Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74956.t1 | XP_013470301.1 | 95.1 | 568 | 28 | 0 | 39 | 606 | 1 | 568 | 0.00E+00 | 1109.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74956.t1 | Q8RY59 | 43.0 | 528 | 269 | 12 | 89 | 600 | 55 | 566 | 4.6e-109 | 396.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74956.t1 | A0A072VQR8 | 95.1 | 568 | 28 | 0 | 39 | 606 | 1 | 568 | 0.0e+00 | 1109.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene74956 | 0.835089 | 2.06E-56 | -1.69E-46 |
| MS.gene049254 | MS.gene74956 | 0.841806 | 3.80E-58 | -1.69E-46 |
| MS.gene049264 | MS.gene74956 | 0.814365 | 1.60E-51 | -1.69E-46 |
| MS.gene049283 | MS.gene74956 | 0.821444 | 4.02E-53 | -1.69E-46 |
| MS.gene049350 | MS.gene74956 | 0.800777 | 1.23E-48 | -1.69E-46 |
| MS.gene049368 | MS.gene74956 | 0.810303 | 1.23E-50 | -1.69E-46 |
| MS.gene049419 | MS.gene74956 | -0.816899 | 4.36E-52 | -1.69E-46 |
| MS.gene049499 | MS.gene74956 | 0.86285 | 3.78E-64 | -1.69E-46 |
| MS.gene049652 | MS.gene74956 | 0.810198 | 1.30E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene74956 | 0.802941 | 4.42E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene74956 | 0.8034 | 3.55E-49 | -1.69E-46 |
| MS.gene050559 | MS.gene74956 | 0.811923 | 5.49E-51 | -1.69E-46 |
| MS.gene050561 | MS.gene74956 | 0.811984 | 5.32E-51 | -1.69E-46 |
| MS.gene050562 | MS.gene74956 | 0.808409 | 3.14E-50 | -1.69E-46 |
| MS.gene050828 | MS.gene74956 | 0.80043 | 1.45E-48 | -1.69E-46 |
| MS.gene051332 | MS.gene74956 | 0.830098 | 3.56E-55 | -1.69E-46 |
| MS.gene051343 | MS.gene74956 | 0.805308 | 1.42E-49 | -1.69E-46 |
| MS.gene051490 | MS.gene74956 | 0.803014 | 4.27E-49 | -1.69E-46 |
| MS.gene051492 | MS.gene74956 | 0.803722 | 3.04E-49 | -1.69E-46 |
| MS.gene051676 | MS.gene74956 | 0.818113 | 2.32E-52 | -1.69E-46 |
| MS.gene051699 | MS.gene74956 | 0.818419 | 1.98E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene74956 | 0.822985 | 1.77E-53 | -1.69E-46 |
| MS.gene051832 | MS.gene74956 | 0.805953 | 1.04E-49 | -1.69E-46 |
| MS.gene051975 | MS.gene74956 | 0.814265 | 1.68E-51 | -1.69E-46 |
| MS.gene052108 | MS.gene74956 | 0.808288 | 3.33E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene74956 | 0.818763 | 1.65E-52 | -1.69E-46 |
| MS.gene052493 | MS.gene74956 | 0.826951 | 2.05E-54 | -1.69E-46 |
| MS.gene052518 | MS.gene74956 | 0.800408 | 1.46E-48 | -1.69E-46 |
| MS.gene052519 | MS.gene74956 | 0.811814 | 5.80E-51 | -1.69E-46 |
| MS.gene052533 | MS.gene74956 | 0.806013 | 1.01E-49 | -1.69E-46 |
| MS.gene052534 | MS.gene74956 | 0.815706 | 8.06E-52 | -1.69E-46 |
| MS.gene052609 | MS.gene74956 | 0.803472 | 3.43E-49 | -1.69E-46 |
| MS.gene052685 | MS.gene74956 | 0.809604 | 1.74E-50 | -1.69E-46 |
| MS.gene052773 | MS.gene74956 | 0.802258 | 6.11E-49 | -1.69E-46 |
| MS.gene053094 | MS.gene74956 | 0.8047 | 1.90E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene74956 | 0.809187 | 2.14E-50 | -1.69E-46 |
| MS.gene053298 | MS.gene74956 | 0.811165 | 8.03E-51 | -1.69E-46 |
| MS.gene053340 | MS.gene74956 | 0.809378 | 1.95E-50 | -1.69E-46 |
| MS.gene053963 | MS.gene74956 | 0.821959 | 3.06E-53 | -1.69E-46 |
| MS.gene05415 | MS.gene74956 | 0.812218 | 4.74E-51 | -1.69E-46 |
| MS.gene054222 | MS.gene74956 | 0.8493 | 3.53E-60 | -1.69E-46 |
| MS.gene05423 | MS.gene74956 | 0.81536 | 9.62E-52 | -1.69E-46 |
| MS.gene054479 | MS.gene74956 | 0.838956 | 2.11E-57 | -1.69E-46 |
| MS.gene054576 | MS.gene74956 | 0.843876 | 1.07E-58 | -1.69E-46 |
| MS.gene05458 | MS.gene74956 | 0.802844 | 4.63E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene74956 | 0.807707 | 4.43E-50 | -1.69E-46 |
| MS.gene054709 | MS.gene74956 | 0.82477 | 6.74E-54 | -1.69E-46 |
| MS.gene054892 | MS.gene74956 | 0.813206 | 2.88E-51 | -1.69E-46 |
| MS.gene054893 | MS.gene74956 | 0.810527 | 1.10E-50 | -1.69E-46 |
| MS.gene055141 | MS.gene74956 | 0.801172 | 1.02E-48 | -1.69E-46 |
| MS.gene055229 | MS.gene74956 | 0.807951 | 3.93E-50 | -1.69E-46 |
| MS.gene055313 | MS.gene74956 | 0.819274 | 1.27E-52 | -1.69E-46 |
| MS.gene055513 | MS.gene74956 | 0.80792 | 3.99E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene74956 | 0.811521 | 6.72E-51 | -1.69E-46 |
| MS.gene055724 | MS.gene74956 | 0.803323 | 3.68E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene74956 | 0.808255 | 3.39E-50 | -1.69E-46 |
| MS.gene055841 | MS.gene74956 | 0.804387 | 2.21E-49 | -1.69E-46 |
| MS.gene055864 | MS.gene74956 | 0.804614 | 1.98E-49 | -1.69E-46 |
| MS.gene056050 | MS.gene74956 | 0.800332 | 1.51E-48 | -1.69E-46 |
| MS.gene056162 | MS.gene74956 | 0.802223 | 6.21E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene74956 | 0.80824 | 3.41E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene74956 | 0.843985 | 1.00E-58 | -1.69E-46 |
| MS.gene056776 | MS.gene74956 | 0.813625 | 2.33E-51 | -1.69E-46 |
| MS.gene056779 | MS.gene74956 | 0.822662 | 2.10E-53 | -1.69E-46 |
| MS.gene05690 | MS.gene74956 | 0.817189 | 3.75E-52 | -1.69E-46 |
| MS.gene056986 | MS.gene74956 | 0.814575 | 1.44E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene74956 | 0.824905 | 6.26E-54 | -1.69E-46 |
| MS.gene057102 | MS.gene74956 | 0.850345 | 1.80E-60 | -1.69E-46 |
| MS.gene057155 | MS.gene74956 | 0.806182 | 9.31E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene74956 | 0.827085 | 1.90E-54 | -1.69E-46 |
| MS.gene057611 | MS.gene74956 | 0.820288 | 7.42E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene74956 | 0.801658 | 8.12E-49 | -1.69E-46 |
| MS.gene058008 | MS.gene74956 | 0.806565 | 7.73E-50 | -1.69E-46 |
| MS.gene058159 | MS.gene74956 | 0.837808 | 4.18E-57 | -1.69E-46 |
| MS.gene058279 | MS.gene74956 | 0.811141 | 8.12E-51 | -1.69E-46 |
| MS.gene058289 | MS.gene74956 | 0.805118 | 1.56E-49 | -1.69E-46 |
| MS.gene059144 | MS.gene74956 | 0.802556 | 5.30E-49 | -1.69E-46 |
| MS.gene059170 | MS.gene74956 | 0.806217 | 9.16E-50 | -1.69E-46 |
| MS.gene059439 | MS.gene74956 | 0.816735 | 4.74E-52 | -1.69E-46 |
| MS.gene05952 | MS.gene74956 | 0.813868 | 2.06E-51 | -1.69E-46 |
| MS.gene059774 | MS.gene74956 | 0.826021 | 3.41E-54 | -1.69E-46 |
| MS.gene05985 | MS.gene74956 | -0.834832 | 2.39E-56 | -1.69E-46 |
| MS.gene059952 | MS.gene74956 | 0.822962 | 1.79E-53 | -1.69E-46 |
| MS.gene059965 | MS.gene74956 | 0.802456 | 5.56E-49 | -1.69E-46 |
| MS.gene060012 | MS.gene74956 | 0.839986 | 1.14E-57 | -1.69E-46 |
| MS.gene060365 | MS.gene74956 | 0.819579 | 1.08E-52 | -1.69E-46 |
| MS.gene060373 | MS.gene74956 | 0.801845 | 7.43E-49 | -1.69E-46 |
| MS.gene060520 | MS.gene74956 | 0.805539 | 1.27E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene74956 | 0.8198 | 9.60E-53 | -1.69E-46 |
| MS.gene060697 | MS.gene74956 | 0.822679 | 2.08E-53 | -1.69E-46 |
| MS.gene060777 | MS.gene74956 | 0.815735 | 7.94E-52 | -1.69E-46 |
| MS.gene060840 | MS.gene74956 | 0.802395 | 5.73E-49 | -1.69E-46 |
| MS.gene060932 | MS.gene74956 | 0.803988 | 2.68E-49 | -1.69E-46 |
| MS.gene060933 | MS.gene74956 | 0.831627 | 1.50E-55 | -1.69E-46 |
| MS.gene060935 | MS.gene74956 | 0.840276 | 9.59E-58 | -1.69E-46 |
| MS.gene060937 | MS.gene74956 | 0.854596 | 1.11E-61 | -1.69E-46 |
| MS.gene061188 | MS.gene74956 | 0.839598 | 1.44E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene79552 | MS.gene74956 | PPI |
| MS.gene36039 | MS.gene74956 | PPI |
| MS.gene34237 | MS.gene74956 | PPI |
| MS.gene070621 | MS.gene74956 | PPI |
| MS.gene74956 | MS.gene027783 | PPI |
| MS.gene007901 | MS.gene74956 | PPI |
| MS.gene74956 | MS.gene069103 | PPI |
| MS.gene74956 | MS.gene046409 | PPI |
| MS.gene74956 | MS.gene032270 | PPI |
| MS.gene74956 | MS.gene057563 | PPI |
| MS.gene74956 | MS.gene070621 | PPI |
| MS.gene057563 | MS.gene74956 | PPI |
| MS.gene74956 | MS.gene065039 | PPI |
| MS.gene74956 | MS.gene001066 | PPI |
| MS.gene046444 | MS.gene74956 | PPI |
| MS.gene74956 | MS.gene021778 | PPI |
| MS.gene74956 | MS.gene029308 | PPI |
| MS.gene74956 | MS.gene76207 | PPI |
| MS.gene070678 | MS.gene74956 | PPI |
| MS.gene74956 | MS.gene046455 | PPI |
| MS.gene74956 | MS.gene070678 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74956.t1 | MTR_1g112330 | 95.070 | 568 | 28 | 0 | 39 | 606 | 1 | 568 | 0.0 | 1133 |
| MS.gene74956.t1 | MTR_1g112330 | 94.718 | 568 | 27 | 1 | 39 | 606 | 1 | 565 | 0.0 | 1124 |
| MS.gene74956.t1 | MTR_1g112330 | 95.604 | 455 | 20 | 0 | 39 | 493 | 1 | 455 | 0.0 | 918 |
| MS.gene74956.t1 | MTR_5g032190 | 76.408 | 568 | 125 | 4 | 39 | 605 | 1 | 560 | 0.0 | 884 |
| MS.gene74956.t1 | MTR_5g032190 | 79.141 | 489 | 95 | 2 | 39 | 527 | 1 | 482 | 0.0 | 797 |
| MS.gene74956.t1 | MTR_5g032190 | 79.296 | 483 | 93 | 2 | 39 | 521 | 1 | 476 | 0.0 | 791 |
| MS.gene74956.t1 | MTR_7g011550 | 45.390 | 564 | 265 | 9 | 39 | 597 | 1 | 526 | 8.90e-152 | 448 |
| MS.gene74956.t1 | MTR_5g029580 | 43.210 | 324 | 174 | 3 | 276 | 597 | 27 | 342 | 1.43e-86 | 274 |
| MS.gene74956.t1 | MTR_4g105740 | 31.788 | 302 | 161 | 8 | 311 | 607 | 46 | 307 | 1.56e-41 | 153 |
| MS.gene74956.t1 | MTR_3g077870 | 30.499 | 341 | 182 | 10 | 261 | 593 | 9 | 302 | 5.68e-41 | 152 |
| MS.gene74956.t1 | MTR_4g105740 | 32.192 | 292 | 153 | 8 | 311 | 597 | 46 | 297 | 9.30e-41 | 150 |
| MS.gene74956.t1 | MTR_8g088250 | 28.814 | 295 | 157 | 8 | 315 | 597 | 26 | 279 | 2.00e-32 | 127 |
| MS.gene74956.t1 | MTR_2g090130 | 41.333 | 150 | 51 | 2 | 316 | 463 | 103 | 217 | 6.62e-28 | 112 |
| MS.gene74956.t1 | MTR_2g090130 | 62.295 | 61 | 23 | 0 | 139 | 199 | 43 | 103 | 6.83e-21 | 92.0 |
| MS.gene74956.t1 | MTR_7g011640 | 45.455 | 110 | 41 | 2 | 139 | 248 | 15 | 105 | 2.01e-22 | 94.4 |
| MS.gene74956.t1 | MTR_7g011880 | 33.333 | 165 | 78 | 3 | 412 | 576 | 54 | 186 | 4.92e-20 | 89.0 |
| MS.gene74956.t1 | MTR_7g061850 | 39.583 | 96 | 56 | 1 | 277 | 370 | 28 | 123 | 1.41e-15 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74956.t1 | AT1G32230 | 43.074 | 527 | 269 | 11 | 89 | 600 | 55 | 565 | 4.68e-134 | 404 |
| MS.gene74956.t1 | AT1G32230 | 43.074 | 527 | 269 | 11 | 89 | 600 | 55 | 565 | 1.20e-133 | 403 |
| MS.gene74956.t1 | AT1G32230 | 43.074 | 527 | 269 | 11 | 89 | 600 | 55 | 565 | 1.20e-133 | 403 |
| MS.gene74956.t1 | AT1G32230 | 43.074 | 527 | 269 | 11 | 89 | 600 | 55 | 565 | 1.20e-133 | 403 |
| MS.gene74956.t1 | AT1G32230 | 43.074 | 527 | 269 | 11 | 89 | 600 | 55 | 565 | 1.20e-133 | 403 |
| MS.gene74956.t1 | AT1G32230 | 42.857 | 525 | 274 | 11 | 89 | 600 | 55 | 566 | 1.53e-133 | 403 |
| MS.gene74956.t1 | AT2G35510 | 39.515 | 577 | 320 | 13 | 39 | 600 | 1 | 563 | 2.24e-120 | 369 |
| MS.gene74956.t1 | AT2G35510 | 39.515 | 577 | 320 | 13 | 39 | 600 | 1 | 563 | 2.24e-120 | 369 |
| MS.gene74956.t1 | AT2G35510 | 40.605 | 463 | 255 | 9 | 39 | 493 | 1 | 451 | 1.63e-106 | 329 |
| MS.gene74956.t1 | AT1G23550 | 30.952 | 294 | 159 | 6 | 308 | 593 | 51 | 308 | 4.01e-40 | 149 |
| MS.gene74956.t1 | AT1G70440 | 27.795 | 331 | 188 | 7 | 274 | 593 | 6 | 296 | 1.50e-36 | 139 |
| MS.gene74956.t1 | AT1G70440 | 27.795 | 331 | 188 | 7 | 274 | 593 | 6 | 296 | 1.50e-36 | 139 |
| MS.gene74956.t1 | AT5G62520 | 26.190 | 252 | 138 | 4 | 346 | 593 | 89 | 296 | 6.45e-26 | 108 |
| MS.gene74956.t1 | AT5G62520 | 32.877 | 146 | 89 | 3 | 346 | 487 | 89 | 229 | 2.03e-21 | 94.4 |
| MS.gene74956.t1 | AT3G47720 | 24.723 | 271 | 142 | 7 | 343 | 602 | 91 | 310 | 6.16e-20 | 91.7 |
Find 135 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTGCGATGTTGACGAAAA+TGG | 0.184170 | 1.3:-76198574 | MS.gene74956:CDS |
| AATGAAATTAAATTACATTT+AGG | 0.198704 | 1.3:-76199575 | MS.gene74956:CDS |
| ATCAATTTGAACATGCTTAA+AGG | 0.213131 | 1.3:+76199490 | None:intergenic |
| TCGGAAGCAGCATAAATTTC+AGG | 0.217736 | 1.3:+76199665 | None:intergenic |
| GATTCTATGATCGTGATTAT+AGG | 0.222823 | 1.3:-76200727 | None:intergenic |
| CATTTAGGAATTGAAATAAA+TGG | 0.231625 | 1.3:-76199560 | MS.gene74956:CDS |
| TTCAAAATCATTATGATTGC+AGG | 0.266216 | 1.3:+76199457 | None:intergenic |
| GCATATAATGAAATTGTATA+TGG | 0.291709 | 1.3:-76199356 | MS.gene74956:CDS |
| TTGAAACTAATAACAAATTC+TGG | 0.295864 | 1.3:+76198382 | None:intergenic |
| TCCACAGGATGCTGTTGATT+TGG | 0.304882 | 1.3:-76199843 | MS.gene74956:CDS |
| TGATAGACCATCAAACGTTC+TGG | 0.312618 | 1.3:+76199887 | None:intergenic |
| TGTATATGGAAAGTTGGATT+TGG | 0.313935 | 1.3:-76199342 | MS.gene74956:CDS |
| CCGTGTAATAATGGGGAATA+TGG | 0.323010 | 1.3:-76198530 | MS.gene74956:CDS |
| TGTGCAAAAGATGTTTCTTA+AGG | 0.323221 | 1.3:-76199315 | MS.gene74956:CDS |
| ATTATGATTGCAGGCTTGTT+TGG | 0.340052 | 1.3:+76199466 | None:intergenic |
| AAATGTAATTTAATTTCATT+AGG | 0.344899 | 1.3:+76199578 | None:intergenic |
| TGTTTGACAACCTTGTTTCT+TGG | 0.346772 | 1.3:+76200010 | None:intergenic |
| ATATGTACCATCTGCACTTC+AGG | 0.348991 | 1.3:-76197551 | MS.gene74956:CDS |
| GTGCAAAAGATGTTTCTTAA+GGG | 0.359591 | 1.3:-76199314 | MS.gene74956:CDS |
| TATCAGATGAATTTGAAATC+TGG | 0.365305 | 1.3:-76199737 | MS.gene74956:CDS |
| ATATGACTCTCTGATTTCAT+TGG | 0.368978 | 1.3:+76199959 | None:intergenic |
| CGAGGGGATGTTGAAGCTTC+AGG | 0.375057 | 1.3:+76197642 | None:intergenic |
| AGAATTTGTTATTAGTTTCA+AGG | 0.376305 | 1.3:-76198380 | MS.gene74956:CDS |
| CTTAAGGGAACTGGTAGTTT+TGG | 0.384074 | 1.3:-76199299 | MS.gene74956:CDS |
| TGAAATTGTATATGGAAAGT+TGG | 0.390031 | 1.3:-76199348 | MS.gene74956:CDS |
| CGTTTGATGGTCTATCAAAA+TGG | 0.393202 | 1.3:-76199881 | MS.gene74956:CDS |
| ATTGCGATGTTGACGAAAAT+GGG | 0.394816 | 1.3:-76198573 | MS.gene74956:CDS |
| CATAGTAGGTAACTCTCCTT+TGG | 0.401981 | 1.3:+76199139 | None:intergenic |
| GGAGTAGGTGCATCCAAGTT+GGG | 0.410633 | 1.3:-76199539 | MS.gene74956:CDS |
| ACAACGGAAAGGCGTCTAAC+AGG | 0.411555 | 1.3:-76200132 | MS.gene74956:CDS |
| ATGAAATCAGAGAGTCATAT+TGG | 0.412100 | 1.3:-76199956 | MS.gene74956:CDS |
| GTTGAGCAAAATAAAAGTAT+AGG | 0.412784 | 1.3:-76199386 | MS.gene74956:CDS |
| AGCAGTAATAACATGGGAAA+TGG | 0.415932 | 1.3:-76199425 | MS.gene74956:CDS |
| AAGATGTTTCTTAAGGGAAC+TGG | 0.416920 | 1.3:-76199308 | MS.gene74956:CDS |
| ACCATGACATCAAGAATGTT+TGG | 0.429215 | 1.3:+76200284 | None:intergenic |
| GCCTTATGATCTCTGCAATC+AGG | 0.430030 | 1.3:-76199636 | MS.gene74956:CDS |
| GATAGACCATCAAACGTTCT+GGG | 0.444240 | 1.3:+76199888 | None:intergenic |
| TCCTGATTGCAGAGATCATA+AGG | 0.444505 | 1.3:+76199635 | None:intergenic |
| TACCTACTATGATGAATTGT+GGG | 0.444859 | 1.3:-76199127 | MS.gene74956:CDS |
| TACATCGGTGCAGTCGCGAT+TGG | 0.445376 | 1.3:-76199240 | MS.gene74956:CDS |
| ATTTAATTTCATTAGGACCT+TGG | 0.447429 | 1.3:+76199585 | None:intergenic |
| ATTTATGCTGCTTCCGATGA+AGG | 0.448045 | 1.3:-76199659 | MS.gene74956:CDS |
| TTAAGATTTAACTATTGTGC+TGG | 0.452841 | 1.3:+76196869 | None:intergenic |
| GTTTGCAACAACCTATTGCT+TGG | 0.460581 | 1.3:-76199715 | MS.gene74956:CDS |
| AGGATGCTGTTGATTTGGTT+AGG | 0.460743 | 1.3:-76199838 | MS.gene74956:CDS |
| TGAAGTGCAGATGGTACATA+TGG | 0.467187 | 1.3:+76197553 | None:intergenic |
| CGGAAGCCCAGAACGTTTGA+TGG | 0.469515 | 1.3:-76199894 | MS.gene74956:CDS |
| TAGAAATTCAACCTGGCAAA+AGG | 0.470103 | 1.3:+76199032 | None:intergenic |
| TGCAATCAGGACAGCAGAAA+AGG | 0.471869 | 1.3:-76199623 | MS.gene74956:CDS |
| GTCAAACATATGAGATTGAA+AGG | 0.473888 | 1.3:-76199995 | MS.gene74956:CDS |
| GTCTCATCAATCCAAGCAAT+AGG | 0.480763 | 1.3:+76199704 | None:intergenic |
| CTCTTGCGAGCTACATTACC+TGG | 0.482989 | 1.3:-76197376 | MS.gene74956:CDS |
| ATATTGGACGATCGTTGGTT+AGG | 0.486121 | 1.3:-76199940 | MS.gene74956:CDS |
| ACTATCATAGTCACTACTAC+TGG | 0.487570 | 1.3:+76198474 | None:intergenic |
| ATGCTAATGTTCGATATGCT+TGG | 0.490597 | 1.3:-76199172 | MS.gene74956:CDS |
| CGGAAGCAGCATAAATTTCA+GGG | 0.494199 | 1.3:+76199666 | None:intergenic |
| AGTAGTAGTGACTATGATAG+TGG | 0.498552 | 1.3:-76198472 | MS.gene74956:CDS |
| AATATGGAGCTTCTCCATCC+TGG | 0.503567 | 1.3:-76198514 | MS.gene74956:CDS |
| GCTTGGCTTGCTTCTTCCAA+AGG | 0.505689 | 1.3:-76199155 | MS.gene74956:CDS |
| TGGAGTAGGTGCATCCAAGT+TGG | 0.506701 | 1.3:-76199540 | MS.gene74956:CDS |
| TCCAAACATTCTTGATGTCA+TGG | 0.510629 | 1.3:-76200285 | MS.gene74956:CDS |
| ATACCTCAGGGAATTCCAAC+TGG | 0.510962 | 1.3:-76197669 | MS.gene74956:intron |
| TATGTACCATCTGCACTTCA+GGG | 0.512959 | 1.3:-76197550 | MS.gene74956:intron |
| GCTGTGGAGGTAGAGTTAAA+TGG | 0.513139 | 1.3:-76199791 | MS.gene74956:CDS |
| GGAATTGAAATAAATGGAGT+AGG | 0.514253 | 1.3:-76199554 | MS.gene74956:CDS |
| AACATGGGAAATGGAAGTGT+TGG | 0.515790 | 1.3:-76199416 | MS.gene74956:CDS |
| AACATGCTTAAAGGTGACAT+TGG | 0.523449 | 1.3:+76199499 | None:intergenic |
| GGTCATGAATCTTTGTTCCA+AGG | 0.527808 | 1.3:-76199602 | MS.gene74956:CDS |
| AAAAGTCCAGCACAAGATGA+TGG | 0.528460 | 1.3:+76199768 | None:intergenic |
| TCCACTCACATCCCAAAAGA+AGG | 0.531626 | 1.3:+76198010 | None:intergenic |
| TAACAAATTCTGGATAGATG+TGG | 0.531780 | 1.3:+76198392 | None:intergenic |
| AAACTGTACCAGTGAGGGTG+TGG | 0.533415 | 1.3:+76200261 | None:intergenic |
| GGGGTTAATTCAGCTAGCCA+TGG | 0.534332 | 1.3:-76197973 | MS.gene74956:CDS |
| ACTATGATGAATTGTGGGCT+TGG | 0.536837 | 1.3:-76199122 | MS.gene74956:CDS |
| GTCATGGTCCACACCCTCAC+TGG | 0.541537 | 1.3:-76200269 | MS.gene74956:intron |
| ATTCAACCTGGCAAAAGGAC+AGG | 0.542093 | 1.3:+76199037 | None:intergenic |
| ATAAGTTTCATATCCTCTGC+AGG | 0.543701 | 1.3:+76197576 | None:intergenic |
| GATGTACATTGAGGTAATAC+TGG | 0.544556 | 1.3:+76200043 | None:intergenic |
| CTATCAAAATGGTGGATGGA+AGG | 0.546660 | 1.3:-76199870 | MS.gene74956:CDS |
| GTAGTAGTGACTATGATAGT+GGG | 0.547301 | 1.3:-76198471 | MS.gene74956:CDS |
| GGACGGTACTGTCTAGTGCC+AGG | 0.550759 | 1.3:+76198496 | None:intergenic |
| AACAAATTCTGGATAGATGT+GGG | 0.554025 | 1.3:+76198393 | None:intergenic |
| AAATGGCCATCATCTTGTGC+TGG | 0.555550 | 1.3:-76199774 | MS.gene74956:CDS |
| CTATCATAGTCACTACTACT+GGG | 0.559417 | 1.3:+76198475 | None:intergenic |
| CTGCACCGATGTACTTGAGA+AGG | 0.562181 | 1.3:+76199250 | None:intergenic |
| GAGTAGGTGCATCCAAGTTG+GGG | 0.564548 | 1.3:-76199538 | MS.gene74956:CDS |
| AGCCCACAATTCATCATAGT+AGG | 0.565165 | 1.3:+76199125 | None:intergenic |
| TTTATGCTGCTTCCGATGAA+GGG | 0.565221 | 1.3:-76199658 | MS.gene74956:CDS |
| TTACCTACTATGATGAATTG+TGG | 0.569110 | 1.3:-76199128 | MS.gene74956:CDS |
| AAGGTCTCTTCTGATGCTGA+AGG | 0.569414 | 1.3:-76198361 | MS.gene74956:intron |
| ATTGCTTGGATTGATGAGAC+AGG | 0.571658 | 1.3:-76199701 | MS.gene74956:CDS |
| TGAAGATAGCAGTAATAACA+TGG | 0.572879 | 1.3:-76199432 | MS.gene74956:CDS |
| CGTTCAGAGTCTTCGAGAGT+AGG | 0.575834 | 1.3:-76197934 | MS.gene74956:CDS |
| TCTAAATGCATGCATGGCAT+TGG | 0.576632 | 1.3:-76199080 | MS.gene74956:CDS |
| TGCACCGATGTACTTGAGAA+GGG | 0.577902 | 1.3:+76199251 | None:intergenic |
| ACCTTGTGTTGAAGAAGACC+AGG | 0.580336 | 1.3:+76197358 | None:intergenic |
| CATAAACAAGGTTCCTGCAG+AGG | 0.585357 | 1.3:-76197589 | MS.gene74956:CDS |
| CCATATTCCCCATTATTACA+CGG | 0.586757 | 1.3:+76198530 | None:intergenic |
| TCTGCATCTAAATGCATGCA+TGG | 0.588450 | 1.3:-76199086 | MS.gene74956:CDS |
| CTGAAGCTTCAACATCCCCT+CGG | 0.589448 | 1.3:-76197641 | MS.gene74956:CDS |
| GGTACTGTCTAGTGCCAGGA+TGG | 0.592202 | 1.3:+76198500 | None:intergenic |
| TCAAACATATGAGATTGAAA+GGG | 0.594105 | 1.3:-76199994 | MS.gene74956:CDS |
| TACATACCCTGAAGTGCAGA+TGG | 0.595712 | 1.3:+76197544 | None:intergenic |
| CAAATAAACTGTACCAGTGA+GGG | 0.596715 | 1.3:+76200256 | None:intergenic |
| GAGATCATAAGGCCCTTCAT+CGG | 0.599029 | 1.3:+76199646 | None:intergenic |
| GAAGCTTCAGGCGAACCAGT+TGG | 0.600300 | 1.3:+76197654 | None:intergenic |
| TGGTCTATCAAAATGGTGGA+TGG | 0.608244 | 1.3:-76199874 | MS.gene74956:CDS |
| TATATGAATTATAAGAAGAG+CGG | 0.609096 | 1.3:-76199914 | MS.gene74956:CDS |
| TGATGTAAAGAAAGCAGCTG+TGG | 0.610026 | 1.3:-76199807 | MS.gene74956:CDS |
| GAGTCATATTGGACGATCGT+TGG | 0.611529 | 1.3:-76199945 | MS.gene74956:CDS |
| ACCTGGTCTTCTTCAACACA+AGG | 0.612227 | 1.3:-76197359 | MS.gene74956:intron |
| TTGCGATGTTGACGAAAATG+GGG | 0.614839 | 1.3:-76198572 | MS.gene74956:CDS |
| ACTAATAACACCAAGAAACA+AGG | 0.615567 | 1.3:-76200020 | MS.gene74956:CDS |
| GGAATGTGCTTAATCTGAAG+CGG | 0.619402 | 1.3:-76200111 | MS.gene74956:CDS |
| TGTAAAGAAAGCAGCTGTGG+AGG | 0.623964 | 1.3:-76199804 | MS.gene74956:CDS |
| TGGATGGAAGGACTTTCCAC+AGG | 0.627657 | 1.3:-76199858 | MS.gene74956:CDS |
| CATAGTCACTACTACTGGGA+CGG | 0.629627 | 1.3:+76198479 | None:intergenic |
| TGGACGTTAACAGAAGTGCT+TGG | 0.636239 | 1.3:-76200678 | MS.gene74956:intron |
| ACCAAATCAACAGCATCCTG+TGG | 0.639973 | 1.3:+76199842 | None:intergenic |
| GAAGATAGCAGTAATAACAT+GGG | 0.640382 | 1.3:-76199431 | MS.gene74956:CDS |
| GTTATTAGTGATGTACATTG+AGG | 0.640455 | 1.3:+76200034 | None:intergenic |
| TTACCCCTTCTCAAGTACAT+CGG | 0.645983 | 1.3:-76199255 | MS.gene74956:CDS |
| TCAAATAAACTGTACCAGTG+AGG | 0.646982 | 1.3:+76200255 | None:intergenic |
| GCACCGATGTACTTGAGAAG+GGG | 0.647364 | 1.3:+76199252 | None:intergenic |
| TGCATGCATTTAGATGCAGA+TGG | 0.653425 | 1.3:+76199089 | None:intergenic |
| TTGCTTGGATTGATGAGACA+GGG | 0.654779 | 1.3:-76199700 | MS.gene74956:CDS |
| CATGGAAGCAAACAACGGAA+AGG | 0.655703 | 1.3:-76200143 | MS.gene74956:CDS |
| TAGTGACTATGATAGTGGGG+TGG | 0.665276 | 1.3:-76198467 | MS.gene74956:CDS |
| TTGATGGTCTATCAAAATGG+TGG | 0.667750 | 1.3:-76199878 | MS.gene74956:CDS |
| ATTGTTCCAGTAGATAAACA+TGG | 0.675260 | 1.3:-76200161 | MS.gene74956:intron |
| TAGTAGTGACTATGATAGTG+GGG | 0.676289 | 1.3:-76198470 | MS.gene74956:CDS |
| ATAAACATGGAAGCAAACAA+CGG | 0.703722 | 1.3:-76200148 | MS.gene74956:CDS |
| AGAGAAGAGAATGTACAACA+TGG | 0.709333 | 1.3:-76200698 | MS.gene74956:CDS |
| AGTAGGTGCATCCAAGTTGG+GGG | 0.717707 | 1.3:-76199537 | MS.gene74956:CDS |
| ACTCTCGAAGACTCTGAACG+TGG | 0.722742 | 1.3:+76197937 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAAATTAAATTACATTT+AGG | - | chr1.3:76198026-76198045 | MS.gene74956:intron | 10.0% |
| !! | ATATAAAAAAAATTGAGAAT+AGG | + | chr1.3:76197285-76197304 | None:intergenic | 10.0% |
| !!! | AAATGTAATTTAATTTCATT+AGG | + | chr1.3:76198026-76198045 | None:intergenic | 10.0% |
| !!! | CAATTTTTTTTATATATTCA+GGG | - | chr1.3:76197290-76197309 | MS.gene74956:intron | 10.0% |
| !!! | TCAATTTTTTTTATATATTC+AGG | - | chr1.3:76197289-76197308 | MS.gene74956:intron | 10.0% |
| !! | CCATTCTTAAATAAAATAAT+TGG | + | chr1.3:76198726-76198745 | None:intergenic | 15.0% |
| !! | CTTATTATAATATTGGTATA+TGG | - | chr1.3:76199350-76199369 | MS.gene74956:CDS | 15.0% |
| !! | TAATATTATAGAACATTTCA+AGG | + | chr1.3:76198827-76198846 | None:intergenic | 15.0% |
| !!! | CCAATTATTTTATTTAAGAA+TGG | - | chr1.3:76198723-76198742 | MS.gene74956:intron | 15.0% |
| !!! | TACATTTTCTTAACAAAAAA+AGG | - | chr1.3:76199305-76199324 | MS.gene74956:CDS | 15.0% |
| !!! | TTTTTTACTGTTTTTTTATC+TGG | - | chr1.3:76199834-76199853 | MS.gene74956:CDS | 15.0% |
| !! | AAGAAAAAAATGGATAGAAT+AGG | + | chr1.3:76199333-76199352 | None:intergenic | 20.0% |
| !! | ACCGATGTATAAATAAATAA+GGG | + | chr1.3:76198889-76198908 | None:intergenic | 20.0% |
| !! | AGAATAGGTAACTAATATAT+AGG | + | chr1.3:76197270-76197289 | None:intergenic | 20.0% |
| !! | ATAAATAAATAAGGGGAAAA+AGG | + | chr1.3:76198881-76198900 | None:intergenic | 20.0% |
| !! | ATATGTCCTAATTGTTTAAA+TGG | - | chr1.3:76200431-76200450 | MS.gene74956:intron | 20.0% |
| !! | CATTTAGGAATTGAAATAAA+TGG | - | chr1.3:76198041-76198060 | MS.gene74956:intron | 20.0% |
| !! | GCATATAATGAAATTGTATA+TGG | - | chr1.3:76198245-76198264 | MS.gene74956:intron | 20.0% |
| !! | TATATGAATTATAAGAAGAG+CGG | - | chr1.3:76197687-76197706 | MS.gene74956:intron | 20.0% |
| !! | TCAAAACAAAATTTAAAAGC+AGG | + | chr1.3:76200627-76200646 | None:intergenic | 20.0% |
| !! | TTGAAACTAATAACAAATTC+TGG | + | chr1.3:76199222-76199241 | None:intergenic | 20.0% |
| !!! | ACAATCAATCTAAAATAGTT+TGG | + | chr1.3:76197172-76197191 | None:intergenic | 20.0% |
| !!! | AGAATTTGTTATTAGTTTCA+AGG | - | chr1.3:76199221-76199240 | MS.gene74956:CDS | 20.0% |
| !!! | AGTGGAAGAATAATATTTTT+GGG | - | chr1.3:76199608-76199627 | MS.gene74956:CDS | 20.0% |
| !!! | AGTTTATTTGAAACTTCTAA+AGG | - | chr1.3:76197358-76197377 | MS.gene74956:intron | 20.0% |
| !!! | ATGATTTTTTGAAAAAGTTG+AGG | - | chr1.3:76200184-76200203 | MS.gene74956:intron | 20.0% |
| !!! | TAACTAGTTGATATATGATT+CGG | - | chr1.3:76199396-76199415 | MS.gene74956:CDS | 20.0% |
| !!! | TATACTTTTATTTTGCTCAA+CGG | + | chr1.3:76198216-76198235 | None:intergenic | 20.0% |
| ! | AATAACTAGCACTGTAAATA+AGG | + | chr1.3:76199011-76199030 | None:intergenic | 25.0% |
| ! | AATATTGTTGAAGTTATCCT+AGG | - | chr1.3:76198634-76198653 | MS.gene74956:intron | 25.0% |
| ! | ATCAATTTGAACATGCTTAA+AGG | + | chr1.3:76198114-76198133 | None:intergenic | 25.0% |
| ! | ATGAAGCCATTTAAACAATT+AGG | + | chr1.3:76200440-76200459 | None:intergenic | 25.0% |
| ! | ATTGGTATATGGTACTTAAT+GGG | - | chr1.3:76199361-76199380 | MS.gene74956:CDS | 25.0% |
| ! | CACCGATGTATAAATAAATA+AGG | + | chr1.3:76198890-76198909 | None:intergenic | 25.0% |
| ! | CCGATGTATAAATAAATAAG+GGG | + | chr1.3:76198888-76198907 | None:intergenic | 25.0% |
| ! | CTGAAATTACGAAAAATTGT+CGG | - | chr1.3:76198402-76198421 | MS.gene74956:CDS | 25.0% |
| ! | TAGCAGTTTAAAGAAAAAAG+CGG | + | chr1.3:76197076-76197095 | None:intergenic | 25.0% |
| ! | TATTGGTATATGGTACTTAA+TGG | - | chr1.3:76199360-76199379 | MS.gene74956:CDS | 25.0% |
| ! | TCAAACATATGAGATTGAAA+GGG | - | chr1.3:76197607-76197626 | MS.gene74956:CDS | 25.0% |
| ! | TCTAGATTATTCGTTGTAAT+GGG | - | chr1.3:76198965-76198984 | MS.gene74956:intron | 25.0% |
| ! | TGAAATTACGAAAAATTGTC+GGG | - | chr1.3:76198403-76198422 | MS.gene74956:CDS | 25.0% |
| ! | TGAAATTGTATATGGAAAGT+TGG | - | chr1.3:76198253-76198272 | MS.gene74956:intron | 25.0% |
| ! | TTCAAAATCATTATGATTGC+AGG | + | chr1.3:76198147-76198166 | None:intergenic | 25.0% |
| ! | TTCCATACTAAAAAGTTTCT+TGG | + | chr1.3:76199174-76199193 | None:intergenic | 25.0% |
| ! | TTCTAGATTATTCGTTGTAA+TGG | - | chr1.3:76198964-76198983 | MS.gene74956:intron | 25.0% |
| ! | TTCTTTAAACTGCTAATGTT+AGG | - | chr1.3:76197081-76197100 | MS.gene74956:intron | 25.0% |
| !! | ATAATTGGTCTAGAAATCAA+AGG | + | chr1.3:76198711-76198730 | None:intergenic | 25.0% |
| !! | ATTTAATTTCATTAGGACCT+TGG | + | chr1.3:76198019-76198038 | None:intergenic | 25.0% |
| !! | CAATATTCACAGATTCATTT+TGG | + | chr1.3:76200585-76200604 | None:intergenic | 25.0% |
| !! | CCAATCAGTTTTTGAATTAT+GGG | - | chr1.3:76199909-76199928 | MS.gene74956:CDS | 25.0% |
| !! | CCCCTTATTTATTTATACAT+CGG | - | chr1.3:76198885-76198904 | MS.gene74956:intron | 25.0% |
| !! | GAGTGGAAGAATAATATTTT+TGG | - | chr1.3:76199607-76199626 | MS.gene74956:CDS | 25.0% |
| !! | GTTGAGCAAAATAAAAGTAT+AGG | - | chr1.3:76198215-76198234 | MS.gene74956:intron | 25.0% |
| !! | TATCAGATGAATTTGAAATC+TGG | - | chr1.3:76197864-76197883 | MS.gene74956:intron | 25.0% |
| !! | TCCAATCAGTTTTTGAATTA+TGG | - | chr1.3:76199908-76199927 | MS.gene74956:CDS | 25.0% |
| !! | TGTGAATATTGTTAGTTCTT+GGG | - | chr1.3:76200594-76200613 | MS.gene74956:intron | 25.0% |
| !!! | ATCCAAGAAACTTTTTAGTA+TGG | - | chr1.3:76199169-76199188 | MS.gene74956:CDS | 25.0% |
| !!! | ATCTAAAATAGTTTGGCTTT+CGG | + | chr1.3:76197165-76197184 | None:intergenic | 25.0% |
| !!! | ATTGTTTTATGTTAATCACC+AGG | - | chr1.3:76200143-76200162 | MS.gene74956:CDS | 25.0% |
| !!! | GCATTTCTTGATTTTTAGTT+TGG | - | chr1.3:76197021-76197040 | MS.gene74956:intron | 25.0% |
| !!! | GTGGAAGAATAATATTTTTG+GGG | - | chr1.3:76199609-76199628 | MS.gene74956:CDS | 25.0% |
| !!! | TATATCATGCGTTTTTTTAC+AGG | - | chr1.3:76199568-76199587 | MS.gene74956:CDS | 25.0% |
| !!! | TGTTTTTTTATCTGGAGTTT+TGG | - | chr1.3:76199842-76199861 | MS.gene74956:CDS | 25.0% |
| AAACAAGTTTCCAAAAGGAA+CGG | + | chr1.3:76199532-76199551 | None:intergenic | 30.0% | |
| AAATTACGAAAAATTGTCGG+GGG | - | chr1.3:76198405-76198424 | MS.gene74956:CDS | 30.0% | |
| AACAAATTCTGGATAGATGT+GGG | + | chr1.3:76199211-76199230 | None:intergenic | 30.0% | |
| ACTAATAACACCAAGAAACA+AGG | - | chr1.3:76197581-76197600 | MS.gene74956:CDS | 30.0% | |
| ATAAACATGGAAGCAAACAA+CGG | - | chr1.3:76197453-76197472 | MS.gene74956:intron | 30.0% | |
| ATATGACTCTCTGATTTCAT+TGG | + | chr1.3:76197645-76197664 | None:intergenic | 30.0% | |
| ATCATCTTGTGTGATCAAAA+TGG | - | chr1.3:76200475-76200494 | MS.gene74956:intron | 30.0% | |
| ATGAAATCAGAGAGTCATAT+TGG | - | chr1.3:76197645-76197664 | MS.gene74956:CDS | 30.0% | |
| ATTGTTCCAGTAGATAAACA+TGG | - | chr1.3:76197440-76197459 | MS.gene74956:intron | 30.0% | |
| CCCATAATTCAAAAACTGAT+TGG | + | chr1.3:76199912-76199931 | None:intergenic | 30.0% | |
| CTAAAAAGTTTCTTGGATTG+TGG | + | chr1.3:76199167-76199186 | None:intergenic | 30.0% | |
| GAAAGAAACAAGTTTCCAAA+AGG | + | chr1.3:76199537-76199556 | None:intergenic | 30.0% | |
| GAAATTACGAAAAATTGTCG+GGG | - | chr1.3:76198404-76198423 | MS.gene74956:CDS | 30.0% | |
| GAAGATAGCAGTAATAACAT+GGG | - | chr1.3:76198170-76198189 | MS.gene74956:intron | 30.0% | |
| GGAATTGAAATAAATGGAGT+AGG | - | chr1.3:76198047-76198066 | MS.gene74956:intron | 30.0% | |
| GTCAAACATATGAGATTGAA+AGG | - | chr1.3:76197606-76197625 | MS.gene74956:CDS | 30.0% | |
| GTGCAAAAGATGTTTCTTAA+GGG | - | chr1.3:76198287-76198306 | MS.gene74956:intron | 30.0% | |
| GTTATTAGTGATGTACATTG+AGG | + | chr1.3:76197570-76197589 | None:intergenic | 30.0% | |
| TAACAAATTCTGGATAGATG+TGG | + | chr1.3:76199212-76199231 | None:intergenic | 30.0% | |
| TACCAAATTTCCTTTGTGAA+AGG | - | chr1.3:76199735-76199754 | MS.gene74956:CDS | 30.0% | |
| TACCTACTATGATGAATTGT+GGG | - | chr1.3:76198474-76198493 | MS.gene74956:CDS | 30.0% | |
| TACTAATATATCTCTCTGCA+TGG | - | chr1.3:76198751-76198770 | MS.gene74956:intron | 30.0% | |
| TCACAAAGGAAATTTGGTAT+TGG | + | chr1.3:76199734-76199753 | None:intergenic | 30.0% | |
| TGAAGATAGCAGTAATAACA+TGG | - | chr1.3:76198169-76198188 | MS.gene74956:intron | 30.0% | |
| TGATGATTAGAAATTCAACC+TGG | + | chr1.3:76198579-76198598 | None:intergenic | 30.0% | |
| TGTATATGGAAAGTTGGATT+TGG | - | chr1.3:76198259-76198278 | MS.gene74956:intron | 30.0% | |
| TGTGCAAAAGATGTTTCTTA+AGG | - | chr1.3:76198286-76198305 | MS.gene74956:intron | 30.0% | |
| TTACCTACTATGATGAATTG+TGG | - | chr1.3:76198473-76198492 | MS.gene74956:CDS | 30.0% | |
| TTTGATCACACAAGATGATT+TGG | + | chr1.3:76200474-76200493 | None:intergenic | 30.0% | |
| ! | AATTTGATAGTTGTGTTGCA+TGG | - | chr1.3:76198849-76198868 | MS.gene74956:intron | 30.0% |
| ! | CTGTGAATATTGTTAGTTCT+TGG | - | chr1.3:76200593-76200612 | MS.gene74956:intron | 30.0% |
| ! | GAAATTTGGTATTGGAACTT+GGG | + | chr1.3:76199726-76199745 | None:intergenic | 30.0% |
| ! | TTTTGCTGCTATCATAAACA+AGG | - | chr1.3:76200000-76200019 | MS.gene74956:CDS | 30.0% |
| !! | ATTGATTGTTTTATCACGCA+TGG | - | chr1.3:76197183-76197202 | MS.gene74956:intron | 30.0% |
| !! | TCTAAAATAGTTTGGCTTTC+GGG | + | chr1.3:76197164-76197183 | None:intergenic | 30.0% |
| !!! | AGGCTTACTTTATTTTGTAC+GGG | - | chr1.3:76200505-76200524 | MS.gene74956:intron | 30.0% |
| !!! | GAGGCTTACTTTATTTTGTA+CGG | - | chr1.3:76200504-76200523 | MS.gene74956:intron | 30.0% |
| !!! | TTTTTTACAGGCCTTCTTTT+GGG | - | chr1.3:76199580-76199599 | MS.gene74956:CDS | 30.0% |
| !!! | TTTTTTTACAGGCCTTCTTT+TGG | - | chr1.3:76199579-76199598 | MS.gene74956:CDS | 30.0% |
| AAAAAGTTGAGGTCAGTTGT+GGG | - | chr1.3:76200195-76200214 | MS.gene74956:intron | 35.0% | |
| AAATAAGGGGAAAAAGGTTC+TGG | + | chr1.3:76198875-76198894 | None:intergenic | 35.0% | |
| AAATACACTGCCTTTCACAA+AGG | + | chr1.3:76199748-76199767 | None:intergenic | 35.0% | |
| AACATGCTTAAAGGTGACAT+TGG | + | chr1.3:76198105-76198124 | None:intergenic | 35.0% | |
| AAGATGTTTCTTAAGGGAAC+TGG | - | chr1.3:76198293-76198312 | MS.gene74956:intron | 35.0% | |
| AATTACGAAAAATTGTCGGG+GGG | - | chr1.3:76198406-76198425 | MS.gene74956:CDS | 35.0% | |
| ACCATGACATCAAGAATGTT+TGG | + | chr1.3:76197320-76197339 | None:intergenic | 35.0% | |
| ACTATCATAGTCACTACTAC+TGG | + | chr1.3:76199130-76199149 | None:intergenic | 35.0% | |
| AGAGAAGAGAATGTACAACA+TGG | - | chr1.3:76196903-76196922 | MS.gene74956:intron | 35.0% | |
| AGATATCAATTAAGACCGAG+AGG | + | chr1.3:76200108-76200127 | None:intergenic | 35.0% | |
| AGCAGTAATAACATGGGAAA+TGG | - | chr1.3:76198176-76198195 | MS.gene74956:intron | 35.0% | |
| AGTAGTAGTGACTATGATAG+TGG | - | chr1.3:76199129-76199148 | MS.gene74956:CDS | 35.0% | |
| ATAAGTTTCATATCCTCTGC+AGG | + | chr1.3:76200028-76200047 | None:intergenic | 35.0% | |
| ATGCTAATGTTCGATATGCT+TGG | - | chr1.3:76198429-76198448 | MS.gene74956:CDS | 35.0% | |
| ATTGCGATGTTGACGAAAAT+GGG | - | chr1.3:76199028-76199047 | MS.gene74956:intron | 35.0% | |
| CAAATAAACTGTACCAGTGA+GGG | + | chr1.3:76197348-76197367 | None:intergenic | 35.0% | |
| CCATATTCCCCATTATTACA+CGG | + | chr1.3:76199074-76199093 | None:intergenic | 35.0% | |
| CCTTTACACTTCAAACTTTG+CGG | - | chr1.3:76200535-76200554 | MS.gene74956:intron | 35.0% | |
| CTATCATAGTCACTACTACT+GGG | + | chr1.3:76199129-76199148 | None:intergenic | 35.0% | |
| GATATCAATTAAGACCGAGA+GGG | + | chr1.3:76200107-76200126 | None:intergenic | 35.0% | |
| GATGTACATTGAGGTAATAC+TGG | + | chr1.3:76197561-76197580 | None:intergenic | 35.0% | |
| GTAGTAGTGACTATGATAGT+GGG | - | chr1.3:76199130-76199149 | MS.gene74956:CDS | 35.0% | |
| GTATGTTCCATGTCAAAAAC+AGG | + | chr1.3:76200656-76200675 | None:intergenic | 35.0% | |
| GTGATCAAAATGGAATCTTG+AGG | - | chr1.3:76200485-76200504 | MS.gene74956:intron | 35.0% | |
| TAGAAATTCAACCTGGCAAA+AGG | + | chr1.3:76198572-76198591 | None:intergenic | 35.0% | |
| TATTGCGATGTTGACGAAAA+TGG | - | chr1.3:76199027-76199046 | MS.gene74956:intron | 35.0% | |
| TCAAATAAACTGTACCAGTG+AGG | + | chr1.3:76197349-76197368 | None:intergenic | 35.0% | |
| TCCAAACATTCTTGATGTCA+TGG | - | chr1.3:76197316-76197335 | MS.gene74956:intron | 35.0% | |
| TGCCTTTCACAAAGGAAATT+TGG | + | chr1.3:76199740-76199759 | None:intergenic | 35.0% | |
| TTAAATAGAGGGGGAAACTT+TGG | + | chr1.3:76200367-76200386 | None:intergenic | 35.0% | |
| TTGAATTATGGGATACCTCA+GGG | - | chr1.3:76199920-76199939 | MS.gene74956:CDS | 35.0% | |
| TTGCTTCCATGTTTATCTAC+TGG | + | chr1.3:76197449-76197468 | None:intergenic | 35.0% | |
| TTGGTCTAGAAATCAAAGGA+AGG | + | chr1.3:76198707-76198726 | None:intergenic | 35.0% | |
| TTTGAATTATGGGATACCTC+AGG | - | chr1.3:76199919-76199938 | MS.gene74956:CDS | 35.0% | |
| ! | ATTATGATTGCAGGCTTGTT+TGG | + | chr1.3:76198138-76198157 | None:intergenic | 35.0% |
| ! | CGTTTGATGGTCTATCAAAA+TGG | - | chr1.3:76197720-76197739 | MS.gene74956:intron | 35.0% |
| ! | GGAAATTTGGTATTGGAACT+TGG | + | chr1.3:76199727-76199746 | None:intergenic | 35.0% |
| ! | GTCTTTTGCCGTGTAATAAT+GGG | - | chr1.3:76199063-76199082 | MS.gene74956:CDS | 35.0% |
| ! | TAGTAGTGACTATGATAGTG+GGG | - | chr1.3:76199131-76199150 | MS.gene74956:CDS | 35.0% |
| ! | TCTTTTGCCGTGTAATAATG+GGG | - | chr1.3:76199064-76199083 | MS.gene74956:CDS | 35.0% |
| ! | TGTTTGACAACCTTGTTTCT+TGG | + | chr1.3:76197594-76197613 | None:intergenic | 35.0% |
| ! | TTGATGGTCTATCAAAATGG+TGG | - | chr1.3:76197723-76197742 | MS.gene74956:intron | 35.0% |
| !! | AACACAAGGTACTTTTCTCA+AGG | - | chr1.3:76200256-76200275 | MS.gene74956:intron | 35.0% |
| !! | GTAATGTAAACTAGCTTTGC+TGG | - | chr1.3:76200077-76200096 | MS.gene74956:CDS | 35.0% |
| !! | TTCGTTGTAATGGGTAGAAA+AGG | - | chr1.3:76198974-76198993 | MS.gene74956:intron | 35.0% |
| !!! | AGGCTTTGATTTTTTCTGCA+AGG | - | chr1.3:76200276-76200295 | MS.gene74956:CDS | 35.0% |
| !!! | GGCTTACTTTATTTTGTACG+GGG | - | chr1.3:76200506-76200525 | MS.gene74956:intron | 35.0% |
| !!! | TTACTTTATTTTGTACGGGG+AGG | - | chr1.3:76200509-76200528 | MS.gene74956:intron | 35.0% |
| AAAAGTCCAGCACAAGATGA+TGG | + | chr1.3:76197836-76197855 | None:intergenic | 40.0% | |
| AACACGACAAATTCAAGCCT+AGG | + | chr1.3:76198654-76198673 | None:intergenic | 40.0% | |
| ACTATGATGAATTGTGGGCT+TGG | - | chr1.3:76198479-76198498 | MS.gene74956:CDS | 40.0% | |
| AGAGTCCAGCGTTAAATAGA+GGG | + | chr1.3:76200378-76200397 | None:intergenic | 40.0% | |
| AGCCCACAATTCATCATAGT+AGG | + | chr1.3:76198479-76198498 | None:intergenic | 40.0% | |
| AGTAGCATGTTTCACCTTCT+TGG | - | chr1.3:76197115-76197134 | MS.gene74956:intron | 40.0% | |
| ATATGTACCATCTGCACTTC+AGG | - | chr1.3:76200050-76200069 | MS.gene74956:CDS | 40.0% | |
| ATTGCTTGGATTGATGAGAC+AGG | - | chr1.3:76197900-76197919 | MS.gene74956:intron | 40.0% | |
| CATAGTAGGTAACTCTCCTT+TGG | + | chr1.3:76198465-76198484 | None:intergenic | 40.0% | |
| CGGAAGCAGCATAAATTTCA+GGG | + | chr1.3:76197938-76197957 | None:intergenic | 40.0% | |
| GAAAAAGTTGAGGTCAGTTG+TGG | - | chr1.3:76200194-76200213 | MS.gene74956:intron | 40.0% | |
| GATAGACCATCAAACGTTCT+GGG | + | chr1.3:76197716-76197735 | None:intergenic | 40.0% | |
| GATGAAACCATCCATCCAAA+TGG | + | chr1.3:76199428-76199447 | None:intergenic | 40.0% | |
| GGAATGTGCTTAATCTGAAG+CGG | - | chr1.3:76197490-76197509 | MS.gene74956:intron | 40.0% | |
| GGTCATGAATCTTTGTTCCA+AGG | - | chr1.3:76197999-76198018 | MS.gene74956:CDS | 40.0% | |
| GTCTCATCAATCCAAGCAAT+AGG | + | chr1.3:76197900-76197919 | None:intergenic | 40.0% | |
| GTTTGCAACAACCTATTGCT+TGG | - | chr1.3:76197886-76197905 | MS.gene74956:intron | 40.0% | |
| TAAAGGACCAGAGTTCTGTT+TGG | - | chr1.3:76197375-76197394 | MS.gene74956:CDS | 40.0% | |
| TAGAGTCCAGCGTTAAATAG+AGG | + | chr1.3:76200379-76200398 | None:intergenic | 40.0% | |
| TATGTACCATCTGCACTTCA+GGG | - | chr1.3:76200051-76200070 | MS.gene74956:CDS | 40.0% | |
| TCCTGATTGCAGAGATCATA+AGG | + | chr1.3:76197969-76197988 | None:intergenic | 40.0% | |
| TCGGAAGCAGCATAAATTTC+AGG | + | chr1.3:76197939-76197958 | None:intergenic | 40.0% | |
| TCTAAATGCATGCATGGCAT+TGG | - | chr1.3:76198521-76198540 | MS.gene74956:CDS | 40.0% | |
| TCTGCATCTAAATGCATGCA+TGG | - | chr1.3:76198515-76198534 | MS.gene74956:CDS | 40.0% | |
| TGAAGTGCAGATGGTACATA+TGG | + | chr1.3:76200051-76200070 | None:intergenic | 40.0% | |
| TGATAGACCATCAAACGTTC+TGG | + | chr1.3:76197717-76197736 | None:intergenic | 40.0% | |
| TGATGTAAAGAAAGCAGCTG+TGG | - | chr1.3:76197794-76197813 | MS.gene74956:intron | 40.0% | |
| TGCATGCATTTAGATGCAGA+TGG | + | chr1.3:76198515-76198534 | None:intergenic | 40.0% | |
| TTACCCCTTCTCAAGTACAT+CGG | - | chr1.3:76198346-76198365 | MS.gene74956:intron | 40.0% | |
| TTGCGATGTTGACGAAAATG+GGG | - | chr1.3:76199029-76199048 | MS.gene74956:intron | 40.0% | |
| TTGCTTGGATTGATGAGACA+GGG | - | chr1.3:76197901-76197920 | MS.gene74956:intron | 40.0% | |
| ! | AAACAGCAAGTATTGCCTCA+AGG | + | chr1.3:76200324-76200343 | None:intergenic | 40.0% |
| ! | AACATGGGAAATGGAAGTGT+TGG | - | chr1.3:76198185-76198204 | MS.gene74956:intron | 40.0% |
| ! | AGTAGGCACTGTAAGTTCTT+TGG | - | chr1.3:76199684-76199703 | MS.gene74956:CDS | 40.0% |
| ! | ATATTGGACGATCGTTGGTT+AGG | - | chr1.3:76197661-76197680 | MS.gene74956:CDS | 40.0% |
| ! | ATTTATGCTGCTTCCGATGA+AGG | - | chr1.3:76197942-76197961 | MS.gene74956:CDS | 40.0% |
| ! | CCGCAAAGTTTGAAGTGTAA+AGG | + | chr1.3:76200538-76200557 | None:intergenic | 40.0% |
| ! | CCGTGTAATAATGGGGAATA+TGG | - | chr1.3:76199071-76199090 | MS.gene74956:CDS | 40.0% |
| ! | CGTCTTTTGCCGTGTAATAA+TGG | - | chr1.3:76199062-76199081 | MS.gene74956:CDS | 40.0% |
| ! | CTTAAGGGAACTGGTAGTTT+TGG | - | chr1.3:76198302-76198321 | MS.gene74956:intron | 40.0% |
| ! | GATGGTTTCATCTTCTGGTT+GGG | - | chr1.3:76199436-76199455 | MS.gene74956:CDS | 40.0% |
| ! | GCAGCAAAAAGCGTAGAAAA+AGG | + | chr1.3:76199989-76200008 | None:intergenic | 40.0% |
| ! | TCTGAACGTGGCAAGATTTT+AGG | + | chr1.3:76199655-76199674 | None:intergenic | 40.0% |
| ! | TGGTCTATCAAAATGGTGGA+TGG | - | chr1.3:76197727-76197746 | MS.gene74956:intron | 40.0% |
| ! | TTTATGCTGCTTCCGATGAA+GGG | - | chr1.3:76197943-76197962 | MS.gene74956:CDS | 40.0% |
| !! | AGGATGCTGTTGATTTGGTT+AGG | - | chr1.3:76197763-76197782 | MS.gene74956:intron | 40.0% |
| !! | ATGATTCGGTTCACTCCATT+TGG | - | chr1.3:76199410-76199429 | MS.gene74956:CDS | 40.0% |
| !! | CAAAAGTACTGTCTCCAAGA+AGG | + | chr1.3:76197132-76197151 | None:intergenic | 40.0% |
| !! | CTATCAAAATGGTGGATGGA+AGG | - | chr1.3:76197731-76197750 | MS.gene74956:intron | 40.0% |
| !! | GTACTTAATGGGTTGATCAG+AGG | - | chr1.3:76199372-76199391 | MS.gene74956:CDS | 40.0% |
| !!! | ATCGCATCCTGTTTTTGACA+TGG | - | chr1.3:76200646-76200665 | MS.gene74956:intron | 40.0% |
| AAATGGCCATCATCTTGTGC+TGG | - | chr1.3:76197827-76197846 | MS.gene74956:intron | 45.0% | |
| AAGGTCTCTTCTGATGCTGA+AGG | - | chr1.3:76199240-76199259 | MS.gene74956:CDS | 45.0% | |
| AATATGGAGCTTCTCCATCC+TGG | - | chr1.3:76199087-76199106 | MS.gene74956:CDS | 45.0% | |
| ACCAAATCAACAGCATCCTG+TGG | + | chr1.3:76197762-76197781 | None:intergenic | 45.0% | |
| ACCTTGTGTTGAAGAAGACC+AGG | + | chr1.3:76200246-76200265 | None:intergenic | 45.0% | |
| AGTCCAGCGTTAAATAGAGG+GGG | + | chr1.3:76200376-76200395 | None:intergenic | 45.0% | |
| ATACCTCAGGGAATTCCAAC+TGG | - | chr1.3:76199932-76199951 | MS.gene74956:CDS | 45.0% | |
| ATTCAACCTGGCAAAAGGAC+AGG | + | chr1.3:76198567-76198586 | None:intergenic | 45.0% | |
| CATAAACAAGGTTCCTGCAG+AGG | - | chr1.3:76200012-76200031 | MS.gene74956:CDS | 45.0% | |
| CATAGTCACTACTACTGGGA+CGG | + | chr1.3:76199125-76199144 | None:intergenic | 45.0% | |
| CATGGAAGCAAACAACGGAA+AGG | - | chr1.3:76197458-76197477 | MS.gene74956:intron | 45.0% | |
| CTGCGGTTATTTATGCCTTG+AGG | - | chr1.3:76200306-76200325 | MS.gene74956:intron | 45.0% | |
| GAGATCATAAGGCCCTTCAT+CGG | + | chr1.3:76197958-76197977 | None:intergenic | 45.0% | |
| GAGTCATATTGGACGATCGT+TGG | - | chr1.3:76197656-76197675 | MS.gene74956:CDS | 45.0% | |
| GAGTCCAGCGTTAAATAGAG+GGG | + | chr1.3:76200377-76200396 | None:intergenic | 45.0% | |
| GCCTTATGATCTCTGCAATC+AGG | - | chr1.3:76197965-76197984 | MS.gene74956:CDS | 45.0% | |
| GCTGTGGAGGTAGAGTTAAA+TGG | - | chr1.3:76197810-76197829 | MS.gene74956:intron | 45.0% | |
| GGATGGATGGTTTCATCTTC+TGG | - | chr1.3:76199431-76199450 | MS.gene74956:CDS | 45.0% | |
| GGATGGTTTCATCTTCTGGT+TGG | - | chr1.3:76199435-76199454 | MS.gene74956:CDS | 45.0% | |
| GTTCACTCCATTTGGATGGA+TGG | - | chr1.3:76199418-76199437 | MS.gene74956:CDS | 45.0% | |
| TAACGCTGGACTCTAGTGAA+GGG | - | chr1.3:76200384-76200403 | MS.gene74956:intron | 45.0% | |
| TACATACCCTGAAGTGCAGA+TGG | + | chr1.3:76200060-76200079 | None:intergenic | 45.0% | |
| TCCACTCACATCCCAAAAGA+AGG | + | chr1.3:76199594-76199613 | None:intergenic | 45.0% | |
| TGAAGGGTTTATCTGCTGTG+TGG | - | chr1.3:76200400-76200419 | MS.gene74956:intron | 45.0% | |
| TGCAATCAGGACAGCAGAAA+AGG | - | chr1.3:76197978-76197997 | MS.gene74956:CDS | 45.0% | |
| TGTAAAGAAAGCAGCTGTGG+AGG | - | chr1.3:76197797-76197816 | MS.gene74956:intron | 45.0% | |
| TTAACGCTGGACTCTAGTGA+AGG | - | chr1.3:76200383-76200402 | MS.gene74956:intron | 45.0% | |
| TTCGGTTCACTCCATTTGGA+TGG | - | chr1.3:76199414-76199433 | MS.gene74956:CDS | 45.0% | |
| TTTCCCCCTCTATTTAACGC+TGG | - | chr1.3:76200370-76200389 | MS.gene74956:intron | 45.0% | |
| ! | ACCTGGTCTTCTTCAACACA+AGG | - | chr1.3:76200242-76200261 | MS.gene74956:intron | 45.0% |
| ! | TCCACAGGATGCTGTTGATT+TGG | - | chr1.3:76197758-76197777 | MS.gene74956:intron | 45.0% |
| ! | TGCACCGATGTACTTGAGAA+GGG | + | chr1.3:76198353-76198372 | None:intergenic | 45.0% |
| !! | TAGTGACTATGATAGTGGGG+TGG | - | chr1.3:76199134-76199153 | MS.gene74956:CDS | 45.0% |
| !! | TGGACGTTAACAGAAGTGCT+TGG | - | chr1.3:76196923-76196942 | MS.gene74956:intron | 45.0% |
| !! | TTTGTGAGTGCCGTTCCTTT+TGG | - | chr1.3:76199519-76199538 | MS.gene74956:CDS | 45.0% |
| !!! | CACGAGTCATCTTTTTTGCC+TGG | + | chr1.3:76200164-76200183 | None:intergenic | 45.0% |
| !!! | GTGGCAAGATTTTAGGACCA+TGG | + | chr1.3:76199648-76199667 | None:intergenic | 45.0% |
| !! | ATATTATAATAAGAAAAAAA+TGG | + | chr1.3:76199343-76199362 | None:intergenic | 5.0% |
| !!! | TTTTTTTCTTATTATAATAT+TGG | - | chr1.3:76199343-76199362 | MS.gene74956:CDS | 5.0% |
| AAACTGTACCAGTGAGGGTG+TGG | + | chr1.3:76197343-76197362 | None:intergenic | 50.0% | |
| ACTCTCGAAGACTCTGAACG+TGG | + | chr1.3:76199667-76199686 | None:intergenic | 50.0% | |
| AGCGTAGAAAAAGGCAACCG+AGG | + | chr1.3:76199980-76199999 | None:intergenic | 50.0% | |
| CGTAGAAAAAGGCAACCGAG+GGG | + | chr1.3:76199978-76199997 | None:intergenic | 50.0% | |
| CGTTCAGAGTCTTCGAGAGT+AGG | - | chr1.3:76199667-76199686 | MS.gene74956:CDS | 50.0% | |
| CTCTTGCGAGCTACATTACC+TGG | - | chr1.3:76200225-76200244 | MS.gene74956:intron | 50.0% | |
| CTGAAGCTTCAACATCCCCT+CGG | - | chr1.3:76199960-76199979 | MS.gene74956:CDS | 50.0% | |
| GAACCAGTTGGAATTCCCTG+AGG | + | chr1.3:76199938-76199957 | None:intergenic | 50.0% | |
| GAGTAGGTGCATCCAAGTTG+GGG | - | chr1.3:76198063-76198082 | MS.gene74956:intron | 50.0% | |
| GCAGCAACCAAACAGAACTC+TGG | + | chr1.3:76197385-76197404 | None:intergenic | 50.0% | |
| GCGTAGAAAAAGGCAACCGA+GGG | + | chr1.3:76199979-76199998 | None:intergenic | 50.0% | |
| GGAGTAGGTGCATCCAAGTT+GGG | - | chr1.3:76198062-76198081 | MS.gene74956:intron | 50.0% | |
| GGGGTTAATTCAGCTAGCCA+TGG | - | chr1.3:76199628-76199647 | MS.gene74956:CDS | 50.0% | |
| TGGAGTAGGTGCATCCAAGT+TGG | - | chr1.3:76198061-76198080 | MS.gene74956:intron | 50.0% | |
| TGGATGGAAGGACTTTCCAC+AGG | - | chr1.3:76197743-76197762 | MS.gene74956:intron | 50.0% | |
| TTCTGCAAGGTCTTCTGCTG+CGG | - | chr1.3:76200289-76200308 | MS.gene74956:CDS | 50.0% | |
| ! | AGTAGGTGCATCCAAGTTGG+GGG | - | chr1.3:76198064-76198083 | MS.gene74956:intron | 50.0% |
| ! | CAAGTTGGGGGAGTGTATTG+GGG | - | chr1.3:76198076-76198095 | MS.gene74956:intron | 50.0% |
| ! | CCAAGTTGGGGGAGTGTATT+GGG | - | chr1.3:76198075-76198094 | MS.gene74956:intron | 50.0% |
| ! | CTGCACCGATGTACTTGAGA+AGG | + | chr1.3:76198354-76198373 | None:intergenic | 50.0% |
| ! | GCACCGATGTACTTGAGAAG+GGG | + | chr1.3:76198352-76198371 | None:intergenic | 50.0% |
| ! | TCCAAGTTGGGGGAGTGTAT+TGG | - | chr1.3:76198074-76198093 | MS.gene74956:intron | 50.0% |
| !! | ACAACGGAAAGGCGTCTAAC+AGG | - | chr1.3:76197469-76197488 | MS.gene74956:intron | 50.0% |
| !! | GCTTGGCTTGCTTCTTCCAA+AGG | - | chr1.3:76198446-76198465 | MS.gene74956:CDS | 50.0% |
| !!! | GCCTTCTTTTGGGATGTGAG+TGG | - | chr1.3:76199590-76199609 | MS.gene74956:CDS | 50.0% |
| CCCAATACACTCCCCCAACT+TGG | + | chr1.3:76198078-76198097 | None:intergenic | 55.0% | |
| CGAGGGGATGTTGAAGCTTC+AGG | + | chr1.3:76199962-76199981 | None:intergenic | 55.0% | |
| CGGAAGCCCAGAACGTTTGA+TGG | - | chr1.3:76197707-76197726 | MS.gene74956:intron | 55.0% | |
| GAAGCTTCAGGCGAACCAGT+TGG | + | chr1.3:76199950-76199969 | None:intergenic | 55.0% | |
| GCTTTGCTGGATGTCCCTCT+CGG | - | chr1.3:76200090-76200109 | MS.gene74956:CDS | 55.0% | |
| GGTACTGTCTAGTGCCAGGA+TGG | + | chr1.3:76199104-76199123 | None:intergenic | 55.0% | |
| TACATCGGTGCAGTCGCGAT+TGG | - | chr1.3:76198361-76198380 | MS.gene74956:intron | 55.0% | |
| ! | CTGCTACCTGTCCTTTTGCC+AGG | - | chr1.3:76198558-76198577 | MS.gene74956:CDS | 55.0% |
| GGACGGTACTGTCTAGTGCC+AGG | + | chr1.3:76199108-76199127 | None:intergenic | 60.0% | |
| GTCATGGTCCACACCCTCAC+TGG | - | chr1.3:76197332-76197351 | MS.gene74956:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 76196880 | 76200743 | 76196880 | ID=MS.gene74956 |
| chr1.3 | mRNA | 76196880 | 76200743 | 76196880 | ID=MS.gene74956.t1;Parent=MS.gene74956 |
| chr1.3 | exon | 76200679 | 76200743 | 76200679 | ID=MS.gene74956.t1.exon1;Parent=MS.gene74956.t1 |
| chr1.3 | CDS | 76200679 | 76200743 | 76200679 | ID=cds.MS.gene74956.t1;Parent=MS.gene74956.t1 |
| chr1.3 | exon | 76200270 | 76200312 | 76200270 | ID=MS.gene74956.t1.exon2;Parent=MS.gene74956.t1 |
| chr1.3 | CDS | 76200270 | 76200312 | 76200270 | ID=cds.MS.gene74956.t1;Parent=MS.gene74956.t1 |
| chr1.3 | exon | 76199044 | 76200170 | 76199044 | ID=MS.gene74956.t1.exon3;Parent=MS.gene74956.t1 |
| chr1.3 | CDS | 76199044 | 76200170 | 76199044 | ID=cds.MS.gene74956.t1;Parent=MS.gene74956.t1 |
| chr1.3 | exon | 76198362 | 76198603 | 76198362 | ID=MS.gene74956.t1.exon4;Parent=MS.gene74956.t1 |
| chr1.3 | CDS | 76198362 | 76198603 | 76198362 | ID=cds.MS.gene74956.t1;Parent=MS.gene74956.t1 |
| chr1.3 | exon | 76197930 | 76198033 | 76197930 | ID=MS.gene74956.t1.exon5;Parent=MS.gene74956.t1 |
| chr1.3 | CDS | 76197930 | 76198033 | 76197930 | ID=cds.MS.gene74956.t1;Parent=MS.gene74956.t1 |
| chr1.3 | exon | 76197551 | 76197682 | 76197551 | ID=MS.gene74956.t1.exon6;Parent=MS.gene74956.t1 |
| chr1.3 | CDS | 76197551 | 76197682 | 76197551 | ID=cds.MS.gene74956.t1;Parent=MS.gene74956.t1 |
| chr1.3 | exon | 76197360 | 76197458 | 76197360 | ID=MS.gene74956.t1.exon7;Parent=MS.gene74956.t1 |
| chr1.3 | CDS | 76197360 | 76197458 | 76197360 | ID=cds.MS.gene74956.t1;Parent=MS.gene74956.t1 |
| chr1.3 | exon | 76196880 | 76196900 | 76196880 | ID=MS.gene74956.t1.exon8;Parent=MS.gene74956.t1 |
| chr1.3 | CDS | 76196880 | 76196900 | 76196880 | ID=cds.MS.gene74956.t1;Parent=MS.gene74956.t1 |
| Gene Sequence |
| Protein sequence |
