Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79552.t1 | XP_003621296.1 | 65.8 | 547 | 178 | 1 | 1 | 538 | 1 | 547 | 2.20E-199 | 705.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79552.t1 | Q8RY59 | 35.5 | 578 | 315 | 13 | 1 | 526 | 1 | 572 | 1.4e-82 | 308.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79552.t1 | A2Q3R6 | 65.8 | 547 | 178 | 1 | 1 | 538 | 1 | 547 | 1.6e-199 | 705.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene79552 | MS.gene74956 | PPI |
| MS.gene79552 | MS.gene069103 | PPI |
| MS.gene79552 | MS.gene029308 | PPI |
| MS.gene79552 | MS.gene046409 | PPI |
| MS.gene79552 | MS.gene032270 | PPI |
| MS.gene79552 | MS.gene070621 | PPI |
| MS.gene007901 | MS.gene79552 | PPI |
| MS.gene79552 | MS.gene065039 | PPI |
| MS.gene79552 | MS.gene001066 | PPI |
| MS.gene79552 | MS.gene021778 | PPI |
| MS.gene79552 | MS.gene046455 | PPI |
| MS.gene79552 | MS.gene76207 | PPI |
| MS.gene046444 | MS.gene79552 | PPI |
| MS.gene36039 | MS.gene79552 | PPI |
| MS.gene79552 | MS.gene070678 | PPI |
| MS.gene79552 | MS.gene046444 | PPI |
| MS.gene79552 | MS.gene36039 | PPI |
| MS.gene79552 | MS.gene057563 | PPI |
| MS.gene79552 | MS.gene027783 | PPI |
| MS.gene79552 | MS.gene007901 | PPI |
| MS.gene34237 | MS.gene79552 | PPI |
| MS.gene79552 | MS.gene34237 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79552.t1 | MTR_7g011550 | 65.814 | 547 | 178 | 1 | 1 | 538 | 1 | 547 | 0.0 | 731 |
| MS.gene79552.t1 | MTR_1g112330 | 47.452 | 569 | 254 | 10 | 1 | 527 | 1 | 566 | 2.43e-163 | 476 |
| MS.gene79552.t1 | MTR_1g112330 | 46.701 | 576 | 251 | 9 | 1 | 527 | 1 | 569 | 4.05e-163 | 476 |
| MS.gene79552.t1 | MTR_5g032190 | 43.838 | 568 | 265 | 9 | 1 | 523 | 1 | 559 | 6.58e-156 | 457 |
| MS.gene79552.t1 | MTR_1g112330 | 51.092 | 458 | 196 | 6 | 1 | 433 | 1 | 455 | 7.34e-149 | 435 |
| MS.gene79552.t1 | MTR_5g032190 | 46.998 | 483 | 230 | 6 | 1 | 462 | 1 | 478 | 6.30e-145 | 426 |
| MS.gene79552.t1 | MTR_5g032190 | 47.579 | 475 | 223 | 6 | 1 | 454 | 1 | 470 | 1.32e-144 | 425 |
| MS.gene79552.t1 | MTR_5g029580 | 54.925 | 335 | 134 | 4 | 203 | 524 | 19 | 349 | 3.30e-121 | 361 |
| MS.gene79552.t1 | MTR_2g090130 | 42.534 | 221 | 88 | 2 | 187 | 403 | 32 | 217 | 1.00e-42 | 152 |
| MS.gene79552.t1 | MTR_2g090130 | 44.667 | 150 | 36 | 2 | 1 | 150 | 1 | 103 | 1.14e-29 | 116 |
| MS.gene79552.t1 | MTR_7g011640 | 62.931 | 116 | 26 | 1 | 90 | 205 | 15 | 113 | 2.08e-38 | 138 |
| MS.gene79552.t1 | MTR_7g011880 | 48.611 | 144 | 47 | 3 | 351 | 491 | 53 | 172 | 4.96e-33 | 125 |
| MS.gene79552.t1 | MTR_4g105740 | 29.893 | 281 | 154 | 8 | 257 | 524 | 54 | 304 | 1.58e-32 | 127 |
| MS.gene79552.t1 | MTR_4g105740 | 30.000 | 280 | 153 | 8 | 257 | 523 | 54 | 303 | 2.28e-32 | 126 |
| MS.gene79552.t1 | MTR_3g077870 | 29.123 | 285 | 149 | 8 | 257 | 525 | 67 | 314 | 1.55e-26 | 110 |
| MS.gene79552.t1 | MTR_8g088250 | 29.412 | 272 | 165 | 8 | 254 | 517 | 27 | 279 | 2.77e-25 | 106 |
| MS.gene79552.t1 | MTR_7g061850 | 52.041 | 98 | 47 | 0 | 213 | 310 | 26 | 123 | 5.02e-25 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79552.t1 | AT1G32230 | 36.063 | 574 | 306 | 14 | 1 | 521 | 1 | 566 | 1.11e-102 | 320 |
| MS.gene79552.t1 | AT1G32230 | 35.924 | 579 | 310 | 14 | 1 | 526 | 1 | 571 | 1.84e-102 | 320 |
| MS.gene79552.t1 | AT1G32230 | 35.924 | 579 | 310 | 14 | 1 | 526 | 1 | 571 | 1.84e-102 | 320 |
| MS.gene79552.t1 | AT1G32230 | 35.924 | 579 | 310 | 14 | 1 | 526 | 1 | 571 | 1.84e-102 | 320 |
| MS.gene79552.t1 | AT1G32230 | 35.924 | 579 | 310 | 14 | 1 | 526 | 1 | 571 | 1.84e-102 | 320 |
| MS.gene79552.t1 | AT1G32230 | 35.467 | 578 | 315 | 13 | 1 | 526 | 1 | 572 | 4.17e-102 | 320 |
| MS.gene79552.t1 | AT2G35510 | 36.735 | 539 | 293 | 14 | 23 | 521 | 34 | 564 | 1.54e-93 | 296 |
| MS.gene79552.t1 | AT2G35510 | 36.735 | 539 | 293 | 14 | 23 | 521 | 34 | 564 | 1.54e-93 | 296 |
| MS.gene79552.t1 | AT2G35510 | 39.905 | 421 | 225 | 9 | 23 | 426 | 34 | 443 | 1.32e-90 | 286 |
| MS.gene79552.t1 | AT1G23550 | 31.271 | 291 | 148 | 10 | 249 | 519 | 56 | 314 | 1.29e-34 | 133 |
| MS.gene79552.t1 | AT1G70440 | 29.433 | 282 | 147 | 6 | 257 | 519 | 54 | 302 | 8.42e-31 | 122 |
| MS.gene79552.t1 | AT1G70440 | 29.433 | 282 | 147 | 6 | 257 | 519 | 54 | 302 | 8.42e-31 | 122 |
| MS.gene79552.t1 | AT5G62520 | 30.712 | 267 | 136 | 8 | 268 | 517 | 66 | 300 | 3.82e-30 | 120 |
| MS.gene79552.t1 | AT5G62520 | 35.294 | 170 | 98 | 4 | 268 | 429 | 66 | 231 | 3.10e-25 | 104 |
| MS.gene79552.t1 | AT3G47720 | 27.089 | 347 | 191 | 13 | 187 | 520 | 11 | 308 | 1.79e-23 | 101 |
Find 127 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCTATCCAACAAAATAAA+TGG | 0.142572 | 7.3:-86853471 | MS.gene79552:CDS |
| TGGAAAAGAAATTAAATATT+TGG | 0.151924 | 7.3:-86852822 | MS.gene79552:CDS |
| CTTCTGCTCGCTTATATTAT+TGG | 0.183427 | 7.3:+86853539 | None:intergenic |
| TTGTGATATCAGCTTGCTTC+TGG | 0.216854 | 7.3:+86853148 | None:intergenic |
| TCATAACATCACTAACAAAA+TGG | 0.222623 | 7.3:-86853376 | MS.gene79552:CDS |
| GCACAGAAGTTGTTTCTTAC+AGG | 0.226200 | 7.3:-86853258 | MS.gene79552:CDS |
| AAGATTTCCCGTGATGATTT+CGG | 0.234117 | 7.3:-86851697 | MS.gene79552:CDS |
| AGATTTCCCGTGATGATTTC+GGG | 0.234848 | 7.3:-86851696 | MS.gene79552:CDS |
| CGTCTACAAGAAACATAATA+TGG | 0.249315 | 7.3:+86851832 | None:intergenic |
| TTCTGCTCGCTTATATTATT+GGG | 0.260928 | 7.3:+86853540 | None:intergenic |
| AAATGAAGCCAAGGGGAATT+TGG | 0.267347 | 7.3:+86851894 | None:intergenic |
| TCTCCATCCAAATGCAAATA+TGG | 0.289194 | 7.3:-86853024 | MS.gene79552:CDS |
| TTAGATGATTATACTGAATC+TGG | 0.296296 | 7.3:-86853306 | MS.gene79552:CDS |
| TGAATCTGGATATGGAAAAT+TGG | 0.304135 | 7.3:-86853292 | MS.gene79552:CDS |
| GGTTCTATGTCGTGTCATAA+TGG | 0.312868 | 7.3:-86852801 | MS.gene79552:CDS |
| TTGTCAATAATGATGAAATA+TGG | 0.324794 | 7.3:-86853066 | MS.gene79552:CDS |
| GTTCTATGTCGTGTCATAAT+GGG | 0.327778 | 7.3:-86852800 | MS.gene79552:CDS |
| TCCAATCAATCTCGTTTGTT+TGG | 0.329869 | 7.3:+86853899 | None:intergenic |
| TTGAAGCTGACAACAAATTC+TGG | 0.332140 | 7.3:+86852644 | None:intergenic |
| TCCAAATGCAAATATGGATT+TGG | 0.337120 | 7.3:-86853018 | MS.gene79552:CDS |
| GATTATACTGAATCTGGATA+TGG | 0.340358 | 7.3:-86853300 | MS.gene79552:CDS |
| ACCAAATCCATATTTGCATT+TGG | 0.340512 | 7.3:+86853017 | None:intergenic |
| ACCTATCCAACAAAATAAAT+GGG | 0.350234 | 7.3:-86853470 | MS.gene79552:CDS |
| TCACTTTATTGTGATGTTGA+TGG | 0.354266 | 7.3:-86852842 | MS.gene79552:CDS |
| AGTGGTTGCGAATATGATAA+TGG | 0.357908 | 7.3:-86852734 | MS.gene79552:CDS |
| CTTACAGGAATGACTGCTTT+GGG | 0.373340 | 7.3:-86853243 | MS.gene79552:CDS |
| TCCCAAAGTACTATGTGGTT+TGG | 0.380192 | 7.3:-86852694 | MS.gene79552:CDS |
| TCCAAACCACATAGTACTTT+GGG | 0.384520 | 7.3:+86852693 | None:intergenic |
| CTGTTACCTACCCTTATCTC+TGG | 0.397068 | 7.3:-86852981 | MS.gene79552:intron |
| TTCCAAACCACATAGTACTT+TGG | 0.400302 | 7.3:+86852692 | None:intergenic |
| TCTTACAGGAATGACTGCTT+TGG | 0.410682 | 7.3:-86853244 | MS.gene79552:CDS |
| TACATAAAGTATAAGAATAG+TGG | 0.413018 | 7.3:-86853819 | MS.gene79552:CDS |
| GCTATGGTGCAAGTATTTCT+AGG | 0.418377 | 7.3:-86853857 | MS.gene79552:CDS |
| CAATCAATGGTTGGACTATC+CGG | 0.418964 | 7.3:-86853766 | MS.gene79552:CDS |
| GCCAAACAAACGAGATTGAT+TGG | 0.421566 | 7.3:-86853900 | MS.gene79552:CDS |
| GGGGAAGATGAATCCAAGTT+AGG | 0.425045 | 7.3:-86853450 | MS.gene79552:CDS |
| TATATATAATATTCAATTCA+AGG | 0.427606 | 7.3:-86851629 | MS.gene79552:intron |
| AAGGCTCCATTGGTTGTTGA+AGG | 0.429240 | 7.3:-86852623 | MS.gene79552:intron |
| TTATAGAACATCAACCGTTC+GGG | 0.434228 | 7.3:+86853792 | None:intergenic |
| AGAATTTGTTGTCAGCTTCA+AGG | 0.436311 | 7.3:-86852642 | MS.gene79552:CDS |
| AATCCATATTTGCATTTGGA+TGG | 0.436634 | 7.3:+86853021 | None:intergenic |
| CTTATAGAACATCAACCGTT+CGG | 0.438943 | 7.3:+86853791 | None:intergenic |
| TCAAATTTGAGGTCGATTGT+TGG | 0.451705 | 7.3:-86851673 | MS.gene79552:CDS |
| GTATCATGTCGAATTGAAAA+CGG | 0.452724 | 7.3:-86853643 | MS.gene79552:CDS |
| TGATAACAAACCAGAGATAA+GGG | 0.452916 | 7.3:+86852971 | None:intergenic |
| CATAACATCACTAACAAAAT+GGG | 0.454583 | 7.3:-86853375 | MS.gene79552:CDS |
| AAAATGGGAGGTGGAAAAGT+TGG | 0.456037 | 7.3:-86853360 | MS.gene79552:CDS |
| AGGAAAGCCCTCAAAGTCAT+TGG | 0.458603 | 7.3:-86854009 | MS.gene79552:CDS |
| AGCTCCATCCAATGACTTTG+AGG | 0.461041 | 7.3:+86854001 | None:intergenic |
| TATCATGTCGAATTGAAAAC+GGG | 0.461703 | 7.3:-86853642 | MS.gene79552:CDS |
| ATGATAACAAACCAGAGATA+AGG | 0.463760 | 7.3:+86852970 | None:intergenic |
| TGTCAGCTTCAAGGCTCCAT+TGG | 0.466003 | 7.3:-86852633 | MS.gene79552:CDS |
| GTGGTTGCGAATATGATAAT+GGG | 0.467591 | 7.3:-86852733 | MS.gene79552:CDS |
| ATGATTTCGGGTCAAATTTG+AGG | 0.471755 | 7.3:-86851684 | MS.gene79552:CDS |
| CAATCAAGTGGTGGATCAGA+TGG | 0.472471 | 7.3:-86851408 | MS.gene79552:CDS |
| TCTCATGGAAGATAAAAGAA+TGG | 0.476779 | 7.3:+86851869 | None:intergenic |
| GCTCCATCCAATGACTTTGA+GGG | 0.477786 | 7.3:+86854002 | None:intergenic |
| TGTTTGGCAACCACACTTGT+CGG | 0.478458 | 7.3:+86853915 | None:intergenic |
| GTATTTCTAGGTCGTTCGTC+AGG | 0.487992 | 7.3:-86853845 | MS.gene79552:CDS |
| ATTGAGATTTACCGTAGCTC+AGG | 0.493135 | 7.3:-86853201 | MS.gene79552:CDS |
| GGGAAGATGAATCCAAGTTA+GGG | 0.494487 | 7.3:-86853449 | MS.gene79552:CDS |
| AACATGGAGCTTCTTCGTCC+TGG | 0.498662 | 7.3:-86852776 | MS.gene79552:CDS |
| ATACTTGCACCATAGCCATC+TGG | 0.500430 | 7.3:+86853864 | None:intergenic |
| ACCAAGTCAACAACTTCCTC+CGG | 0.502797 | 7.3:+86853747 | None:intergenic |
| TGTTCTATAAGAACAATCAA+TGG | 0.505153 | 7.3:-86853779 | MS.gene79552:CDS |
| TTCCTCATCTATCCAACCAA+TGG | 0.510069 | 7.3:+86853608 | None:intergenic |
| TCCGGAGGAAGTTGTTGACT+TGG | 0.512817 | 7.3:-86853748 | MS.gene79552:CDS |
| GTTTGCAACAACCCATTGGT+TGG | 0.512837 | 7.3:-86853620 | MS.gene79552:CDS |
| GCTGTGGAGGTAGAGTTAAA+TGG | 0.513139 | 7.3:-86853696 | MS.gene79552:CDS |
| AGTGTCCACTGTAGAATTCA+CGG | 0.514486 | 7.3:+86852266 | None:intergenic |
| CAATAATATAAGCGAGCAGA+AGG | 0.519377 | 7.3:-86853538 | MS.gene79552:CDS |
| ATGGCTTGCTTGTTCTAAAG+AGG | 0.523351 | 7.3:-86853091 | MS.gene79552:CDS |
| TTATCATATTCGCAACCACT+TGG | 0.525335 | 7.3:+86852737 | None:intergenic |
| TCCTCATCTATCCAACCAAT+GGG | 0.526393 | 7.3:+86853609 | None:intergenic |
| AAGCAAGCTGATATCACAAA+AGG | 0.527292 | 7.3:-86853144 | MS.gene79552:CDS |
| ACGGGTTTGCAACAACCCAT+TGG | 0.535495 | 7.3:-86853624 | MS.gene79552:CDS |
| AGATGTGTTGCAGATTTGAC+TGG | 0.541970 | 7.3:-86853948 | MS.gene79552:CDS |
| ATGCTAATGTTCGCTATGCA+TGG | 0.547147 | 7.3:-86853110 | MS.gene79552:CDS |
| TCTAGTAGATTGAGAATGGA+AGG | 0.550209 | 7.3:-86854029 | None:intergenic |
| ATCACTAACAAAATGGGAGG+TGG | 0.552416 | 7.3:-86853369 | MS.gene79552:CDS |
| ACATAAAGTATAAGAATAGT+GGG | 0.554946 | 7.3:-86853818 | MS.gene79552:CDS |
| TAAAAGCTCCAAATTCCCCT+TGG | 0.559666 | 7.3:-86851902 | MS.gene79552:CDS |
| GTCTACAAGAAACATAATAT+GGG | 0.562821 | 7.3:+86851833 | None:intergenic |
| ACATCACCTTCAACAACCAA+TGG | 0.570298 | 7.3:+86852617 | None:intergenic |
| AAGCCCTCAAAGTCATTGGA+TGG | 0.570523 | 7.3:-86854005 | MS.gene79552:CDS |
| CTATAAGAACAATCAATGGT+TGG | 0.572647 | 7.3:-86853775 | MS.gene79552:CDS |
| TCAATTCCCAAAGTACTATG+TGG | 0.573624 | 7.3:-86852699 | MS.gene79552:CDS |
| ATAATGATGAAATATGGAGT+TGG | 0.589987 | 7.3:-86853060 | MS.gene79552:CDS |
| TCGTGTCATAATGGGGAACA+TGG | 0.593202 | 7.3:-86852792 | MS.gene79552:CDS |
| GCATTAACCTACCTGAGCTA+CGG | 0.593483 | 7.3:+86853190 | None:intergenic |
| GTGGTAGCAGAGACAGTGGT+AGG | 0.593506 | 7.3:+86851927 | None:intergenic |
| ATATCACAAAAGGAGCTAGA+GGG | 0.599611 | 7.3:-86853134 | MS.gene79552:CDS |
| AATCAAGAAGGGAGCTGTGG+AGG | 0.602100 | 7.3:-86853709 | MS.gene79552:CDS |
| GATATCACAAAAGGAGCTAG+AGG | 0.603097 | 7.3:-86853135 | MS.gene79552:CDS |
| AGAATAGTGGGATGCCCGAA+CGG | 0.605315 | 7.3:-86853806 | MS.gene79552:CDS |
| TAAAATCAAGAAGGGAGCTG+TGG | 0.605391 | 7.3:-86853712 | MS.gene79552:CDS |
| ACAAGAAACATAATATGGGA+AGG | 0.616073 | 7.3:+86851837 | None:intergenic |
| ATTTGACCCGAAATCATCAC+GGG | 0.617104 | 7.3:+86851690 | None:intergenic |
| AATTTGACCCGAAATCATCA+CGG | 0.619442 | 7.3:+86851689 | None:intergenic |
| GAAAACATTAAGCAAAAGTG+AGG | 0.623615 | 7.3:-86851384 | None:intergenic |
| AATATAAGCGAGCAGAAGGG+TGG | 0.623778 | 7.3:-86853534 | MS.gene79552:CDS |
| TTCTATGTCGTGTCATAATG+GGG | 0.629256 | 7.3:-86852799 | MS.gene79552:CDS |
| ATTGGTTGGATAGATGAGGA+AGG | 0.630808 | 7.3:-86853606 | MS.gene79552:CDS |
| ACCCATTGGTTGGATAGATG+AGG | 0.634284 | 7.3:-86853610 | MS.gene79552:CDS |
| GGACGAAGTTGATCACTACC+AGG | 0.636279 | 7.3:+86852758 | None:intergenic |
| TTGGTTGGATAGATGAGGAA+GGG | 0.636931 | 7.3:-86853605 | MS.gene79552:CDS |
| TATCACAAAAGGAGCTAGAG+GGG | 0.640476 | 7.3:-86853133 | MS.gene79552:CDS |
| AGATTTACCGTAGCTCAGGT+AGG | 0.644301 | 7.3:-86853197 | MS.gene79552:CDS |
| GGAGATGTATGCAAACCAGA+TGG | 0.645158 | 7.3:-86853879 | MS.gene79552:CDS |
| GTATGCAAACCAGATGGCTA+TGG | 0.647107 | 7.3:-86853873 | MS.gene79552:CDS |
| AACATCACTAACAAAATGGG+AGG | 0.650923 | 7.3:-86853372 | MS.gene79552:CDS |
| TTGCAGAGACAATCAAGTGG+TGG | 0.652238 | 7.3:-86851417 | MS.gene79552:intron |
| AGTGATCAACTTCGTCCAAG+TGG | 0.658081 | 7.3:-86852752 | MS.gene79552:CDS |
| ACTGATGATGTAAAAGCTGA+TGG | 0.663049 | 7.3:-86853399 | MS.gene79552:CDS |
| CCTATCCAACAAAATAAATG+GGG | 0.665016 | 7.3:-86853469 | MS.gene79552:CDS |
| AACAAACCAGAGATAAGGGT+AGG | 0.668058 | 7.3:+86852975 | None:intergenic |
| TATGGTGGTAGCAGAGACAG+TGG | 0.680999 | 7.3:+86851923 | None:intergenic |
| AATAATATAAGCGAGCAGAA+GGG | 0.681135 | 7.3:-86853537 | MS.gene79552:CDS |
| TAGCTCCGTGAATTCTACAG+TGG | 0.682528 | 7.3:-86852271 | MS.gene79552:CDS |
| GAAGATGAATCCAAGTTAGG+GGG | 0.683883 | 7.3:-86853447 | MS.gene79552:CDS |
| GGTAGAGTTAAATGGCCAAG+AGG | 0.688803 | 7.3:-86853688 | MS.gene79552:CDS |
| TTCTTGCAGAGACAATCAAG+TGG | 0.698321 | 7.3:-86851420 | MS.gene79552:intron |
| TCAATGGTTGGACTATCCGG+AGG | 0.706941 | 7.3:-86853763 | MS.gene79552:CDS |
| GGAAGATGAATCCAAGTTAG+GGG | 0.707474 | 7.3:-86853448 | MS.gene79552:CDS |
| AAGATGAATCCAAGTTAGGG+GGG | 0.710249 | 7.3:-86853446 | MS.gene79552:CDS |
| TTGCGAATATGATAATGGGG+TGG | 0.713017 | 7.3:-86852729 | MS.gene79552:CDS |
| TGGTTGCGAATATGATAATG+GGG | 0.734754 | 7.3:-86852732 | MS.gene79552:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATAATATTCAATTCA+AGG | - | chr7.3:86853771-86853790 | MS.gene79552:CDS | 10.0% |
| !!! | TAATTTGTTATTTATGAAAT+AGG | + | chr7.3:86853647-86853666 | None:intergenic | 10.0% |
| !! | AAAAAAATCAAATAATAGAG+TGG | + | chr7.3:86853282-86853301 | None:intergenic | 15.0% |
| !! | AAAAAATCAAATAATAGAGT+GGG | + | chr7.3:86853281-86853300 | None:intergenic | 15.0% |
| !! | AACCAAAATTGTATTAATAA+AGG | + | chr7.3:86853432-86853451 | None:intergenic | 15.0% |
| !! | GAGGTAAAAAAAAAAATTAA+AGG | + | chr7.3:86852815-86852834 | None:intergenic | 15.0% |
| !! | TGGAAAAGAAATTAAATATT+TGG | - | chr7.3:86852578-86852597 | MS.gene79552:intron | 15.0% |
| !! | TTTAAAAACGGTAAAAAAAA+TGG | + | chr7.3:86853227-86853246 | None:intergenic | 15.0% |
| !!! | AAAGATTTTAAAATCAAGAA+GGG | - | chr7.3:86851680-86851699 | MS.gene79552:CDS | 15.0% |
| !!! | TACCTTTATTAATACAATTT+TGG | - | chr7.3:86853427-86853446 | MS.gene79552:CDS | 15.0% |
| !!! | TTTTTGTTTTTTGTTTTTAC+AGG | - | chr7.3:86853076-86853095 | MS.gene79552:CDS | 15.0% |
| !! | AACTAATCTAAAAAGAAAGT+GGG | - | chr7.3:86851424-86851443 | MS.gene79552:intron | 20.0% |
| !! | ACATAAAGTATAAGAATAGT+GGG | - | chr7.3:86851582-86851601 | MS.gene79552:intron | 20.0% |
| !! | GTAATAAAGCAAAACATTAA+AGG | + | chr7.3:86853410-86853429 | None:intergenic | 20.0% |
| !! | TACATAAAGTATAAGAATAG+TGG | - | chr7.3:86851581-86851600 | MS.gene79552:intron | 20.0% |
| !! | TTGTCAATAATGATGAAATA+TGG | - | chr7.3:86852334-86852353 | MS.gene79552:intron | 20.0% |
| !!! | GAAAGATTTTAAAATCAAGA+AGG | - | chr7.3:86851679-86851698 | MS.gene79552:CDS | 20.0% |
| !!! | GAATTCGTAGATTTTAAAAA+CGG | + | chr7.3:86853239-86853258 | None:intergenic | 20.0% |
| !!! | TTTTTTCTAGAAGTCTAATT+TGG | - | chr7.3:86853805-86853824 | MS.gene79552:CDS | 20.0% |
| ! | AATAAAGTGAACTGTAAACA+TGG | + | chr7.3:86852548-86852567 | None:intergenic | 25.0% |
| ! | ACCTATCCAACAAAATAAAT+GGG | - | chr7.3:86851930-86851949 | MS.gene79552:CDS | 25.0% |
| ! | ATAATGATGAAATATGGAGT+TGG | - | chr7.3:86852340-86852359 | MS.gene79552:intron | 25.0% |
| ! | ATGCCATAAACAATTCATAA+TGG | + | chr7.3:86853595-86853614 | None:intergenic | 25.0% |
| ! | CAACTAATCTAAAAAGAAAG+TGG | - | chr7.3:86851423-86851442 | MS.gene79552:intron | 25.0% |
| ! | CATAACATCACTAACAAAAT+GGG | - | chr7.3:86852025-86852044 | MS.gene79552:intron | 25.0% |
| ! | GTCTACAAGAAACATAATAT+GGG | + | chr7.3:86853570-86853589 | None:intergenic | 25.0% |
| ! | TATGCCTCTTAATGTTTAAT+TGG | - | chr7.3:86853956-86853975 | MS.gene79552:CDS | 25.0% |
| ! | TCATAACATCACTAACAAAA+TGG | - | chr7.3:86852024-86852043 | MS.gene79552:intron | 25.0% |
| ! | TGCCATAAACAATTCATAAT+GGG | + | chr7.3:86853594-86853613 | None:intergenic | 25.0% |
| ! | TGTTCTATAAGAACAATCAA+TGG | - | chr7.3:86851621-86851640 | MS.gene79552:intron | 25.0% |
| ! | TTAGATGATTATACTGAATC+TGG | - | chr7.3:86852094-86852113 | MS.gene79552:intron | 25.0% |
| ! | TTTATCTTCCATGAGAAAAA+TGG | - | chr7.3:86853538-86853557 | MS.gene79552:CDS | 25.0% |
| !! | ATATTTATCTGCTACGTTTT+GGG | - | chr7.3:86853320-86853339 | MS.gene79552:CDS | 25.0% |
| !! | TATTCTTAACTTTTGCATTG+TGG | - | chr7.3:86853908-86853927 | MS.gene79552:CDS | 25.0% |
| !!! | CAACTTCAATTGATTTTGAT+GGG | + | chr7.3:86853875-86853894 | None:intergenic | 25.0% |
| !!! | TCAACTTCAATTGATTTTGA+TGG | + | chr7.3:86853876-86853895 | None:intergenic | 25.0% |
| AATAATATAAGCGAGCAGAA+GGG | - | chr7.3:86851863-86851882 | MS.gene79552:CDS | 30.0% | |
| AATCCATATTTGCATTTGGA+TGG | + | chr7.3:86852382-86852401 | None:intergenic | 30.0% | |
| ACAAGAAACATAATATGGGA+AGG | + | chr7.3:86853566-86853585 | None:intergenic | 30.0% | |
| ACCAAATCCATATTTGCATT+TGG | + | chr7.3:86852386-86852405 | None:intergenic | 30.0% | |
| ATGATAACAAACCAGAGATA+AGG | + | chr7.3:86852433-86852452 | None:intergenic | 30.0% | |
| CAAAAACTTCAGGAAAAAAG+TGG | + | chr7.3:86851823-86851842 | None:intergenic | 30.0% | |
| CAAAAGAAGAATCTCATAAG+AGG | + | chr7.3:86853378-86853397 | None:intergenic | 30.0% | |
| CACCTATCCAACAAAATAAA+TGG | - | chr7.3:86851929-86851948 | MS.gene79552:CDS | 30.0% | |
| CCTATCCAACAAAATAAATG+GGG | - | chr7.3:86851931-86851950 | MS.gene79552:CDS | 30.0% | |
| CGTCTACAAGAAACATAATA+TGG | + | chr7.3:86853571-86853590 | None:intergenic | 30.0% | |
| CTATAAGAACAATCAATGGT+TGG | - | chr7.3:86851625-86851644 | MS.gene79552:intron | 30.0% | |
| GAAGCCAATTAAACATTAAG+AGG | + | chr7.3:86853963-86853982 | None:intergenic | 30.0% | |
| GATTATACTGAATCTGGATA+TGG | - | chr7.3:86852100-86852119 | MS.gene79552:intron | 30.0% | |
| GTATCATGTCGAATTGAAAA+CGG | - | chr7.3:86851757-86851776 | MS.gene79552:intron | 30.0% | |
| TATCATGTCGAATTGAAAAC+GGG | - | chr7.3:86851758-86851777 | MS.gene79552:intron | 30.0% | |
| TCACTTTATTGTGATGTTGA+TGG | - | chr7.3:86852558-86852577 | MS.gene79552:intron | 30.0% | |
| TCATCTTCTATGATTCATCT+TGG | - | chr7.3:86853347-86853366 | MS.gene79552:CDS | 30.0% | |
| TCCAAATGCAAATATGGATT+TGG | - | chr7.3:86852382-86852401 | MS.gene79552:intron | 30.0% | |
| TCTCATGGAAGATAAAAGAA+TGG | + | chr7.3:86853534-86853553 | None:intergenic | 30.0% | |
| TGAATCTGGATATGGAAAAT+TGG | - | chr7.3:86852108-86852127 | MS.gene79552:intron | 30.0% | |
| TGATAACAAACCAGAGATAA+GGG | + | chr7.3:86852432-86852451 | None:intergenic | 30.0% | |
| TTCATCATATTAGAGTGAAG+CGG | + | chr7.3:86852971-86852990 | None:intergenic | 30.0% | |
| TTCTGCTCGCTTATATTATT+GGG | + | chr7.3:86851863-86851882 | None:intergenic | 30.0% | |
| ! | CATATTTATCTGCTACGTTT+TGG | - | chr7.3:86853319-86853338 | MS.gene79552:CDS | 30.0% |
| ! | CTCTTATGAGATTCTTCTTT+TGG | - | chr7.3:86853376-86853395 | MS.gene79552:CDS | 30.0% |
| ! | TATTTATCTGCTACGTTTTG+GGG | - | chr7.3:86853321-86853340 | MS.gene79552:CDS | 30.0% |
| !! | TTTATGAAATAGGCATCGAT+TGG | + | chr7.3:86853637-86853656 | None:intergenic | 30.0% |
| !! | TTTGGTTTGTGAAATACCTT+AGG | - | chr7.3:86853445-86853464 | MS.gene79552:CDS | 30.0% |
| !!! | ATCTTCCCCATTTATTTTGT+TGG | + | chr7.3:86851939-86851958 | None:intergenic | 30.0% |
| !!! | GTAAGCTTTTTCATGAGTTT+TGG | - | chr7.3:86853157-86853176 | MS.gene79552:CDS | 30.0% |
| !!! | TTTTTTCCTGAAGTTTTTGC+TGG | - | chr7.3:86851824-86851843 | MS.gene79552:intron | 30.0% |
| AAAAATCTAGCACAACCTCT+TGG | + | chr7.3:86851730-86851749 | None:intergenic | 35.0% | |
| AACATCACTAACAAAATGGG+AGG | - | chr7.3:86852028-86852047 | MS.gene79552:intron | 35.0% | |
| AAGATTTCCCGTGATGATTT+CGG | - | chr7.3:86853703-86853722 | MS.gene79552:CDS | 35.0% | |
| AAGCAAGCTGATATCACAAA+AGG | - | chr7.3:86852256-86852275 | MS.gene79552:intron | 35.0% | |
| AATGGAAAAATGAAGCCAAG+GGG | + | chr7.3:86853516-86853535 | None:intergenic | 35.0% | |
| AATTTGACCCGAAATCATCA+CGG | + | chr7.3:86853714-86853733 | None:intergenic | 35.0% | |
| AGAATGGAAAAATGAAGCCA+AGG | + | chr7.3:86853518-86853537 | None:intergenic | 35.0% | |
| AGTGGTTGCGAATATGATAA+TGG | - | chr7.3:86852666-86852685 | MS.gene79552:CDS | 35.0% | |
| ATATCACAAAAGGAGCTAGA+GGG | - | chr7.3:86852266-86852285 | MS.gene79552:CDS | 35.0% | |
| ATATCTAACACTAACACACG+AGG | + | chr7.3:86852834-86852853 | None:intergenic | 35.0% | |
| CAATAATATAAGCGAGCAGA+AGG | - | chr7.3:86851862-86851881 | MS.gene79552:CDS | 35.0% | |
| CGCCCATTATGAATTGTTTA+TGG | - | chr7.3:86853589-86853608 | MS.gene79552:CDS | 35.0% | |
| CTTATAGAACATCAACCGTT+CGG | + | chr7.3:86851612-86851631 | None:intergenic | 35.0% | |
| CTTCTGCTCGCTTATATTAT+TGG | + | chr7.3:86851864-86851883 | None:intergenic | 35.0% | |
| GAATGGAAAAATGAAGCCAA+GGG | + | chr7.3:86853517-86853536 | None:intergenic | 35.0% | |
| GTGGTTGCGAATATGATAAT+GGG | - | chr7.3:86852667-86852686 | MS.gene79552:CDS | 35.0% | |
| GTTCTATGTCGTGTCATAAT+GGG | - | chr7.3:86852600-86852619 | MS.gene79552:intron | 35.0% | |
| TCCAAACCACATAGTACTTT+GGG | + | chr7.3:86852710-86852729 | None:intergenic | 35.0% | |
| TCCAATCAATCTCGTTTGTT+TGG | + | chr7.3:86851504-86851523 | None:intergenic | 35.0% | |
| TCTCCATCCAAATGCAAATA+TGG | - | chr7.3:86852376-86852395 | MS.gene79552:intron | 35.0% | |
| TTATAGAACATCAACCGTTC+GGG | + | chr7.3:86851611-86851630 | None:intergenic | 35.0% | |
| TTATCATATTCGCAACCACT+TGG | + | chr7.3:86852666-86852685 | None:intergenic | 35.0% | |
| TTCCAAACCACATAGTACTT+TGG | + | chr7.3:86852711-86852730 | None:intergenic | 35.0% | |
| TTCTATGTCGTGTCATAATG+GGG | - | chr7.3:86852601-86852620 | MS.gene79552:intron | 35.0% | |
| TTGAAGCTGACAACAAATTC+TGG | + | chr7.3:86852759-86852778 | None:intergenic | 35.0% | |
| ! | ACTGATGATGTAAAAGCTGA+TGG | - | chr7.3:86852001-86852020 | MS.gene79552:intron | 35.0% |
| ! | ATGATTTCGGGTCAAATTTG+AGG | - | chr7.3:86853716-86853735 | MS.gene79552:CDS | 35.0% |
| ! | TCAAATTTGAGGTCGATTGT+TGG | - | chr7.3:86853727-86853746 | MS.gene79552:CDS | 35.0% |
| ! | TCAATTCCCAAAGTACTATG+TGG | - | chr7.3:86852701-86852720 | MS.gene79552:CDS | 35.0% |
| ! | TGGTTGCGAATATGATAATG+GGG | - | chr7.3:86852668-86852687 | MS.gene79552:CDS | 35.0% |
| !! | AGAATTTGTTGTCAGCTTCA+AGG | - | chr7.3:86852758-86852777 | MS.gene79552:CDS | 35.0% |
| !! | CTTCAATTGATTTTGATGGG+AGG | + | chr7.3:86853872-86853891 | None:intergenic | 35.0% |
| !!! | CCCCATTTATTTTGTTGGAT+AGG | + | chr7.3:86851934-86851953 | None:intergenic | 35.0% |
| AAAATGGGAGGTGGAAAAGT+TGG | - | chr7.3:86852040-86852059 | MS.gene79552:intron | 40.0% | |
| AAATGAAGCCAAGGGGAATT+TGG | + | chr7.3:86853509-86853528 | None:intergenic | 40.0% | |
| AACAAACCAGAGATAAGGGT+AGG | + | chr7.3:86852428-86852447 | None:intergenic | 40.0% | |
| AAGATGAATCCAAGTTAGGG+GGG | - | chr7.3:86851954-86851973 | MS.gene79552:intron | 40.0% | |
| ACATCACCTTCAACAACCAA+TGG | + | chr7.3:86852786-86852805 | None:intergenic | 40.0% | |
| AGATGTGTTGCAGATTTGAC+TGG | - | chr7.3:86851452-86851471 | MS.gene79552:intron | 40.0% | |
| AGATTTCCCGTGATGATTTC+GGG | - | chr7.3:86853704-86853723 | MS.gene79552:CDS | 40.0% | |
| AGTGTCCACTGTAGAATTCA+CGG | + | chr7.3:86853137-86853156 | None:intergenic | 40.0% | |
| ATCACTAACAAAATGGGAGG+TGG | - | chr7.3:86852031-86852050 | MS.gene79552:intron | 40.0% | |
| ATGCTAATGTTCGCTATGCA+TGG | - | chr7.3:86852290-86852309 | MS.gene79552:CDS | 40.0% | |
| ATTGAGATTTACCGTAGCTC+AGG | - | chr7.3:86852199-86852218 | MS.gene79552:intron | 40.0% | |
| ATTGGTTGGATAGATGAGGA+AGG | - | chr7.3:86851794-86851813 | MS.gene79552:intron | 40.0% | |
| ATTTGACCCGAAATCATCAC+GGG | + | chr7.3:86853713-86853732 | None:intergenic | 40.0% | |
| CAATCAATGGTTGGACTATC+CGG | - | chr7.3:86851634-86851653 | MS.gene79552:CDS | 40.0% | |
| CTTACAGGAATGACTGCTTT+GGG | - | chr7.3:86852157-86852176 | MS.gene79552:intron | 40.0% | |
| GAAGATGAATCCAAGTTAGG+GGG | - | chr7.3:86851953-86851972 | MS.gene79552:intron | 40.0% | |
| GATATCACAAAAGGAGCTAG+AGG | - | chr7.3:86852265-86852284 | MS.gene79552:intron | 40.0% | |
| GCCAAACAAACGAGATTGAT+TGG | - | chr7.3:86851500-86851519 | MS.gene79552:intron | 40.0% | |
| GCTATGGTGCAAGTATTTCT+AGG | - | chr7.3:86851543-86851562 | MS.gene79552:intron | 40.0% | |
| GGAAGATGAATCCAAGTTAG+GGG | - | chr7.3:86851952-86851971 | MS.gene79552:intron | 40.0% | |
| GGGAAGATGAATCCAAGTTA+GGG | - | chr7.3:86851951-86851970 | MS.gene79552:intron | 40.0% | |
| GGTTCTATGTCGTGTCATAA+TGG | - | chr7.3:86852599-86852618 | MS.gene79552:intron | 40.0% | |
| GTAGAACCAGCAAAAACTTC+AGG | + | chr7.3:86851833-86851852 | None:intergenic | 40.0% | |
| TAAAAGCTCCAAATTCCCCT+TGG | - | chr7.3:86853498-86853517 | MS.gene79552:CDS | 40.0% | |
| TAAAATCAAGAAGGGAGCTG+TGG | - | chr7.3:86851688-86851707 | MS.gene79552:CDS | 40.0% | |
| TATCACAAAAGGAGCTAGAG+GGG | - | chr7.3:86852267-86852286 | MS.gene79552:CDS | 40.0% | |
| TCCTCATCTATCCAACCAAT+GGG | + | chr7.3:86851794-86851813 | None:intergenic | 40.0% | |
| TCTTACAGGAATGACTGCTT+TGG | - | chr7.3:86852156-86852175 | MS.gene79552:intron | 40.0% | |
| TTCCTCATCTATCCAACCAA+TGG | + | chr7.3:86851795-86851814 | None:intergenic | 40.0% | |
| TTCTTGCAGAGACAATCAAG+TGG | - | chr7.3:86853980-86853999 | MS.gene79552:CDS | 40.0% | |
| TTGGTTGGATAGATGAGGAA+GGG | - | chr7.3:86851795-86851814 | MS.gene79552:intron | 40.0% | |
| ! | TCCCAAAGTACTATGTGGTT+TGG | - | chr7.3:86852706-86852725 | MS.gene79552:CDS | 40.0% |
| ! | TTGATGGGAGGTATAAAGAC+AGG | + | chr7.3:86853860-86853879 | None:intergenic | 40.0% |
| ! | TTGTGATATCAGCTTGCTTC+TGG | + | chr7.3:86852255-86852274 | None:intergenic | 40.0% |
| !! | AGGGGAATTTGGAGCTTTTA+TGG | + | chr7.3:86853498-86853517 | None:intergenic | 40.0% |
| !! | ATGGCTTGCTTGTTCTAAAG+AGG | - | chr7.3:86852309-86852328 | MS.gene79552:intron | 40.0% |
| !! | GCACAGAAGTTGTTTCTTAC+AGG | - | chr7.3:86852142-86852161 | MS.gene79552:intron | 40.0% |
| !! | GGAAGGAACCATTTTTCTCA+TGG | + | chr7.3:86853549-86853568 | None:intergenic | 40.0% |
| !! | GGAATTTGGAGCTTTTATGG+TGG | + | chr7.3:86853495-86853514 | None:intergenic | 40.0% |
| !! | TTGCGAATATGATAATGGGG+TGG | - | chr7.3:86852671-86852690 | MS.gene79552:CDS | 40.0% |
| AAGCCCTCAAAGTCATTGGA+TGG | - | chr7.3:86851395-86851414 | MS.gene79552:CDS | 45.0% | |
| AATATAAGCGAGCAGAAGGG+TGG | - | chr7.3:86851866-86851885 | MS.gene79552:CDS | 45.0% | |
| ACCAAGTCAACAACTTCCTC+CGG | + | chr7.3:86851656-86851675 | None:intergenic | 45.0% | |
| AGATTTACCGTAGCTCAGGT+AGG | - | chr7.3:86852203-86852222 | MS.gene79552:intron | 45.0% | |
| AGCTCCATCCAATGACTTTG+AGG | + | chr7.3:86851402-86851421 | None:intergenic | 45.0% | |
| AGGAAAGCCCTCAAAGTCAT+TGG | - | chr7.3:86851391-86851410 | MS.gene79552:CDS | 45.0% | |
| AGTGATCAACTTCGTCCAAG+TGG | - | chr7.3:86852648-86852667 | MS.gene79552:CDS | 45.0% | |
| ATACTTGCACCATAGCCATC+TGG | + | chr7.3:86851539-86851558 | None:intergenic | 45.0% | |
| CTGTTACCTACCCTTATCTC+TGG | - | chr7.3:86852419-86852438 | MS.gene79552:intron | 45.0% | |
| GCATTAACCTACCTGAGCTA+CGG | + | chr7.3:86852213-86852232 | None:intergenic | 45.0% | |
| GCTCCATCCAATGACTTTGA+GGG | + | chr7.3:86851401-86851420 | None:intergenic | 45.0% | |
| GCTGTGGAGGTAGAGTTAAA+TGG | - | chr7.3:86851704-86851723 | MS.gene79552:CDS | 45.0% | |
| GGAGATGTATGCAAACCAGA+TGG | - | chr7.3:86851521-86851540 | MS.gene79552:intron | 45.0% | |
| GGGGAAGATGAATCCAAGTT+AGG | - | chr7.3:86851950-86851969 | MS.gene79552:intron | 45.0% | |
| GGTAGAGTTAAATGGCCAAG+AGG | - | chr7.3:86851712-86851731 | MS.gene79552:intron | 45.0% | |
| GTATGCAAACCAGATGGCTA+TGG | - | chr7.3:86851527-86851546 | MS.gene79552:intron | 45.0% | |
| GTTTGCAACAACCCATTGGT+TGG | - | chr7.3:86851780-86851799 | MS.gene79552:intron | 45.0% | |
| TAGCTCCGTGAATTCTACAG+TGG | - | chr7.3:86853129-86853148 | MS.gene79552:CDS | 45.0% | |
| TGTTTGGCAACCACACTTGT+CGG | + | chr7.3:86851488-86851507 | None:intergenic | 45.0% | |
| TTGCAGAGACAATCAAGTGG+TGG | - | chr7.3:86853983-86854002 | MS.gene79552:CDS | 45.0% | |
| ! | AAGGCTCCATTGGTTGTTGA+AGG | - | chr7.3:86852777-86852796 | MS.gene79552:CDS | 45.0% |
| ! | ACAGTGGTAGGTTTTGCCTA+AGG | + | chr7.3:86853464-86853483 | None:intergenic | 45.0% |
| ! | ACCCATTGGTTGGATAGATG+AGG | - | chr7.3:86851790-86851809 | MS.gene79552:intron | 45.0% |
| ! | CAAGTTAGGGGGGTATAGTT+GGG | - | chr7.3:86851964-86851983 | MS.gene79552:intron | 45.0% |
| ! | TCGTGTCATAATGGGGAACA+TGG | - | chr7.3:86852608-86852627 | MS.gene79552:intron | 45.0% |
| !! | AGTTTTGACACCGACAAGTG+TGG | - | chr7.3:86851475-86851494 | MS.gene79552:intron | 45.0% |
| !! | CAATCAAGTGGTGGATCAGA+TGG | - | chr7.3:86853992-86854011 | MS.gene79552:CDS | 45.0% |
| !! | GTATTTCTAGGTCGTTCGTC+AGG | - | chr7.3:86851555-86851574 | MS.gene79552:intron | 45.0% |
| !! | AATATGTTAAAAAAATAAAA+AGG | + | chr7.3:86853305-86853324 | None:intergenic | 5.0% |
| AACATGGAGCTTCTTCGTCC+TGG | - | chr7.3:86852624-86852643 | MS.gene79552:CDS | 50.0% | |
| AATCAAGAAGGGAGCTGTGG+AGG | - | chr7.3:86851691-86851710 | MS.gene79552:CDS | 50.0% | |
| ACGGGTTTGCAACAACCCAT+TGG | - | chr7.3:86851776-86851795 | MS.gene79552:intron | 50.0% | |
| CCAACTATACCCCCCTAACT+TGG | + | chr7.3:86851966-86851985 | None:intergenic | 50.0% | |
| TATGGTGGTAGCAGAGACAG+TGG | + | chr7.3:86853480-86853499 | None:intergenic | 50.0% | |
| TCAATGGTTGGACTATCCGG+AGG | - | chr7.3:86851637-86851656 | MS.gene79552:CDS | 50.0% | |
| TGTCAGCTTCAAGGCTCCAT+TGG | - | chr7.3:86852767-86852786 | MS.gene79552:CDS | 50.0% | |
| ! | AGAATAGTGGGATGCCCGAA+CGG | - | chr7.3:86851594-86851613 | MS.gene79552:intron | 50.0% |
| ! | CCAAGTTAGGGGGGTATAGT+TGG | - | chr7.3:86851963-86851982 | MS.gene79552:intron | 50.0% |
| ! | GGACGAAGTTGATCACTACC+AGG | + | chr7.3:86852645-86852664 | None:intergenic | 50.0% |
| ! | TCCGGAGGAAGTTGTTGACT+TGG | - | chr7.3:86851652-86851671 | MS.gene79552:CDS | 50.0% |
| GTGGTAGCAGAGACAGTGGT+AGG | + | chr7.3:86853476-86853495 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 86851386 | 86854036 | 86851386 | ID=MS.gene79552 |
| chr7.3 | mRNA | 86851386 | 86854036 | 86851386 | ID=MS.gene79552.t1;Parent=MS.gene79552 |
| chr7.3 | exon | 86852982 | 86854036 | 86852982 | ID=MS.gene79552.t1.exon1;Parent=MS.gene79552.t1 |
| chr7.3 | CDS | 86852982 | 86854036 | 86852982 | ID=cds.MS.gene79552.t1;Parent=MS.gene79552.t1 |
| chr7.3 | exon | 86852624 | 86852865 | 86852624 | ID=MS.gene79552.t1.exon2;Parent=MS.gene79552.t1 |
| chr7.3 | CDS | 86852624 | 86852865 | 86852624 | ID=cds.MS.gene79552.t1;Parent=MS.gene79552.t1 |
| chr7.3 | exon | 86852266 | 86852324 | 86852266 | ID=MS.gene79552.t1.exon3;Parent=MS.gene79552.t1 |
| chr7.3 | CDS | 86852266 | 86852324 | 86852266 | ID=cds.MS.gene79552.t1;Parent=MS.gene79552.t1 |
| chr7.3 | exon | 86851839 | 86851955 | 86851839 | ID=MS.gene79552.t1.exon4;Parent=MS.gene79552.t1 |
| chr7.3 | CDS | 86851839 | 86851955 | 86851839 | ID=cds.MS.gene79552.t1;Parent=MS.gene79552.t1 |
| chr7.3 | exon | 86851630 | 86851725 | 86851630 | ID=MS.gene79552.t1.exon5;Parent=MS.gene79552.t1 |
| chr7.3 | CDS | 86851630 | 86851725 | 86851630 | ID=cds.MS.gene79552.t1;Parent=MS.gene79552.t1 |
| chr7.3 | exon | 86851386 | 86851433 | 86851386 | ID=MS.gene79552.t1.exon6;Parent=MS.gene79552.t1 |
| chr7.3 | CDS | 86851386 | 86851433 | 86851386 | ID=cds.MS.gene79552.t1;Parent=MS.gene79552.t1 |
| Gene Sequence |
| Protein sequence |
