Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021778.t1 | XP_003621296.1 | 71.8 | 546 | 154 | 0 | 1 | 546 | 1 | 546 | 2.30E-220 | 775 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021778.t1 | Q8RY59 | 36.1 | 576 | 317 | 10 | 1 | 532 | 1 | 569 | 6.6e-83 | 309.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021778.t1 | A2Q3R6 | 71.8 | 546 | 154 | 0 | 1 | 546 | 1 | 546 | 1.7e-220 | 775.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene36039 | MS.gene021778 | PPI |
| MS.gene070678 | MS.gene021778 | PPI |
| MS.gene046409 | MS.gene021778 | PPI |
| MS.gene065039 | MS.gene021778 | PPI |
| MS.gene070621 | MS.gene021778 | PPI |
| MS.gene79552 | MS.gene021778 | PPI |
| MS.gene021778 | MS.gene069103 | PPI |
| MS.gene021778 | MS.gene027783 | PPI |
| MS.gene34237 | MS.gene021778 | PPI |
| MS.gene76207 | MS.gene021778 | PPI |
| MS.gene007901 | MS.gene021778 | PPI |
| MS.gene74956 | MS.gene021778 | PPI |
| MS.gene021778 | MS.gene029308 | PPI |
| MS.gene057563 | MS.gene021778 | PPI |
| MS.gene032270 | MS.gene021778 | PPI |
| MS.gene021778 | MS.gene001066 | PPI |
| MS.gene021778 | MS.gene046455 | PPI |
| MS.gene046444 | MS.gene021778 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021778.t1 | MTR_7g011550 | 71.795 | 546 | 154 | 0 | 1 | 546 | 1 | 546 | 0.0 | 798 |
| MS.gene021778.t1 | MTR_1g112330 | 45.694 | 569 | 270 | 6 | 1 | 533 | 1 | 566 | 5.89e-161 | 470 |
| MS.gene021778.t1 | MTR_1g112330 | 45.583 | 566 | 272 | 6 | 1 | 533 | 1 | 563 | 9.29e-160 | 467 |
| MS.gene021778.t1 | MTR_5g032190 | 44.190 | 568 | 278 | 8 | 1 | 535 | 1 | 562 | 9.82e-154 | 452 |
| MS.gene021778.t1 | MTR_1g112330 | 50.437 | 458 | 199 | 5 | 1 | 433 | 1 | 455 | 8.81e-145 | 425 |
| MS.gene021778.t1 | MTR_5g032190 | 48.678 | 454 | 206 | 6 | 1 | 433 | 1 | 448 | 7.79e-138 | 408 |
| MS.gene021778.t1 | MTR_5g032190 | 48.678 | 454 | 206 | 6 | 1 | 433 | 1 | 448 | 1.32e-137 | 408 |
| MS.gene021778.t1 | MTR_5g029580 | 54.648 | 355 | 147 | 4 | 183 | 533 | 5 | 349 | 4.66e-117 | 350 |
| MS.gene021778.t1 | MTR_7g011640 | 58.824 | 170 | 18 | 3 | 42 | 211 | 1 | 118 | 6.64e-53 | 177 |
| MS.gene021778.t1 | MTR_7g011880 | 55.629 | 151 | 40 | 3 | 358 | 505 | 60 | 186 | 8.30e-42 | 149 |
| MS.gene021778.t1 | MTR_2g090130 | 48.667 | 150 | 42 | 1 | 254 | 403 | 103 | 217 | 2.71e-38 | 140 |
| MS.gene021778.t1 | MTR_2g090130 | 44.737 | 152 | 37 | 2 | 1 | 152 | 1 | 105 | 1.81e-30 | 119 |
| MS.gene021778.t1 | MTR_3g077870 | 29.297 | 256 | 146 | 5 | 283 | 536 | 94 | 316 | 3.24e-31 | 124 |
| MS.gene021778.t1 | MTR_4g105740 | 29.066 | 289 | 171 | 7 | 249 | 533 | 46 | 304 | 2.49e-30 | 121 |
| MS.gene021778.t1 | MTR_4g105740 | 29.167 | 288 | 170 | 7 | 249 | 532 | 46 | 303 | 3.36e-30 | 120 |
| MS.gene021778.t1 | MTR_7g061730 | 90.000 | 50 | 5 | 0 | 483 | 532 | 1 | 50 | 1.39e-23 | 95.5 |
| MS.gene021778.t1 | MTR_7g061850 | 50.943 | 106 | 49 | 1 | 205 | 310 | 21 | 123 | 1.77e-23 | 96.3 |
| MS.gene021778.t1 | MTR_8g088250 | 28.807 | 243 | 144 | 5 | 286 | 526 | 64 | 279 | 6.46e-23 | 99.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021778.t1 | AT1G32230 | 37.153 | 576 | 310 | 14 | 1 | 532 | 1 | 568 | 2.45e-103 | 322 |
| MS.gene021778.t1 | AT1G32230 | 37.153 | 576 | 310 | 14 | 1 | 532 | 1 | 568 | 3.76e-103 | 322 |
| MS.gene021778.t1 | AT1G32230 | 37.153 | 576 | 310 | 14 | 1 | 532 | 1 | 568 | 3.76e-103 | 322 |
| MS.gene021778.t1 | AT1G32230 | 37.153 | 576 | 310 | 14 | 1 | 532 | 1 | 568 | 3.76e-103 | 322 |
| MS.gene021778.t1 | AT1G32230 | 37.153 | 576 | 310 | 14 | 1 | 532 | 1 | 568 | 3.76e-103 | 322 |
| MS.gene021778.t1 | AT1G32230 | 37.088 | 577 | 310 | 14 | 1 | 532 | 1 | 569 | 5.32e-103 | 322 |
| MS.gene021778.t1 | AT2G35510 | 35.221 | 565 | 309 | 12 | 1 | 520 | 1 | 553 | 6.40e-94 | 298 |
| MS.gene021778.t1 | AT2G35510 | 35.221 | 565 | 309 | 12 | 1 | 520 | 1 | 553 | 6.40e-94 | 298 |
| MS.gene021778.t1 | AT2G35510 | 38.411 | 453 | 242 | 9 | 1 | 426 | 1 | 443 | 1.70e-88 | 280 |
| MS.gene021778.t1 | AT1G23550 | 29.537 | 281 | 164 | 5 | 261 | 532 | 63 | 318 | 1.63e-35 | 135 |
| MS.gene021778.t1 | AT1G70440 | 31.489 | 235 | 128 | 3 | 301 | 532 | 101 | 305 | 9.40e-33 | 127 |
| MS.gene021778.t1 | AT1G70440 | 31.489 | 235 | 128 | 3 | 301 | 532 | 101 | 305 | 9.40e-33 | 127 |
| MS.gene021778.t1 | AT5G62520 | 28.854 | 253 | 142 | 5 | 275 | 522 | 77 | 296 | 2.84e-31 | 124 |
| MS.gene021778.t1 | AT5G62520 | 35.669 | 157 | 97 | 3 | 275 | 429 | 77 | 231 | 7.56e-26 | 106 |
| MS.gene021778.t1 | AT3G47720 | 29.787 | 235 | 125 | 6 | 298 | 532 | 117 | 311 | 4.75e-23 | 100 |
Find 128 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATGCTCATTTATATTAT+TGG | 0.110481 | 7.1:-84174083 | None:intergenic |
| CATCTATCTATCAAAATAAA+TGG | 0.152205 | 7.1:+84174151 | MS.gene021778:CDS |
| TCCAGAGGATGTTGTTAATT+TGG | 0.164391 | 7.1:+84173874 | MS.gene021778:CDS |
| GTAGAACCAGCAAAATCTTT+AGG | 0.191057 | 7.1:-84174052 | None:intergenic |
| TAAATCTTTATATGGAAAAT+TGG | 0.200932 | 7.1:+84174330 | MS.gene021778:CDS |
| TCATGTTATTACTAACAAAA+TGG | 0.229358 | 7.1:+84174246 | MS.gene021778:CDS |
| GATTATACTAAATCTTTATA+TGG | 0.247940 | 7.1:+84174322 | MS.gene021778:CDS |
| TTGTGATATCAGCTTGCTTT+TGG | 0.252956 | 7.1:-84174474 | None:intergenic |
| TCATGCTCATTTATATTATT+GGG | 0.265278 | 7.1:-84174082 | None:intergenic |
| TCATACAGGAATGAATTCTT+TGG | 0.271641 | 7.1:+84174378 | MS.gene021778:CDS |
| GAAGATAGAAGCACTGAAAA+AGG | 0.288961 | 7.1:-84176061 | None:intergenic |
| TCTAAACAAATGAGGATTCT+TGG | 0.292737 | 7.1:+84173722 | MS.gene021778:CDS |
| TCTCCATCCAAATGCATATA+TGG | 0.299169 | 7.1:+84174598 | MS.gene021778:CDS |
| TTGAAGCTAACAACAAATTC+TGG | 0.313238 | 7.1:-84175048 | None:intergenic |
| ATGATAACTAACCAGACATT+AGG | 0.326049 | 7.1:-84174652 | None:intergenic |
| TTGTCAACAATGGTGGAATA+TGG | 0.337324 | 7.1:+84174556 | MS.gene021778:CDS |
| GGTCCTATGTCGTGTCATAA+TGG | 0.345844 | 7.1:+84174891 | MS.gene021778:CDS |
| ATCTATCTATCAAAATAAAT+GGG | 0.348429 | 7.1:+84174152 | MS.gene021778:CDS |
| TTCCAAAGTACTATGTGGTT+TGG | 0.351175 | 7.1:+84174998 | MS.gene021778:CDS |
| AGCAGCTGCGAATATGATAA+TGG | 0.353915 | 7.1:+84174958 | MS.gene021778:CDS |
| TCACATTATTGTGATGTTGA+TGG | 0.354266 | 7.1:+84174850 | MS.gene021778:CDS |
| TAGAACCAGCAAAATCTTTA+GGG | 0.360027 | 7.1:-84174051 | None:intergenic |
| AAGTCCCCTTTGGTGTTTGA+AGG | 0.364527 | 7.1:+84175069 | MS.gene021778:CDS |
| TGATATCACAAAAGGAGTTC+GGG | 0.366922 | 7.1:+84174486 | MS.gene021778:CDS |
| CATACAGGAATGAATTCTTT+GGG | 0.374714 | 7.1:+84174379 | MS.gene021778:CDS |
| GCAGCTGCGAATATGATAAT+GGG | 0.405136 | 7.1:+84174959 | MS.gene021778:CDS |
| AACTCCATCCAATGCCTTTG+AGG | 0.406411 | 7.1:-84173621 | None:intergenic |
| TCCTGGTATTTCCAAGTCAT+TGG | 0.407810 | 7.1:+84173772 | MS.gene021778:CDS |
| GGGAGGAGGAAATGTTGATA+TGG | 0.407828 | 7.1:+84174267 | MS.gene021778:CDS |
| TGTTTAGAAACCGCACTTGT+TGG | 0.413660 | 7.1:-84173707 | None:intergenic |
| ACACAAAAGTTGTTTCATAC+AGG | 0.418718 | 7.1:+84174364 | MS.gene021778:CDS |
| CTGATATCACAAAAGGAGTT+CGG | 0.421659 | 7.1:+84174485 | MS.gene021778:CDS |
| GTCCTATGTCGTGTCATAAT+GGG | 0.424961 | 7.1:+84174892 | MS.gene021778:CDS |
| TCCAAATGCATATATGGCTT+TGG | 0.427315 | 7.1:+84174604 | MS.gene021778:CDS |
| TGTTAGCTTCAAGTCCCCTT+TGG | 0.433312 | 7.1:+84175059 | MS.gene021778:CDS |
| TGTTCTACAACAACGGTGAA+TGG | 0.435101 | 7.1:+84173843 | MS.gene021778:CDS |
| GCTATAGAGGTAGAGTTAGA+TGG | 0.435277 | 7.1:+84173926 | MS.gene021778:CDS |
| GCCAAAGCCATATATGCATT+TGG | 0.435315 | 7.1:-84174605 | None:intergenic |
| GGAGTACTTGTCATGTTAGT+AGG | 0.436585 | 7.1:-84176022 | None:intergenic |
| AAAGGCATCCTAGGGGAACT+TGG | 0.437363 | 7.1:-84176043 | None:intergenic |
| CGTCCAGTATGCATTGTTGA+TGG | 0.442291 | 7.1:+84176126 | MS.gene021778:CDS |
| TGATAACTAACCAGACATTA+GGG | 0.444964 | 7.1:-84174651 | None:intergenic |
| GTTTACAACAACCTATTGCT+TGG | 0.450662 | 7.1:+84174002 | MS.gene021778:CDS |
| CATGTTATTACTAACAAAAT+GGG | 0.451731 | 7.1:+84174247 | MS.gene021778:CDS |
| ACTCCATCCAATGCCTTTGA+GGG | 0.456091 | 7.1:-84173620 | None:intergenic |
| TTCCAAACCACATAGTACTT+TGG | 0.458660 | 7.1:-84175000 | None:intergenic |
| ACCAAATTAACAACATCCTC+TGG | 0.460884 | 7.1:-84173875 | None:intergenic |
| TATTTGAACTATAAGAAAAG+TGG | 0.460993 | 7.1:+84173803 | MS.gene021778:CDS |
| AATTAACAAGGAAGCTATAG+AGG | 0.472038 | 7.1:+84173913 | MS.gene021778:CDS |
| TTATCATATTCGCAGCTGCT+TGG | 0.478948 | 7.1:-84174955 | None:intergenic |
| TTTATATGGAAAATTGGATG+TGG | 0.481653 | 7.1:+84174336 | MS.gene021778:CDS |
| ACGTCGATAAGAAACATAGT+AGG | 0.481743 | 7.1:-84176106 | None:intergenic |
| TCCTCGTCAATCCAAGCAAT+AGG | 0.483059 | 7.1:-84174013 | None:intergenic |
| ATACCATCAACAATGCATAC+TGG | 0.492665 | 7.1:-84176129 | None:intergenic |
| TATCACCTTCAAACACCAAA+GGG | 0.493086 | 7.1:-84175074 | None:intergenic |
| AACATGGAGCTTCTTCATCC+TGG | 0.494545 | 7.1:+84174916 | MS.gene021778:CDS |
| TGGGGCAGATGAATCAAAGT+TGG | 0.498331 | 7.1:+84174171 | MS.gene021778:CDS |
| AACAATGGTGGAATATGGAC+CGG | 0.504689 | 7.1:+84174561 | MS.gene021778:CDS |
| GTCGAGAGTTATAGCAACTC+AGG | 0.505881 | 7.1:+84174421 | MS.gene021778:CDS |
| GTGGCTTGCTTGTTCTAAAG+AGG | 0.508430 | 7.1:+84174531 | MS.gene021778:CDS |
| CTGTTACCCACCCTAATGTC+TGG | 0.509772 | 7.1:+84174641 | MS.gene021778:CDS |
| AAGCAAGCTGATATCACAAA+AGG | 0.510309 | 7.1:+84174478 | MS.gene021778:CDS |
| ATTTGAACTATAAGAAAAGT+GGG | 0.514811 | 7.1:+84173804 | MS.gene021778:CDS |
| TCGAAGTTGAGGTCAATTGT+TGG | 0.516677 | 7.1:+84176257 | MS.gene021778:CDS |
| AATTGTTGGAAATAATGTAA+TGG | 0.521426 | 7.1:+84176271 | MS.gene021778:CDS |
| ATACCAGGATCAGAGTCATC+TGG | 0.521463 | 7.1:-84173758 | None:intergenic |
| TCATTTGACCCACCACTTGG+TGG | 0.531935 | 7.1:-84176529 | None:intergenic |
| TGGAAACGGAATCAAGCATA+TGG | 0.532440 | 7.1:+84174870 | MS.gene021778:CDS |
| TATTGTGATGTTGATGGAAA+CGG | 0.533621 | 7.1:+84174856 | MS.gene021778:CDS |
| AGTCAGATGTGTAACACATT+GGG | 0.534919 | 7.1:-84173672 | None:intergenic |
| GTGCGGTTTCTAAACAAATG+AGG | 0.538378 | 7.1:+84173714 | MS.gene021778:CDS |
| TATTTAATGTTCTACAACAA+CGG | 0.539329 | 7.1:+84173836 | MS.gene021778:CDS |
| CACTAAATCAAAAGCGCAAG+AGG | 0.540037 | 7.1:+84173645 | MS.gene021778:CDS |
| ATAATACTTGACCAATGACT+TGG | 0.540326 | 7.1:-84173783 | None:intergenic |
| CGTCGATAAGAAACATAGTA+GGG | 0.541703 | 7.1:-84176105 | None:intergenic |
| TTGCTTGGATTGACGAGGAA+GGG | 0.541770 | 7.1:+84174017 | MS.gene021778:CDS |
| GAGTCATTTGACCCACCACT+TGG | 0.544865 | 7.1:-84176532 | None:intergenic |
| GGGGCAGATGAATCAAAGTT+GGG | 0.547456 | 7.1:+84174172 | MS.gene021778:CDS |
| AAACCAGATGACTCTGATCC+TGG | 0.548440 | 7.1:+84173755 | MS.gene021778:CDS |
| AATATATAATATTCAATCAA+AGG | 0.553393 | 7.1:+84176301 | MS.gene021778:CDS |
| TCAATTTCCAAAGTACTATG+TGG | 0.557946 | 7.1:+84174993 | MS.gene021778:CDS |
| TTATATGGAAAATTGGATGT+GGG | 0.558440 | 7.1:+84174337 | MS.gene021778:CDS |
| CAGTCAGATGTGTAACACAT+TGG | 0.569180 | 7.1:-84173673 | None:intergenic |
| AAGCCATATATGCATTTGGA+TGG | 0.569886 | 7.1:-84174601 | None:intergenic |
| AAACCCTCAAAGGCATTGGA+TGG | 0.570520 | 7.1:+84173617 | MS.gene021778:CDS |
| CAATGTGTTACACATCTGAC+TGG | 0.573685 | 7.1:+84173674 | MS.gene021778:CDS |
| TAAAGAGGATTTGTCAACAA+TGG | 0.574734 | 7.1:+84174546 | MS.gene021778:CDS |
| AGAGGATTTGTCAACAATGG+TGG | 0.581300 | 7.1:+84174549 | MS.gene021778:CDS |
| ATTGCTTGGATTGACGAGGA+AGG | 0.581526 | 7.1:+84174016 | MS.gene021778:CDS |
| ACGCCAATGTTCGTTATGCG+TGG | 0.588075 | 7.1:+84174512 | MS.gene021778:CDS |
| CAATAATATAAATGAGCATG+AGG | 0.588525 | 7.1:+84174084 | MS.gene021778:CDS |
| TTGCAGAGACCACCAAGTGG+TGG | 0.592304 | 7.1:+84176520 | MS.gene021778:intron |
| ACCAATGACTTGGAAATACC+AGG | 0.593841 | 7.1:-84173773 | None:intergenic |
| ACAATGGTGGAATATGGACC+GGG | 0.595516 | 7.1:+84174562 | MS.gene021778:CDS |
| ATTACTAACAAAATGGGAGG+AGG | 0.596613 | 7.1:+84174253 | MS.gene021778:CDS |
| AGACTATCTGCATTCTACAA+TGG | 0.596665 | 7.1:+84175760 | MS.gene021778:CDS |
| ATGATTTCGTGTCGAAGTTG+AGG | 0.602531 | 7.1:+84176246 | MS.gene021778:CDS |
| TCGTGTCATAATGGGAAACA+TGG | 0.607717 | 7.1:+84174900 | MS.gene021778:CDS |
| CAAGTACTCCAAGTTCCCCT+AGG | 0.612672 | 7.1:+84176035 | MS.gene021778:CDS |
| ATAAGAAACATAGTAGGGGA+AGG | 0.613362 | 7.1:-84176100 | None:intergenic |
| TTCCCATTATGACACGACAT+AGG | 0.617580 | 7.1:-84174894 | None:intergenic |
| AAGCCACGCATAACGAACAT+TGG | 0.620562 | 7.1:-84174515 | None:intergenic |
| ATATCACCTTCAAACACCAA+AGG | 0.621661 | 7.1:-84175075 | None:intergenic |
| TGCAGAGACCACCAAGTGGT+GGG | 0.622851 | 7.1:+84176521 | MS.gene021778:intron |
| TCTATCTTCTATAAGAAACA+TGG | 0.622880 | 7.1:+84176075 | MS.gene021778:CDS |
| GAAAGATTTCAAAATTAACA+AGG | 0.632912 | 7.1:+84173901 | MS.gene021778:CDS |
| AACTAACCAGACATTAGGGT+GGG | 0.635937 | 7.1:-84174647 | None:intergenic |
| TCTATCTATCAAAATAAATG+GGG | 0.640066 | 7.1:+84174153 | MS.gene021778:CDS |
| AGAGTTATAGCAACTCAGGA+AGG | 0.643988 | 7.1:+84174425 | MS.gene021778:CDS |
| GTTATTACTAACAAAATGGG+AGG | 0.647815 | 7.1:+84174250 | MS.gene021778:CDS |
| AATAATATAAATGAGCATGA+GGG | 0.652900 | 7.1:+84174085 | MS.gene021778:CDS |
| ACTAAATCAAAAGCGCAAGA+GGG | 0.652953 | 7.1:+84173646 | MS.gene021778:CDS |
| AAGTTGGGAGAGTATAGTCG+AGG | 0.657753 | 7.1:+84174187 | MS.gene021778:CDS |
| ACCTATTGCTTGGATTGACG+AGG | 0.659220 | 7.1:+84174012 | MS.gene021778:CDS |
| GATATCACAAAAGGAGTTCG+GGG | 0.662559 | 7.1:+84174487 | MS.gene021778:CDS |
| CAGCTGCGAATATGATAATG+GGG | 0.668194 | 7.1:+84174960 | MS.gene021778:CDS |
| AGTTTCAGAACCAACAAGTG+CGG | 0.669836 | 7.1:+84173697 | MS.gene021778:CDS |
| TGTCATGTTAGTAGGCACAC+TGG | 0.673897 | 7.1:-84176014 | None:intergenic |
| ATATCACAAAAGGAGTTCGG+GGG | 0.675411 | 7.1:+84174488 | MS.gene021778:CDS |
| GTCGATAAGAAACATAGTAG+GGG | 0.676235 | 7.1:-84176104 | None:intergenic |
| AGTTGGGAGAGTATAGTCGA+GGG | 0.679494 | 7.1:+84174188 | MS.gene021778:CDS |
| GGAGATAGTTCATAGTTACC+CGG | 0.684160 | 7.1:-84174580 | None:intergenic |
| CTGCGAATATGATAATGGGG+TGG | 0.696616 | 7.1:+84174963 | MS.gene021778:CDS |
| ATCACCTTCAAACACCAAAG+GGG | 0.702949 | 7.1:-84175073 | None:intergenic |
| TAACTAACCAGACATTAGGG+TGG | 0.706033 | 7.1:-84174648 | None:intergenic |
| TATCACAAAAGGAGTTCGGG+GGG | 0.714739 | 7.1:+84174489 | MS.gene021778:CDS |
| TGAATGGTTGAACTATCCAG+AGG | 0.724152 | 7.1:+84173859 | MS.gene021778:CDS |
| TTCTTGCAGAGACCACCAAG+TGG | 0.740785 | 7.1:+84176517 | MS.gene021778:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATAATATTCAATCAA+AGG | + | chr7.1:84176301-84176320 | MS.gene021778:CDS | 10.0% |
| !! | ATCTATCTATCAAAATAAAT+GGG | + | chr7.1:84174152-84174171 | MS.gene021778:CDS | 15.0% |
| !! | ATTTCTTTCAACAAAAAAAA+AGG | + | chr7.1:84175319-84175338 | MS.gene021778:intron | 15.0% |
| !! | GATTATACTAAATCTTTATA+TGG | + | chr7.1:84174322-84174341 | MS.gene021778:CDS | 15.0% |
| !! | GTTATTATAAATTATTGTGT+TGG | + | chr7.1:84174791-84174810 | MS.gene021778:intron | 15.0% |
| !! | TAAATCTTTATATGGAAAAT+TGG | + | chr7.1:84174330-84174349 | MS.gene021778:CDS | 15.0% |
| !!! | ATTTTTACTATTTAAGACAT+AGG | - | chr7.1:84176176-84176195 | None:intergenic | 15.0% |
| !!! | TTTTGTAGTTTTATTTCTTA+GGG | + | chr7.1:84175607-84175626 | MS.gene021778:intron | 15.0% |
| !!! | TTTTTGTAAGAAGTTTAATT+TGG | + | chr7.1:84176341-84176360 | MS.gene021778:intron | 15.0% |
| !! | AAAAATAAAGAAATAACACG+TGG | + | chr7.1:84175494-84175513 | MS.gene021778:intron | 20.0% |
| !! | AATAATATAAATGAGCATGA+GGG | + | chr7.1:84174085-84174104 | MS.gene021778:CDS | 20.0% |
| !! | AATTGTTGGAAATAATGTAA+TGG | + | chr7.1:84176271-84176290 | MS.gene021778:CDS | 20.0% |
| !! | ACATGGAAATAAATTTCTAA+AGG | - | chr7.1:84175107-84175126 | None:intergenic | 20.0% |
| !! | ATTTGAACTATAAGAAAAGT+GGG | + | chr7.1:84173804-84173823 | MS.gene021778:CDS | 20.0% |
| !! | CAAAAAAAATGTTTGGATAA+AGG | - | chr7.1:84175969-84175988 | None:intergenic | 20.0% |
| !! | CATCTATCTATCAAAATAAA+TGG | + | chr7.1:84174151-84174170 | MS.gene021778:CDS | 20.0% |
| !! | CATGTTATTACTAACAAAAT+GGG | + | chr7.1:84174247-84174266 | MS.gene021778:CDS | 20.0% |
| !! | GAAAGATTTCAAAATTAACA+AGG | + | chr7.1:84173901-84173920 | MS.gene021778:CDS | 20.0% |
| !! | TATTTAATGTTCTACAACAA+CGG | + | chr7.1:84173836-84173855 | MS.gene021778:CDS | 20.0% |
| !! | TATTTGAACTATAAGAAAAG+TGG | + | chr7.1:84173803-84173822 | MS.gene021778:CDS | 20.0% |
| !! | TCATGCTCATTTATATTATT+GGG | - | chr7.1:84174085-84174104 | None:intergenic | 20.0% |
| !! | TCATGTTATTACTAACAAAA+TGG | + | chr7.1:84174246-84174265 | MS.gene021778:CDS | 20.0% |
| !! | TCTATCTATCAAAATAAATG+GGG | + | chr7.1:84174153-84174172 | MS.gene021778:CDS | 20.0% |
| !!! | ACATTCATGTGAAATATTTT+GGG | + | chr7.1:84175898-84175917 | MS.gene021778:intron | 20.0% |
| !!! | GATGTTTTTTGTTTTTTTAC+AGG | + | chr7.1:84175707-84175726 | MS.gene021778:intron | 20.0% |
| !!! | GGTTTTGTAGTTTTTTTTAT+GGG | - | chr7.1:84175395-84175414 | None:intergenic | 20.0% |
| !!! | GTAATAAAGCAAAACATTTT+AGG | - | chr7.1:84175947-84175966 | None:intergenic | 20.0% |
| !!! | GTTTTGTAGTTTTATTTCTT+AGG | + | chr7.1:84175606-84175625 | MS.gene021778:intron | 20.0% |
| !!! | GTTTTGTAGTTTTTTTTATG+GGG | - | chr7.1:84175394-84175413 | None:intergenic | 20.0% |
| !!! | TTTGTAGTTTTATTTCTTAG+GGG | + | chr7.1:84175608-84175627 | MS.gene021778:intron | 20.0% |
| !!! | TTTTGTAGTTTTTTTTATGG+GGG | - | chr7.1:84175393-84175412 | None:intergenic | 20.0% |
| ! | AATAATGTGAACTATGAACA+TGG | - | chr7.1:84174840-84174859 | None:intergenic | 25.0% |
| ! | CAATAATATAAATGAGCATG+AGG | + | chr7.1:84174084-84174103 | MS.gene021778:CDS | 25.0% |
| ! | CTCATGCTCATTTATATTAT+TGG | - | chr7.1:84174086-84174105 | None:intergenic | 25.0% |
| ! | TATCATGTGTATCTAAAAAC+AGG | + | chr7.1:84173980-84173999 | MS.gene021778:CDS | 25.0% |
| ! | TCTATCTTCTATAAGAAACA+TGG | + | chr7.1:84176075-84176094 | MS.gene021778:CDS | 25.0% |
| ! | TTATATGGAAAATTGGATGT+GGG | + | chr7.1:84174337-84174356 | MS.gene021778:CDS | 25.0% |
| ! | TTTATATGGAAAATTGGATG+TGG | + | chr7.1:84174336-84174355 | MS.gene021778:CDS | 25.0% |
| !! | CACATTCATGTGAAATATTT+TGG | + | chr7.1:84175897-84175916 | MS.gene021778:intron | 25.0% |
| !! | CATTCATGTGAAATATTTTG+GGG | + | chr7.1:84175899-84175918 | MS.gene021778:intron | 25.0% |
| !!! | ATCCAAACATTTTTTTTGTG+TGG | + | chr7.1:84175971-84175990 | MS.gene021778:intron | 25.0% |
| !!! | CAACTTCAAGTGATTTTAAT+GGG | - | chr7.1:84176410-84176429 | None:intergenic | 25.0% |
| !!! | CGGTTTTGTAGTTTTTTTTA+TGG | - | chr7.1:84175396-84175415 | None:intergenic | 25.0% |
| !!! | TCCAAACATTTTTTTTGTGT+GGG | + | chr7.1:84175972-84175991 | MS.gene021778:intron | 25.0% |
| !!! | TCGTGTTCAACAATTTTTTT+TGG | - | chr7.1:84175682-84175701 | None:intergenic | 25.0% |
| !!! | TTCCTAGTTTTCTATGTAAA+AGG | + | chr7.1:84175821-84175840 | MS.gene021778:intron | 25.0% |
| !!! | TTGTAGTTTTATTTCTTAGG+GGG | + | chr7.1:84175609-84175628 | MS.gene021778:intron | 25.0% |
| AATTAACAAGGAAGCTATAG+AGG | + | chr7.1:84173913-84173932 | MS.gene021778:CDS | 30.0% | |
| ATAATACTTGACCAATGACT+TGG | - | chr7.1:84173786-84173805 | None:intergenic | 30.0% | |
| ATCACTAATGTATCATGTCA+TGG | + | chr7.1:84176196-84176215 | MS.gene021778:intron | 30.0% | |
| ATGATAACTAACCAGACATT+AGG | - | chr7.1:84174655-84174674 | None:intergenic | 30.0% | |
| CACATGAATGTGTTCAAATA+AGG | - | chr7.1:84175889-84175908 | None:intergenic | 30.0% | |
| CATACAGGAATGAATTCTTT+GGG | + | chr7.1:84174379-84174398 | MS.gene021778:CDS | 30.0% | |
| GTAAAACTCATGAAAAAGCT+AGG | - | chr7.1:84175855-84175874 | None:intergenic | 30.0% | |
| GTTATTACTAACAAAATGGG+AGG | + | chr7.1:84174250-84174269 | MS.gene021778:CDS | 30.0% | |
| TAAAGAGGATTTGTCAACAA+TGG | + | chr7.1:84174546-84174565 | MS.gene021778:CDS | 30.0% | |
| TAGAACCAGCAAAATCTTTA+GGG | - | chr7.1:84174054-84174073 | None:intergenic | 30.0% | |
| TATGCCTTCTAATGTTTAGT+TGG | + | chr7.1:84176493-84176512 | MS.gene021778:intron | 30.0% | |
| TCACATTATTGTGATGTTGA+TGG | + | chr7.1:84174850-84174869 | MS.gene021778:CDS | 30.0% | |
| TCATACAGGAATGAATTCTT+TGG | + | chr7.1:84174378-84174397 | MS.gene021778:CDS | 30.0% | |
| TCATGCATGTGCAAAAAAAT+TGG | - | chr7.1:84175461-84175480 | None:intergenic | 30.0% | |
| TCCCACACAAAAAAAATGTT+TGG | - | chr7.1:84175976-84175995 | None:intergenic | 30.0% | |
| TCTAAACAAATGAGGATTCT+TGG | + | chr7.1:84173722-84173741 | MS.gene021778:CDS | 30.0% | |
| TGATAACTAACCAGACATTA+GGG | - | chr7.1:84174654-84174673 | None:intergenic | 30.0% | |
| TTGAAGCTAACAACAAATTC+TGG | - | chr7.1:84175051-84175070 | None:intergenic | 30.0% | |
| ! | ACACAAAAGTTGTTTCATAC+AGG | + | chr7.1:84174364-84174383 | MS.gene021778:CDS | 30.0% |
| ! | GCAACTTCAAGTGATTTTAA+TGG | - | chr7.1:84176411-84176430 | None:intergenic | 30.0% |
| ! | TAGTTTGTCGATGATTAACT+TGG | - | chr7.1:84175208-84175227 | None:intergenic | 30.0% |
| ! | TATTGTGATGTTGATGGAAA+CGG | + | chr7.1:84174856-84174875 | MS.gene021778:CDS | 30.0% |
| ! | TCAATTTCCAAAGTACTATG+TGG | + | chr7.1:84174993-84175012 | MS.gene021778:CDS | 30.0% |
| ! | TGCCTTTTACATAGAAAACT+AGG | - | chr7.1:84175826-84175845 | None:intergenic | 30.0% |
| ! | TTTTTCCCTAAAGATTTTGC+TGG | + | chr7.1:84174046-84174065 | MS.gene021778:CDS | 30.0% |
| AAGCAAGCTGATATCACAAA+AGG | + | chr7.1:84174478-84174497 | MS.gene021778:CDS | 35.0% | |
| AAGCCATATATGCATTTGGA+TGG | - | chr7.1:84174604-84174623 | None:intergenic | 35.0% | |
| ACCAAATTAACAACATCCTC+TGG | - | chr7.1:84173878-84173897 | None:intergenic | 35.0% | |
| ACGTCGATAAGAAACATAGT+AGG | - | chr7.1:84176109-84176128 | None:intergenic | 35.0% | |
| ACTTACTAACCACTTTACTC+TGG | + | chr7.1:84175249-84175268 | MS.gene021778:intron | 35.0% | |
| AGACTATCTGCATTCTACAA+TGG | + | chr7.1:84175760-84175779 | MS.gene021778:CDS | 35.0% | |
| AGTCAGATGTGTAACACATT+GGG | - | chr7.1:84173675-84173694 | None:intergenic | 35.0% | |
| ATAAGAAACATAGTAGGGGA+AGG | - | chr7.1:84176103-84176122 | None:intergenic | 35.0% | |
| ATACCATCAACAATGCATAC+TGG | - | chr7.1:84176132-84176151 | None:intergenic | 35.0% | |
| ATATCACCTTCAAACACCAA+AGG | - | chr7.1:84175078-84175097 | None:intergenic | 35.0% | |
| ATATCTAACACTGAGACACA+TGG | - | chr7.1:84175124-84175143 | None:intergenic | 35.0% | |
| ATCACAACTTCGTGAAAGTT+AGG | - | chr7.1:84175365-84175384 | None:intergenic | 35.0% | |
| ATTACTAACAAAATGGGAGG+AGG | + | chr7.1:84174253-84174272 | MS.gene021778:CDS | 35.0% | |
| CGTCGATAAGAAACATAGTA+GGG | - | chr7.1:84176108-84176127 | None:intergenic | 35.0% | |
| CTGATATCACAAAAGGAGTT+CGG | + | chr7.1:84174485-84174504 | MS.gene021778:CDS | 35.0% | |
| GAAGCCAACTAAACATTAGA+AGG | - | chr7.1:84176500-84176519 | None:intergenic | 35.0% | |
| GTAGAACCAGCAAAATCTTT+AGG | - | chr7.1:84174055-84174074 | None:intergenic | 35.0% | |
| GTCGATAAGAAACATAGTAG+GGG | - | chr7.1:84176107-84176126 | None:intergenic | 35.0% | |
| GTTTACAACAACCTATTGCT+TGG | + | chr7.1:84174002-84174021 | MS.gene021778:CDS | 35.0% | |
| TATCACCTTCAAACACCAAA+GGG | - | chr7.1:84175077-84175096 | None:intergenic | 35.0% | |
| TCACAACTTCGTGAAAGTTA+GGG | - | chr7.1:84175364-84175383 | None:intergenic | 35.0% | |
| TCCAAATGCATATATGGCTT+TGG | + | chr7.1:84174604-84174623 | MS.gene021778:CDS | 35.0% | |
| TCCAGAGGATGTTGTTAATT+TGG | + | chr7.1:84173874-84173893 | MS.gene021778:CDS | 35.0% | |
| TCTCCATCCAAATGCATATA+TGG | + | chr7.1:84174598-84174617 | MS.gene021778:CDS | 35.0% | |
| TGATATCACAAAAGGAGTTC+GGG | + | chr7.1:84174486-84174505 | MS.gene021778:CDS | 35.0% | |
| TGCTACAGATGCAAAACTTA+GGG | - | chr7.1:84175421-84175440 | None:intergenic | 35.0% | |
| TTCCAAACCACATAGTACTT+TGG | - | chr7.1:84175003-84175022 | None:intergenic | 35.0% | |
| ! | ACTAAATCAAAAGCGCAAGA+GGG | + | chr7.1:84173646-84173665 | MS.gene021778:CDS | 35.0% |
| ! | ATGTGCAAAAAAATTGGCCT+TGG | - | chr7.1:84175455-84175474 | None:intergenic | 35.0% |
| ! | TTCCAAAGTACTATGTGGTT+TGG | + | chr7.1:84174998-84175017 | MS.gene021778:CDS | 35.0% |
| ! | TTGTCAACAATGGTGGAATA+TGG | + | chr7.1:84174556-84174575 | MS.gene021778:CDS | 35.0% |
| ! | TTTTGCATCTGTAGCAGTTT+TGG | + | chr7.1:84175425-84175444 | MS.gene021778:intron | 35.0% |
| !! | ATTTTGGGGAATTCTTCTTC+TGG | + | chr7.1:84175913-84175932 | MS.gene021778:intron | 35.0% |
| !! | CTTCAAGTGATTTTAATGGG+TGG | - | chr7.1:84176407-84176426 | None:intergenic | 35.0% |
| !! | GAAGATAGAAGCACTGAAAA+AGG | - | chr7.1:84176064-84176083 | None:intergenic | 35.0% |
| !! | TGTGCAAAAAAATTGGCCTT+GGG | - | chr7.1:84175454-84175473 | None:intergenic | 35.0% |
| !! | TTGTGATATCAGCTTGCTTT+TGG | - | chr7.1:84174477-84174496 | None:intergenic | 35.0% |
| !!! | GTAAGCTTTTTCACGAGTTT+TGG | + | chr7.1:84175788-84175807 | MS.gene021778:intron | 35.0% |
| AACTAACCAGACATTAGGGT+GGG | - | chr7.1:84174650-84174669 | None:intergenic | 40.0% | |
| ACAACTTCGTGAAAGTTAGG+GGG | - | chr7.1:84175362-84175381 | None:intergenic | 40.0% | |
| AGAGGATTTGTCAACAATGG+TGG | + | chr7.1:84174549-84174568 | MS.gene021778:CDS | 40.0% | |
| AGAGTTATAGCAACTCAGGA+AGG | + | chr7.1:84174425-84174444 | MS.gene021778:CDS | 40.0% | |
| AGCAGCTGCGAATATGATAA+TGG | + | chr7.1:84174958-84174977 | MS.gene021778:CDS | 40.0% | |
| AGTTTCAGAACCAACAAGTG+CGG | + | chr7.1:84173697-84173716 | MS.gene021778:CDS | 40.0% | |
| ATATCACAAAAGGAGTTCGG+GGG | + | chr7.1:84174488-84174507 | MS.gene021778:CDS | 40.0% | |
| ATCACCTTCAAACACCAAAG+GGG | - | chr7.1:84175076-84175095 | None:intergenic | 40.0% | |
| ATGATTTCGTGTCGAAGTTG+AGG | + | chr7.1:84176246-84176265 | MS.gene021778:CDS | 40.0% | |
| CAATGTGTTACACATCTGAC+TGG | + | chr7.1:84173674-84173693 | MS.gene021778:CDS | 40.0% | |
| CACAACTTCGTGAAAGTTAG+GGG | - | chr7.1:84175363-84175382 | None:intergenic | 40.0% | |
| CAGTCAGATGTGTAACACAT+TGG | - | chr7.1:84173676-84173695 | None:intergenic | 40.0% | |
| CTAACCACTTTACTCTGGTT+TGG | + | chr7.1:84175254-84175273 | MS.gene021778:intron | 40.0% | |
| CTACAGATGCAAAACTTAGG+GGG | - | chr7.1:84175419-84175438 | None:intergenic | 40.0% | |
| CTGCTACAGATGCAAAACTT+AGG | - | chr7.1:84175422-84175441 | None:intergenic | 40.0% | |
| GATATCACAAAAGGAGTTCG+GGG | + | chr7.1:84174487-84174506 | MS.gene021778:CDS | 40.0% | |
| GCAGCTGCGAATATGATAAT+GGG | + | chr7.1:84174959-84174978 | MS.gene021778:CDS | 40.0% | |
| GCCAAAGCCATATATGCATT+TGG | - | chr7.1:84174608-84174627 | None:intergenic | 40.0% | |
| GCTACAGATGCAAAACTTAG+GGG | - | chr7.1:84175420-84175439 | None:intergenic | 40.0% | |
| GCTATAGAGGTAGAGTTAGA+TGG | + | chr7.1:84173926-84173945 | MS.gene021778:CDS | 40.0% | |
| GGAGATAGTTCATAGTTACC+CGG | - | chr7.1:84174583-84174602 | None:intergenic | 40.0% | |
| GTCCTATGTCGTGTCATAAT+GGG | + | chr7.1:84174892-84174911 | MS.gene021778:CDS | 40.0% | |
| GTGCGGTTTCTAAACAAATG+AGG | + | chr7.1:84173714-84173733 | MS.gene021778:CDS | 40.0% | |
| TAACTAACCAGACATTAGGG+TGG | - | chr7.1:84174651-84174670 | None:intergenic | 40.0% | |
| TCCTGGTATTTCCAAGTCAT+TGG | + | chr7.1:84173772-84173791 | MS.gene021778:CDS | 40.0% | |
| TCGAAGTTGAGGTCAATTGT+TGG | + | chr7.1:84176257-84176276 | MS.gene021778:CDS | 40.0% | |
| TGAATGGTTGAACTATCCAG+AGG | + | chr7.1:84173859-84173878 | MS.gene021778:CDS | 40.0% | |
| TGGAAACGGAATCAAGCATA+TGG | + | chr7.1:84174870-84174889 | MS.gene021778:CDS | 40.0% | |
| TGTTCTACAACAACGGTGAA+TGG | + | chr7.1:84173843-84173862 | MS.gene021778:CDS | 40.0% | |
| TGTTTAGAAACCGCACTTGT+TGG | - | chr7.1:84173710-84173729 | None:intergenic | 40.0% | |
| TTATCATATTCGCAGCTGCT+TGG | - | chr7.1:84174958-84174977 | None:intergenic | 40.0% | |
| TTCCCATTATGACACGACAT+AGG | - | chr7.1:84174897-84174916 | None:intergenic | 40.0% | |
| TTTGCCAAACCAGAGTAAAG+TGG | - | chr7.1:84175261-84175280 | None:intergenic | 40.0% | |
| ! | AACAATGGTGGAATATGGAC+CGG | + | chr7.1:84174561-84174580 | MS.gene021778:CDS | 40.0% |
| ! | ACAAAAACCCTCAAAGGCAT+TGG | + | chr7.1:84173613-84173632 | MS.gene021778:CDS | 40.0% |
| ! | ACCAATGACTTGGAAATACC+AGG | - | chr7.1:84173776-84173795 | None:intergenic | 40.0% |
| ! | ATCGCAACTTTGGGAAAGTT+AGG | + | chr7.1:84175637-84175656 | MS.gene021778:intron | 40.0% |
| ! | CACTAAATCAAAAGCGCAAG+AGG | + | chr7.1:84173645-84173664 | MS.gene021778:CDS | 40.0% |
| ! | CAGCTGCGAATATGATAATG+GGG | + | chr7.1:84174960-84174979 | MS.gene021778:CDS | 40.0% |
| ! | CTTTCCCAAAGTTGCGATTT+TGG | - | chr7.1:84175635-84175654 | None:intergenic | 40.0% |
| ! | GGAGTACTTGTCATGTTAGT+AGG | - | chr7.1:84176025-84176044 | None:intergenic | 40.0% |
| ! | TCGCAACTTTGGGAAAGTTA+GGG | + | chr7.1:84175638-84175657 | MS.gene021778:intron | 40.0% |
| ! | TCGTGTCATAATGGGAAACA+TGG | + | chr7.1:84174900-84174919 | MS.gene021778:CDS | 40.0% |
| !! | GTGCAAAAAAATTGGCCTTG+GGG | - | chr7.1:84175453-84175472 | None:intergenic | 40.0% |
| !! | TGCAAAAAAATTGGCCTTGG+GGG | - | chr7.1:84175452-84175471 | None:intergenic | 40.0% |
| AAACCAGATGACTCTGATCC+TGG | + | chr7.1:84173755-84173774 | MS.gene021778:CDS | 45.0% | |
| AACACGTGGCACCTAACTTA+GGG | + | chr7.1:84175508-84175527 | MS.gene021778:intron | 45.0% | |
| AACATGGAGCTTCTTCATCC+TGG | + | chr7.1:84174916-84174935 | MS.gene021778:CDS | 45.0% | |
| AACTCCATCCAATGCCTTTG+AGG | - | chr7.1:84173624-84173643 | None:intergenic | 45.0% | |
| AAGCCACGCATAACGAACAT+TGG | - | chr7.1:84174518-84174537 | None:intergenic | 45.0% | |
| ACCTATTGCTTGGATTGACG+AGG | + | chr7.1:84174012-84174031 | MS.gene021778:CDS | 45.0% | |
| ACTCCATCCAATGCCTTTGA+GGG | - | chr7.1:84173623-84173642 | None:intergenic | 45.0% | |
| ATACCAGGATCAGAGTCATC+TGG | - | chr7.1:84173761-84173780 | None:intergenic | 45.0% | |
| ATTGCTTGGATTGACGAGGA+AGG | + | chr7.1:84174016-84174035 | MS.gene021778:CDS | 45.0% | |
| CGTCCAGTATGCATTGTTGA+TGG | + | chr7.1:84176126-84176145 | MS.gene021778:CDS | 45.0% | |
| GGGAGGAGGAAATGTTGATA+TGG | + | chr7.1:84174267-84174286 | MS.gene021778:CDS | 45.0% | |
| GGGGCAGATGAATCAAAGTT+GGG | + | chr7.1:84174172-84174191 | MS.gene021778:CDS | 45.0% | |
| GGTCCTATGTCGTGTCATAA+TGG | + | chr7.1:84174891-84174910 | MS.gene021778:CDS | 45.0% | |
| GTCGAGAGTTATAGCAACTC+AGG | + | chr7.1:84174421-84174440 | MS.gene021778:CDS | 45.0% | |
| TAACACGTGGCACCTAACTT+AGG | + | chr7.1:84175507-84175526 | MS.gene021778:intron | 45.0% | |
| TATCACAAAAGGAGTTCGGG+GGG | + | chr7.1:84174489-84174508 | MS.gene021778:CDS | 45.0% | |
| TCCTCGTCAATCCAAGCAAT+AGG | - | chr7.1:84174016-84174035 | None:intergenic | 45.0% | |
| TGCCACAGGTGCAAAACTTA+GGG | + | chr7.1:84175579-84175598 | MS.gene021778:intron | 45.0% | |
| TGCGTAGACCGAGTCAAAAT+TGG | + | chr7.1:84175540-84175559 | MS.gene021778:intron | 45.0% | |
| TGGGGCAGATGAATCAAAGT+TGG | + | chr7.1:84174171-84174190 | MS.gene021778:CDS | 45.0% | |
| TGTCATGTTAGTAGGCACAC+TGG | - | chr7.1:84176017-84176036 | None:intergenic | 45.0% | |
| TTGCTTGGATTGACGAGGAA+GGG | + | chr7.1:84174017-84174036 | MS.gene021778:CDS | 45.0% | |
| ! | AAGTTGGGAGAGTATAGTCG+AGG | + | chr7.1:84174187-84174206 | MS.gene021778:CDS | 45.0% |
| ! | ACAATGGTGGAATATGGACC+GGG | + | chr7.1:84174562-84174581 | MS.gene021778:CDS | 45.0% |
| ! | AGTTGGGAGAGTATAGTCGA+GGG | + | chr7.1:84174188-84174207 | MS.gene021778:CDS | 45.0% |
| ! | CGCAACTTTGGGAAAGTTAG+GGG | + | chr7.1:84175639-84175658 | MS.gene021778:intron | 45.0% |
| ! | GCAACTTTGGGAAAGTTAGG+GGG | + | chr7.1:84175640-84175659 | MS.gene021778:intron | 45.0% |
| ! | GGAAAAAGTTGATCACTGCC+AGG | - | chr7.1:84174937-84174956 | None:intergenic | 45.0% |
| ! | TGTTAGCTTCAAGTCCCCTT+TGG | + | chr7.1:84175059-84175078 | MS.gene021778:CDS | 45.0% |
| ! | TTTTGCACCTGTGGCAGTTT+TGG | - | chr7.1:84175575-84175594 | None:intergenic | 45.0% |
| !! | AAACCCTCAAAGGCATTGGA+TGG | + | chr7.1:84173617-84173636 | MS.gene021778:CDS | 45.0% |
| !! | AAGTCCCCTTTGGTGTTTGA+AGG | + | chr7.1:84175069-84175088 | MS.gene021778:CDS | 45.0% |
| !! | ACCGAGTCAAAATTGGCCTT+GGG | + | chr7.1:84175547-84175566 | MS.gene021778:intron | 45.0% |
| !! | AGCACTGAAAAAGGCATCCT+AGG | - | chr7.1:84176055-84176074 | None:intergenic | 45.0% |
| !! | CACTGAAAAAGGCATCCTAG+GGG | - | chr7.1:84176053-84176072 | None:intergenic | 45.0% |
| !! | CTGCGAATATGATAATGGGG+TGG | + | chr7.1:84174963-84174982 | MS.gene021778:CDS | 45.0% |
| !! | GCAAAAAAATTGGCCTTGGG+GGG | - | chr7.1:84175451-84175470 | None:intergenic | 45.0% |
| !! | GCACTGAAAAAGGCATCCTA+GGG | - | chr7.1:84176054-84176073 | None:intergenic | 45.0% |
| !! | GTGGCTTGCTTGTTCTAAAG+AGG | + | chr7.1:84174531-84174550 | MS.gene021778:CDS | 45.0% |
| !!! | TTTTTTGTGTGGGATGCCTC+AGG | + | chr7.1:84175982-84176001 | MS.gene021778:intron | 45.0% |
| ACGCCAATGTTCGTTATGCG+TGG | + | chr7.1:84174512-84174531 | MS.gene021778:CDS | 50.0% | |
| CAAGTACTCCAAGTTCCCCT+AGG | + | chr7.1:84176035-84176054 | MS.gene021778:CDS | 50.0% | |
| CAGATGCAAAACTTAGGGGG+CGG | - | chr7.1:84175416-84175435 | None:intergenic | 50.0% | |
| CCACAGGTGCAAAACTTAGG+GGG | + | chr7.1:84175581-84175600 | MS.gene021778:intron | 50.0% | |
| CTGCCACAGGTGCAAAACTT+AGG | + | chr7.1:84175578-84175597 | MS.gene021778:intron | 50.0% | |
| CTGTTACCCACCCTAATGTC+TGG | + | chr7.1:84174641-84174660 | MS.gene021778:CDS | 50.0% | |
| GAGTCATTTGACCCACCACT+TGG | - | chr7.1:84176535-84176554 | None:intergenic | 50.0% | |
| GCCACAGGTGCAAAACTTAG+GGG | + | chr7.1:84175580-84175599 | MS.gene021778:intron | 50.0% | |
| GGGGCCAAAATCGCAACTTT+GGG | + | chr7.1:84175628-84175647 | MS.gene021778:intron | 50.0% | |
| TCATTTGACCCACCACTTGG+TGG | - | chr7.1:84176532-84176551 | None:intergenic | 50.0% | |
| TTCTTGCAGAGACCACCAAG+TGG | + | chr7.1:84176517-84176536 | MS.gene021778:intron | 50.0% | |
| ! | GACCGAGTCAAAATTGGCCT+TGG | + | chr7.1:84175546-84175565 | MS.gene021778:intron | 50.0% |
| !! | AAAGGCATCCTAGGGGAACT+TGG | - | chr7.1:84176046-84176065 | None:intergenic | 50.0% |
| !! | ACACTGGTAGCTTTGACCTG+AGG | - | chr7.1:84176001-84176020 | None:intergenic | 50.0% |
| !! | CCGAGTCAAAATTGGCCTTG+GGG | + | chr7.1:84175548-84175567 | MS.gene021778:intron | 50.0% |
| !! | CGAGTCAAAATTGGCCTTGG+GGG | + | chr7.1:84175549-84175568 | MS.gene021778:intron | 50.0% |
| !!! | CCCCAAGGCCAATTTTGACT+CGG | - | chr7.1:84175551-84175570 | None:intergenic | 50.0% |
| CAGACGTGGCACCCTAAGTT+AGG | - | chr7.1:84175522-84175541 | None:intergenic | 55.0% | |
| CAGGTGCAAAACTTAGGGGG+CGG | + | chr7.1:84175584-84175603 | MS.gene021778:intron | 55.0% | |
| GGGGGCCAAAATCGCAACTT+TGG | + | chr7.1:84175627-84175646 | MS.gene021778:intron | 55.0% | |
| TGCAGAGACCACCAAGTGGT+GGG | + | chr7.1:84176521-84176540 | MS.gene021778:intron | 55.0% | |
| TTGCAGAGACCACCAAGTGG+TGG | + | chr7.1:84176520-84176539 | MS.gene021778:intron | 55.0% | |
| ! | CCCCCTAAGTTTTGCACCTG+TGG | - | chr7.1:84175584-84175603 | None:intergenic | 55.0% |
| TTGGGGGCCAAAACTGCCAC+AGG | + | chr7.1:84175565-84175584 | MS.gene021778:intron | 60.0% | |
| !! | GTAGCAGTTTTGGCCCCCCA+AGG | + | chr7.1:84175435-84175454 | MS.gene021778:intron | 60.0% |
| !! | TGACTCGGTCTACGCAGACG+TGG | - | chr7.1:84175536-84175555 | None:intergenic | 60.0% |
| !! | TGTGGCAGTTTTGGCCCCCA+AGG | - | chr7.1:84175566-84175585 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 84173608 | 84176573 | 84173608 | ID=MS.gene021778 |
| chr7.1 | mRNA | 84173608 | 84176573 | 84173608 | ID=MS.gene021778.t1;Parent=MS.gene021778 |
| chr7.1 | exon | 84173608 | 84174662 | 84173608 | ID=MS.gene021778.t1.exon1;Parent=MS.gene021778.t1 |
| chr7.1 | CDS | 84173608 | 84174662 | 84173608 | ID=cds.MS.gene021778.t1;Parent=MS.gene021778.t1 |
| chr7.1 | exon | 84174849 | 84175090 | 84174849 | ID=MS.gene021778.t1.exon2;Parent=MS.gene021778.t1 |
| chr7.1 | CDS | 84174849 | 84175090 | 84174849 | ID=cds.MS.gene021778.t1;Parent=MS.gene021778.t1 |
| chr7.1 | exon | 84175729 | 84175787 | 84175729 | ID=MS.gene021778.t1.exon3;Parent=MS.gene021778.t1 |
| chr7.1 | CDS | 84175729 | 84175787 | 84175729 | ID=cds.MS.gene021778.t1;Parent=MS.gene021778.t1 |
| chr7.1 | exon | 84176004 | 84176147 | 84176004 | ID=MS.gene021778.t1.exon4;Parent=MS.gene021778.t1 |
| chr7.1 | CDS | 84176004 | 84176147 | 84176004 | ID=cds.MS.gene021778.t1;Parent=MS.gene021778.t1 |
| chr7.1 | exon | 84176227 | 84176322 | 84176227 | ID=MS.gene021778.t1.exon5;Parent=MS.gene021778.t1 |
| chr7.1 | CDS | 84176227 | 84176322 | 84176227 | ID=cds.MS.gene021778.t1;Parent=MS.gene021778.t1 |
| chr7.1 | exon | 84176526 | 84176573 | 84176526 | ID=MS.gene021778.t1.exon6;Parent=MS.gene021778.t1 |
| chr7.1 | CDS | 84176526 | 84176573 | 84176526 | ID=cds.MS.gene021778.t1;Parent=MS.gene021778.t1 |
| Gene Sequence |
| Protein sequence |
