397 242 7 86 475 164 555 1.15e-72 244
MS.gene017011.t1 AT3G01540 36.020 397 242 7 86 475 164 555 1.15e-72 244
MS.gene017011.t1 AT1G20920 36.855 407 237 11 86 480 197 595 1.66e-72 248
MS.gene017011.t1 AT1G20920 37.255 408 234 12 86 480 535 933 5.87e-71 248
MS.gene017011.t1 AT1G20920 37.255 408 234 12 86 480 535 933 5.87e-71 248
MS.gene017011.t1 AT1G20920 37.255 408 234 12 86 480 535 933 5.87e-71 248
MS.gene017011.t1 AT1G20920 37.255 408 234 12 86 480 535 933 5.87e-71 248
MS.gene017011.t1 AT1G20920 37.255 408 234 12 86 480 535 933 5.87e-71 248
MS.gene017011.t1 AT1G20920 37.255 408 234 12 86 480 535 933 5.87e-71 248
MS.gene017011.t1 AT1G31970 41.691 343 186 8 98 429 132 471 1.26e-70 237
MS.gene017011.t1 AT3G58510 35.753 372 226 5 105 463 176 547 5.21e-69 234
MS.gene017011.t1 AT3G58510 35.753 372 226 5 105 463 176 547 5.21e-69 234
MS.gene017011.t1 AT3G58510 35.753 372 226 5 105 463 176 547 5.21e-69 234
MS.gene017011.t1 AT3G06480 36.963 349 212 5 86 430 441 785 3.60e-68 239
MS.gene017011.t1 AT2G33730 38.889 360 195 7 87 424 320 676 5.99e-67 232
MS.gene017011.t1 AT5G60990 34.977 426 255 9 83 490 12 433 1.70e-66 224
MS.gene017011.t1 AT3G19760 32.419 401 231 8 70 456 32 406 5.81e-66 221
MS.gene017011.t1 AT2G47330 36.693 387 220 9 58 434 213 584 4.34e-65 227
MS.gene017011.t1 AT5G14610 35.821 335 200 7 86 415 175 499 9.87e-63 215
MS.gene017011.t1 AT5G63120 38.387 310 182 5 90 394 175 480 1.49e-62 214
MS.gene017011.t1 AT5G63120 38.387 310 182 5 90 394 175 480 1.49e-62 214
MS.gene017011.t1 AT5G63120 38.387 310 182 5 90 394 175 480 1.49e-62 214
MS.gene017011.t1 AT5G63120 38.487 304 178 5 90 388 175 474 1.77e-62 214
MS.gene017011.t1 AT5G51280 33.557 447 259 11 91 513 157 589 5.06e-62 215
MS.gene017011.t1 AT4G00660 32.891 377 240 5 78 451 129 495 4.71e-61 211
MS.gene017011.t1 AT4G00660 32.891 377 240 5 78 451 129 495 4.71e-61 211
MS.gene017011.t1 AT4G33370 33.784 444 259 10 91 513 108 537 1.83e-60 210
MS.gene017011.t1 AT1G51380 31.759 381 227 7 85 451 27 388 2.20e-60 206
MS.gene017011.t1 AT3G61240 32.637 383 233 7 78 451 122 488 2.35e-59 206
MS.gene017011.t1 AT3G61240 32.637 383 233 7 78 451 122 488 2.35e-59 206
MS.gene017011.t1 AT2G45810 33.247 385 241 7 78 458 152 524 2.48e-59 207
MS.gene017011.t1 AT3G09620 33.663 404 225 9 86 480 402 771 3.84e-59 213
MS.gene017011.t1 AT3G09620 33.663 404 225 9 86 480 403 772 4.10e-59 213
MS.gene017011.t1 AT1G72730 33.842 393 246 7 69 456 29 412 6.00e-59 202
MS.gene017011.t1 AT3G13920 34.483 377 232 8 85 456 44 410 1.17e-58 202
MS.gene017011.t1 AT1G28180 36.076 316 191 5 115 424 8 318 1.48e-58 200
MS.gene017011.t1 AT3G13920 34.483 377 232 8 85 456 34 400 2.93e-58 200
MS.gene017011.t1 AT1G16280 33.413 419 255 9 64 470 43 449 9.86e-58 201
MS.gene017011.t1 AT3G13920 34.483 377 227 9 85 456 44 405 1.02e-57 199
MS.gene017011.t1 AT1G71370 33.994 353 222 5 84 426 20 371 1.14e-57 203
MS.gene017011.t1 AT3G06480 35.443 316 196 5 86 397 441 752 4.23e-57 205
MS.gene017011.t1 AT3G13920 34.332 367 226 8 85 446 44 400 5.68e-57 197
MS.gene017011.t1 AT3G13920 34.332 367 226 8 85 446 48 404 6.87e-57 197
MS.gene017011.t1 AT1G54270 34.301 379 230 9 85 456 44 410 3.00e-56 195
MS.gene017011.t1 AT4G16630 36.290 372 222 9 84 447 171 535 7.24e-56 202
MS.gene017011.t1 AT1G54270 34.301 379 225 10 85 456 44 405 2.37e-55 193
MS.gene017011.t1 AT5G05450 32.869 359 221 7 87 426 23 380 5.65e-54 194
MS.gene017011.t1 AT1G77030 33.623 345 218 6 85 424 33 371 1.94e-53 196
MS.gene017011.t1 AT3G18600 32.877 365 229 10 85 440 94 451 6.70e-52 187
MS.gene017011.t1 AT5G08610 32.546 381 232 12 92 453 394 768 9.45e-52 191
MS.gene017011.t1 AT5G65900 33.875 369 221 12 85 440 159 517 2.97e-51 187
MS.gene017011.t1 AT5G63630 31.759 381 245 8 92 458 260 639 3.63e-50 185
MS.gene017011.t1 AT5G63630 31.759 381 245 8 92 458 66 445 1.82e-49 179
MS.gene017011.t1 AT5G08620 32.540 378 230 12 95 453 95 466 1.92e-48 177
MS.gene017011.t1 AT3G02065 30.602 415 253 10 47 431 56 465 4.22e-48 176
MS.gene017011.t1 AT3G02065 30.602 415 253 10 47 431 56 465 4.22e-48 176
MS.gene017011.t1 AT1G63250 32.865 356 224 10 87 427 335 690 3.98e-46 174
MS.gene017011.t1 AT3G02065 32.416 327 207 9 114 431 7 328 1.23e-45 165
MS.gene017011.t1 AT2G07750 33.146 356 223 10 87 427 382 737 2.18e-45 172
MS.gene017011.t1 AT5G11170 31.025 361 233 10 106 459 72 423 5.19e-45 165
MS.gene017011.t1 AT5G11200 31.025 361 233 10 106 459 72 423 5.19e-45 165
MS.gene017011.t1 AT5G11170 31.322 348 223 10 119 459 2 340 6.77e-43 157
MS.gene017011.t1 AT1G12770 27.338 417 250 7 84 447 114 530 2.27e-42 160
MS.gene017011.t1 AT1G12770 27.338 417 250 7 84 447 114 530 2.27e-42 160
MS.gene017011.t1 AT3G16840 31.281 406 203 13 106 439 217 618 3.81e-41 160
MS.gene017011.t1 AT3G16840 31.281 406 203 13 106 439 216 617 3.83e-41 160
MS.gene017011.t1 AT4G09730 31.551 374 222 12 84 432 116 480 1.85e-40 156
MS.gene017011.t1 AT5G11200 28.333 420 246 13 87 459 53 464 9.30e-40 151
MS.gene017011.t1 AT5G54910 29.919 371 237 10 83 440 74 434 3.17e-39 154
MS.gene017011.t1 AT4G15850 27.273 440 234 11 94 457 45 474 8.55e-39 150
MS.gene017011.t1 AT1G71280 32.911 316 179 8 84 392 21 310 4.16e-38 144
MS.gene017011.t1 AT5G11200 27.751 418 231 14 106 459 72 482 5.89e-38 147
MS.gene017011.t1 AT1G71280 32.808 317 180 8 84 393 21 311 1.59e-36 142
MS.gene017011.t1 AT2G40700 27.465 426 231 11 106 455 57 480 2.97e-36 144
MS.gene017011.t1 AT3G09720 27.027 370 247 8 91 451 152 507 6.26e-35 139
MS.gene017011.t1 AT3G09720 27.027 370 247 8 91 451 152 507 6.26e-35 139
MS.gene017011.t1 AT4G34910 28.052 385 223 7 84 418 50 430 2.54e-33 135
MS.gene017011.t1 AT1G51380 31.556 225 144 4 85 307 27 243 7.98e-31 122
MS.gene017011.t1 AT3G53110 27.907 344 219 11 118 441 132 466 3.87e-30 124
MS.gene017011.t1 AT3G06980 27.595 395 246 13 82 442 376 764 4.45e-30 126
MS.gene017011.t1 AT1G51380 32.110 218 133 4 70 285 19 223 6.23e-30 120
MS.gene017011.t1 AT1G51380 32.110 218 133 4 70 285 19 223 8.93e-30 119
MS.gene017011.t1 AT1G28180 35.652 115 70 2 109 219 2 116 3.25e-15 72.8
MS.gene017011.t1 AT1G59990 37.143 105 64 2 327 430 426 529 1.90e-11 67.4
MS.gene017011.t1 AT1G59990 37.143 105 64 2 327 430 426 529 1.95e-11 67.4

Find 173 sgRNAs with CRISPR-Local

Find 343 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGATACTATCTGTGTTTA+TGG 0.088373 5.2:+76512625 MS.gene017011:CDS
AACAAATATCTCTGAATTAT+TGG 0.139299 5.2:-76514925 None:intergenic
CTACGAGTCGGCGCCTAATT+TGG 0.150060 5.2:+76512606 MS.gene017011:CDS
TCCTTTGGTTCCGGTGATTC+AGG 0.244361 5.2:+76515875 MS.gene017011:CDS
GGATCCTCTGGCTTTGGTTT+TGG 0.250641 5.2:+76512543 MS.gene017011:CDS
GGTGGATTCGGTGGTGGTTT+TGG 0.258955 5.2:+76515977 MS.gene017011:CDS
TTCAGCAAACAAGGTGGTTT+TGG 0.273712 5.2:+76515926 MS.gene017011:CDS
GGTGGTGGCGGTGGTGGATT+TGG 0.301297 5.2:+76515686 MS.gene017011:CDS
GGCGGTGGTGGATTTGGTGG+TGG 0.314193 5.2:+76515692 MS.gene017011:CDS
AAGATCAATCCAGGACTCTT+AGG 0.323614 5.2:+76515009 MS.gene017011:CDS
GATGCTTCAAGTTGGGTTCC+AGG 0.324647 5.2:+76512795 MS.gene017011:CDS
TTTAGTGGTGGCGGCAGATT+TGG 0.327034 5.2:+76515665 MS.gene017011:CDS
GAGATATTTGTTCACCGATC+TGG 0.335060 5.2:+76514936 MS.gene017011:CDS
CAGATGAGGCAGCTTGATTA+TGG 0.339395 5.2:+76512667 MS.gene017011:CDS
TGGATACTATCTGTGTTTAT+GGG 0.339756 5.2:+76512626 MS.gene017011:CDS
ACACAGATAGTATCCAAATT+AGG 0.347866 5.2:-76512619 None:intergenic
TCTGGTCGTTTCGGCTCCTT+TGG 0.349279 5.2:+76515860 MS.gene017011:CDS
TTGCCACTAAAACATTAAAA+TGG 0.351701 5.2:-76513749 None:intergenic
ACAAATATCTCTGAATTATT+GGG 0.364531 5.2:-76514924 None:intergenic
AGAAGGCATACTTTAATTAG+AGG 0.364613 5.2:-76513471 None:intergenic
GCGGTGGTGGATTTGGTGGT+GGG 0.366128 5.2:+76515693 MS.gene017011:CDS
CGTTTCGGCTCCTTTGGTTC+CGG 0.369745 5.2:+76515866 MS.gene017011:CDS
TCGGGTAAACCTGGCGCATT+TGG 0.373148 5.2:+76516010 MS.gene017011:CDS
GAGCTCAGTGGCGGCGGTGG+TGG 0.374607 5.2:-76511587 None:intergenic
TCAGGATATTGTCGCTGCTT+TGG 0.375607 5.2:+76511771 MS.gene017011:CDS
ATATCTTCTCCACATCTTCC+TGG 0.375700 5.2:-76512813 None:intergenic
AGGAAAGGATCCTCTGGCTT+TGG 0.382847 5.2:+76512537 MS.gene017011:CDS
CGGTGGTGGATTTGGTGGTG+GGG 0.391305 5.2:+76515694 MS.gene017011:CDS
TCTGGAGGCTACAGTAATTC+AGG 0.391318 5.2:+76515752 MS.gene017011:CDS
AATCTCGGCGGCGGCGGGGA+TGG 0.397597 5.2:-76511557 None:intergenic
GGTGGCGGTGGTGGATTTGG+TGG 0.399718 5.2:+76515689 MS.gene017011:CDS
CAGAGAGAAAGGACACTTGC+TGG 0.399874 5.2:+76513714 MS.gene017011:CDS
GGAAGATGTGGAGAAGATAT+TGG 0.401318 5.2:+76512816 MS.gene017011:CDS
AAGAGAATCTCGGCGGCGGC+GGG 0.401354 5.2:-76511562 None:intergenic
GCCTCATCTGTTGAGAGATC+GGG 0.401835 5.2:-76512654 None:intergenic
TGGTGGATTCGGTGGTGGTT+CGG 0.403624 5.2:+76515946 MS.gene017011:CDS
ATTATTGATCTTCTTAATAG+AGG 0.404477 5.2:+76512721 MS.gene017011:CDS
TCTGGTGGATCAAGCTCATA+TGG 0.406470 5.2:+76515812 MS.gene017011:CDS
CTTACAAGATCAATGGTTAG+AGG 0.406494 5.2:-76512928 None:intergenic
AGATTTGGTGGTGGCGGTGG+TGG 0.413951 5.2:+76515680 MS.gene017011:CDS
GTCTTGAGATCGCGAAGCTT+GGG 0.415828 5.2:+76511743 MS.gene017011:CDS
CGCTCTGGTGGATTCGGTGG+TGG 0.416984 5.2:+76515971 MS.gene017011:CDS
TCGGATCGCTCTGGTGGATT+CGG 0.418018 5.2:+76515965 MS.gene017011:CDS
GCTTCTTCTGCTTCTCGCGC+TGG 0.418631 5.2:+76511664 MS.gene017011:CDS
AGAAGAAGCGCGGAATAGTA+AGG 0.421344 5.2:-76511650 None:intergenic
TGCCGTTGATACTGCATCAC+TGG 0.421898 5.2:+76515637 MS.gene017011:CDS
AGTAGATCTGGTGGATCCTC+TGG 0.426899 5.2:+76515899 MS.gene017011:CDS
ACGGAGCTCAGTGGCGGCGG+TGG 0.427658 5.2:-76511590 None:intergenic
GGTGGTGGATTTGGTGGTGG+GGG 0.429754 5.2:+76515695 MS.gene017011:CDS
CATTTGGTGATCGTCGTGGC+AGG 0.437006 5.2:+76516026 MS.gene017011:CDS
CTGAATGATCTTATCCATGA+TGG 0.442475 5.2:-76512082 None:intergenic
GACTAGAGAACTTGCGAAGC+AGG 0.450743 5.2:+76512570 MS.gene017011:CDS
GCATCACTGGGCGGATTTAG+TGG 0.451004 5.2:+76515650 MS.gene017011:CDS
CTTCATCAAGAATAACAAAC+TGG 0.453392 5.2:-76512765 None:intergenic
GGATCAAGCTCTGGTCGTTT+CGG 0.456113 5.2:+76515851 MS.gene017011:CDS
CGCGAAGCTTGGGATTTCTC+AGG 0.456686 5.2:+76511753 MS.gene017011:CDS
GGCAGATTTGGTGGTGGCGG+TGG 0.457234 5.2:+76515677 MS.gene017011:CDS
GAACTCACAAGATCAACATT+AGG 0.457570 5.2:-76513801 None:intergenic
CGGGGATGGTTCGCCGTGAG+AGG 0.459848 5.2:-76511543 None:intergenic
TGCCTCATCTGTTGAGAGAT+CGG 0.462495 5.2:-76512655 None:intergenic
TATTGAACGCAAACCTGAAT+GGG 0.465119 5.2:-76511820 None:intergenic
CCGATCAGATGCTTCAAGTT+GGG 0.465196 5.2:+76512788 MS.gene017011:CDS
TCATATGGTGAAAATAGATA+TGG 0.472539 5.2:+76515827 MS.gene017011:CDS
GAAGAGAATCTCGGCGGCGG+CGG 0.473316 5.2:-76511563 None:intergenic
GGTGATTCAGGCAGTAGATC+TGG 0.473447 5.2:+76515887 MS.gene017011:CDS
CTCAATAGTCCTAAGAGTCC+TGG 0.473742 5.2:-76515018 None:intergenic
GGTCTTGAGATCGCGAAGCT+TGG 0.475328 5.2:+76511742 MS.gene017011:CDS
TTATTGAACGCAAACCTGAA+TGG 0.476985 5.2:-76511821 None:intergenic
GGTCGAGCAAGAACAGGAAC+TGG 0.480998 5.2:+76512036 MS.gene017011:CDS
GTTCACCGATCTGGACGAAC+TGG 0.481054 5.2:+76514945 MS.gene017011:CDS
CAGCAAGTGTCCTTTCTCTC+TGG 0.484298 5.2:-76513713 None:intergenic
ATGATTGGTCGAGCAAGAAC+AGG 0.484418 5.2:+76512030 MS.gene017011:CDS
ATATCACGACCTTGCATAGC+AGG 0.484798 5.2:-76512009 None:intergenic
GTTAACTGCTTTATCCAAGT+TGG 0.487113 5.2:-76512886 None:intergenic
GGCGGCAGATTTGGTGGTGG+CGG 0.491791 5.2:+76515674 MS.gene017011:CDS
GCAACTGATGTTGCTTCACG+TGG 0.496446 5.2:+76513768 MS.gene017011:CDS
TATCACAAGTCCAGAGAGAA+AGG 0.496958 5.2:+76513703 MS.gene017011:CDS
GGGGATGGTTCGCCGTGAGA+GGG 0.505588 5.2:-76511542 None:intergenic
GGATACTATCTGTGTTTATG+GGG 0.508750 5.2:+76512627 MS.gene017011:CDS
TCTCTGCAACAATGCCAACT+TGG 0.508889 5.2:+76512872 MS.gene017011:CDS
GTCGCTGCTTTGGAGAAGAA+AGG 0.510304 5.2:+76511781 MS.gene017011:CDS
AGGACTATTGAGCGCGATGT+AGG 0.511681 5.2:+76515029 MS.gene017011:CDS
AGTGGTGGCGGCAGATTTGG+TGG 0.513908 5.2:+76515668 MS.gene017011:CDS
AGCAAAACTTACAAGATCAA+TGG 0.518388 5.2:-76512935 None:intergenic
GCCGATCAGATGCTTCAAGT+TGG 0.519549 5.2:+76512787 MS.gene017011:CDS
AGGATCTTGCTGCGAGGTGA+CGG 0.519599 5.2:-76511609 None:intergenic
AGATATGGCGGATCAAGCTC+TGG 0.522047 5.2:+76515842 MS.gene017011:CDS
TTTATACACAAGATCAATCC+AGG 0.523638 5.2:+76515000 MS.gene017011:CDS
GGGTTGTGATTTAGAGTGAA+AGG 0.523987 5.2:-76511629 None:intergenic
ACTGGTCGTGCTGGTAAGAA+AGG 0.525068 5.2:+76514963 MS.gene017011:CDS
CAGACGAGGAAAGGATCCTC+TGG 0.525722 5.2:+76512531 MS.gene017011:intron
TCTGGACGAACTGGTCGTGC+TGG 0.526650 5.2:+76514954 MS.gene017011:CDS
GTGACGGAGCTCAGTGGCGG+CGG 0.534024 5.2:-76511593 None:intergenic
ATTCAGTTTAATGCTAAACA+TGG 0.536360 5.2:+76512099 MS.gene017011:CDS
CTCTTGTAGGAACATGCAAA+AGG 0.540991 5.2:+76513582 MS.gene017011:intron
TCTGATGCGTATGTCAAAGC+AGG 0.544061 5.2:+76513438 MS.gene017011:CDS
ACACTTGCTGGCTTCAGAAA+CGG 0.545670 5.2:+76513726 MS.gene017011:CDS
CTGGGCGGATTTAGTGGTGG+CGG 0.546376 5.2:+76515656 MS.gene017011:CDS
TTGATATGGCAGACGAGGAA+AGG 0.548428 5.2:+76512522 MS.gene017011:intron
TTTGTTGGTGGCCGTTCTGG+AGG 0.551399 5.2:+76515737 MS.gene017011:CDS
AGATCTACTGCCTGAATCAC+CGG 0.553069 5.2:-76515885 None:intergenic
GGTGGTGGTTCGGATCGCTC+TGG 0.559716 5.2:+76515956 MS.gene017011:CDS
CGCGAGAAGCAGAAGAAGCG+CGG 0.560768 5.2:-76511660 None:intergenic
TGGAGATTCTGATCAGAAGC+TGG 0.561614 5.2:+76513386 MS.gene017011:CDS
GCCTGAATCACCGGAACCAA+AGG 0.562334 5.2:-76515876 None:intergenic
TCTCCATGCAATGCCTCACA+TGG 0.563344 5.2:-76513678 None:intergenic
TCTGAGGATAGTGGTAATCA+TGG 0.564698 5.2:-76511506 None:intergenic
CGACGATCACCAAATGCGCC+AGG 0.570480 5.2:-76516019 None:intergenic
GGTTCAAGACAATCTGGAGG+GGG 0.571959 5.2:+76515785 MS.gene017011:CDS
ACTTGCGAAGCAGGTTGAGA+AGG 0.572880 5.2:+76512579 MS.gene017011:CDS
GATATAGCGGTTGGTACACC+TGG 0.573775 5.2:+76512694 MS.gene017011:CDS
TTCAGTTTAATGCTAAACAT+GGG 0.574341 5.2:+76512100 MS.gene017011:CDS
ATTCCATGTGAGGCATTGCA+TGG 0.576577 5.2:+76513675 MS.gene017011:CDS
TGAATGATCTTATCCATGAT+GGG 0.576602 5.2:-76512081 None:intergenic
AGAAGCGCGTCTGAGGATAG+TGG 0.577060 5.2:-76511515 None:intergenic
GATACTATCTGTGTTTATGG+GGG 0.577073 5.2:+76512628 MS.gene017011:CDS
CTGGTTCAAGACAATCTGGA+GGG 0.577308 5.2:+76515783 MS.gene017011:CDS
CCCAACTTGAAGCATCTGAT+CGG 0.577618 5.2:-76512788 None:intergenic
AGATCTGGTGGATCCTCTGG+TGG 0.579065 5.2:+76515902 MS.gene017011:CDS
TCGAAATCGAATAGCGATGA+GGG 0.579604 5.2:+76511721 MS.gene017011:CDS
AGAAGATCAATAATTCGTCC+AGG 0.580562 5.2:-76512712 None:intergenic
TCTGATCAGAAGCTGGCCGA+TGG 0.581559 5.2:+76513393 MS.gene017011:CDS
AGAGAATCTCGGCGGCGGCG+GGG 0.583155 5.2:-76511561 None:intergenic
AGTTGGGTTCCAGGAAGATG+TGG 0.583757 5.2:+76512804 MS.gene017011:CDS
GATCGCTCTGGTGGATTCGG+TGG 0.584846 5.2:+76515968 MS.gene017011:CDS
CACGACCAGTTCGTCCAGAT+CGG 0.587763 5.2:-76514950 None:intergenic
GGTGGTTCGGATCGCTCTGG+TGG 0.588004 5.2:+76515959 MS.gene017011:CDS
GGGTTGAAGAAGCGCGTCTG+AGG 0.591518 5.2:-76511522 None:intergenic
ATGAGAGTTTGTCTCTCAGT+GGG 0.594672 5.2:-76512847 None:intergenic
TCATCGCTATTCGATTTCGA+AGG 0.595547 5.2:-76511718 None:intergenic
ATGCAAGGTCGTGATATGAT+TGG 0.596643 5.2:+76512015 MS.gene017011:CDS
ATTTGGTGATCGTCGTGGCA+GGG 0.597318 5.2:+76516027 MS.gene017011:CDS
GAAGAAGCGCGGAATAGTAA+GGG 0.597324 5.2:-76511649 None:intergenic
GTGCTGGAACCTGCTATGCA+AGG 0.597518 5.2:+76512000 MS.gene017011:CDS
TCTGGTGGATTCAGCAAACA+AGG 0.597677 5.2:+76515917 MS.gene017011:CDS
GCCCAGTGATGCAGTATCAA+CGG 0.599175 5.2:-76515639 None:intergenic
CACCAACAAAAGAACCAGAT+CGG 0.603698 5.2:-76515724 None:intergenic
GCCGTTGATACTGCATCACT+GGG 0.604878 5.2:+76515638 MS.gene017011:CDS
GAGGCTACAGTAATTCAGGC+GGG 0.607727 5.2:+76515756 MS.gene017011:CDS
GGAGAAGAGAATCTCGGCGG+CGG 0.613460 5.2:-76511566 None:intergenic
TATGGTGTTGATATAGCGGT+TGG 0.615411 5.2:+76512685 MS.gene017011:CDS
TTCAAAACGAAAAGCTTCTG+CGG 0.618866 5.2:-76511692 None:intergenic
GTTCAAGACAATCTGGAGGG+GGG 0.621273 5.2:+76515786 MS.gene017011:CDS
GGTGGTGGAGAAGAGAATCT+CGG 0.623069 5.2:-76511572 None:intergenic
GGTGGCGGCAGATTTGGTGG+TGG 0.628826 5.2:+76515671 MS.gene017011:CDS
CGAGTACAGTGAAATTCCAT+CGG 0.630256 5.2:-76513409 None:intergenic
TGATTATGGTGTTGATATAG+CGG 0.635851 5.2:+76512681 MS.gene017011:CDS
GGAGGCTACAGTAATTCAGG+CGG 0.636585 5.2:+76515755 MS.gene017011:CDS
TTGTAGGAACATGCAAAAGG+AGG 0.637081 5.2:+76513585 MS.gene017011:intron
CCCCGATCTCTCAACAGATG+AGG 0.638550 5.2:+76512653 MS.gene017011:CDS
TCTGGTTCAAGACAATCTGG+AGG 0.644868 5.2:+76515782 MS.gene017011:CDS
TCACTGGGCGGATTTAGTGG+TGG 0.646109 5.2:+76515653 MS.gene017011:CDS
CCTCATCTGTTGAGAGATCG+GGG 0.649386 5.2:-76512653 None:intergenic
TGAGAAGGAATTCTACGAGT+CGG 0.649678 5.2:+76512594 MS.gene017011:CDS
GAGGTGACGGAGCTCAGTGG+CGG 0.650395 5.2:-76511596 None:intergenic
TATGGTGAAAATAGATATGG+CGG 0.650568 5.2:+76515830 MS.gene017011:CDS
CATGAGAGTTTGTCTCTCAG+TGG 0.652328 5.2:-76512848 None:intergenic
TTCGAAATCGAATAGCGATG+AGG 0.652697 5.2:+76511720 MS.gene017011:CDS
GATTCAGGCAGTAGATCTGG+TGG 0.657314 5.2:+76515890 MS.gene017011:CDS
TTGTTTGCTGAATCCACCAG+AGG 0.663460 5.2:-76515915 None:intergenic
TGCTTCGCAAGTTCTCTAGT+CGG 0.663905 5.2:-76512568 None:intergenic
AATTACTGTAGCCTCCAGAA+CGG 0.666725 5.2:-76515748 None:intergenic
CAACTGATGTTGCTTCACGT+GGG 0.668416 5.2:+76513769 MS.gene017011:CDS
GGCGCCAAAACCAAAGCCAG+AGG 0.670484 5.2:-76512547 None:intergenic
GACGCTGATCGAATATCACA+TGG 0.675934 5.2:+76513639 MS.gene017011:CDS
GCGCTTCTTCAACCCTCTCA+CGG 0.678157 5.2:+76511530 MS.gene017011:CDS
GGCGCATTTGGTGATCGTCG+TGG 0.680089 5.2:+76516022 MS.gene017011:CDS
GTTGATACTGCATCACTGGG+CGG 0.682139 5.2:+76515641 MS.gene017011:CDS
TGGTTCAAGACAATCTGGAG+GGG 0.684246 5.2:+76515784 MS.gene017011:CDS
TGCGAGGTGACGGAGCTCAG+TGG 0.693623 5.2:-76511599 None:intergenic
GGTGGATTCAGCAAACAAGG+TGG 0.720028 5.2:+76515920 MS.gene017011:CDS
AGTGAAAGGATCTTGCTGCG+AGG 0.725624 5.2:-76511615 None:intergenic
GGTGGAGAAGAGAATCTCGG+CGG 0.777683 5.2:-76511569 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATGGAATAAAATATAT+TGG - chr5.2:76513865-76513884 None:intergenic 10.0%
!! TTAAAAAATAAATTAACAAC+TGG - chr5.2:76515553-76515572 None:intergenic 10.0%
!! TTTATATCTGTATTAATATA+TGG - chr5.2:76513880-76513899 None:intergenic 10.0%
!!! AAATATTTTTTTGTTATAAC+AGG - chr5.2:76513913-76513932 None:intergenic 10.0%
!!! AAATTTTTGTATATGAATTT+AGG + chr5.2:76513247-76513266 MS.gene017011:intron 10.0%
!!! AACATTATTAGTTTTTTTTT+TGG + chr5.2:76514731-76514750 MS.gene017011:intron 10.0%
!!! AATATTTTTTTGTTATAACA+GGG - chr5.2:76513912-76513931 None:intergenic 10.0%
!!! ATAAATGTTTTTTTTGTTTT+CGG + chr5.2:76514559-76514578 MS.gene017011:intron 10.0%
!!! GTTGTTAATTTATTTTTTAA+TGG + chr5.2:76515553-76515572 MS.gene017011:intron 10.0%
!!! TTATAAGTTTTTTTTTAAGA+CGG - chr5.2:76513940-76513959 None:intergenic 10.0%
!!! TTTAGATATTATTGATTAAT+TGG + chr5.2:76512130-76512149 MS.gene017011:intron 10.0%
!! AAAATTAGATATTAGAATCT+TGG + chr5.2:76514588-76514607 MS.gene017011:intron 15.0%
!! AATATAATATGAAAACAAGT+GGG - chr5.2:76515296-76515315 None:intergenic 15.0%
!! TTATTATTTAACTATCTCTA+TGG + chr5.2:76514418-76514437 MS.gene017011:intron 15.0%
!!! AAATGAAGTTAAATTGTTTT+TGG + chr5.2:76512284-76512303 MS.gene017011:intron 15.0%
!!! ACATGCATTAATTTTTTATT+TGG + chr5.2:76514239-76514258 MS.gene017011:intron 15.0%
!!! TATAAGTTTTTTTTTAAGAC+GGG - chr5.2:76513939-76513958 None:intergenic 15.0%
!!! TATTTTCAACATTTTAATCA+TGG - chr5.2:76513050-76513069 None:intergenic 15.0%
!!! TTAAGTTTACATCTTTTTTT+TGG + chr5.2:76512499-76512518 MS.gene017011:intron 15.0%
!! AAATTAAGAGGATTATATGA+TGG - chr5.2:76513539-76513558 None:intergenic 20.0%
!! AACAAATATCTCTGAATTAT+TGG - chr5.2:76514928-76514947 None:intergenic 20.0%
!! AATGTTATAATATTCCATTG+TGG - chr5.2:76513105-76513124 None:intergenic 20.0%
!! ACAAATATCTCTGAATTATT+GGG - chr5.2:76514927-76514946 None:intergenic 20.0%
!! AGAAATTAGACTACATTTAA+AGG + chr5.2:76515154-76515173 MS.gene017011:intron 20.0%
!! ATTATTGATCTTCTTAATAG+AGG + chr5.2:76512721-76512740 MS.gene017011:CDS 20.0%
!! CAGAAAAATAGTAATAAACA+AGG - chr5.2:76515129-76515148 None:intergenic 20.0%
!! GAAATTAGACTACATTTAAA+GGG + chr5.2:76515155-76515174 MS.gene017011:intron 20.0%
!! GAATATAATATGAAAACAAG+TGG - chr5.2:76515297-76515316 None:intergenic 20.0%
!! GAGAAATATTTGGATTTAAA+TGG + chr5.2:76514049-76514068 MS.gene017011:intron 20.0%
!! GTAACTTATTACACTAATTT+AGG - chr5.2:76514800-76514819 None:intergenic 20.0%
!! TATCATACTCGAAAAAATTT+GGG + chr5.2:76513181-76513200 MS.gene017011:intron 20.0%
!! TCAAATCTAAGAGAAATATT+TGG + chr5.2:76514039-76514058 MS.gene017011:intron 20.0%
!!! AATTTGTTGAATTTTGTAGA+GGG + chr5.2:76511975-76511994 MS.gene017011:intron 20.0%
!!! AATTTTTTATTTGGAAGTTC+AGG + chr5.2:76514248-76514267 MS.gene017011:intron 20.0%
!!! CTTGTTTATTACTATTTTTC+TGG + chr5.2:76515127-76515146 MS.gene017011:intron 20.0%
!!! GTATAATCTATAAACTGTTT+TGG + chr5.2:76512306-76512325 MS.gene017011:intron 20.0%
!!! TAATTTGTTGAATTTTGTAG+AGG + chr5.2:76511974-76511993 MS.gene017011:intron 20.0%
! AAAGATACCAATTACACTAT+GGG - chr5.2:76512474-76512493 None:intergenic 25.0%
! AACTGTTAAACGTGAATATT+TGG - chr5.2:76515608-76515627 None:intergenic 25.0%
! AAGTAATAAAGATTGACAGA+TGG - chr5.2:76515097-76515116 None:intergenic 25.0%
! AATGAACACTTCAAAACATT+AGG - chr5.2:76514329-76514348 None:intergenic 25.0%
! ATATTAGAATCTTGGATGTA+AGG + chr5.2:76514596-76514615 MS.gene017011:intron 25.0%
! ATTCAGTTTAATGCTAAACA+TGG + chr5.2:76512099-76512118 MS.gene017011:CDS 25.0%
! CTATTTAACTGTGAACTTAT+TGG + chr5.2:76513354-76513373 MS.gene017011:intron 25.0%
! CTGATAATCTAAATTTAGTC+TGG + chr5.2:76515246-76515265 MS.gene017011:intron 25.0%
! GAAGAGAAAACAAAATTAAG+AGG - chr5.2:76513551-76513570 None:intergenic 25.0%
! GTATCATACTCGAAAAAATT+TGG + chr5.2:76513180-76513199 MS.gene017011:intron 25.0%
! TAAAGATACCAATTACACTA+TGG - chr5.2:76512475-76512494 None:intergenic 25.0%
! TATTAGAATCTTGGATGTAA+GGG + chr5.2:76514597-76514616 MS.gene017011:intron 25.0%
! TCATATGGTGAAAATAGATA+TGG + chr5.2:76515827-76515846 MS.gene017011:CDS 25.0%
! TTCAGTTTAATGCTAAACAT+GGG + chr5.2:76512100-76512119 MS.gene017011:CDS 25.0%
! TTGCCACTAAAACATTAAAA+TGG - chr5.2:76513752-76513771 None:intergenic 25.0%
! TTGGTTGAAACTAAATTGAT+GGG - chr5.2:76515364-76515383 None:intergenic 25.0%
! TTTGAATTGAAGCTAGATAT+GGG + chr5.2:76512168-76512187 MS.gene017011:intron 25.0%
!! TATGGTCATTTAGAAGTATA+TGG + chr5.2:76513283-76513302 MS.gene017011:intron 25.0%
!!! AACTTATAAAAGCATTGACA+AGG + chr5.2:76513951-76513970 MS.gene017011:intron 25.0%
!!! CATCTTTTTTTTGGTTGATA+TGG + chr5.2:76512508-76512527 MS.gene017011:intron 25.0%
!!! TTCAACATTTTAATCATGGT+AGG - chr5.2:76513046-76513065 None:intergenic 25.0%
AATAAGCTCTTTATCCAAAC+AGG - chr5.2:76512195-76512214 None:intergenic 30.0%
ACACAGATAGTATCCAAATT+AGG - chr5.2:76512622-76512641 None:intergenic 30.0%
ACCTATTAATTGTCGTAGTA+AGG + chr5.2:76513071-76513090 MS.gene017011:intron 30.0%
AGCAAAACTTACAAGATCAA+TGG - chr5.2:76512938-76512957 None:intergenic 30.0%
ATAAGCTCTTTATCCAAACA+GGG - chr5.2:76512194-76512213 None:intergenic 30.0%
ATGGAAATGGATAATATGCA+GGG - chr5.2:76515078-76515097 None:intergenic 30.0%
ATTAGAATCTTGGATGTAAG+GGG + chr5.2:76514598-76514617 MS.gene017011:intron 30.0%
ATTTAACTATCTCTATGGCA+TGG + chr5.2:76514423-76514442 MS.gene017011:intron 30.0%
CATAATGAATCACCTATATG+AGG - chr5.2:76514899-76514918 None:intergenic 30.0%
CTTCATCAAGAATAACAAAC+TGG - chr5.2:76512768-76512787 None:intergenic 30.0%
GTGTGTTCTTGTATCTTAAT+GGG + chr5.2:76514681-76514700 MS.gene017011:intron 30.0%
GTTGGTTGAAACTAAATTGA+TGG - chr5.2:76515365-76515384 None:intergenic 30.0%
GTTTGAATTGAAGCTAGATA+TGG + chr5.2:76512167-76512186 MS.gene017011:intron 30.0%
TAAAGATTGACAGATGGAAA+TGG - chr5.2:76515091-76515110 None:intergenic 30.0%
TACATTGTCTTATCTCATGA+AGG - chr5.2:76513228-76513247 None:intergenic 30.0%
TATGGTGAAAATAGATATGG+CGG + chr5.2:76515830-76515849 MS.gene017011:CDS 30.0%
TCGAAAAATAATCCTCTTGT+AGG + chr5.2:76513569-76513588 MS.gene017011:intron 30.0%
TGAATGATCTTATCCATGAT+GGG - chr5.2:76512084-76512103 None:intergenic 30.0%
TGCATATCCTCAATACTTAA+AGG - chr5.2:76512987-76513006 None:intergenic 30.0%
TGCTAGAATGAAATTACATG+TGG + chr5.2:76515336-76515355 MS.gene017011:intron 30.0%
TGGATACTATCTGTGTTTAT+GGG + chr5.2:76512626-76512645 MS.gene017011:CDS 30.0%
TTGGATACTATCTGTGTTTA+TGG + chr5.2:76512625-76512644 MS.gene017011:CDS 30.0%
TTTATACACAAGATCAATCC+AGG + chr5.2:76515000-76515019 MS.gene017011:CDS 30.0%
! AGAAGGCATACTTTAATTAG+AGG - chr5.2:76513474-76513493 None:intergenic 30.0%
! ATTTGAACTGAGATTTTCCT+TGG - chr5.2:76514025-76514044 None:intergenic 30.0%
! GATAATGCCTTTAAGTATTG+AGG + chr5.2:76512977-76512996 MS.gene017011:intron 30.0%
! GTTATTCTTTTGTATGCATC+TGG + chr5.2:76514755-76514774 MS.gene017011:intron 30.0%
! TTGTTTTCACGATTCTGTAT+AGG - chr5.2:76515452-76515471 None:intergenic 30.0%
!! AACATTTTAATCATGGTAGG+AGG - chr5.2:76513043-76513062 None:intergenic 30.0%
!! ATAAGTTTTGTGAGACTGTT+TGG - chr5.2:76512411-76512430 None:intergenic 30.0%
!! ATCAGTAACTTGAGTTTTGT+CGG - chr5.2:76515231-76515250 None:intergenic 30.0%
!! GTTCATGGTTCTATACATTT+TGG + chr5.2:76514708-76514727 MS.gene017011:intron 30.0%
!! TAAGTTTTGTGAGACTGTTT+GGG - chr5.2:76512410-76512429 None:intergenic 30.0%
!! TATAAAAGCATTGACAAGGA+GGG + chr5.2:76513955-76513974 MS.gene017011:intron 30.0%
!! TGATTATGGTGTTGATATAG+CGG + chr5.2:76512681-76512700 MS.gene017011:CDS 30.0%
!! TTATAAAAGCATTGACAAGG+AGG + chr5.2:76513954-76513973 MS.gene017011:intron 30.0%
!!! CATTTTGTTATTGTGTGAAC+TGG + chr5.2:76514200-76514219 MS.gene017011:intron 30.0%
!!! TTGAGCTTTTTTCCTCATAT+AGG + chr5.2:76514884-76514903 MS.gene017011:intron 30.0%
AGAAGATCAATAATTCGTCC+AGG - chr5.2:76512715-76512734 None:intergenic 35.0%
AGTCTCACAAAACTTATGCT+AGG + chr5.2:76512414-76512433 MS.gene017011:intron 35.0%
ATGAATTTAGGAAGCCGTTA+TGG + chr5.2:76513259-76513278 MS.gene017011:intron 35.0%
CTAAATGACCATAGCCATAA+CGG - chr5.2:76513276-76513295 None:intergenic 35.0%
CTGAATGATCTTATCCATGA+TGG - chr5.2:76512085-76512104 None:intergenic 35.0%
CTTACAAGATCAATGGTTAG+AGG - chr5.2:76512931-76512950 None:intergenic 35.0%
GAACACTTCAAAACATTAGG+AGG - chr5.2:76514326-76514345 None:intergenic 35.0%
GAACTCACAAGATCAACATT+AGG - chr5.2:76513804-76513823 None:intergenic 35.0%
GATACTATCTGTGTTTATGG+GGG + chr5.2:76512628-76512647 MS.gene017011:CDS 35.0%
GATGGAAATGGATAATATGC+AGG - chr5.2:76515079-76515098 None:intergenic 35.0%
GCCTTACTACGACAATTAAT+AGG - chr5.2:76513075-76513094 None:intergenic 35.0%
GGATAACTTTACGATGTCAA+TGG - chr5.2:76513844-76513863 None:intergenic 35.0%
GGATACTATCTGTGTTTATG+GGG + chr5.2:76512627-76512646 MS.gene017011:CDS 35.0%
GGTGTGTTCTTGTATCTTAA+TGG + chr5.2:76514680-76514699 MS.gene017011:intron 35.0%
GTGAAAAACACAACTCTTGT+TGG - chr5.2:76515383-76515402 None:intergenic 35.0%
GTTAACTGCTTTATCCAAGT+TGG - chr5.2:76512889-76512908 None:intergenic 35.0%
GTTGAAAATAGCACAAGTCA+AGG - chr5.2:76513509-76513528 None:intergenic 35.0%
TAACAGACTATCCAGAAAGT+AGG - chr5.2:76514170-76514189 None:intergenic 35.0%
TAACTTTACGATGTCAATGG+CGG - chr5.2:76513841-76513860 None:intergenic 35.0%
TACATCTGCAAGGGAAATAT+TGG + chr5.2:76514529-76514548 MS.gene017011:intron 35.0%
TATTGAACGCAAACCTGAAT+GGG - chr5.2:76511823-76511842 None:intergenic 35.0%
TCAAATAAGTCGATCCAAAC+AGG + chr5.2:76512448-76512467 MS.gene017011:intron 35.0%
TGCAAGGGAAATATTGGAAT+TGG + chr5.2:76514535-76514554 MS.gene017011:intron 35.0%
TTATGTTCTCTCCTACTTTC+TGG + chr5.2:76514156-76514175 MS.gene017011:intron 35.0%
TTATTGAACGCAAACCTGAA+TGG - chr5.2:76511824-76511843 None:intergenic 35.0%
TTCAAAACGAAAAGCTTCTG+CGG - chr5.2:76511695-76511714 None:intergenic 35.0%
! AATAGTCTTACCGTTATAGG+TGG + chr5.2:76513992-76514011 MS.gene017011:intron 35.0%
! ACTGGAAAAACTCTTGCTTT+TGG + chr5.2:76512054-76512073 MS.gene017011:CDS 35.0%
! AGATCAACAGTCAGTCATTT+TGG + chr5.2:76513320-76513339 MS.gene017011:intron 35.0%
! ATTCAGGTTTGCGTTCAATA+AGG + chr5.2:76511823-76511842 MS.gene017011:intron 35.0%
! CAATGGTTAGAGGATTTTTC+AGG - chr5.2:76512921-76512940 None:intergenic 35.0%
! GAGAATAGTCTTACCGTTAT+AGG + chr5.2:76513989-76514008 MS.gene017011:intron 35.0%
! TCTGGAAGTCTTTTGTGTTT+AGG + chr5.2:76514659-76514678 MS.gene017011:intron 35.0%
! TGTAGGCTGTAAATTTTCAG+AGG + chr5.2:76515046-76515065 MS.gene017011:CDS 35.0%
! TTCAGGTTTGCGTTCAATAA+GGG + chr5.2:76511824-76511843 MS.gene017011:intron 35.0%
!! ATCTTAATGGGTTCTGTTCA+TGG + chr5.2:76514693-76514712 MS.gene017011:intron 35.0%
!! CGGCCATTTTAATGTTTTAG+TGG + chr5.2:76513746-76513765 MS.gene017011:CDS 35.0%
!! CTGGAAAAACTCTTGCTTTT+GGG + chr5.2:76512055-76512074 MS.gene017011:CDS 35.0%
!! GTCAAAAAGTATTCCATGTG+AGG + chr5.2:76513665-76513684 MS.gene017011:CDS 35.0%
!!! GCTGTTCTATTTTTGTGACT+GGG + chr5.2:76512955-76512974 MS.gene017011:intron 35.0%
!!! TGCTGTTCTATTTTTGTGAC+TGG + chr5.2:76512954-76512973 MS.gene017011:intron 35.0%
!!! TTTTCTGGTTCAAGACAATC+TGG + chr5.2:76515779-76515798 MS.gene017011:CDS 35.0%
AAACAGGCCCATAGTGTAAT+TGG + chr5.2:76512464-76512483 MS.gene017011:intron 40.0%
AACCTGAATGGGAAAAAGCT+TGG - chr5.2:76511812-76511831 None:intergenic 40.0%
AACTTTACGATGTCAATGGC+GGG - chr5.2:76513840-76513859 None:intergenic 40.0%
AAGATCAATCCAGGACTCTT+AGG + chr5.2:76515009-76515028 MS.gene017011:CDS 40.0%
AATTACACTATGGGCCTGTT+TGG - chr5.2:76512465-76512484 None:intergenic 40.0%
AATTACTGTAGCCTCCAGAA+CGG - chr5.2:76515751-76515770 None:intergenic 40.0%
ATATCTTCTCCACATCTTCC+TGG - chr5.2:76512816-76512835 None:intergenic 40.0%
ATGAGAGTTTGTCTCTCAGT+GGG - chr5.2:76512850-76512869 None:intergenic 40.0%
ATGCAAGGTCGTGATATGAT+TGG + chr5.2:76512015-76512034 MS.gene017011:CDS 40.0%
ATGCTGTCTGAGCTTCAAAT+GGG + chr5.2:76514479-76514498 MS.gene017011:intron 40.0%
CACCAACAAAAGAACCAGAT+CGG - chr5.2:76515727-76515746 None:intergenic 40.0%
CGAGTACAGTGAAATTCCAT+CGG - chr5.2:76513412-76513431 None:intergenic 40.0%
CTCAACTCTTACATCTGCAA+GGG + chr5.2:76514520-76514539 MS.gene017011:intron 40.0%
CTCTTGTAGGAACATGCAAA+AGG + chr5.2:76513582-76513601 MS.gene017011:intron 40.0%
CTGTGAACTTATTGGTACCT+AGG + chr5.2:76513362-76513381 MS.gene017011:intron 40.0%
GAACTTATTGGTACCTAGGT+TGG + chr5.2:76513366-76513385 MS.gene017011:intron 40.0%
GACATGCATCATGAATGATC+TGG + chr5.2:76514641-76514660 MS.gene017011:intron 40.0%
GAGATATTTGTTCACCGATC+TGG + chr5.2:76514936-76514955 MS.gene017011:CDS 40.0%
GGAAGATGTGGAGAAGATAT+TGG + chr5.2:76512816-76512835 MS.gene017011:CDS 40.0%
TATCACAAGTCCAGAGAGAA+AGG + chr5.2:76513703-76513722 MS.gene017011:CDS 40.0%
TATGCTGTCTGAGCTTCAAA+TGG + chr5.2:76514478-76514497 MS.gene017011:intron 40.0%
TCATCGCTATTCGATTTCGA+AGG - chr5.2:76511721-76511740 None:intergenic 40.0%
TCGAAATCGAATAGCGATGA+GGG + chr5.2:76511721-76511740 MS.gene017011:CDS 40.0%
TGAGAAGGAATTCTACGAGT+CGG + chr5.2:76512594-76512613 MS.gene017011:CDS 40.0%
TGGATGTAAGGGGTAATGAT+AGG + chr5.2:76514608-76514627 MS.gene017011:intron 40.0%
TTCGAAATCGAATAGCGATG+AGG + chr5.2:76511720-76511739 MS.gene017011:CDS 40.0%
TTGGAAGTTCAGGTCAAGTA+TGG + chr5.2:76514258-76514277 MS.gene017011:intron 40.0%
TTGTAGGAACATGCAAAAGG+AGG + chr5.2:76513585-76513604 MS.gene017011:intron 40.0%
! AATGGCGGGAAAAAGGTAAA+AGG - chr5.2:76513826-76513845 None:intergenic 40.0%
! AATGTTATGCGAAAGCGCAT+TGG + chr5.2:76514099-76514118 MS.gene017011:intron 40.0%
! CTTTTGCATGTTCCTACAAG+AGG - chr5.2:76513584-76513603 None:intergenic 40.0%
! GCAGTATCAACGGCAATTTT+TGG - chr5.2:76515632-76515651 None:intergenic 40.0%
! GGGTTGTGATTTAGAGTGAA+AGG - chr5.2:76511632-76511651 None:intergenic 40.0%
! TTCAGCAAACAAGGTGGTTT+TGG + chr5.2:76515926-76515945 MS.gene017011:CDS 40.0%
!! ACTTGAGTTTTGTCGGTACT+TGG - chr5.2:76515224-76515243 None:intergenic 40.0%
!! TATGGTGTTGATATAGCGGT+TGG + chr5.2:76512685-76512704 MS.gene017011:CDS 40.0%
!!! ATCAGCGTCACGTTTTGTTT+GGG - chr5.2:76513628-76513647 None:intergenic 40.0%
!!! GTGGTGGTTTTGGAGATTTT+CGG + chr5.2:76515987-76516006 MS.gene017011:CDS 40.0%
!!! TGGTTTTGGAGATTTTCGGT+CGG + chr5.2:76515991-76516010 MS.gene017011:CDS 40.0%
AAGCTGGGAATTAAAGCAGG+AGG - chr5.2:76515189-76515208 None:intergenic 45.0%
AGATCTACTGCCTGAATCAC+CGG - chr5.2:76515888-76515907 None:intergenic 45.0%
AGTCTTACCGTTATAGGTGG+AGG + chr5.2:76513995-76514014 MS.gene017011:intron 45.0%
ATATCACGACCTTGCATAGC+AGG - chr5.2:76512012-76512031 None:intergenic 45.0%
CAAGGAACGATGGTATCAGA+AGG - chr5.2:76513491-76513510 None:intergenic 45.0%
CAGATGAGGCAGCTTGATTA+TGG + chr5.2:76512667-76512686 MS.gene017011:CDS 45.0%
CATGAGAGTTTGTCTCTCAG+TGG - chr5.2:76512851-76512870 None:intergenic 45.0%
CTCAATAGTCCTAAGAGTCC+TGG - chr5.2:76515021-76515040 None:intergenic 45.0%
CTGATCAGAATCTCCAACCT+AGG - chr5.2:76513382-76513401 None:intergenic 45.0%
CTGGTTCAAGACAATCTGGA+GGG + chr5.2:76515783-76515802 MS.gene017011:CDS 45.0%
GACAGACACAGTCATTGCAT+TGG - chr5.2:76513157-76513176 None:intergenic 45.0%
GACGCTGATCGAATATCACA+TGG + chr5.2:76513639-76513658 MS.gene017011:CDS 45.0%
GCTCAACTCTTACATCTGCA+AGG + chr5.2:76514519-76514538 MS.gene017011:intron 45.0%
GTAAGGCACATGAACCACAA+TGG + chr5.2:76513088-76513107 MS.gene017011:intron 45.0%
GTCAAGCTGGGAATTAAAGC+AGG - chr5.2:76515192-76515211 None:intergenic 45.0%
GTCTTACCGTTATAGGTGGA+GGG + chr5.2:76513996-76514015 MS.gene017011:intron 45.0%
TAGCACAAGTCAAGGAACGA+TGG - chr5.2:76513501-76513520 None:intergenic 45.0%
TCAGGATATTGTCGCTGCTT+TGG + chr5.2:76511771-76511790 MS.gene017011:CDS 45.0%
TCTCTGCAACAATGCCAACT+TGG + chr5.2:76512872-76512891 MS.gene017011:CDS 45.0%
TCTGATGCGTATGTCAAAGC+AGG + chr5.2:76513438-76513457 MS.gene017011:CDS 45.0%
TCTGGAGGCTACAGTAATTC+AGG + chr5.2:76515752-76515771 MS.gene017011:CDS 45.0%
TGCCTCATCTGTTGAGAGAT+CGG - chr5.2:76512658-76512677 None:intergenic 45.0%
TGCTTCGCAAGTTCTCTAGT+CGG - chr5.2:76512571-76512590 None:intergenic 45.0%
TGGAGATTCTGATCAGAAGC+TGG + chr5.2:76513386-76513405 MS.gene017011:CDS 45.0%
TGGTGTTTCACAGTCAAGCT+GGG - chr5.2:76515204-76515223 None:intergenic 45.0%
TGGTTCAAGACAATCTGGAG+GGG + chr5.2:76515784-76515803 MS.gene017011:CDS 45.0%
TGGTTTCCCTCCACCTATAA+CGG - chr5.2:76514005-76514024 None:intergenic 45.0%
TTAGGAAGCCGTTATGGCTA+TGG + chr5.2:76513265-76513284 MS.gene017011:intron 45.0%
TTATAGGTGGAGGGAAACCA+AGG + chr5.2:76514005-76514024 MS.gene017011:intron 45.0%
TTGATATGGCAGACGAGGAA+AGG + chr5.2:76512522-76512541 MS.gene017011:intron 45.0%
! AATTTTGTAGAGGGCTGTGC+TGG + chr5.2:76511984-76512003 MS.gene017011:intron 45.0%
! AGAAGAAGCGCGGAATAGTA+AGG - chr5.2:76511653-76511672 None:intergenic 45.0%
! ATGATTGGTCGAGCAAGAAC+AGG + chr5.2:76512030-76512049 MS.gene017011:CDS 45.0%
! CAACTGATGTTGCTTCACGT+GGG + chr5.2:76513769-76513788 MS.gene017011:CDS 45.0%
! CCCAACTTGAAGCATCTGAT+CGG - chr5.2:76512791-76512810 None:intergenic 45.0%
! CCGATCAGATGCTTCAAGTT+GGG + chr5.2:76512788-76512807 MS.gene017011:CDS 45.0%
! GAAGAAGCGCGGAATAGTAA+GGG - chr5.2:76511652-76511671 None:intergenic 45.0%
! GGGCACTTTTGTAAGACTTG+AGG - chr5.2:76515276-76515295 None:intergenic 45.0%
! TCTGGTGGATCAAGCTCATA+TGG + chr5.2:76515812-76515831 MS.gene017011:CDS 45.0%
! TCTGGTTCAAGACAATCTGG+AGG + chr5.2:76515782-76515801 MS.gene017011:CDS 45.0%
! TTGGTGTTTCACAGTCAAGC+TGG - chr5.2:76515205-76515224 None:intergenic 45.0%
! TTGTTTGCTGAATCCACCAG+AGG - chr5.2:76515918-76515937 None:intergenic 45.0%
! TTTGGTTGATATGGCAGACG+AGG + chr5.2:76512517-76512536 MS.gene017011:intron 45.0%
!! ACACTTGCTGGCTTCAGAAA+CGG + chr5.2:76513726-76513745 MS.gene017011:CDS 45.0%
!! AGTAATTCAGGCGGGTTTTC+TGG + chr5.2:76515764-76515783 MS.gene017011:CDS 45.0%
!! ATTCCATGTGAGGCATTGCA+TGG + chr5.2:76513675-76513694 MS.gene017011:CDS 45.0%
!! CACCAAGCTTTTTCCCATTC+AGG + chr5.2:76511807-76511826 MS.gene017011:CDS 45.0%
!! GATCAGCGTCACGTTTTGTT+TGG - chr5.2:76513629-76513648 None:intergenic 45.0%
!! TCTGGTGGATTCAGCAAACA+AGG + chr5.2:76515917-76515936 MS.gene017011:CDS 45.0%
!!! AGCAAACAAGGTGGTTTTGG+TGG + chr5.2:76515929-76515948 MS.gene017011:CDS 45.0%
!!! CAAGGTGGTTTTGGTGGATT+CGG + chr5.2:76515935-76515954 MS.gene017011:CDS 45.0%
!!! CGATCTGGTTCTTTTGTTGG+TGG + chr5.2:76515725-76515744 MS.gene017011:CDS 45.0%
!!! GGTTTTGGAGATTTTCGGTC+GGG + chr5.2:76515992-76516011 MS.gene017011:CDS 45.0%
!!! TGCTTTTGGGATACCCATCA+TGG + chr5.2:76512068-76512087 MS.gene017011:CDS 45.0%
AAATGGCCTGTCACTAGACG+TGG + chr5.2:76514066-76514085 MS.gene017011:intron 50.0%
AGCTAGATATGGGCCCTGTT+TGG + chr5.2:76512178-76512197 MS.gene017011:intron 50.0%
AGGACTATTGAGCGCGATGT+AGG + chr5.2:76515029-76515048 MS.gene017011:CDS 50.0%
AGTGAAAGGATCTTGCTGCG+AGG - chr5.2:76511618-76511637 None:intergenic 50.0%
AGTTGGGTTCCAGGAAGATG+TGG + chr5.2:76512804-76512823 MS.gene017011:CDS 50.0%
CAGAGAGAAAGGACACTTGC+TGG + chr5.2:76513714-76513733 MS.gene017011:CDS 50.0%
CAGCAAGTGTCCTTTCTCTC+TGG - chr5.2:76513716-76513735 None:intergenic 50.0%
CATCAACCACGTCTAGTGAC+AGG - chr5.2:76514075-76514094 None:intergenic 50.0%
CCTCATCTGTTGAGAGATCG+GGG - chr5.2:76512656-76512675 None:intergenic 50.0%
GACTAGAGAACTTGCGAAGC+AGG + chr5.2:76512570-76512589 MS.gene017011:CDS 50.0%
GAGGCTACAGTAATTCAGGC+GGG + chr5.2:76515756-76515775 MS.gene017011:CDS 50.0%
GATTCAGGCAGTAGATCTGG+TGG + chr5.2:76515890-76515909 MS.gene017011:CDS 50.0%
GCCCAGTGATGCAGTATCAA+CGG - chr5.2:76515642-76515661 None:intergenic 50.0%
GCCGATCAGATGCTTCAAGT+TGG + chr5.2:76512787-76512806 MS.gene017011:CDS 50.0%
GCCGTTGATACTGCATCACT+GGG + chr5.2:76515638-76515657 MS.gene017011:CDS 50.0%
GCCTCATCTGTTGAGAGATC+GGG - chr5.2:76512657-76512676 None:intergenic 50.0%
GGAGGCTACAGTAATTCAGG+CGG + chr5.2:76515755-76515774 MS.gene017011:CDS 50.0%
GGTGATTCAGGCAGTAGATC+TGG + chr5.2:76515887-76515906 MS.gene017011:CDS 50.0%
GGTTCAAGACAATCTGGAGG+GGG + chr5.2:76515785-76515804 MS.gene017011:CDS 50.0%
GTCTTGAGATCGCGAAGCTT+GGG + chr5.2:76511743-76511762 MS.gene017011:CDS 50.0%
GTTCAAGACAATCTGGAGGG+GGG + chr5.2:76515786-76515805 MS.gene017011:CDS 50.0%
GTTGATACTGCATCACTGGG+CGG + chr5.2:76515641-76515660 MS.gene017011:CDS 50.0%
TCTCCATGCAATGCCTCACA+TGG - chr5.2:76513681-76513700 None:intergenic 50.0%
TGCCGTTGATACTGCATCAC+TGG + chr5.2:76515637-76515656 MS.gene017011:CDS 50.0%
! ACTGGTCGTGCTGGTAAGAA+AGG + chr5.2:76514963-76514982 MS.gene017011:CDS 50.0%
! ACTTGCGAAGCAGGTTGAGA+AGG + chr5.2:76512579-76512598 MS.gene017011:CDS 50.0%
! AGGAAAGGATCCTCTGGCTT+TGG + chr5.2:76512537-76512556 MS.gene017011:CDS 50.0%
! AGTAGATCTGGTGGATCCTC+TGG + chr5.2:76515899-76515918 MS.gene017011:CDS 50.0%
! ATTTGGTGATCGTCGTGGCA+GGG + chr5.2:76516027-76516046 MS.gene017011:CDS 50.0%
! CGATGTCAATGGCGGGAAAA+AGG - chr5.2:76513833-76513852 None:intergenic 50.0%
! GATATAGCGGTTGGTACACC+TGG + chr5.2:76512694-76512713 MS.gene017011:CDS 50.0%
! GATTTTCGGTCGGGTAAACC+TGG + chr5.2:76516001-76516020 MS.gene017011:CDS 50.0%
! GCAACTGATGTTGCTTCACG+TGG + chr5.2:76513768-76513787 MS.gene017011:CDS 50.0%
! GGATCAAGCTCTGGTCGTTT+CGG + chr5.2:76515851-76515870 MS.gene017011:CDS 50.0%
! GGTGGATTCAGCAAACAAGG+TGG + chr5.2:76515920-76515939 MS.gene017011:CDS 50.0%
! TCCTTTGGTTCCGGTGATTC+AGG + chr5.2:76515875-76515894 MS.gene017011:CDS 50.0%
!! AGATATGGCGGATCAAGCTC+TGG + chr5.2:76515842-76515861 MS.gene017011:CDS 50.0%
!! GATGCTTCAAGTTGGGTTCC+AGG + chr5.2:76512795-76512814 MS.gene017011:CDS 50.0%
!! GGTGGTGGAGAAGAGAATCT+CGG - chr5.2:76511575-76511594 None:intergenic 50.0%
!! GTCGCTGCTTTGGAGAAGAA+AGG + chr5.2:76511781-76511800 MS.gene017011:CDS 50.0%
!! TTTAGTGGTGGCGGCAGATT+TGG + chr5.2:76515665-76515684 MS.gene017011:CDS 50.0%
!!! GGATCCTCTGGCTTTGGTTT+TGG + chr5.2:76512543-76512562 MS.gene017011:CDS 50.0%
!!! GGCCGATCTGGTTCTTTTGT+TGG + chr5.2:76515722-76515741 MS.gene017011:CDS 50.0%
!!! TCTTTTGTTGGTGGCCGTTC+TGG + chr5.2:76515734-76515753 MS.gene017011:CDS 50.0%
AGGATCTTGCTGCGAGGTGA+CGG - chr5.2:76511612-76511631 None:intergenic 55.0%
CACGACCAGTTCGTCCAGAT+CGG - chr5.2:76514953-76514972 None:intergenic 55.0%
CAGACGAGGAAAGGATCCTC+TGG + chr5.2:76512531-76512550 MS.gene017011:intron 55.0%
CCCCGATCTCTCAACAGATG+AGG + chr5.2:76512653-76512672 MS.gene017011:CDS 55.0%
CGCGAAGCTTGGGATTTCTC+AGG + chr5.2:76511753-76511772 MS.gene017011:CDS 55.0%
CTACGAGTCGGCGCCTAATT+TGG + chr5.2:76512606-76512625 MS.gene017011:CDS 55.0%
GCCTGAATCACCGGAACCAA+AGG - chr5.2:76515879-76515898 None:intergenic 55.0%
GCGCTTCTTCAACCCTCTCA+CGG + chr5.2:76511530-76511549 MS.gene017011:CDS 55.0%
GGTCGAGCAAGAACAGGAAC+TGG + chr5.2:76512036-76512055 MS.gene017011:CDS 55.0%
GGTCTTGAGATCGCGAAGCT+TGG + chr5.2:76511742-76511761 MS.gene017011:CDS 55.0%
GGTGGAGAAGAGAATCTCGG+CGG - chr5.2:76511572-76511591 None:intergenic 55.0%
GTGCTGGAACCTGCTATGCA+AGG + chr5.2:76512000-76512019 MS.gene017011:CDS 55.0%
GTTCACCGATCTGGACGAAC+TGG + chr5.2:76514945-76514964 MS.gene017011:CDS 55.0%
TCGGGTAAACCTGGCGCATT+TGG + chr5.2:76516010-76516029 MS.gene017011:CDS 55.0%
TCTGATCAGAAGCTGGCCGA+TGG + chr5.2:76513393-76513412 MS.gene017011:CDS 55.0%
TCTGGTCGTTTCGGCTCCTT+TGG + chr5.2:76515860-76515879 MS.gene017011:CDS 55.0%
! AGAAGCGCGTCTGAGGATAG+TGG - chr5.2:76511518-76511537 None:intergenic 55.0%
! AGATCTGGTGGATCCTCTGG+TGG + chr5.2:76515902-76515921 MS.gene017011:CDS 55.0%
! CAATCTGGAGGGGGGTTTTC+TGG + chr5.2:76515794-76515813 MS.gene017011:CDS 55.0%
! CATTTGGTGATCGTCGTGGC+AGG + chr5.2:76516026-76516045 MS.gene017011:CDS 55.0%
! CGTTTCGGCTCCTTTGGTTC+CGG + chr5.2:76515866-76515885 MS.gene017011:CDS 55.0%
! GCATCACTGGGCGGATTTAG+TGG + chr5.2:76515650-76515669 MS.gene017011:CDS 55.0%
! TCACTGGGCGGATTTAGTGG+TGG + chr5.2:76515653-76515672 MS.gene017011:CDS 55.0%
!! TCGGATCGCTCTGGTGGATT+CGG + chr5.2:76515965-76515984 MS.gene017011:CDS 55.0%
!! TGGTGGATTCGGTGGTGGTT+CGG + chr5.2:76515946-76515965 MS.gene017011:CDS 55.0%
!! TTTGTTGGTGGCCGTTCTGG+AGG + chr5.2:76515737-76515756 MS.gene017011:CDS 55.0%
!!! GGTGGATTCGGTGGTGGTTT+TGG + chr5.2:76515977-76515996 MS.gene017011:CDS 55.0%
!!! GGTGGTTTTGGTGGATTCGG+TGG + chr5.2:76515938-76515957 MS.gene017011:CDS 55.0%
!!! GGTTTTGGTGGATTCGGTGG+TGG + chr5.2:76515941-76515960 MS.gene017011:CDS 55.0%
CGACGATCACCAAATGCGCC+AGG - chr5.2:76516022-76516041 None:intergenic 60.0%
CGCGAGAAGCAGAAGAAGCG+CGG - chr5.2:76511663-76511682 None:intergenic 60.0%
GCTTCTTCTGCTTCTCGCGC+TGG + chr5.2:76511664-76511683 MS.gene017011:CDS 60.0%
GGAGAAGAGAATCTCGGCGG+CGG - chr5.2:76511569-76511588 None:intergenic 60.0%
GGCGCCAAAACCAAAGCCAG+AGG - chr5.2:76512550-76512569 None:intergenic 60.0%
TCTGGACGAACTGGTCGTGC+TGG + chr5.2:76514954-76514973 MS.gene017011:CDS 60.0%
! CTGGGCGGATTTAGTGGTGG+CGG + chr5.2:76515656-76515675 MS.gene017011:CDS 60.0%
! GGCGCATTTGGTGATCGTCG+TGG + chr5.2:76516022-76516041 MS.gene017011:CDS 60.0%
! GGGTTGAAGAAGCGCGTCTG+AGG - chr5.2:76511525-76511544 None:intergenic 60.0%
! TCTGGAGGGGGGTTTTCTGG+TGG + chr5.2:76515797-76515816 MS.gene017011:CDS 60.0%
!! AGATTTGGTGGTGGCGGTGG+TGG + chr5.2:76515680-76515699 MS.gene017011:CDS 60.0%
!! AGTGGTGGCGGCAGATTTGG+TGG + chr5.2:76515668-76515687 MS.gene017011:CDS 60.0%
!! CGGTGGTGGATTTGGTGGTG+GGG + chr5.2:76515694-76515713 MS.gene017011:CDS 60.0%
!! GATCGCTCTGGTGGATTCGG+TGG + chr5.2:76515968-76515987 MS.gene017011:CDS 60.0%
!! GCGGTGGTGGATTTGGTGGT+GGG + chr5.2:76515693-76515712 MS.gene017011:CDS 60.0%
!! GGTGGTGGATTTGGTGGTGG+GGG + chr5.2:76515695-76515714 MS.gene017011:CDS 60.0%
AAGAGAATCTCGGCGGCGGC+GGG - chr5.2:76511565-76511584 None:intergenic 65.0%
GAAGAGAATCTCGGCGGCGG+CGG - chr5.2:76511566-76511585 None:intergenic 65.0%
GGGGATGGTTCGCCGTGAGA+GGG - chr5.2:76511545-76511564 None:intergenic 65.0%
! GGTGGTGGTTCGGATCGCTC+TGG + chr5.2:76515956-76515975 MS.gene017011:CDS 65.0%
! GGTGGTTCGGATCGCTCTGG+TGG + chr5.2:76515959-76515978 MS.gene017011:CDS 65.0%
!! CGCTCTGGTGGATTCGGTGG+TGG + chr5.2:76515971-76515990 MS.gene017011:CDS 65.0%
!! GAGGTGACGGAGCTCAGTGG+CGG - chr5.2:76511599-76511618 None:intergenic 65.0%
!! GGATTTGGTGGTGGGGGTGG+TGG + chr5.2:76515701-76515720 MS.gene017011:CDS 65.0%
!! GGCAGATTTGGTGGTGGCGG+TGG + chr5.2:76515677-76515696 MS.gene017011:CDS 65.0%
!! GGCGGCAGATTTGGTGGTGG+CGG + chr5.2:76515674-76515693 MS.gene017011:CDS 65.0%
!! GGCGGTGGTGGATTTGGTGG+TGG + chr5.2:76515692-76515711 MS.gene017011:CDS 65.0%
!! GGTGGATTTGGTGGTGGGGG+TGG + chr5.2:76515698-76515717 MS.gene017011:CDS 65.0%
!! GGTGGCGGCAGATTTGGTGG+TGG + chr5.2:76515671-76515690 MS.gene017011:CDS 65.0%
!! GGTGGCGGTGGTGGATTTGG+TGG + chr5.2:76515689-76515708 MS.gene017011:CDS 65.0%
!! GGTGGTGGCGGTGGTGGATT+TGG + chr5.2:76515686-76515705 MS.gene017011:CDS 65.0%
!! TGCGAGGTGACGGAGCTCAG+TGG - chr5.2:76511602-76511621 None:intergenic 65.0%
AGAGAATCTCGGCGGCGGCG+GGG - chr5.2:76511564-76511583 None:intergenic 70.0%
CGGGGATGGTTCGCCGTGAG+AGG - chr5.2:76511546-76511565 None:intergenic 70.0%
! GTGACGGAGCTCAGTGGCGG+CGG - chr5.2:76511596-76511615 None:intergenic 70.0%
AATCTCGGCGGCGGCGGGGA+TGG - chr5.2:76511560-76511579 None:intergenic 75.0%
ACGGAGCTCAGTGGCGGCGG+TGG - chr5.2:76511593-76511612 None:intergenic 75.0%
GAGCTCAGTGGCGGCGGTGG+TGG - chr5.2:76511590-76511609 None:intergenic 75.0%
! GGTGGGGGTGGTGGCCGATC+TGG + chr5.2:76515710-76515729 MS.gene017011:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 76511508 76516054 76511508 ID=MS.gene017011
chr5.2 mRNA 76511508 76516054 76511508 ID=MS.gene017011.t1;Parent=MS.gene017011
chr5.2 exon 76511508 76511828 76511508 ID=MS.gene017011.t1.exon1;Parent=MS.gene017011.t1
chr5.2 CDS 76511508 76511828 76511508 ID=cds.MS.gene017011.t1;Parent=MS.gene017011.t1
chr5.2 exon 76511994 76512121 76511994 ID=MS.gene017011.t1.exon2;Parent=MS.gene017011.t1
chr5.2 CDS 76511994 76512121 76511994 ID=cds.MS.gene017011.t1;Parent=MS.gene017011.t1
chr5.2 exon 76512534 76512945 76512534 ID=MS.gene017011.t1.exon3;Parent=MS.gene017011.t1
chr5.2 CDS 76512534 76512945 76512534 ID=cds.MS.gene017011.t1;Parent=MS.gene017011.t1
chr5.2 exon 76513384 76513482 76513384 ID=MS.gene017011.t1.exon4;Parent=MS.gene017011.t1
chr5.2 CDS 76513384 76513482 76513384 ID=cds.MS.gene017011.t1;Parent=MS.gene017011.t1
chr5.2 exon 76513591 76513815 76513591 ID=MS.gene017011.t1.exon5;Parent=MS.gene017011.t1
chr5.2 CDS 76513591 76513815 76513591 ID=cds.MS.gene017011.t1;Parent=MS.gene017011.t1
chr5.2 exon 76514906 76515067 76514906 ID=MS.gene017011.t1.exon6;Parent=MS.gene017011.t1
chr5.2 CDS 76514906 76515067 76514906 ID=cds.MS.gene017011.t1;Parent=MS.gene017011.t1
chr5.2 exon 76515626 76516054 76515626 ID=MS.gene017011.t1.exon7;Parent=MS.gene017011.t1
chr5.2 CDS 76515626 76516054 76515626 ID=cds.MS.gene017011.t1;Parent=MS.gene017011.t1
Gene Sequence

>MS.gene017011

ATGATTACCACTATCCTCAGACGCGCTTCTTCAACCCTCTCACGGCGAACCATCCCCGCCGCCGCCGAGATTCTCTTCTCCACCACCGCCGCCACTGAGCTCCGTCACCTCGCAGCAAGATCCTTTCACTCTAAATCACAACCCTTACTATTCCGCGCTTCTTCTGCTTCTCGCGCTGGTTACGCCGCAGAAGCTTTTCGTTTTGAAGAACCTTCGAAATCGAATAGCGATGAGGGTCTTGAGATCGCGAAGCTTGGGATTTCTCAGGATATTGTCGCTGCTTTGGAGAAGAAAGGAATCACCAAGCTTTTTCCCATTCAGGTTTGCGTTCAATAAGGGTTTTGAAACTAATTACGTAAATTATGATTTGTGATTAATTGTACTAATAATTATCAAATTAAGTTAATTTAAGCTGTTGTTAACTTTGTTTATTCATTTGTTTGTCAAAAAAATAAACTTTATTTGTTAATTTGTTGAATTTTGTAGAGGGCTGTGCTGGAACCTGCTATGCAAGGTCGTGATATGATTGGTCGAGCAAGAACAGGAACTGGAAAAACTCTTGCTTTTGGGATACCCATCATGGATAAGATCATTCAGTTTAATGCTAAACATGGGTTTGTTCTTTAGATATTATTGATTAATTGGAATTTTTTTTTTCTGTTTGAATTGAAGCTAGATATGGGCCCTGTTTGGATAAAGAGCTTATTTGCAGCTTATAGCATAAGTGCTTATGATGATAAGTGCTTATGTATAAGCTATTTCTATAGCAAAAACTGAAATGAAGTTAAATTGTTTTTGGTATAATCTATAAACTGTTTTGGTTAGATATCTTAGAGAATTTGTGAAAATAAGTTGAAAACAGCTTATGAACAATGTCATAAGCTGTTTTTAGAAGTTCTCCCAAACAGTCTCACAAAACTTATGCTAGGAGATAATAAGCTCAAATAAGTCGATCCAAACAGGCCCATAGTGTAATTGGTATCTTTAACTGTTAAGTTTACATCTTTTTTTTGGTTGATATGGCAGACGAGGAAAGGATCCTCTGGCTTTGGTTTTGGCGCCGACTAGAGAACTTGCGAAGCAGGTTGAGAAGGAATTCTACGAGTCGGCGCCTAATTTGGATACTATCTGTGTTTATGGGGGTACCCCGATCTCTCAACAGATGAGGCAGCTTGATTATGGTGTTGATATAGCGGTTGGTACACCTGGACGAATTATTGATCTTCTTAATAGAGGTGCTCTAAATTTGAAAGAAGTCCAGTTTGTTATTCTTGATGAAGCCGATCAGATGCTTCAAGTTGGGTTCCAGGAAGATGTGGAGAAGATATTGGAGAGATTACCCACTGAGAGACAAACTCTCATGTTCTCTGCAACAATGCCAACTTGGATAAAGCAGTTAACACGCAATTACCTGAAAAATCCTCTAACCATTGATCTTGTAAGTTTTGCTGTTCTATTTTTGTGACTGGGATAATGCCTTTAAGTATTGAGGATATGCATTATTGAAGTTTTGTCAAATGTTGCTTGAATAGCCTCCTACCATGATTAAAATGTTGAAAATAAACCTATTAATTGTCGTAGTAAGGCACATGAACCACAATGGAATATTATAACATTTGATTGATAAGTAGTATAATAAAAGTATACCAATGCAATGACTGTGTCTGTCTGTGTATCATACTCGAAAAAATTTGGGTTTCAATGAATTTATTTTCATCCTTCATGAGATAAGACAATGTAAATTTTTGTATATGAATTTAGGAAGCCGTTATGGCTATGGTCATTTAGAAGTATATGGAATAATACTCTTTGAGATCAACAGTCAGTCATTTTGGTTTATTGAATACTATTTAACTGTGAACTTATTGGTACCTAGGTTGGAGATTCTGATCAGAAGCTGGCCGATGGAATTTCACTGTACTCGATTCTATCTGATGCGTATGTCAAAGCAGGAATTATTGTTCCTCTAATTAAAGTATGCCTTCTGATACCATCGTTCCTTGACTTGTGCTATTTTCAACTAATGATCCATCATATAATCCTCTTAATTTTGTTTTCTCTTCGAAAAATAATCCTCTTGTAGGAACATGCAAAAGGAGGAAAGTGTATTGTTTTCACCCAAACAAAACGTGACGCTGATCGAATATCACATGGCATGTCAAAAAGTATTCCATGTGAGGCATTGCATGGAGATATATCACAAGTCCAGAGAGAAAGGACACTTGCTGGCTTCAGAAACGGCCATTTTAATGTTTTAGTGGCAACTGATGTTGCTTCACGTGGGCTCGATATACCTAATGTTGATCTTGTGAGTTCCTTTTACCTTTTTCCCGCCATTGACATCGTAAAGTTATCCAATATATTTTATTCCATATATTAATACAGATATAAAATGATGTAACCCTGTTATAACAAAAAAATATTTAGTCCCGTCTTAAAAAAAAACTTATAAAAGCATTGACAAGGAGGGTAGACTGAACAGAGAATAGTCTTACCGTTATAGGTGGAGGGAAACCAAGGAAAATCTCAGTTCAAATCTAAGAGAAATATTTGGATTTAAATGGCCTGTCACTAGACGTGGTTGATGATAAAATGTTATGCGAAAGCGCATTGGTTGTTTCTGTCATTTGAAGTTCAAGAGAAATCTCTTATGTTCTCTCCTACTTTCTGGATAGTCTGTTAACTATCTACACATTTTGTTATTGTGTGAACTGGATTTTCTATTCTTTGCACATGCATTAATTTTTTATTTGGAAGTTCAGGTCAAGTATGGTAGATTTTAGTGAACAGCTACTGATATTTATCATAAGTATTTCCTCCTAATGTTTTGAAGTGTTCATTTCAGATCATATAGTATTCTTCAAAATTTGCATTACGCATGCTACTTCTGTGCTTCTATAATTTTTTTTGTTATTATTTAACTATCTCTATGGCATGGATTTAAACATTCATTCGTTCATTCTTGTGTGCTATGCTGTCTGAGCTTCAAATGGGATAATTTTGTGACAGATGCTCAACTCTTACATCTGCAAGGGAAATATTGGAATTGGAATAAATGTTTTTTTTGTTTTCGGATGTAGAAAATTAGATATTAGAATCTTGGATGTAAGGGGTAATGATAGGATCAAAAAACGACATGCATCATGAATGATCTGGAAGTCTTTTGTGTTTAGGTGTGTTCTTGTATCTTAATGGGTTCTGTTCATGGTTCTATACATTTTGGAACATTATTAGTTTTTTTTTTGGTGTTATTCTTTTGTATGCATCTGGTCTTTTTTGATTTCATATGCCTAAATTAGTGTAATAAGTTACATGCATTTGCAAATACTTTAACGCAACAATTTTGTTAATATGTTATTTTCTATATATGTGAAATTTGAGCTTTTTTCCTCATATAGGTGATTCATTATGAACTTCCCAATAATTCAGAGATATTTGTTCACCGATCTGGACGAACTGGTCGTGCTGGTAAGAAAGGAACTGCTATTCTTGTTTATACACAAGATCAATCCAGGACTCTTAGGACTATTGAGCGCGATGTAGGCTGTAAATTTTCAGAGGTACTCTCCCTGCATATTATCCATTTCCATCTGTCAATCTTTATTACTTGAAGTTGCACCTTGTTTATTACTATTTTTCTGGTTTTAGAAATTAGACTACATTTAAAGGGTAGCATATCCTCCTGCTTTAATTCCCAGCTTGACTGTGAAACACCAAGTACCGACAAAACTCAAGTTACTGATAATCTAAATTTAGTCTGGCACTCCTCAAGTCTTACAAAAGTGCCCACTTGTTTTCATATTATATTCTGTTTTTAAAGTTTAAAACTGCTAGAATGAAATTACATGTGGAACCCATCAATTTAGTTTCAACCAACAAGAGTTGTGTTTTTCACATTATATTTGAAGTTGTGTTTCTAGCTCTTAATGTTTTCATTCTTTCCTATACAGAATCGTGAAAACAAAGTGATAATTACTATCCTCAAGTTATTATTATATCATTATTTTATTCATAGTGTGATTGTTGCTACAATTACTTTATGCCAGTTGTTAATTTATTTTTTAATGGTCTGTTAAGATTAATGATCACTCTTTTTTCCAAATATTCACGTTTAACAGTTACCAAAAATTGCCGTTGATACTGCATCACTGGGCGGATTTAGTGGTGGCGGCAGATTTGGTGGTGGCGGTGGTGGATTTGGTGGTGGGGGTGGTGGCCGATCTGGTTCTTTTGTTGGTGGCCGTTCTGGAGGCTACAGTAATTCAGGCGGGTTTTCTGGTTCAAGACAATCTGGAGGGGGGTTTTCTGGTGGATCAAGCTCATATGGTGAAAATAGATATGGCGGATCAAGCTCTGGTCGTTTCGGCTCCTTTGGTTCCGGTGATTCAGGCAGTAGATCTGGTGGATCCTCTGGTGGATTCAGCAAACAAGGTGGTTTTGGTGGATTCGGTGGTGGTTCGGATCGCTCTGGTGGATTCGGTGGTGGTTTTGGAGATTTTCGGTCGGGTAAACCTGGCGCATTTGGTGATCGTCGTGGCAGGGATTAG
Protein sequence

>MS.gene017011.t1

MITTILRRASSTLSRRTIPAAAEILFSTTAATELRHLAARSFHSKSQPLLFRASSASRAGYAAEAFRFEEPSKSNSDEGLEIAKLGISQDIVAALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQFNAKHGRGKDPLALVLAPTRELAKQVEKEFYESAPNLDTICVYGGTPISQQMRQLDYGVDIAVGTPGRIIDLLNRGALNLKEVQFVILDEADQMLQVGFQEDVEKILERLPTERQTLMFSATMPTWIKQLTRNYLKNPLTIDLVGDSDQKLADGISLYSILSDAYVKAGIIVPLIKEHAKGGKCIVFTQTKRDADRISHGMSKSIPCEALHGDISQVQRERTLAGFRNGHFNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVYTQDQSRTLRTIERDVGCKFSELPKIAVDTASLGGFSGGGRFGGGGGGFGGGGGGRSGSFVGGRSGGYSNSGGFSGSRQSGGGFSGGSSSYGENRYGGSSSGRFGSFGSGDSGSRSGGSSGGFSKQGGFGGFGGGSDRSGGFGGGFGDFRSGKPGAFGDRRGRD