Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017881.t1 | XP_003625145.2 | 98 | 983 | 20 | 0 | 6 | 988 | 1 | 983 | 0.00E+00 | 1744.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017881.t1 | O81644 | 71.0 | 983 | 274 | 6 | 9 | 988 | 2 | 976 | 0.0e+00 | 1314.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017881.t1 | G7KTI5 | 98.0 | 983 | 20 | 0 | 6 | 988 | 1 | 983 | 0.0e+00 | 1744.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene82765 | MS.gene017881 | PPI |
| MS.gene034501 | MS.gene017881 | PPI |
| MS.gene017881 | MS.gene055991 | PPI |
| MS.gene017881 | MS.gene70072 | PPI |
| MS.gene017881 | MS.gene037502 | PPI |
| MS.gene45491 | MS.gene017881 | PPI |
| MS.gene017881 | MS.gene053110 | PPI |
| MS.gene017881 | MS.gene70077 | PPI |
| MS.gene017992 | MS.gene017881 | PPI |
| MS.gene017881 | MS.gene057833 | PPI |
| MS.gene017881 | MS.gene057841 | PPI |
| MS.gene017881 | MS.gene37274 | PPI |
| MS.gene017881 | MS.gene04628 | PPI |
| MS.gene057838 | MS.gene017881 | PPI |
| MS.gene31154 | MS.gene017881 | PPI |
| MS.gene017881 | MS.gene032698 | PPI |
| MS.gene017881 | MS.gene30959 | PPI |
| MS.gene017881 | MS.gene45493 | PPI |
| MS.gene017881 | MS.gene70078 | PPI |
| MS.gene017881 | MS.gene37081 | PPI |
| MS.gene017881 | MS.gene052120 | PPI |
| MS.gene017881 | MS.gene52664 | PPI |
| MS.gene017881 | MS.gene49850 | PPI |
| MS.gene017881 | MS.gene000108 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017881.t1 | MTR_7g091460 | 97.762 | 983 | 22 | 0 | 6 | 988 | 1 | 983 | 0.0 | 1991 |
| MS.gene017881.t1 | MTR_4g127660 | 46.640 | 997 | 481 | 14 | 6 | 988 | 1 | 960 | 0.0 | 895 |
| MS.gene017881.t1 | MTR_2g036860 | 46.076 | 994 | 493 | 12 | 6 | 988 | 1 | 962 | 0.0 | 873 |
| MS.gene017881.t1 | MTR_3g463530 | 39.289 | 985 | 495 | 17 | 6 | 988 | 1 | 884 | 0.0 | 687 |
| MS.gene017881.t1 | MTR_3g463530 | 42.447 | 801 | 433 | 11 | 6 | 792 | 1 | 787 | 0.0 | 642 |
| MS.gene017881.t1 | MTR_3g463530 | 43.562 | 730 | 400 | 8 | 6 | 733 | 1 | 720 | 0.0 | 622 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017881.t1 | AT2G41740 | 71.255 | 988 | 263 | 11 | 9 | 988 | 2 | 976 | 0.0 | 1404 |
| MS.gene017881.t1 | AT2G41740 | 71.255 | 988 | 263 | 11 | 9 | 988 | 2 | 976 | 0.0 | 1404 |
| MS.gene017881.t1 | AT3G57410 | 71.777 | 985 | 256 | 8 | 6 | 988 | 1 | 965 | 0.0 | 1375 |
| MS.gene017881.t1 | AT3G57410 | 71.777 | 985 | 256 | 8 | 6 | 988 | 1 | 965 | 0.0 | 1375 |
| MS.gene017881.t1 | AT3G57410 | 71.777 | 985 | 256 | 8 | 6 | 988 | 1 | 965 | 0.0 | 1375 |
| MS.gene017881.t1 | AT3G57410 | 71.777 | 985 | 256 | 8 | 6 | 988 | 1 | 965 | 0.0 | 1375 |
| MS.gene017881.t1 | AT3G57410 | 71.777 | 985 | 256 | 8 | 6 | 988 | 1 | 965 | 0.0 | 1375 |
| MS.gene017881.t1 | AT3G57410 | 71.777 | 985 | 256 | 8 | 6 | 988 | 1 | 965 | 0.0 | 1375 |
| MS.gene017881.t1 | AT3G57410 | 71.777 | 985 | 256 | 8 | 6 | 988 | 1 | 965 | 0.0 | 1375 |
| MS.gene017881.t1 | AT3G57410 | 71.777 | 985 | 256 | 8 | 6 | 988 | 1 | 965 | 0.0 | 1375 |
| MS.gene017881.t1 | AT3G57410 | 76.972 | 786 | 177 | 3 | 6 | 791 | 1 | 782 | 0.0 | 1269 |
| MS.gene017881.t1 | AT3G57410 | 78.404 | 727 | 155 | 2 | 6 | 732 | 1 | 725 | 0.0 | 1219 |
| MS.gene017881.t1 | AT4G30160 | 46.760 | 1003 | 485 | 12 | 6 | 988 | 1 | 974 | 0.0 | 886 |
| MS.gene017881.t1 | AT4G30160 | 46.760 | 1003 | 485 | 12 | 6 | 988 | 1 | 974 | 0.0 | 886 |
| MS.gene017881.t1 | AT4G30160 | 46.760 | 1003 | 485 | 12 | 6 | 988 | 1 | 974 | 0.0 | 886 |
| MS.gene017881.t1 | AT4G30160 | 46.489 | 1011 | 485 | 13 | 6 | 988 | 1 | 983 | 0.0 | 881 |
| MS.gene017881.t1 | AT5G57320 | 45.391 | 998 | 494 | 14 | 6 | 988 | 1 | 962 | 0.0 | 871 |
| MS.gene017881.t1 | AT5G57320 | 45.391 | 998 | 494 | 14 | 6 | 988 | 1 | 962 | 0.0 | 871 |
| MS.gene017881.t1 | AT2G29890 | 38.191 | 995 | 541 | 15 | 6 | 988 | 1 | 933 | 0.0 | 647 |
| MS.gene017881.t1 | AT2G29890 | 37.928 | 994 | 521 | 15 | 6 | 988 | 1 | 909 | 0.0 | 643 |
| MS.gene017881.t1 | AT2G29890 | 37.928 | 994 | 521 | 15 | 6 | 988 | 1 | 909 | 0.0 | 643 |
| MS.gene017881.t1 | AT2G29890 | 37.889 | 995 | 522 | 15 | 6 | 988 | 1 | 911 | 0.0 | 642 |
| MS.gene017881.t1 | AT2G29890 | 37.626 | 994 | 507 | 17 | 6 | 988 | 1 | 892 | 0.0 | 626 |
Find 216 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCGCTCTTATTCGAATTTC+TGG | 0.068339 | 7.3:+17640012 | MS.gene017881:CDS |
| GAACAGAAACCTCAACTTTC+TGG | 0.147823 | 7.3:+17640567 | MS.gene017881:CDS |
| AGTCAGACTCAGGTGAATTT+TGG | 0.155578 | 7.3:+17635674 | MS.gene017881:CDS |
| TGAATTGAATGCATTATTTA+AGG | 0.185769 | 7.3:-17642863 | None:intergenic |
| GAACAACAAATGCTATTTAT+TGG | 0.194603 | 7.3:+17638353 | MS.gene017881:CDS |
| TTAAATCCAACTTTGATTCT+TGG | 0.208519 | 7.3:+17638610 | MS.gene017881:CDS |
| CCATTCCTGCTCAACTTTAC+AGG | 0.213990 | 7.3:+17635764 | MS.gene017881:CDS |
| TGAACTAAATGCAGAGTTTA+AGG | 0.223900 | 7.3:-17643401 | None:intergenic |
| CTTCACTTATGAGCAATTAA+AGG | 0.226743 | 7.3:+17643836 | MS.gene017881:CDS |
| CTTGTTATCCTTGTAGCTTT+TGG | 0.264232 | 7.3:-17638558 | None:intergenic |
| GTTTGAAACTCTTCTTCTTC+TGG | 0.273544 | 7.3:-17635003 | None:intergenic |
| CTTTGCAGCTGGAAAGTTAC+AGG | 0.277681 | 7.3:+17640786 | MS.gene017881:intron |
| CTTGGCTCTTTCCTGAATAT+TGG | 0.278320 | 7.3:-17635244 | None:intergenic |
| CTTTGCGATCCTTGACCTCT+TGG | 0.284835 | 7.3:-17643460 | None:intergenic |
| GGTGGAATTTCCTCATTAAC+TGG | 0.301844 | 7.3:-17638957 | None:intergenic |
| GTGGTGCTGAGGTGTTTGTC+TGG | 0.302751 | 7.3:+17638379 | MS.gene017881:CDS |
| CTCTTCTGTCTCCTTGGTTT+CGG | 0.307697 | 7.3:-17643724 | None:intergenic |
| GAGCAATTAAAGGCTAAATC+TGG | 0.310091 | 7.3:+17643846 | MS.gene017881:CDS |
| TGGAGCCAATTCCAATATTC+AGG | 0.313397 | 7.3:+17635233 | MS.gene017881:CDS |
| GAAGAGCTTGTTTCTGAAAC+TGG | 0.315747 | 7.3:+17643741 | MS.gene017881:CDS |
| GCTTGAAGGAGGTGGAAAAT+TGG | 0.327549 | 7.3:+17638983 | MS.gene017881:CDS |
| TTCACTTTCTCATTAAATAA+AGG | 0.328967 | 7.3:+17640662 | MS.gene017881:CDS |
| CGCACGCAGAAGTGTTTGTT+TGG | 0.329116 | 7.3:+17640994 | MS.gene017881:CDS |
| ATTTGTTTGATATTCACTTC+TGG | 0.330252 | 7.3:+17634708 | MS.gene017881:CDS |
| TACTTCCTGTGCAGTTGGTT+TGG | 0.336173 | 7.3:+17639213 | MS.gene017881:CDS |
| CTGATTACCTTCTTCCCAAT+GGG | 0.338043 | 7.3:-17635718 | None:intergenic |
| TGGCCTACTCCTTGGAATGC+TGG | 0.347476 | 7.3:-17634159 | None:intergenic |
| AACTTTGATTCTTGGCCATC+AGG | 0.351495 | 7.3:+17638618 | MS.gene017881:CDS |
| TTTCAGGGTCGCATATTTGA+TGG | 0.366605 | 7.3:+17639565 | MS.gene017881:intron |
| CTTGCATTACTATTTGGAAT+TGG | 0.367203 | 7.3:+17641748 | MS.gene017881:CDS |
| TCTTTCCTGAATATTGGAAT+TGG | 0.369492 | 7.3:-17635238 | None:intergenic |
| AGGTGTTTGTCTGGGTTGGC+CGG | 0.379767 | 7.3:+17638388 | MS.gene017881:CDS |
| AAAGCTTCTGCTCTTTGTCT+TGG | 0.386980 | 7.3:-17642835 | None:intergenic |
| TTTCAGGGTGGTGTGAGCTC+TGG | 0.392813 | 7.3:+17639931 | MS.gene017881:intron |
| AGGTGTAACTGCTTTAGTTC+CGG | 0.397537 | 7.3:-17643428 | None:intergenic |
| TTTGATATTCACTTCTGGAT+TGG | 0.398441 | 7.3:+17634713 | MS.gene017881:CDS |
| TCAGGAAAGAGCCAAGGCTT+TGG | 0.414083 | 7.3:+17635251 | MS.gene017881:CDS |
| ACACACTGCAATACCTGAAC+AGG | 0.416762 | 7.3:-17639483 | None:intergenic |
| CCAACCGAGTAGCCATCTTT+TGG | 0.419540 | 7.3:-17639428 | None:intergenic |
| TGTTGCCCTCTTCCAACCTA+TGG | 0.420378 | 7.3:+17639606 | MS.gene017881:CDS |
| GAAATTCCACCTTTGCTTGA+AGG | 0.422960 | 7.3:+17638969 | MS.gene017881:CDS |
| AACAAGCTCTTCTGTCTCCT+TGG | 0.423334 | 7.3:-17643730 | None:intergenic |
| TTTGTAGAGGGACTGACATA+TGG | 0.424024 | 7.3:+17634374 | MS.gene017881:intron |
| CCATGATCAGATTTGGGCAA+TGG | 0.424674 | 7.3:-17634421 | None:intergenic |
| TTAGAAGGCGGTGTTGCATC+TGG | 0.425639 | 7.3:+17634970 | MS.gene017881:CDS |
| GAAGGAAGAGGAAAAGTTGC+AGG | 0.426111 | 7.3:+17638666 | MS.gene017881:CDS |
| AGCATGTCTTGCTTCCATCT+TGG | 0.429395 | 7.3:-17644085 | None:intergenic |
| CCTTCTGTTACTTTATATAG+AGG | 0.429563 | 7.3:-17641206 | None:intergenic |
| GATGCAACACCGCCTTCTAA+TGG | 0.434338 | 7.3:-17634967 | None:intergenic |
| TCTGTTGTGTATGTCTCATC+TGG | 0.435377 | 7.3:-17639985 | None:intergenic |
| AGATTCTTACATCATCTTGC+AGG | 0.435408 | 7.3:+17634459 | MS.gene017881:CDS |
| TGTGATAAAATGCAGGTTCA+AGG | 0.436765 | 7.3:+17641706 | MS.gene017881:intron |
| TCAACTTTCTGGTTTGCTGT+TGG | 0.437448 | 7.3:+17640578 | MS.gene017881:CDS |
| AAGACAAAGAGCAGAAGCTT+TGG | 0.439336 | 7.3:+17642837 | MS.gene017881:CDS |
| TTTGCTGAAGCAACAAGGTA+TGG | 0.441502 | 7.3:+17638908 | MS.gene017881:CDS |
| ACTTTCTGGTTTGCTGTTGG+AGG | 0.444373 | 7.3:+17640581 | MS.gene017881:CDS |
| ATTGAACTTGATGCAGCCCT+TGG | 0.445418 | 7.3:+17634865 | MS.gene017881:CDS |
| ACGAGTTGTCAGAATAAAAC+AGG | 0.445675 | 7.3:+17635050 | MS.gene017881:CDS |
| ACTTGTCAGATTCATGCCCT+TGG | 0.446430 | 7.3:-17634915 | None:intergenic |
| ATCAAGTTGCCATACCGGAC+TGG | 0.448608 | 7.3:-17642902 | None:intergenic |
| TACAATGTCCAACTCACTAA+AGG | 0.448756 | 7.3:+17639455 | MS.gene017881:CDS |
| TTCAGTGAAGACCGTGCAAA+AGG | 0.449952 | 7.3:-17635159 | None:intergenic |
| CCATGTATTATACCATTAGA+AGG | 0.450482 | 7.3:+17634955 | MS.gene017881:CDS |
| CCACCTTTGCTTGAAGGAGG+TGG | 0.452140 | 7.3:+17638975 | MS.gene017881:CDS |
| ACAATGTCCAACTCACTAAA+GGG | 0.455808 | 7.3:+17639456 | MS.gene017881:CDS |
| AGCATACTTTAAAGCAACTC+CGG | 0.457705 | 7.3:-17640537 | None:intergenic |
| GCAGAAGTGTTTGTTTGGAT+TGG | 0.458213 | 7.3:+17640999 | MS.gene017881:CDS |
| AAAGTGCTACCTTCCACAAC+AGG | 0.459870 | 7.3:-17643571 | None:intergenic |
| GGGGACGTGCAGTGCAGTGG+AGG | 0.462141 | 7.3:+17634887 | MS.gene017881:CDS |
| TTGAACTTGATGCAGCCCTT+GGG | 0.463834 | 7.3:+17634866 | MS.gene017881:CDS |
| GTTGTGGAAGGTAGCACTTT+CGG | 0.471041 | 7.3:+17643574 | MS.gene017881:CDS |
| AATTTACCAACATCCTCCTT+AGG | 0.471065 | 7.3:-17639129 | None:intergenic |
| TGCAAGCTGCTGCTGCTCAA+TGG | 0.471105 | 7.3:-17640256 | None:intergenic |
| ACTAAAGGGTAGACCTGTTC+AGG | 0.472162 | 7.3:+17639470 | MS.gene017881:CDS |
| ACTGATTACCTTCTTCCCAA+TGG | 0.472611 | 7.3:-17635719 | None:intergenic |
| TGGTGCTGAGGTGTTTGTCT+GGG | 0.473290 | 7.3:+17638380 | MS.gene017881:CDS |
| TCAAGTTGCCATACCGGACT+GGG | 0.474189 | 7.3:-17642901 | None:intergenic |
| ACATGCAATGTTGCAATTGT+TGG | 0.474745 | 7.3:+17635312 | MS.gene017881:CDS |
| GAGAAGGCTGGATCTCTAGA+TGG | 0.475834 | 7.3:+17641167 | MS.gene017881:CDS |
| GGTGTTTGTCTGGGTTGGCC+GGG | 0.476842 | 7.3:+17638389 | MS.gene017881:CDS |
| ACCGGACTGGGAGATGCCTC+AGG | 0.479838 | 7.3:-17642889 | None:intergenic |
| GCTGCTGCTCAATGGAAGAT+TGG | 0.480547 | 7.3:-17640248 | None:intergenic |
| TCAGATTTGGGCAATGGAAC+TGG | 0.482282 | 7.3:-17634415 | None:intergenic |
| TTTCAGGTATGGATAATCAA+TGG | 0.484318 | 7.3:+17639087 | MS.gene017881:intron |
| AGTTGAGCAGGAATGGTCTC+TGG | 0.485473 | 7.3:-17635757 | None:intergenic |
| GCTTTAAAGTATGCTAAAGA+AGG | 0.485635 | 7.3:+17640545 | MS.gene017881:CDS |
| CCTTCTAATGGTATAATACA+TGG | 0.486449 | 7.3:-17634955 | None:intergenic |
| CATTGCAGATGATGGAAAGT+TGG | 0.487874 | 7.3:+17635645 | MS.gene017881:intron |
| TCCTGAGGCATCTCCCAGTC+CGG | 0.493218 | 7.3:+17642888 | MS.gene017881:CDS |
| GGAAGTTATTCAGTTGTTGA+AGG | 0.493525 | 7.3:+17635272 | MS.gene017881:CDS |
| GCTGAGGTGTTTGTCTGGGT+TGG | 0.493654 | 7.3:+17638384 | MS.gene017881:CDS |
| TCAAGGAGGACACAGGCAAA+GGG | 0.495288 | 7.3:+17643363 | MS.gene017881:CDS |
| CCTGTAAAGTTGAGCAGGAA+TGG | 0.497634 | 7.3:-17635764 | None:intergenic |
| GTTTCTGAAACTGGCAGCAA+TGG | 0.497751 | 7.3:+17643750 | MS.gene017881:CDS |
| CTGAATAACTTCCAAAGCCT+TGG | 0.506351 | 7.3:-17635262 | None:intergenic |
| ACATACCTGTAAAGTTGAGC+AGG | 0.510006 | 7.3:-17635769 | None:intergenic |
| TCTGCATTTAGTTCATCATC+CGG | 0.512169 | 7.3:+17643409 | MS.gene017881:CDS |
| TTTGAAAGTTCACCTTCCAC+TGG | 0.514664 | 7.3:-17638318 | None:intergenic |
| AGGATAACAAGGGTTATTCA+AGG | 0.515332 | 7.3:+17638570 | MS.gene017881:CDS |
| CAGAAATACATAGAGAAGGC+TGG | 0.518835 | 7.3:+17641155 | MS.gene017881:intron |
| AGACATGCTGAAAAGAAAAG+TGG | 0.519596 | 7.3:+17644099 | MS.gene017881:CDS |
| TGCGAAAACTTCATTACCTA+AGG | 0.522289 | 7.3:+17639113 | MS.gene017881:CDS |
| TTGAAGGAAAAGTATCATCA+AGG | 0.523102 | 7.3:+17635288 | MS.gene017881:CDS |
| CCACCTCCTTCAAGCAAAGG+TGG | 0.523532 | 7.3:-17638975 | None:intergenic |
| CTGCGTGCGTATCAAGTATG+AGG | 0.524059 | 7.3:-17640980 | None:intergenic |
| ATGAGAAAGTGAACAAATGC+GGG | 0.524703 | 7.3:-17640652 | None:intergenic |
| TGAACTTTCAAAGTCACTGT+TGG | 0.526540 | 7.3:+17638329 | MS.gene017881:CDS |
| GATTGGAAAGGATACAAGTC+AGG | 0.530039 | 7.3:+17634730 | MS.gene017881:CDS |
| AATACTGCTGGTGCTGAAGA+AGG | 0.531857 | 7.3:+17638648 | MS.gene017881:CDS |
| TCATTACCTAAGGAGGATGT+TGG | 0.532324 | 7.3:+17639123 | MS.gene017881:CDS |
| TCAGGATCTGCTAATACTGC+TGG | 0.532785 | 7.3:+17638636 | MS.gene017881:CDS |
| CAAAAGCTACAAGGATAACA+AGG | 0.533224 | 7.3:+17638559 | MS.gene017881:CDS |
| CCAACCTATGGTGGTCCTCA+AGG | 0.536576 | 7.3:+17639618 | MS.gene017881:CDS |
| AGCAATTAAAGGCTAAATCT+GGG | 0.538067 | 7.3:+17643847 | MS.gene017881:CDS |
| CTTGCCACAGGAGAATTGTC+AGG | 0.538106 | 7.3:-17643541 | None:intergenic |
| TGCCCTCTTCCAACCTATGG+TGG | 0.541469 | 7.3:+17639609 | MS.gene017881:CDS |
| AAATCTGGGAGTGATCTCTC+TGG | 0.541940 | 7.3:+17643861 | MS.gene017881:CDS |
| CCAAAAGATGGCTACTCGGT+TGG | 0.544351 | 7.3:+17639428 | MS.gene017881:CDS |
| TCACGACCTTCTGATTCAGA+AGG | 0.545777 | 7.3:-17643693 | None:intergenic |
| CCTCTATATAAAGTAACAGA+AGG | 0.545897 | 7.3:+17641206 | MS.gene017881:CDS |
| AAGACTACTTCCTGTGCAGT+TGG | 0.546663 | 7.3:+17639208 | MS.gene017881:CDS |
| TTTCCACCTCCTTCAAGCAA+AGG | 0.547299 | 7.3:-17638978 | None:intergenic |
| TGATGGCCAAGAATCAAAGT+TGG | 0.548548 | 7.3:-17638616 | None:intergenic |
| CTGGAGTTGATCTTAAACGC+AGG | 0.549231 | 7.3:+17643880 | MS.gene017881:CDS |
| GTCTAGCGCTACAAAAGTGT+TGG | 0.550538 | 7.3:+17634134 | MS.gene017881:CDS |
| AGGTCTACCCTTTAGTGAGT+TGG | 0.552195 | 7.3:-17639463 | None:intergenic |
| GCAACAAGGTATGGGTGTCA+AGG | 0.552463 | 7.3:+17638917 | MS.gene017881:CDS |
| TGATCATGGAAAATTCTACA+TGG | 0.552785 | 7.3:+17634435 | MS.gene017881:CDS |
| CCATTGCCCAAATCTGATCA+TGG | 0.554241 | 7.3:+17634421 | MS.gene017881:CDS |
| TTTCATTTGCAGACAACACA+AGG | 0.556018 | 7.3:+17634671 | MS.gene017881:intron |
| TGGAAGAGGGCAACAAATTG+TGG | 0.558563 | 7.3:-17639598 | None:intergenic |
| TTTATTGGACTGTGGTGCTG+AGG | 0.559128 | 7.3:+17638368 | MS.gene017881:CDS |
| AGAATCAAAACAAGAAAATG+TGG | 0.560052 | 7.3:+17643779 | MS.gene017881:CDS |
| AAATTGAATAACTTAAATCA+AGG | 0.562509 | 7.3:+17643346 | MS.gene017881:CDS |
| TTGCTGAAGCAACAAGGTAT+GGG | 0.563710 | 7.3:+17638909 | MS.gene017881:CDS |
| TCTCATCAACTTGTGTTACC+CGG | 0.565694 | 7.3:-17638407 | None:intergenic |
| AGGTATGGGTGTCAAGGGAG+CGG | 0.567174 | 7.3:+17638923 | MS.gene017881:CDS |
| ATCAAGGAGGACACAGGCAA+AGG | 0.567992 | 7.3:+17643362 | MS.gene017881:CDS |
| TATTCACTTCTGGATTGGAA+AGG | 0.571615 | 7.3:+17634718 | MS.gene017881:CDS |
| TGGAATTGGTCATTCTGTAG+AGG | 0.571981 | 7.3:+17641762 | MS.gene017881:CDS |
| GGGACGTGCAGTGCAGTGGA+GGG | 0.572315 | 7.3:+17634888 | MS.gene017881:CDS |
| TCAGTGAAGACCGTGCAAAA+GGG | 0.572433 | 7.3:-17635158 | None:intergenic |
| GGACCACCATAGGTTGGAAG+AGG | 0.572587 | 7.3:-17639612 | None:intergenic |
| AATCTAATGGATCAAGTCAA+GGG | 0.572606 | 7.3:+17642806 | MS.gene017881:CDS |
| CCTTGAGGACCACCATAGGT+TGG | 0.575827 | 7.3:-17639618 | None:intergenic |
| TGACCTCTTGGAGATCGCCT+AGG | 0.577044 | 7.3:-17643448 | None:intergenic |
| TGAACTTGATGCAGCCCTTG+GGG | 0.577671 | 7.3:+17634867 | MS.gene017881:CDS |
| TTATCACTCTGGTGAGAGGA+AGG | 0.577702 | 7.3:+17639185 | MS.gene017881:CDS |
| CAACAAGGTATGGGTGTCAA+GGG | 0.578969 | 7.3:+17638918 | MS.gene017881:CDS |
| GCATACTTTAAAGCAACTCC+GGG | 0.579334 | 7.3:-17640536 | None:intergenic |
| TGTTTGGATTGGTCAGTGTG+TGG | 0.580064 | 7.3:+17641010 | MS.gene017881:CDS |
| AAATCTAATGGATCAAGTCA+AGG | 0.583918 | 7.3:+17642805 | MS.gene017881:CDS |
| GCTGGTGCTGAAGAAGGAAG+AGG | 0.589109 | 7.3:+17638654 | MS.gene017881:CDS |
| TGTATTCATCTTAGACACTC+AGG | 0.590728 | 7.3:+17635191 | MS.gene017881:CDS |
| AACAGCAAACCAGAAAGTTG+AGG | 0.591628 | 7.3:-17640576 | None:intergenic |
| AGGCGATCTCCAAGAGGTCA+AGG | 0.594278 | 7.3:+17643451 | MS.gene017881:CDS |
| CAGACAACACAAGGCAAAGG+AGG | 0.596140 | 7.3:+17634680 | MS.gene017881:intron |
| ATTCCACCTTTGCTTGAAGG+AGG | 0.596534 | 7.3:+17638972 | MS.gene017881:CDS |
| GGTGAGGTCAAGCCAGTGGA+AGG | 0.597320 | 7.3:+17638306 | MS.gene017881:CDS |
| AGCAGTAGTCCTGTTGTGGA+AGG | 0.598519 | 7.3:+17643562 | MS.gene017881:CDS |
| ATCAAAACAAGAAAATGTGG+AGG | 0.598601 | 7.3:+17643782 | MS.gene017881:CDS |
| TTGGATACTGAGTCAGACTC+AGG | 0.601523 | 7.3:+17635664 | MS.gene017881:CDS |
| ACACGTTTGTATGTATGCAA+AGG | 0.604224 | 7.3:+17635024 | MS.gene017881:CDS |
| CAATATTCAGGAAAGAGCCA+AGG | 0.604597 | 7.3:+17635245 | MS.gene017881:CDS |
| AGGACCAAAAGATGGCTACT+CGG | 0.605691 | 7.3:+17639424 | MS.gene017881:CDS |
| GTGTTGGAACCAGCATTCCA+AGG | 0.606804 | 7.3:+17634150 | MS.gene017881:CDS |
| CATTCACTAAGTTACCAAGA+TGG | 0.607475 | 7.3:+17644071 | MS.gene017881:CDS |
| ACAGGACTACTGCTTGCCAC+AGG | 0.609771 | 7.3:-17643553 | None:intergenic |
| GATACCTTGAGGACCACCAT+AGG | 0.610363 | 7.3:-17639622 | None:intergenic |
| GTGCAGTGGAGGGAAATCCA+AGG | 0.611979 | 7.3:+17634898 | MS.gene017881:CDS |
| AAACAAGAAAATGTGGAGGG+TGG | 0.612120 | 7.3:+17643786 | MS.gene017881:CDS |
| CTAGCTTTGCTGAAGCAACA+AGG | 0.612532 | 7.3:+17638903 | MS.gene017881:intron |
| GGCAAGCAGTAGTCCTGTTG+TGG | 0.612963 | 7.3:+17643558 | MS.gene017881:CDS |
| CACGACCTTCTGATTCAGAA+GGG | 0.613814 | 7.3:-17643692 | None:intergenic |
| GTGTTGTACACTTATCACTC+TGG | 0.614335 | 7.3:+17639174 | MS.gene017881:CDS |
| ATCTAATGGATCAAGTCAAG+GGG | 0.614748 | 7.3:+17642807 | MS.gene017881:CDS |
| TGGAGTTGATCTTAAACGCA+GGG | 0.614819 | 7.3:+17643881 | MS.gene017881:CDS |
| GCAGTATTAGCAGATCCTGA+TGG | 0.618214 | 7.3:-17638633 | None:intergenic |
| AGTAAGAACATTAGAAAGAG+CGG | 0.619492 | 7.3:-17643497 | None:intergenic |
| AATGAGAAAGTGAACAAATG+CGG | 0.626137 | 7.3:-17640653 | None:intergenic |
| GATCATGGAAAATTCTACAT+GGG | 0.626759 | 7.3:+17634436 | MS.gene017881:CDS |
| TGCATTCAATTCATCTCCTG+AGG | 0.627352 | 7.3:+17642873 | MS.gene017881:CDS |
| TGCAGTGGAGGGAAATCCAA+GGG | 0.629828 | 7.3:+17634899 | MS.gene017881:CDS |
| GAACTTGATGCAGCCCTTGG+GGG | 0.630157 | 7.3:+17634868 | MS.gene017881:CDS |
| GAACCAGCATTCCAAGGAGT+AGG | 0.632356 | 7.3:+17634156 | MS.gene017881:CDS |
| TGAAGGAAAAGTATCATCAA+GGG | 0.632365 | 7.3:+17635289 | MS.gene017881:CDS |
| GAAAACTTCATTACCTAAGG+AGG | 0.633558 | 7.3:+17639116 | MS.gene017881:CDS |
| AGTGTCCCTTCTGAATCAGA+AGG | 0.636758 | 7.3:+17643687 | MS.gene017881:CDS |
| TCAAAACAAGAAAATGTGGA+GGG | 0.639352 | 7.3:+17643783 | MS.gene017881:CDS |
| ACTTAAATCAAGGAGGACAC+AGG | 0.640179 | 7.3:+17643356 | MS.gene017881:CDS |
| CTCTATATAAAGTAACAGAA+GGG | 0.641376 | 7.3:+17641207 | MS.gene017881:CDS |
| ACTTTATATAGAGGTACATG+AGG | 0.641936 | 7.3:-17641197 | None:intergenic |
| GTAGAGGGACTGACATATGG+AGG | 0.646473 | 7.3:+17634377 | MS.gene017881:intron |
| ACACTTATCACTCTGGTGAG+AGG | 0.648428 | 7.3:+17639181 | MS.gene017881:CDS |
| AGCAGCATGTACCACTGCTG+AGG | 0.650561 | 7.3:+17638434 | MS.gene017881:CDS |
| TGAAGGAGGTGGAAAATTGG+AGG | 0.653497 | 7.3:+17638986 | MS.gene017881:CDS |
| GACCACCATAGGTTGGAAGA+GGG | 0.653871 | 7.3:-17639611 | None:intergenic |
| ATCACCTGACAATTCTCCTG+TGG | 0.658751 | 7.3:+17643537 | MS.gene017881:CDS |
| TGAAGAAGTTACCGAAACCA+AGG | 0.659423 | 7.3:+17643713 | MS.gene017881:CDS |
| GAACTAAAGCAGTTACACCT+AGG | 0.659483 | 7.3:+17643431 | MS.gene017881:CDS |
| TTGAATAACTTAAATCAAGG+AGG | 0.661257 | 7.3:+17643349 | MS.gene017881:CDS |
| GGGTAACACAAGTTGATGAG+AGG | 0.661447 | 7.3:+17638409 | MS.gene017881:CDS |
| TTGCAGACAACACAAGGCAA+AGG | 0.667009 | 7.3:+17634677 | MS.gene017881:intron |
| TGATTACCTTCTTCCCAATG+GGG | 0.667314 | 7.3:-17635717 | None:intergenic |
| TTGCAGTATTGCAGATGGTG+AGG | 0.673987 | 7.3:+17638290 | MS.gene017881:intron |
| ATATGGAATTACCTCAGCAG+TGG | 0.676703 | 7.3:-17638445 | None:intergenic |
| AAATGCTATTTATTGGACTG+TGG | 0.679201 | 7.3:+17638360 | MS.gene017881:CDS |
| TGTGGTTGCAGTATTGCAGA+TGG | 0.683073 | 7.3:+17638285 | MS.gene017881:intron |
| GATTACCTTCTTCCCAATGG+GGG | 0.690181 | 7.3:-17635716 | None:intergenic |
| AGATGGTGAGGTCAAGCCAG+TGG | 0.691823 | 7.3:+17638302 | MS.gene017881:CDS |
| AGATTGCAGAAGAAAACACT+CGG | 0.695852 | 7.3:-17640196 | None:intergenic |
| AGTTGATCTTAAACGCAGGG+AGG | 0.700383 | 7.3:+17643884 | MS.gene017881:CDS |
| ACACCTAGGCGATCTCCAAG+AGG | 0.711189 | 7.3:+17643445 | MS.gene017881:CDS |
| TCTAATGGATCAAGTCAAGG+GGG | 0.716226 | 7.3:+17642808 | MS.gene017881:CDS |
| AAAAGCTACAAGGATAACAA+GGG | 0.718147 | 7.3:+17638560 | MS.gene017881:CDS |
| TGTATTATACCATTAGAAGG+CGG | 0.738033 | 7.3:+17634958 | MS.gene017881:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 17634117 | 17644132 | 17634117 | ID=MS.gene017881 |
| chr7.3 | mRNA | 17634117 | 17644132 | 17634117 | ID=MS.gene017881.t1;Parent=MS.gene017881 |
| chr7.3 | exon | 17634117 | 17634187 | 17634117 | ID=MS.gene017881.t1.exon1;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17634117 | 17634187 | 17634117 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17634381 | 17634480 | 17634381 | ID=MS.gene017881.t1.exon2;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17634381 | 17634480 | 17634381 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17634683 | 17634751 | 17634683 | ID=MS.gene017881.t1.exon3;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17634683 | 17634751 | 17634683 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17634835 | 17635071 | 17634835 | ID=MS.gene017881.t1.exon4;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17634835 | 17635071 | 17634835 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17635156 | 17635333 | 17635156 | ID=MS.gene017881.t1.exon5;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17635156 | 17635333 | 17635156 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17635653 | 17635785 | 17635653 | ID=MS.gene017881.t1.exon6;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17635653 | 17635785 | 17635653 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17638296 | 17638455 | 17638296 | ID=MS.gene017881.t1.exon7;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17638296 | 17638455 | 17638296 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17638534 | 17638687 | 17638534 | ID=MS.gene017881.t1.exon8;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17638534 | 17638687 | 17638534 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17638907 | 17639007 | 17638907 | ID=MS.gene017881.t1.exon9;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17638907 | 17639007 | 17638907 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17639093 | 17639251 | 17639093 | ID=MS.gene017881.t1.exon10;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17639093 | 17639251 | 17639093 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17639423 | 17639491 | 17639423 | ID=MS.gene017881.t1.exon11;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17639423 | 17639491 | 17639423 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17639571 | 17639639 | 17639571 | ID=MS.gene017881.t1.exon12;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17639571 | 17639639 | 17639571 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17639937 | 17640074 | 17639937 | ID=MS.gene017881.t1.exon13;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17639937 | 17640074 | 17639937 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17640174 | 17640302 | 17640174 | ID=MS.gene017881.t1.exon14;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17640174 | 17640302 | 17640174 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17640536 | 17640683 | 17640536 | ID=MS.gene017881.t1.exon15;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17640536 | 17640683 | 17640536 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17640794 | 17640807 | 17640794 | ID=MS.gene017881.t1.exon16;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17640794 | 17640807 | 17640794 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17640930 | 17641070 | 17640930 | ID=MS.gene017881.t1.exon17;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17640930 | 17641070 | 17640930 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17641158 | 17641283 | 17641158 | ID=MS.gene017881.t1.exon18;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17641158 | 17641283 | 17641158 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17641721 | 17641783 | 17641721 | ID=MS.gene017881.t1.exon19;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17641721 | 17641783 | 17641721 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17642802 | 17642909 | 17642802 | ID=MS.gene017881.t1.exon20;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17642802 | 17642909 | 17642802 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17643343 | 17643595 | 17643343 | ID=MS.gene017881.t1.exon21;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17643343 | 17643595 | 17643343 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17643673 | 17643905 | 17643673 | ID=MS.gene017881.t1.exon22;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17643673 | 17643905 | 17643673 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| chr7.3 | exon | 17644019 | 17644132 | 17644019 | ID=MS.gene017881.t1.exon23;Parent=MS.gene017881.t1 |
| chr7.3 | CDS | 17644019 | 17644132 | 17644019 | ID=cds.MS.gene017881.t1;Parent=MS.gene017881.t1 |
| Gene Sequence |
| Protein sequence |