Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070621.t1 | XP_003621296.1 | 65.3 | 547 | 181 | 1 | 1 | 538 | 1 | 547 | 6.00E-197 | 697.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070621.t1 | Q8RY59 | 34.5 | 577 | 322 | 12 | 1 | 526 | 1 | 572 | 1.1e-79 | 298.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070621.t1 | A2Q3R6 | 65.3 | 547 | 181 | 1 | 1 | 538 | 1 | 547 | 4.3e-197 | 697.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070621 | MS.gene046409 | PPI |
| MS.gene070621 | MS.gene032270 | PPI |
| MS.gene070621 | MS.gene057563 | PPI |
| MS.gene79552 | MS.gene070621 | PPI |
| MS.gene070621 | MS.gene065039 | PPI |
| MS.gene007901 | MS.gene070621 | PPI |
| MS.gene070621 | MS.gene74956 | PPI |
| MS.gene070621 | MS.gene001066 | PPI |
| MS.gene070621 | MS.gene021778 | PPI |
| MS.gene070621 | MS.gene029308 | PPI |
| MS.gene070621 | MS.gene76207 | PPI |
| MS.gene34237 | MS.gene070621 | PPI |
| MS.gene74956 | MS.gene070621 | PPI |
| MS.gene070621 | MS.gene046455 | PPI |
| MS.gene070621 | MS.gene070678 | PPI |
| MS.gene057563 | MS.gene070621 | PPI |
| MS.gene046444 | MS.gene070621 | PPI |
| MS.gene070621 | MS.gene027783 | PPI |
| MS.gene36039 | MS.gene070621 | PPI |
| MS.gene070678 | MS.gene070621 | PPI |
| MS.gene070621 | MS.gene069103 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070621.t1 | MTR_7g011550 | 65.265 | 547 | 181 | 1 | 1 | 538 | 1 | 547 | 0.0 | 723 |
| MS.gene070621.t1 | MTR_1g112330 | 46.007 | 576 | 255 | 9 | 1 | 527 | 1 | 569 | 2.01e-159 | 466 |
| MS.gene070621.t1 | MTR_1g112330 | 46.749 | 569 | 258 | 10 | 1 | 527 | 1 | 566 | 2.20e-159 | 466 |
| MS.gene070621.t1 | MTR_5g032190 | 43.310 | 568 | 268 | 9 | 1 | 523 | 1 | 559 | 6.04e-153 | 449 |
| MS.gene070621.t1 | MTR_1g112330 | 50.218 | 458 | 200 | 6 | 1 | 433 | 1 | 455 | 4.36e-145 | 426 |
| MS.gene070621.t1 | MTR_5g032190 | 46.377 | 483 | 233 | 6 | 1 | 462 | 1 | 478 | 3.13e-142 | 419 |
| MS.gene070621.t1 | MTR_5g032190 | 46.947 | 475 | 226 | 6 | 1 | 454 | 1 | 470 | 6.26e-142 | 418 |
| MS.gene070621.t1 | MTR_5g029580 | 54.328 | 335 | 136 | 4 | 203 | 524 | 19 | 349 | 1.90e-119 | 356 |
| MS.gene070621.t1 | MTR_2g090130 | 44.000 | 200 | 73 | 2 | 208 | 403 | 53 | 217 | 3.22e-41 | 148 |
| MS.gene070621.t1 | MTR_2g090130 | 44.667 | 150 | 36 | 2 | 1 | 150 | 1 | 103 | 7.43e-30 | 117 |
| MS.gene070621.t1 | MTR_7g011640 | 62.069 | 116 | 27 | 1 | 90 | 205 | 15 | 113 | 5.89e-37 | 134 |
| MS.gene070621.t1 | MTR_4g105740 | 29.893 | 281 | 154 | 8 | 257 | 524 | 54 | 304 | 7.13e-33 | 128 |
| MS.gene070621.t1 | MTR_4g105740 | 30.000 | 280 | 153 | 8 | 257 | 523 | 54 | 303 | 1.11e-32 | 127 |
| MS.gene070621.t1 | MTR_7g011880 | 47.917 | 144 | 48 | 3 | 351 | 491 | 53 | 172 | 7.04e-32 | 122 |
| MS.gene070621.t1 | MTR_3g077870 | 29.123 | 285 | 149 | 8 | 257 | 525 | 67 | 314 | 6.70e-27 | 111 |
| MS.gene070621.t1 | MTR_7g061850 | 52.041 | 98 | 47 | 0 | 213 | 310 | 26 | 123 | 1.34e-25 | 102 |
| MS.gene070621.t1 | MTR_8g088250 | 29.964 | 277 | 157 | 10 | 254 | 517 | 27 | 279 | 9.95e-24 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070621.t1 | AT1G32230 | 35.079 | 573 | 313 | 13 | 1 | 521 | 1 | 566 | 1.18e-98 | 310 |
| MS.gene070621.t1 | AT1G32230 | 34.948 | 578 | 317 | 13 | 1 | 526 | 1 | 571 | 1.64e-98 | 310 |
| MS.gene070621.t1 | AT1G32230 | 34.948 | 578 | 317 | 13 | 1 | 526 | 1 | 571 | 1.64e-98 | 310 |
| MS.gene070621.t1 | AT1G32230 | 34.948 | 578 | 317 | 13 | 1 | 526 | 1 | 571 | 1.64e-98 | 310 |
| MS.gene070621.t1 | AT1G32230 | 34.948 | 578 | 317 | 13 | 1 | 526 | 1 | 571 | 1.64e-98 | 310 |
| MS.gene070621.t1 | AT1G32230 | 34.489 | 577 | 322 | 12 | 1 | 526 | 1 | 572 | 3.48e-98 | 309 |
| MS.gene070621.t1 | AT2G35510 | 36.347 | 542 | 291 | 14 | 23 | 521 | 34 | 564 | 6.39e-92 | 292 |
| MS.gene070621.t1 | AT2G35510 | 36.347 | 542 | 291 | 14 | 23 | 521 | 34 | 564 | 6.39e-92 | 292 |
| MS.gene070621.t1 | AT2G35510 | 39.486 | 428 | 236 | 10 | 23 | 435 | 34 | 453 | 1.71e-89 | 283 |
| MS.gene070621.t1 | AT1G23550 | 31.271 | 291 | 148 | 10 | 249 | 519 | 56 | 314 | 8.06e-35 | 134 |
| MS.gene070621.t1 | AT1G70440 | 29.433 | 282 | 147 | 6 | 257 | 519 | 54 | 302 | 2.21e-30 | 121 |
| MS.gene070621.t1 | AT1G70440 | 29.433 | 282 | 147 | 6 | 257 | 519 | 54 | 302 | 2.21e-30 | 121 |
| MS.gene070621.t1 | AT5G62520 | 30.182 | 275 | 143 | 8 | 268 | 525 | 66 | 308 | 2.39e-29 | 118 |
| MS.gene070621.t1 | AT5G62520 | 34.706 | 170 | 99 | 4 | 268 | 429 | 66 | 231 | 1.97e-24 | 102 |
| MS.gene070621.t1 | AT3G47720 | 29.478 | 268 | 134 | 10 | 262 | 520 | 87 | 308 | 4.98e-24 | 103 |
Find 129 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAAAAGAAATTAAATATT+TGG | 0.151924 | 7.1:-84274741 | MS.gene070621:CDS |
| CTTCTGCTCGCTTATATTAT+TGG | 0.183427 | 7.1:+84275458 | None:intergenic |
| TTGTGATATCAGCTTGCTTC+TGG | 0.216854 | 7.1:+84275067 | None:intergenic |
| TCATAACATCACTAACAAAA+TGG | 0.222623 | 7.1:-84275295 | MS.gene070621:CDS |
| GCACAGAAGTTGTTTCTTAC+AGG | 0.226200 | 7.1:-84275177 | MS.gene070621:CDS |
| AAGATTTCCCGTGATGATTT+CGG | 0.234117 | 7.1:-84273617 | MS.gene070621:CDS |
| AGATTTCCCGTGATGATTTC+GGG | 0.234848 | 7.1:-84273616 | MS.gene070621:CDS |
| CGTCTACAAGAAACATAATA+TGG | 0.249315 | 7.1:+84273752 | None:intergenic |
| TTCTGCTCGCTTATATTATT+GGG | 0.260928 | 7.1:+84275459 | None:intergenic |
| AAATGAAGCCAAGGGGAATT+TGG | 0.267347 | 7.1:+84273814 | None:intergenic |
| TCTCCATCCAAATGCAAATA+TGG | 0.289194 | 7.1:-84274943 | MS.gene070621:CDS |
| TTAGATGATTATACTGAATC+TGG | 0.296296 | 7.1:-84275225 | MS.gene070621:CDS |
| TGAATCTGGATATGGAAAAT+TGG | 0.304135 | 7.1:-84275211 | MS.gene070621:CDS |
| GGTTCTATGTCGTGTCATAA+TGG | 0.312868 | 7.1:-84274720 | MS.gene070621:CDS |
| TTGTCAATAATGATGAAATA+TGG | 0.324794 | 7.1:-84274985 | MS.gene070621:CDS |
| TGCAATCAATCTCGTTTGTT+TGG | 0.327430 | 7.1:+84275818 | None:intergenic |
| GTTCTATGTCGTGTCATAAT+GGG | 0.327778 | 7.1:-84274719 | MS.gene070621:CDS |
| TTGAAGCTGACAACAAATTC+TGG | 0.328489 | 7.1:+84274563 | None:intergenic |
| TCCAAATGCAAATATGGATT+TGG | 0.337120 | 7.1:-84274937 | MS.gene070621:CDS |
| GATTATACTGAATCTGGATA+TGG | 0.340358 | 7.1:-84275219 | MS.gene070621:CDS |
| ACCAAATCCATATTTGCATT+TGG | 0.340512 | 7.1:+84274936 | None:intergenic |
| TCACTTTATTGTGATGTTGA+TGG | 0.354266 | 7.1:-84274761 | MS.gene070621:CDS |
| AGTGGTTGCGAATATGATAA+TGG | 0.357908 | 7.1:-84274653 | MS.gene070621:CDS |
| CTTACAGGAATGACTGCTTT+GGG | 0.373340 | 7.1:-84275162 | MS.gene070621:CDS |
| TCCCAAAGTACTATGTGGTT+TGG | 0.380192 | 7.1:-84274613 | MS.gene070621:CDS |
| TCCAAACCACATAGTACTTT+GGG | 0.384520 | 7.1:+84274612 | None:intergenic |
| CTGTTACCTACCCTTATCTC+TGG | 0.397068 | 7.1:-84274900 | MS.gene070621:intron |
| CCAAGTTAGGAGGGTATAGT+TGG | 0.399257 | 7.1:-84275356 | MS.gene070621:CDS |
| TTCCAAACCACATAGTACTT+TGG | 0.400302 | 7.1:+84274611 | None:intergenic |
| TCTTACAGGAATGACTGCTT+TGG | 0.410682 | 7.1:-84275163 | MS.gene070621:CDS |
| CCAACTATACCCTCCTAACT+TGG | 0.411565 | 7.1:+84275356 | None:intergenic |
| TACATAAAGTATAAGAATAG+TGG | 0.413018 | 7.1:-84275738 | MS.gene070621:CDS |
| GCTATGGTGCAAGTATTTCT+AGG | 0.418377 | 7.1:-84275776 | MS.gene070621:CDS |
| CAATCAATGGTTGGACTATC+CGG | 0.418964 | 7.1:-84275685 | MS.gene070621:CDS |
| GTGGAAGATGAATCCAAGTT+AGG | 0.427587 | 7.1:-84275369 | MS.gene070621:CDS |
| TATATATAATATTCAATTCA+AGG | 0.427606 | 7.1:-84273549 | MS.gene070621:intron |
| TTATAGAACATCAACCGTTC+GGG | 0.434228 | 7.1:+84275711 | None:intergenic |
| AATCCATATTTGCATTTGGA+TGG | 0.436634 | 7.1:+84274940 | None:intergenic |
| CTTATAGAACATCAACCGTT+CGG | 0.438943 | 7.1:+84275710 | None:intergenic |
| TCAAATTTGAGGTCGATTGT+TGG | 0.451705 | 7.1:-84273593 | MS.gene070621:CDS |
| GTATCATGTCGAATTGAAAA+CGG | 0.452724 | 7.1:-84275562 | MS.gene070621:CDS |
| TGATAACAAACCAGAGATAA+GGG | 0.452916 | 7.1:+84274890 | None:intergenic |
| CATAACATCACTAACAAAAT+GGG | 0.454583 | 7.1:-84275294 | MS.gene070621:CDS |
| AAGGCCCCATTGGTTGTTGA+AGG | 0.455471 | 7.1:-84274542 | MS.gene070621:intron |
| AAAATGGGAGGTGGAAAAGT+TGG | 0.456037 | 7.1:-84275279 | MS.gene070621:CDS |
| AGGAAAGCCCTCAAAGTCAT+TGG | 0.458603 | 7.1:-84275928 | MS.gene070621:CDS |
| AGAATTTGTTGTCAGCTTCA+AGG | 0.458806 | 7.1:-84274561 | MS.gene070621:CDS |
| TGTTTGGCAACCACGCTTGT+CGG | 0.460910 | 7.1:+84275834 | None:intergenic |
| AGCTCCATCCAATGACTTTG+AGG | 0.461041 | 7.1:+84275920 | None:intergenic |
| TATCATGTCGAATTGAAAAC+GGG | 0.461703 | 7.1:-84275561 | MS.gene070621:CDS |
| ATGATAACAAACCAGAGATA+AGG | 0.463760 | 7.1:+84274889 | None:intergenic |
| GTGGTTGCGAATATGATAAT+GGG | 0.467591 | 7.1:-84274652 | MS.gene070621:CDS |
| ATGATTTCGGGTCAAATTTG+AGG | 0.471755 | 7.1:-84273604 | MS.gene070621:CDS |
| CAATCAAGTGGTGGATCAGA+TGG | 0.472471 | 7.1:-84273328 | MS.gene070621:CDS |
| TCTCATGGAAGATAAAAGAA+TGG | 0.476779 | 7.1:+84273789 | None:intergenic |
| GCTCCATCCAATGACTTTGA+GGG | 0.477786 | 7.1:+84275921 | None:intergenic |
| ATAGTACTTTGGGAATTGAA+TGG | 0.486670 | 7.1:+84274622 | None:intergenic |
| GTATTTCTAGGTCGTTCGTC+AGG | 0.487992 | 7.1:-84275764 | MS.gene070621:CDS |
| ATTGAGATTTACCGTAGCTC+AGG | 0.493135 | 7.1:-84275120 | MS.gene070621:CDS |
| CATCACCTTCAACAACCAAT+GGG | 0.500393 | 7.1:+84274537 | None:intergenic |
| ATACTTGCACCATAGCCATC+TGG | 0.500430 | 7.1:+84275783 | None:intergenic |
| ACCAAGTCAACAACTTCCTC+CGG | 0.502797 | 7.1:+84275666 | None:intergenic |
| TGTCAGCTTCAAGGCCCCAT+TGG | 0.503239 | 7.1:-84274552 | MS.gene070621:CDS |
| TGTTCTATAAGAACAATCAA+TGG | 0.505153 | 7.1:-84275698 | MS.gene070621:CDS |
| TTCCTCATCTATCCAACCAA+TGG | 0.510069 | 7.1:+84275527 | None:intergenic |
| GCTGTGGAGGTAGAGTTAAA+TGG | 0.511177 | 7.1:-84275615 | MS.gene070621:CDS |
| AACATGGAGGTTCTTCGTCC+TGG | 0.512301 | 7.1:-84274695 | MS.gene070621:CDS |
| TCCGGAGGAAGTTGTTGACT+TGG | 0.512817 | 7.1:-84275667 | MS.gene070621:CDS |
| GTTTGCAACAACCCATTGGT+TGG | 0.512837 | 7.1:-84275539 | MS.gene070621:CDS |
| AGTGTCCACTGTAGAATTCA+CGG | 0.514486 | 7.1:+84274185 | None:intergenic |
| CAATAATATAAGCGAGCAGA+AGG | 0.519377 | 7.1:-84275457 | MS.gene070621:CDS |
| ATGGCTTGCTTGTTCTAAAG+AGG | 0.523351 | 7.1:-84275010 | MS.gene070621:CDS |
| TTATCATATTCGCAACCACT+TGG | 0.525335 | 7.1:+84274656 | None:intergenic |
| TCCTCATCTATCCAACCAAT+GGG | 0.526393 | 7.1:+84275528 | None:intergenic |
| AAGCAAGCTGATATCACAAA+AGG | 0.527292 | 7.1:-84275063 | MS.gene070621:CDS |
| ACGGGTTTGCAACAACCCAT+TGG | 0.535495 | 7.1:-84275543 | MS.gene070621:CDS |
| GGTAGAGTTAAATGGTCAAG+AGG | 0.540697 | 7.1:-84275607 | MS.gene070621:CDS |
| AGATGTGTTGCAGATTTGAC+TGG | 0.541970 | 7.1:-84275867 | MS.gene070621:CDS |
| ATGCTAATGTTCGCTATGCA+TGG | 0.547147 | 7.1:-84275029 | MS.gene070621:CDS |
| TCTAGTAGATTGAGAATGGA+AGG | 0.550209 | 7.1:-84275948 | None:intergenic |
| ACATCACCTTCAACAACCAA+TGG | 0.550684 | 7.1:+84274536 | None:intergenic |
| ATCACTAACAAAATGGGAGG+TGG | 0.552416 | 7.1:-84275288 | MS.gene070621:CDS |
| CAAGTTAGGAGGGTATAGTT+GGG | 0.554475 | 7.1:-84275355 | MS.gene070621:CDS |
| ACATAAAGTATAAGAATAGT+GGG | 0.554946 | 7.1:-84275737 | MS.gene070621:CDS |
| TAAAAGCTCCAAATTCCCCT+TGG | 0.559666 | 7.1:-84273822 | MS.gene070621:CDS |
| GTCTACAAGAAACATAATAT+GGG | 0.562821 | 7.1:+84273753 | None:intergenic |
| TCAATTCCCAAAGTACTATG+TGG | 0.566592 | 7.1:-84274618 | MS.gene070621:CDS |
| GAAGATGAATCCAAGTTAGG+AGG | 0.566623 | 7.1:-84275366 | MS.gene070621:CDS |
| AAGCCCTCAAAGTCATTGGA+TGG | 0.570523 | 7.1:-84275924 | MS.gene070621:CDS |
| CTATAAGAACAATCAATGGT+TGG | 0.572647 | 7.1:-84275694 | MS.gene070621:CDS |
| ATAATGATGAAATATGGAGT+TGG | 0.589987 | 7.1:-84274979 | MS.gene070621:CDS |
| TCGTGTCATAATGGGGAACA+TGG | 0.593202 | 7.1:-84274711 | MS.gene070621:CDS |
| GCATTAACCTACCTGAGCTA+CGG | 0.593483 | 7.1:+84275109 | None:intergenic |
| GTGGTAGCAGAGACAGTGGT+AGG | 0.593506 | 7.1:+84273847 | None:intergenic |
| ATATCACAAAAGGAGCTAGA+GGG | 0.599611 | 7.1:-84275053 | MS.gene070621:CDS |
| CCTATCCAACAAAATAAATG+TGG | 0.599934 | 7.1:-84275388 | MS.gene070621:CDS |
| AATCAAGAAGGGAGCTGTGG+AGG | 0.602100 | 7.1:-84275628 | MS.gene070621:CDS |
| GATATCACAAAAGGAGCTAG+AGG | 0.603097 | 7.1:-84275054 | MS.gene070621:CDS |
| AGAATAGTGGGATGCCCGAA+CGG | 0.605315 | 7.1:-84275725 | MS.gene070621:CDS |
| TAAAATCAAGAAGGGAGCTG+TGG | 0.605391 | 7.1:-84275631 | MS.gene070621:CDS |
| ACAAGAAACATAATATGGGA+AGG | 0.616073 | 7.1:+84273757 | None:intergenic |
| ATTTGACCCGAAATCATCAC+GGG | 0.617104 | 7.1:+84273610 | None:intergenic |
| AATTTGACCCGAAATCATCA+CGG | 0.619442 | 7.1:+84273609 | None:intergenic |
| GAAAACATTAAGCAAAAGTG+AGG | 0.623615 | 7.1:-84273304 | None:intergenic |
| AATATAAGCGAGCAGAAGGG+TGG | 0.623778 | 7.1:-84275453 | MS.gene070621:CDS |
| TTCTATGTCGTGTCATAATG+GGG | 0.629256 | 7.1:-84274718 | MS.gene070621:CDS |
| ATTGGTTGGATAGATGAGGA+AGG | 0.630808 | 7.1:-84275525 | MS.gene070621:CDS |
| AAGATGAATCCAAGTTAGGA+GGG | 0.633740 | 7.1:-84275365 | MS.gene070621:CDS |
| ACCCATTGGTTGGATAGATG+AGG | 0.634284 | 7.1:-84275529 | MS.gene070621:CDS |
| GGACGAAGTTGATCACTACC+AGG | 0.636279 | 7.1:+84274677 | None:intergenic |
| TTGGTTGGATAGATGAGGAA+GGG | 0.636931 | 7.1:-84275524 | MS.gene070621:CDS |
| TATCACAAAAGGAGCTAGAG+GGG | 0.640476 | 7.1:-84275052 | MS.gene070621:CDS |
| AGATTTACCGTAGCTCAGGT+AGG | 0.644301 | 7.1:-84275116 | MS.gene070621:CDS |
| GCAGATGTATGCAAACCAGA+TGG | 0.645158 | 7.1:-84275798 | MS.gene070621:CDS |
| GTATGCAAACCAGATGGCTA+TGG | 0.647107 | 7.1:-84275792 | MS.gene070621:CDS |
| AACATCACTAACAAAATGGG+AGG | 0.650923 | 7.1:-84275291 | MS.gene070621:CDS |
| TTGCAGAGACAATCAAGTGG+TGG | 0.652238 | 7.1:-84273337 | MS.gene070621:intron |
| AGTGATCAACTTCGTCCAAG+TGG | 0.658081 | 7.1:-84274671 | MS.gene070621:CDS |
| ACTGATGATGTAAAAGCTGA+TGG | 0.663049 | 7.1:-84275318 | MS.gene070621:CDS |
| AACAAACCAGAGATAAGGGT+AGG | 0.668058 | 7.1:+84274894 | None:intergenic |
| TATGGTGGTAGCAGAGACAG+TGG | 0.680999 | 7.1:+84273843 | None:intergenic |
| AATAATATAAGCGAGCAGAA+GGG | 0.681135 | 7.1:-84275456 | MS.gene070621:CDS |
| TAGCTCCGTGAATTCTACAG+TGG | 0.682528 | 7.1:-84274190 | MS.gene070621:CDS |
| TTCTTGCAGAGACAATCAAG+TGG | 0.698321 | 7.1:-84273340 | MS.gene070621:intron |
| TCAATGGTTGGACTATCCGG+AGG | 0.706941 | 7.1:-84275682 | MS.gene070621:CDS |
| TTGCGAATATGATAATGGGG+TGG | 0.713017 | 7.1:-84274648 | MS.gene070621:CDS |
| TGTCATAATGGGGAACATGG+AGG | 0.714062 | 7.1:-84274708 | MS.gene070621:CDS |
| ATCACCTTCAACAACCAATG+GGG | 0.720736 | 7.1:+84274538 | None:intergenic |
| TGGTTGCGAATATGATAATG+GGG | 0.734754 | 7.1:-84274651 | MS.gene070621:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATAATATTCAATTCA+AGG | - | chr7.1:84275690-84275709 | MS.gene070621:CDS | 10.0% |
| !!! | TAATTTGTTATTTATGAAAT+AGG | + | chr7.1:84275566-84275585 | None:intergenic | 10.0% |
| !! | AAAAAAATCAAATAATAGAG+TGG | + | chr7.1:84275202-84275221 | None:intergenic | 15.0% |
| !! | AAAAAATCAAATAATAGAGT+GGG | + | chr7.1:84275201-84275220 | None:intergenic | 15.0% |
| !! | AACCAAAATTGTATTAATAA+AGG | + | chr7.1:84275351-84275370 | None:intergenic | 15.0% |
| !! | TGGAAAAGAAATTAAATATT+TGG | - | chr7.1:84274498-84274517 | MS.gene070621:intron | 15.0% |
| !! | TTTAAAAACGGTAAAAAAAA+TGG | + | chr7.1:84275147-84275166 | None:intergenic | 15.0% |
| !!! | AAAGATTTTAAAATCAAGAA+GGG | - | chr7.1:84273600-84273619 | MS.gene070621:CDS | 15.0% |
| !!! | TACCTTTATTAATACAATTT+TGG | - | chr7.1:84275346-84275365 | MS.gene070621:CDS | 15.0% |
| !!! | TTTTTGTTTTTTGTTTTTAC+AGG | - | chr7.1:84274996-84275015 | MS.gene070621:CDS | 15.0% |
| !! | AACTAATCTAAAAAGAAAGT+GGG | - | chr7.1:84273344-84273363 | MS.gene070621:intron | 20.0% |
| !! | ACATAAAGTATAAGAATAGT+GGG | - | chr7.1:84273502-84273521 | MS.gene070621:intron | 20.0% |
| !! | CGAGGTAAAAAAAAAATTAA+AGG | + | chr7.1:84274735-84274754 | None:intergenic | 20.0% |
| !! | GTAATAAAGCAAAACATTAA+AGG | + | chr7.1:84275329-84275348 | None:intergenic | 20.0% |
| !! | TACATAAAGTATAAGAATAG+TGG | - | chr7.1:84273501-84273520 | MS.gene070621:intron | 20.0% |
| !! | TTGTCAATAATGATGAAATA+TGG | - | chr7.1:84274254-84274273 | MS.gene070621:intron | 20.0% |
| !!! | GAAAGATTTTAAAATCAAGA+AGG | - | chr7.1:84273599-84273618 | MS.gene070621:CDS | 20.0% |
| !!! | GAATTCGTAGATTTTAAAAA+CGG | + | chr7.1:84275159-84275178 | None:intergenic | 20.0% |
| ! | AATAAAGTGAACTGTAAACA+TGG | + | chr7.1:84274468-84274487 | None:intergenic | 25.0% |
| ! | ATAATGATGAAATATGGAGT+TGG | - | chr7.1:84274260-84274279 | MS.gene070621:intron | 25.0% |
| ! | ATGCGATAAACAATTCATAA+TGG | + | chr7.1:84275514-84275533 | None:intergenic | 25.0% |
| ! | CAACTAATCTAAAAAGAAAG+TGG | - | chr7.1:84273343-84273362 | MS.gene070621:intron | 25.0% |
| ! | CATAACATCACTAACAAAAT+GGG | - | chr7.1:84273945-84273964 | MS.gene070621:intron | 25.0% |
| ! | GTCTACAAGAAACATAATAT+GGG | + | chr7.1:84275489-84275508 | None:intergenic | 25.0% |
| ! | TATGCCTCTTAATGTTTAAT+TGG | - | chr7.1:84275875-84275894 | MS.gene070621:CDS | 25.0% |
| ! | TCATAACATCACTAACAAAA+TGG | - | chr7.1:84273944-84273963 | MS.gene070621:intron | 25.0% |
| ! | TGCGATAAACAATTCATAAT+GGG | + | chr7.1:84275513-84275532 | None:intergenic | 25.0% |
| ! | TGTTCTATAAGAACAATCAA+TGG | - | chr7.1:84273541-84273560 | MS.gene070621:intron | 25.0% |
| ! | TTAGATGATTATACTGAATC+TGG | - | chr7.1:84274014-84274033 | MS.gene070621:intron | 25.0% |
| ! | TTTATCTTCCATGAGAAAAA+TGG | - | chr7.1:84275457-84275476 | MS.gene070621:CDS | 25.0% |
| !! | ATATTTATCTGCTACGTTTT+GGG | - | chr7.1:84275240-84275259 | MS.gene070621:CDS | 25.0% |
| !! | TATTCTTAACTTTTGCATTG+TGG | - | chr7.1:84275827-84275846 | MS.gene070621:CDS | 25.0% |
| !!! | ATCTTCCACATTTATTTTGT+TGG | + | chr7.1:84273859-84273878 | None:intergenic | 25.0% |
| !!! | CAACTTCAATTGATTTTGAT+GGG | + | chr7.1:84275794-84275813 | None:intergenic | 25.0% |
| !!! | GTAAGCTTTTTCATTAGTTT+TGG | - | chr7.1:84275077-84275096 | MS.gene070621:CDS | 25.0% |
| !!! | TCAACTTCAATTGATTTTGA+TGG | + | chr7.1:84275795-84275814 | None:intergenic | 25.0% |
| AATAATATAAGCGAGCAGAA+GGG | - | chr7.1:84273783-84273802 | MS.gene070621:CDS | 30.0% | |
| AATCCATATTTGCATTTGGA+TGG | + | chr7.1:84274302-84274321 | None:intergenic | 30.0% | |
| ACAAGAAACATAATATGGGA+AGG | + | chr7.1:84275485-84275504 | None:intergenic | 30.0% | |
| ACCAAATCCATATTTGCATT+TGG | + | chr7.1:84274306-84274325 | None:intergenic | 30.0% | |
| ATATATAACACTAACACACG+AGG | + | chr7.1:84274753-84274772 | None:intergenic | 30.0% | |
| ATGATAACAAACCAGAGATA+AGG | + | chr7.1:84274353-84274372 | None:intergenic | 30.0% | |
| CAAAAACTTCAGGAAAAAAG+TGG | + | chr7.1:84273743-84273762 | None:intergenic | 30.0% | |
| CAAAAGAAGAATCTCATAAG+AGG | + | chr7.1:84275297-84275316 | None:intergenic | 30.0% | |
| CCTATCCAACAAAATAAATG+TGG | - | chr7.1:84273851-84273870 | MS.gene070621:CDS | 30.0% | |
| CGTCTACAAGAAACATAATA+TGG | + | chr7.1:84275490-84275509 | None:intergenic | 30.0% | |
| CTATAAGAACAATCAATGGT+TGG | - | chr7.1:84273545-84273564 | MS.gene070621:intron | 30.0% | |
| GAAGCCAATTAAACATTAAG+AGG | + | chr7.1:84275882-84275901 | None:intergenic | 30.0% | |
| GATTATACTGAATCTGGATA+TGG | - | chr7.1:84274020-84274039 | MS.gene070621:intron | 30.0% | |
| GTATCATGTCGAATTGAAAA+CGG | - | chr7.1:84273677-84273696 | MS.gene070621:intron | 30.0% | |
| TATCATGTCGAATTGAAAAC+GGG | - | chr7.1:84273678-84273697 | MS.gene070621:intron | 30.0% | |
| TCACTTTATTGTGATGTTGA+TGG | - | chr7.1:84274478-84274497 | MS.gene070621:intron | 30.0% | |
| TCATCTTCTATGATTCATCT+TGG | - | chr7.1:84275266-84275285 | MS.gene070621:CDS | 30.0% | |
| TCCAAATGCAAATATGGATT+TGG | - | chr7.1:84274302-84274321 | MS.gene070621:intron | 30.0% | |
| TCTCATGGAAGATAAAAGAA+TGG | + | chr7.1:84275453-84275472 | None:intergenic | 30.0% | |
| TGAATCTGGATATGGAAAAT+TGG | - | chr7.1:84274028-84274047 | MS.gene070621:intron | 30.0% | |
| TGATAACAAACCAGAGATAA+GGG | + | chr7.1:84274352-84274371 | None:intergenic | 30.0% | |
| TTCTGCTCGCTTATATTATT+GGG | + | chr7.1:84273783-84273802 | None:intergenic | 30.0% | |
| ! | ATAGTACTTTGGGAATTGAA+TGG | + | chr7.1:84274620-84274639 | None:intergenic | 30.0% |
| ! | CATATTTATCTGCTACGTTT+TGG | - | chr7.1:84275239-84275258 | MS.gene070621:CDS | 30.0% |
| ! | CTCTTATGAGATTCTTCTTT+TGG | - | chr7.1:84275295-84275314 | MS.gene070621:CDS | 30.0% |
| !! | TTTATGAAATAGGCATCGAT+TGG | + | chr7.1:84275556-84275575 | None:intergenic | 30.0% |
| !! | TTTGGTTTGTGAAATACCTT+AGG | - | chr7.1:84275364-84275383 | MS.gene070621:CDS | 30.0% |
| !!! | CCACATTTATTTTGTTGGAT+AGG | + | chr7.1:84273854-84273873 | None:intergenic | 30.0% |
| !!! | TTTTTTCCTGAAGTTTTTGC+TGG | - | chr7.1:84273744-84273763 | MS.gene070621:intron | 30.0% |
| AACATCACTAACAAAATGGG+AGG | - | chr7.1:84273948-84273967 | MS.gene070621:intron | 35.0% | |
| AAGATGAATCCAAGTTAGGA+GGG | - | chr7.1:84273874-84273893 | MS.gene070621:intron | 35.0% | |
| AAGATTTCCCGTGATGATTT+CGG | - | chr7.1:84275622-84275641 | MS.gene070621:CDS | 35.0% | |
| AAGCAAGCTGATATCACAAA+AGG | - | chr7.1:84274176-84274195 | MS.gene070621:intron | 35.0% | |
| AATGGAAAAATGAAGCCAAG+GGG | + | chr7.1:84275435-84275454 | None:intergenic | 35.0% | |
| AATTTGACCCGAAATCATCA+CGG | + | chr7.1:84275633-84275652 | None:intergenic | 35.0% | |
| AGAATGGAAAAATGAAGCCA+AGG | + | chr7.1:84275437-84275456 | None:intergenic | 35.0% | |
| AGTGGTTGCGAATATGATAA+TGG | - | chr7.1:84274586-84274605 | MS.gene070621:CDS | 35.0% | |
| ATATCACAAAAGGAGCTAGA+GGG | - | chr7.1:84274186-84274205 | MS.gene070621:CDS | 35.0% | |
| CAATAATATAAGCGAGCAGA+AGG | - | chr7.1:84273782-84273801 | MS.gene070621:CDS | 35.0% | |
| CTTATAGAACATCAACCGTT+CGG | + | chr7.1:84273532-84273551 | None:intergenic | 35.0% | |
| CTTCTGCTCGCTTATATTAT+TGG | + | chr7.1:84273784-84273803 | None:intergenic | 35.0% | |
| GAATGGAAAAATGAAGCCAA+GGG | + | chr7.1:84275436-84275455 | None:intergenic | 35.0% | |
| GTGGTTGCGAATATGATAAT+GGG | - | chr7.1:84274587-84274606 | MS.gene070621:CDS | 35.0% | |
| GTTCTATGTCGTGTCATAAT+GGG | - | chr7.1:84274520-84274539 | MS.gene070621:intron | 35.0% | |
| TCCAAACCACATAGTACTTT+GGG | + | chr7.1:84274630-84274649 | None:intergenic | 35.0% | |
| TCTCCATCCAAATGCAAATA+TGG | - | chr7.1:84274296-84274315 | MS.gene070621:intron | 35.0% | |
| TGCAATCAATCTCGTTTGTT+TGG | + | chr7.1:84273424-84273443 | None:intergenic | 35.0% | |
| TTATAGAACATCAACCGTTC+GGG | + | chr7.1:84273531-84273550 | None:intergenic | 35.0% | |
| TTATCATATTCGCAACCACT+TGG | + | chr7.1:84274586-84274605 | None:intergenic | 35.0% | |
| TTCCAAACCACATAGTACTT+TGG | + | chr7.1:84274631-84274650 | None:intergenic | 35.0% | |
| TTCGTCATATTAGAGTGAAG+CGG | + | chr7.1:84274891-84274910 | None:intergenic | 35.0% | |
| TTCTATGTCGTGTCATAATG+GGG | - | chr7.1:84274521-84274540 | MS.gene070621:intron | 35.0% | |
| TTGAAGCTGACAACAAATTC+TGG | + | chr7.1:84274679-84274698 | None:intergenic | 35.0% | |
| ! | ACTGATGATGTAAAAGCTGA+TGG | - | chr7.1:84273921-84273940 | MS.gene070621:intron | 35.0% |
| ! | ATGATTTCGGGTCAAATTTG+AGG | - | chr7.1:84275635-84275654 | MS.gene070621:CDS | 35.0% |
| ! | TCAAATTTGAGGTCGATTGT+TGG | - | chr7.1:84275646-84275665 | MS.gene070621:CDS | 35.0% |
| ! | TCAATTCCCAAAGTACTATG+TGG | - | chr7.1:84274621-84274640 | MS.gene070621:CDS | 35.0% |
| ! | TGGTTGCGAATATGATAATG+GGG | - | chr7.1:84274588-84274607 | MS.gene070621:CDS | 35.0% |
| !! | AGAATTTGTTGTCAGCTTCA+AGG | - | chr7.1:84274678-84274697 | MS.gene070621:CDS | 35.0% |
| !! | CTTCAATTGATTTTGATGGG+AGG | + | chr7.1:84275791-84275810 | None:intergenic | 35.0% |
| AAAATGGGAGGTGGAAAAGT+TGG | - | chr7.1:84273960-84273979 | MS.gene070621:intron | 40.0% | |
| AAATGAAGCCAAGGGGAATT+TGG | + | chr7.1:84275428-84275447 | None:intergenic | 40.0% | |
| AACAAACCAGAGATAAGGGT+AGG | + | chr7.1:84274348-84274367 | None:intergenic | 40.0% | |
| ACATCACCTTCAACAACCAA+TGG | + | chr7.1:84274706-84274725 | None:intergenic | 40.0% | |
| AGATGTGTTGCAGATTTGAC+TGG | - | chr7.1:84273372-84273391 | MS.gene070621:intron | 40.0% | |
| AGATTTCCCGTGATGATTTC+GGG | - | chr7.1:84275623-84275642 | MS.gene070621:CDS | 40.0% | |
| AGTGTCCACTGTAGAATTCA+CGG | + | chr7.1:84275057-84275076 | None:intergenic | 40.0% | |
| ATCACCTTCAACAACCAATG+GGG | + | chr7.1:84274704-84274723 | None:intergenic | 40.0% | |
| ATCACTAACAAAATGGGAGG+TGG | - | chr7.1:84273951-84273970 | MS.gene070621:intron | 40.0% | |
| ATGCTAATGTTCGCTATGCA+TGG | - | chr7.1:84274210-84274229 | MS.gene070621:CDS | 40.0% | |
| ATTGAGATTTACCGTAGCTC+AGG | - | chr7.1:84274119-84274138 | MS.gene070621:intron | 40.0% | |
| ATTGGTTGGATAGATGAGGA+AGG | - | chr7.1:84273714-84273733 | MS.gene070621:intron | 40.0% | |
| ATTTGACCCGAAATCATCAC+GGG | + | chr7.1:84275632-84275651 | None:intergenic | 40.0% | |
| CAATCAATGGTTGGACTATC+CGG | - | chr7.1:84273554-84273573 | MS.gene070621:CDS | 40.0% | |
| CATCACCTTCAACAACCAAT+GGG | + | chr7.1:84274705-84274724 | None:intergenic | 40.0% | |
| CTTACAGGAATGACTGCTTT+GGG | - | chr7.1:84274077-84274096 | MS.gene070621:intron | 40.0% | |
| GAAGATGAATCCAAGTTAGG+AGG | - | chr7.1:84273873-84273892 | MS.gene070621:intron | 40.0% | |
| GATATCACAAAAGGAGCTAG+AGG | - | chr7.1:84274185-84274204 | MS.gene070621:CDS | 40.0% | |
| GCTATGGTGCAAGTATTTCT+AGG | - | chr7.1:84273463-84273482 | MS.gene070621:intron | 40.0% | |
| GGTAGAGTTAAATGGTCAAG+AGG | - | chr7.1:84273632-84273651 | MS.gene070621:intron | 40.0% | |
| GGTTCTATGTCGTGTCATAA+TGG | - | chr7.1:84274519-84274538 | MS.gene070621:intron | 40.0% | |
| GTAGAACCAGCAAAAACTTC+AGG | + | chr7.1:84273753-84273772 | None:intergenic | 40.0% | |
| GTGGAAGATGAATCCAAGTT+AGG | - | chr7.1:84273870-84273889 | MS.gene070621:intron | 40.0% | |
| TAAAAGCTCCAAATTCCCCT+TGG | - | chr7.1:84275417-84275436 | MS.gene070621:CDS | 40.0% | |
| TAAAATCAAGAAGGGAGCTG+TGG | - | chr7.1:84273608-84273627 | MS.gene070621:CDS | 40.0% | |
| TATCACAAAAGGAGCTAGAG+GGG | - | chr7.1:84274187-84274206 | MS.gene070621:CDS | 40.0% | |
| TCCTCATCTATCCAACCAAT+GGG | + | chr7.1:84273714-84273733 | None:intergenic | 40.0% | |
| TCTTACAGGAATGACTGCTT+TGG | - | chr7.1:84274076-84274095 | MS.gene070621:intron | 40.0% | |
| TTCCTCATCTATCCAACCAA+TGG | + | chr7.1:84273715-84273734 | None:intergenic | 40.0% | |
| TTCTTGCAGAGACAATCAAG+TGG | - | chr7.1:84275899-84275918 | MS.gene070621:CDS | 40.0% | |
| TTGGTTGGATAGATGAGGAA+GGG | - | chr7.1:84273715-84273734 | MS.gene070621:intron | 40.0% | |
| ! | CAAGTTAGGAGGGTATAGTT+GGG | - | chr7.1:84273884-84273903 | MS.gene070621:intron | 40.0% |
| ! | TCCCAAAGTACTATGTGGTT+TGG | - | chr7.1:84274626-84274645 | MS.gene070621:CDS | 40.0% |
| ! | TTGATGGGAGGTATAAAGAC+AGG | + | chr7.1:84275779-84275798 | None:intergenic | 40.0% |
| ! | TTGTGATATCAGCTTGCTTC+TGG | + | chr7.1:84274175-84274194 | None:intergenic | 40.0% |
| !! | AGGGGAATTTGGAGCTTTTA+TGG | + | chr7.1:84275417-84275436 | None:intergenic | 40.0% |
| !! | ATGGCTTGCTTGTTCTAAAG+AGG | - | chr7.1:84274229-84274248 | MS.gene070621:intron | 40.0% |
| !! | GCACAGAAGTTGTTTCTTAC+AGG | - | chr7.1:84274062-84274081 | MS.gene070621:intron | 40.0% |
| !! | GGAAGGAACCATTTTTCTCA+TGG | + | chr7.1:84275468-84275487 | None:intergenic | 40.0% |
| !! | GGAATTTGGAGCTTTTATGG+TGG | + | chr7.1:84275414-84275433 | None:intergenic | 40.0% |
| !! | TTGCGAATATGATAATGGGG+TGG | - | chr7.1:84274591-84274610 | MS.gene070621:CDS | 40.0% |
| AAGCCCTCAAAGTCATTGGA+TGG | - | chr7.1:84273315-84273334 | MS.gene070621:CDS | 45.0% | |
| AATATAAGCGAGCAGAAGGG+TGG | - | chr7.1:84273786-84273805 | MS.gene070621:CDS | 45.0% | |
| ACCAAGTCAACAACTTCCTC+CGG | + | chr7.1:84273576-84273595 | None:intergenic | 45.0% | |
| AGATTTACCGTAGCTCAGGT+AGG | - | chr7.1:84274123-84274142 | MS.gene070621:intron | 45.0% | |
| AGCTCCATCCAATGACTTTG+AGG | + | chr7.1:84273322-84273341 | None:intergenic | 45.0% | |
| AGGAAAGCCCTCAAAGTCAT+TGG | - | chr7.1:84273311-84273330 | MS.gene070621:CDS | 45.0% | |
| AGTGATCAACTTCGTCCAAG+TGG | - | chr7.1:84274568-84274587 | MS.gene070621:CDS | 45.0% | |
| ATACTTGCACCATAGCCATC+TGG | + | chr7.1:84273459-84273478 | None:intergenic | 45.0% | |
| CCAACTATACCCTCCTAACT+TGG | + | chr7.1:84273886-84273905 | None:intergenic | 45.0% | |
| CTGTTACCTACCCTTATCTC+TGG | - | chr7.1:84274339-84274358 | MS.gene070621:intron | 45.0% | |
| GCAGATGTATGCAAACCAGA+TGG | - | chr7.1:84273441-84273460 | MS.gene070621:intron | 45.0% | |
| GCATTAACCTACCTGAGCTA+CGG | + | chr7.1:84274133-84274152 | None:intergenic | 45.0% | |
| GCTCCATCCAATGACTTTGA+GGG | + | chr7.1:84273321-84273340 | None:intergenic | 45.0% | |
| GCTGTGGAGGTAGAGTTAAA+TGG | - | chr7.1:84273624-84273643 | MS.gene070621:CDS | 45.0% | |
| GTATGCAAACCAGATGGCTA+TGG | - | chr7.1:84273447-84273466 | MS.gene070621:intron | 45.0% | |
| GTTTGCAACAACCCATTGGT+TGG | - | chr7.1:84273700-84273719 | MS.gene070621:intron | 45.0% | |
| TAGCTCCGTGAATTCTACAG+TGG | - | chr7.1:84275049-84275068 | MS.gene070621:CDS | 45.0% | |
| TTGCAGAGACAATCAAGTGG+TGG | - | chr7.1:84275902-84275921 | MS.gene070621:CDS | 45.0% | |
| ! | ACAGTGGTAGGTTTTGCCTA+AGG | + | chr7.1:84275383-84275402 | None:intergenic | 45.0% |
| ! | ACCCATTGGTTGGATAGATG+AGG | - | chr7.1:84273710-84273729 | MS.gene070621:intron | 45.0% |
| ! | CCAAGTTAGGAGGGTATAGT+TGG | - | chr7.1:84273883-84273902 | MS.gene070621:intron | 45.0% |
| ! | TCGTGTCATAATGGGGAACA+TGG | - | chr7.1:84274528-84274547 | MS.gene070621:intron | 45.0% |
| ! | TGTCATAATGGGGAACATGG+AGG | - | chr7.1:84274531-84274550 | MS.gene070621:intron | 45.0% |
| !! | CAATCAAGTGGTGGATCAGA+TGG | - | chr7.1:84275911-84275930 | MS.gene070621:CDS | 45.0% |
| !! | GTATTTCTAGGTCGTTCGTC+AGG | - | chr7.1:84273475-84273494 | MS.gene070621:intron | 45.0% |
| !! | AATATGTTAAAAAAATAAAA+AGG | + | chr7.1:84275225-84275244 | None:intergenic | 5.0% |
| AACATGGAGGTTCTTCGTCC+TGG | - | chr7.1:84274544-84274563 | MS.gene070621:CDS | 50.0% | |
| AATCAAGAAGGGAGCTGTGG+AGG | - | chr7.1:84273611-84273630 | MS.gene070621:CDS | 50.0% | |
| ACGGGTTTGCAACAACCCAT+TGG | - | chr7.1:84273696-84273715 | MS.gene070621:intron | 50.0% | |
| TATGGTGGTAGCAGAGACAG+TGG | + | chr7.1:84275399-84275418 | None:intergenic | 50.0% | |
| TCAATGGTTGGACTATCCGG+AGG | - | chr7.1:84273557-84273576 | MS.gene070621:CDS | 50.0% | |
| TGTTTGGCAACCACGCTTGT+CGG | + | chr7.1:84273408-84273427 | None:intergenic | 50.0% | |
| ! | AAGGCCCCATTGGTTGTTGA+AGG | - | chr7.1:84274697-84274716 | MS.gene070621:CDS | 50.0% |
| ! | AGAATAGTGGGATGCCCGAA+CGG | - | chr7.1:84273514-84273533 | MS.gene070621:intron | 50.0% |
| ! | GGACGAAGTTGATCACTACC+AGG | + | chr7.1:84274565-84274584 | None:intergenic | 50.0% |
| ! | TCCGGAGGAAGTTGTTGACT+TGG | - | chr7.1:84273572-84273591 | MS.gene070621:CDS | 50.0% |
| !! | AGTTTTGACACCGACAAGCG+TGG | - | chr7.1:84273395-84273414 | MS.gene070621:intron | 50.0% |
| GTGGTAGCAGAGACAGTGGT+AGG | + | chr7.1:84275395-84275414 | None:intergenic | 55.0% | |
| TGTCAGCTTCAAGGCCCCAT+TGG | - | chr7.1:84274687-84274706 | MS.gene070621:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 84273306 | 84275955 | 84273306 | ID=MS.gene070621 |
| chr7.1 | mRNA | 84273306 | 84275955 | 84273306 | ID=MS.gene070621.t1;Parent=MS.gene070621 |
| chr7.1 | exon | 84274901 | 84275955 | 84274901 | ID=MS.gene070621.t1.exon1;Parent=MS.gene070621.t1 |
| chr7.1 | CDS | 84274901 | 84275955 | 84274901 | ID=cds.MS.gene070621.t1;Parent=MS.gene070621.t1 |
| chr7.1 | exon | 84274543 | 84274784 | 84274543 | ID=MS.gene070621.t1.exon2;Parent=MS.gene070621.t1 |
| chr7.1 | CDS | 84274543 | 84274784 | 84274543 | ID=cds.MS.gene070621.t1;Parent=MS.gene070621.t1 |
| chr7.1 | exon | 84274185 | 84274243 | 84274185 | ID=MS.gene070621.t1.exon3;Parent=MS.gene070621.t1 |
| chr7.1 | CDS | 84274185 | 84274243 | 84274185 | ID=cds.MS.gene070621.t1;Parent=MS.gene070621.t1 |
| chr7.1 | exon | 84273759 | 84273875 | 84273759 | ID=MS.gene070621.t1.exon4;Parent=MS.gene070621.t1 |
| chr7.1 | CDS | 84273759 | 84273875 | 84273759 | ID=cds.MS.gene070621.t1;Parent=MS.gene070621.t1 |
| chr7.1 | exon | 84273550 | 84273645 | 84273550 | ID=MS.gene070621.t1.exon5;Parent=MS.gene070621.t1 |
| chr7.1 | CDS | 84273550 | 84273645 | 84273550 | ID=cds.MS.gene070621.t1;Parent=MS.gene070621.t1 |
| chr7.1 | exon | 84273306 | 84273353 | 84273306 | ID=MS.gene070621.t1.exon6;Parent=MS.gene070621.t1 |
| chr7.1 | CDS | 84273306 | 84273353 | 84273306 | ID=cds.MS.gene070621.t1;Parent=MS.gene070621.t1 |
| Gene Sequence |
| Protein sequence |
