Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046409.t1 | XP_003613057.1 | 95.5 | 573 | 26 | 0 | 1 | 573 | 1 | 573 | 0.00E+00 | 1101.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046409.t1 | Q8RY59 | 41.7 | 566 | 298 | 14 | 17 | 563 | 21 | 573 | 8.9e-107 | 389.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046409.t1 | G7JWF4 | 95.5 | 573 | 26 | 0 | 1 | 573 | 1 | 573 | 0.0e+00 | 1101.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070621 | MS.gene046409 | PPI |
| MS.gene79552 | MS.gene046409 | PPI |
| MS.gene046409 | MS.gene001066 | PPI |
| MS.gene046409 | MS.gene021778 | PPI |
| MS.gene046409 | MS.gene029308 | PPI |
| MS.gene34237 | MS.gene046409 | PPI |
| MS.gene76207 | MS.gene046409 | PPI |
| MS.gene007901 | MS.gene046409 | PPI |
| MS.gene74956 | MS.gene046409 | PPI |
| MS.gene046409 | MS.gene046455 | PPI |
| MS.gene057563 | MS.gene046409 | PPI |
| MS.gene032270 | MS.gene046409 | PPI |
| MS.gene046444 | MS.gene046409 | PPI |
| MS.gene046409 | MS.gene027783 | PPI |
| MS.gene36039 | MS.gene046409 | PPI |
| MS.gene070678 | MS.gene046409 | PPI |
| MS.gene046409 | MS.gene069103 | PPI |
| MS.gene065039 | MS.gene046409 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046409.t1 | MTR_5g032190 | 95.462 | 573 | 26 | 0 | 1 | 573 | 1 | 573 | 0.0 | 1146 |
| MS.gene046409.t1 | MTR_5g032190 | 95.228 | 482 | 23 | 0 | 1 | 482 | 1 | 482 | 0.0 | 964 |
| MS.gene046409.t1 | MTR_5g032190 | 95.168 | 476 | 23 | 0 | 1 | 476 | 1 | 476 | 0.0 | 953 |
| MS.gene046409.t1 | MTR_1g112330 | 78.421 | 570 | 114 | 4 | 1 | 562 | 1 | 569 | 0.0 | 903 |
| MS.gene046409.t1 | MTR_1g112330 | 78.070 | 570 | 113 | 5 | 1 | 562 | 1 | 566 | 0.0 | 894 |
| MS.gene046409.t1 | MTR_1g112330 | 82.418 | 455 | 73 | 2 | 1 | 448 | 1 | 455 | 0.0 | 774 |
| MS.gene046409.t1 | MTR_7g011550 | 46.032 | 567 | 267 | 9 | 1 | 561 | 1 | 534 | 5.85e-157 | 460 |
| MS.gene046409.t1 | MTR_5g029580 | 44.615 | 325 | 166 | 5 | 234 | 553 | 27 | 342 | 5.92e-88 | 276 |
| MS.gene046409.t1 | MTR_3g077870 | 31.077 | 325 | 172 | 8 | 233 | 549 | 23 | 303 | 6.04e-39 | 145 |
| MS.gene046409.t1 | MTR_4g105740 | 31.333 | 300 | 160 | 8 | 266 | 560 | 46 | 304 | 7.55e-38 | 142 |
| MS.gene046409.t1 | MTR_4g105740 | 31.438 | 299 | 159 | 8 | 266 | 559 | 46 | 303 | 1.16e-37 | 142 |
| MS.gene046409.t1 | MTR_8g088250 | 28.136 | 295 | 160 | 6 | 270 | 553 | 26 | 279 | 1.45e-30 | 121 |
| MS.gene046409.t1 | MTR_2g090130 | 42.000 | 150 | 50 | 2 | 271 | 418 | 103 | 217 | 1.42e-29 | 116 |
| MS.gene046409.t1 | MTR_2g090130 | 59.016 | 61 | 25 | 0 | 101 | 161 | 43 | 103 | 8.93e-20 | 88.6 |
| MS.gene046409.t1 | MTR_7g011640 | 50.450 | 111 | 34 | 3 | 101 | 210 | 15 | 105 | 3.87e-23 | 96.3 |
| MS.gene046409.t1 | MTR_7g011880 | 35.032 | 157 | 73 | 4 | 376 | 531 | 58 | 186 | 4.63e-19 | 85.9 |
| MS.gene046409.t1 | MTR_7g061850 | 40.625 | 96 | 52 | 2 | 235 | 325 | 28 | 123 | 2.37e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046409.t1 | AT1G32230 | 41.667 | 564 | 294 | 13 | 17 | 560 | 21 | 569 | 6.55e-136 | 407 |
| MS.gene046409.t1 | AT1G32230 | 41.623 | 567 | 296 | 13 | 17 | 563 | 21 | 572 | 1.01e-135 | 407 |
| MS.gene046409.t1 | AT1G32230 | 41.623 | 567 | 296 | 13 | 17 | 563 | 21 | 572 | 1.01e-135 | 407 |
| MS.gene046409.t1 | AT1G32230 | 41.623 | 567 | 296 | 13 | 17 | 563 | 21 | 572 | 1.01e-135 | 407 |
| MS.gene046409.t1 | AT1G32230 | 41.623 | 567 | 296 | 13 | 17 | 563 | 21 | 572 | 1.01e-135 | 407 |
| MS.gene046409.t1 | AT1G32230 | 41.828 | 569 | 293 | 15 | 17 | 563 | 21 | 573 | 4.51e-135 | 406 |
| MS.gene046409.t1 | AT2G35510 | 39.619 | 578 | 320 | 11 | 1 | 560 | 1 | 567 | 4.15e-124 | 377 |
| MS.gene046409.t1 | AT2G35510 | 39.619 | 578 | 320 | 11 | 1 | 560 | 1 | 567 | 4.15e-124 | 377 |
| MS.gene046409.t1 | AT2G35510 | 40.959 | 459 | 252 | 8 | 1 | 448 | 1 | 451 | 1.60e-107 | 330 |
| MS.gene046409.t1 | AT1G70440 | 28.190 | 337 | 190 | 8 | 226 | 550 | 2 | 298 | 1.88e-38 | 144 |
| MS.gene046409.t1 | AT1G70440 | 28.190 | 337 | 190 | 8 | 226 | 550 | 2 | 298 | 1.88e-38 | 144 |
| MS.gene046409.t1 | AT1G23550 | 33.333 | 237 | 117 | 5 | 316 | 548 | 109 | 308 | 1.08e-36 | 139 |
| MS.gene046409.t1 | AT5G62520 | 29.644 | 253 | 130 | 5 | 301 | 549 | 89 | 297 | 1.26e-26 | 110 |
| MS.gene046409.t1 | AT3G47720 | 26.667 | 270 | 136 | 7 | 292 | 550 | 85 | 303 | 6.41e-23 | 100 |
| MS.gene046409.t1 | AT5G62520 | 33.562 | 146 | 88 | 3 | 301 | 442 | 89 | 229 | 3.34e-20 | 90.5 |
Find 126 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGTGATATTGACGAAAA+TGG | 0.188994 | 5.1:+22368336 | MS.gene046409:CDS |
| TCAGAATCAGCATAAATTTC+AGG | 0.192300 | 5.1:-22367254 | None:intergenic |
| TGTTTGACAACTTCGTTTCT+TGG | 0.207598 | 5.1:-22366909 | None:intergenic |
| CATTTAGAAATTGAAATAAA+TGG | 0.220833 | 5.1:+22367359 | MS.gene046409:CDS |
| ATATGCATTATCTGCAATTC+AGG | 0.249387 | 5.1:+22369940 | MS.gene046409:CDS |
| ATTTAATATCATTAGGATCT+TGG | 0.284189 | 5.1:-22367334 | None:intergenic |
| TTGAAACTAACAACATATTC+TGG | 0.302685 | 5.1:-22368528 | None:intergenic |
| TCATCTCCCAATACTTAATA+AGG | 0.303795 | 5.1:-22370352 | None:intergenic |
| TGATAGACCATCAAACGTTC+TGG | 0.315101 | 5.1:-22367032 | None:intergenic |
| TTCTCCACTATCCTGATTGC+AGG | 0.320979 | 5.1:-22367294 | None:intergenic |
| CAAGGTTTCTGCGAAGGATA+TGG | 0.322660 | 5.1:+22369908 | MS.gene046409:CDS |
| CCGTGTAATAATGGGGAATA+TGG | 0.323010 | 5.1:+22368380 | MS.gene046409:CDS |
| AGAAAAGTACCTTGCTTTGA+AGG | 0.336075 | 5.1:-22370196 | None:intergenic |
| TGTATATGGAAGGTTGGATT+TGG | 0.339592 | 5.1:+22367556 | MS.gene046409:CDS |
| GTTGGTAGTGCAGTTGTATA+TGG | 0.343580 | 5.1:+22367542 | MS.gene046409:CDS |
| AAATGTAATTTAATATCATT+AGG | 0.344899 | 5.1:-22367341 | None:intergenic |
| ACCATCTCGTGTGATCAAAA+TGG | 0.346697 | 5.1:+22370327 | MS.gene046409:CDS |
| ATCCAAGATACTATATAGTA+TGG | 0.349263 | 5.1:+22368478 | MS.gene046409:CDS |
| TGTACAGAAGATGTTTCTTA+AGG | 0.349580 | 5.1:+22367583 | MS.gene046409:CDS |
| ATTGTGATATTGACGAAAAT+GGG | 0.350719 | 5.1:+22368337 | MS.gene046409:CDS |
| CTGGTAATTACCAGGCAAAA+AGG | 0.353126 | 5.1:+22370096 | MS.gene046409:intron |
| TATCAGATGAATTTGAAATC+TGG | 0.365305 | 5.1:+22367182 | MS.gene046409:CDS |
| TTCCATACTATATAGTATCT+TGG | 0.367221 | 5.1:-22368480 | None:intergenic |
| AGAATATGTTGTTAGTTTCA+AGG | 0.376305 | 5.1:+22368530 | MS.gene046409:CDS |
| GCTTGGCTTGCTTCTTCTAA+AGG | 0.378498 | 5.1:+22367743 | MS.gene046409:CDS |
| CTTAAGGGAACTAGTAGTTT+TGG | 0.380222 | 5.1:+22367599 | MS.gene046409:CDS |
| GTACAGAAGATGTTTCTTAA+GGG | 0.381330 | 5.1:+22367584 | MS.gene046409:CDS |
| GTCTCGTCAATCCAAGCAAT+AGG | 0.384507 | 5.1:-22367215 | None:intergenic |
| CGTTTGATGGTCTATCAAAA+TGG | 0.393202 | 5.1:+22367038 | MS.gene046409:CDS |
| CGAAAATGGGGTTCGACACT+TGG | 0.398654 | 5.1:+22368350 | MS.gene046409:CDS |
| GTTTGCAGCGCCCTATTGCT+TGG | 0.403920 | 5.1:+22367204 | MS.gene046409:CDS |
| GACTCATATTGGACGGTCAT+TGG | 0.404817 | 5.1:+22366974 | MS.gene046409:CDS |
| GGAGTCGATGCTTCCAAGTT+GGG | 0.405561 | 5.1:+22367380 | MS.gene046409:CDS |
| AGTAGCAATAACATGGGAAA+TGG | 0.417478 | 5.1:+22367482 | MS.gene046409:CDS |
| TCCTCAGGATGTTGTTGACT+TGG | 0.418057 | 5.1:+22367076 | MS.gene046409:CDS |
| TCCTGATTGCAGGGATCATA+AGG | 0.421377 | 5.1:-22367284 | None:intergenic |
| TTTGATCACACGAGATGGTT+GGG | 0.422810 | 5.1:-22370323 | None:intergenic |
| AGGATGTTGTTGACTTGGTT+AGG | 0.424085 | 5.1:+22367081 | MS.gene046409:CDS |
| TCTAAATGCACACATGGCTT+TGG | 0.435149 | 5.1:+22367818 | MS.gene046409:CDS |
| TAGTCTTACTTCCTAAAAGA+AGG | 0.436907 | 5.1:-22368919 | None:intergenic |
| GCCTTATGATCCCTGCAATC+AGG | 0.440028 | 5.1:+22367283 | MS.gene046409:CDS |
| ACGAAATCAGAGACTCATAT+TGG | 0.440224 | 5.1:+22366963 | MS.gene046409:CDS |
| GCGACCAGTGTTACCTCGTT+GGG | 0.451664 | 5.1:+22366872 | MS.gene046409:CDS |
| ACTATCATAGTCACCACTAC+TGG | 0.457911 | 5.1:-22368436 | None:intergenic |
| TCAGGATAGTGGAGAAAGTC+AGG | 0.458623 | 5.1:+22367301 | MS.gene046409:CDS |
| TGCAGTTGTATATGGAAGGT+TGG | 0.460207 | 5.1:+22367550 | MS.gene046409:CDS |
| AGTAGTGGTGACTATGATAG+TGG | 0.460572 | 5.1:+22368438 | MS.gene046409:CDS |
| CTCTTGAGAGCTACAATAGT+TGG | 0.472193 | 5.1:+22370173 | MS.gene046409:CDS |
| AGCACAGGAAAAGGCATTGA+AGG | 0.473023 | 5.1:-22369867 | None:intergenic |
| CAACGGAAAGGCATCGGATA+GGG | 0.473840 | 5.1:+22366788 | MS.gene046409:CDS |
| CAGAATCAGCATAAATTTCA+GGG | 0.479346 | 5.1:-22367253 | None:intergenic |
| AGTATGCTTAACTATAACAT+TGG | 0.483021 | 5.1:-22367420 | None:intergenic |
| TCTCGTCAATCCAAGCAATA+GGG | 0.485939 | 5.1:-22367214 | None:intergenic |
| ATGCTAATGTTCGATATGCT+TGG | 0.490597 | 5.1:+22367726 | MS.gene046409:CDS |
| AAGGTCTCTTCTGCTGCTGA+AGG | 0.492093 | 5.1:+22368549 | MS.gene046409:CDS |
| ATTGCTTGGATTGACGAGAC+AGG | 0.495738 | 5.1:+22367218 | MS.gene046409:CDS |
| TAGAAATTAAACCTGGCAAA+AGG | 0.497397 | 5.1:-22367866 | None:intergenic |
| GATAGACCATCAAACGTTCT+GGG | 0.497415 | 5.1:-22367031 | None:intergenic |
| TGGACGCCCAGAACGTTTGA+TGG | 0.500372 | 5.1:+22367025 | MS.gene046409:CDS |
| ATACCTCAGGGAATAGCATC+TGG | 0.501440 | 5.1:+22369822 | MS.gene046409:intron |
| GCATCAATAAGCACAGGAAA+AGG | 0.503405 | 5.1:-22369876 | None:intergenic |
| TGGAGTCGATGCTTCCAAGT+TGG | 0.503473 | 5.1:+22367379 | MS.gene046409:CDS |
| ACTATGATGAAGTGTGGGCT+TGG | 0.505685 | 5.1:+22367776 | MS.gene046409:CDS |
| TACAGTGATGCAATCACGAT+TGG | 0.505775 | 5.1:+22367658 | MS.gene046409:CDS |
| GATCCCTGCAATCAGGATAG+TGG | 0.509927 | 5.1:+22367290 | MS.gene046409:CDS |
| AATATGGAGCTTCTCCGTCC+TGG | 0.513713 | 5.1:+22368396 | MS.gene046409:CDS |
| AAAGGCATTGAAGGGGATGT+TGG | 0.517939 | 5.1:-22369858 | None:intergenic |
| TGCGACCAGTGTTACCTCGT+TGG | 0.519288 | 5.1:+22366871 | MS.gene046409:CDS |
| GGCAAACAACGGAAAGGCAT+CGG | 0.532519 | 5.1:+22366782 | MS.gene046409:CDS |
| CTATCATAGTCACCACTACT+GGG | 0.534346 | 5.1:-22368435 | None:intergenic |
| CTATCAAAATGGTGAATGGA+AGG | 0.536490 | 5.1:+22367049 | MS.gene046409:CDS |
| CTATATAGTATCTTGGATTG+TGG | 0.536691 | 5.1:-22368473 | None:intergenic |
| TGCATCACTGTACTTGAGAA+GGG | 0.539798 | 5.1:-22367647 | None:intergenic |
| TATATGAATTATAAGAAGAG+TGG | 0.542935 | 5.1:+22367005 | MS.gene046409:CDS |
| ATATGAGTCTCTGATTTCGT+CGG | 0.544734 | 5.1:-22366960 | None:intergenic |
| CAACATATTCTGGACAGATG+TGG | 0.545442 | 5.1:-22368518 | None:intergenic |
| ACTGGTCGCAGATCTCCGTT+TGG | 0.546119 | 5.1:-22366858 | None:intergenic |
| ACAACGGAAAGGCATCGGAT+AGG | 0.546402 | 5.1:+22366787 | MS.gene046409:CDS |
| TGGTCTATCAAAATGGTGAA+TGG | 0.549899 | 5.1:+22367045 | MS.gene046409:CDS |
| AACATATTCTGGACAGATGT+GGG | 0.551162 | 5.1:-22368517 | None:intergenic |
| GGACGAAACTGTCTAGTGCC+AGG | 0.552779 | 5.1:-22368414 | None:intergenic |
| CCACATGCTACATGTCCAAA+CGG | 0.553167 | 5.1:+22366843 | MS.gene046409:CDS |
| AACATGGGAAATGGAAATGT+TGG | 0.556039 | 5.1:+22367491 | MS.gene046409:CDS |
| TATCTACTATGATGAAGTGT+GGG | 0.563052 | 5.1:+22367771 | MS.gene046409:CDS |
| GCACAGGAAAAGGCATTGAA+GGG | 0.565819 | 5.1:-22369866 | None:intergenic |
| ATTAAACCTGGCAAAAGGAA+AGG | 0.568389 | 5.1:-22367861 | None:intergenic |
| AATAGTTGGCCTTCAAAGCA+AGG | 0.570840 | 5.1:+22370187 | MS.gene046409:CDS |
| CTGAGAGCATCAATAAGCAC+AGG | 0.571313 | 5.1:-22369882 | None:intergenic |
| TATTGATGCTCTCAGAAACA+AGG | 0.572331 | 5.1:+22369890 | MS.gene046409:CDS |
| TGAAGATAGTAGCAATAACA+TGG | 0.572879 | 5.1:+22367475 | MS.gene046409:CDS |
| CAGAAACAAGGTTTCTGCGA+AGG | 0.572993 | 5.1:+22369902 | MS.gene046409:CDS |
| TGAATGGAAGGACTTTCCTC+AGG | 0.574245 | 5.1:+22367061 | MS.gene046409:CDS |
| GTAGTGCAGTTGTATATGGA+AGG | 0.578361 | 5.1:+22367546 | MS.gene046409:CDS |
| TTGCTTGGATTGACGAGACA+GGG | 0.581940 | 5.1:+22367219 | MS.gene046409:CDS |
| GAGTCGATGCTTCCAAGTTG+GGG | 0.583392 | 5.1:+22367381 | MS.gene046409:CDS |
| TTGCATCACTGTACTTGAGA+AGG | 0.584101 | 5.1:-22367648 | None:intergenic |
| AAGTGTGGGCTTGGTCATTG+TGG | 0.585698 | 5.1:+22367785 | MS.gene046409:CDS |
| CCATATTCCCCATTATTACA+CGG | 0.586757 | 5.1:-22368380 | None:intergenic |
| TCTCCACTATCCTGATTGCA+GGG | 0.589306 | 5.1:-22367293 | None:intergenic |
| ATCACACGAGATGGTTGGGA+GGG | 0.590498 | 5.1:-22370319 | None:intergenic |
| TATGCATTATCTGCAATTCA+GGG | 0.603277 | 5.1:+22369941 | MS.gene046409:CDS |
| AGACAGTTTCGTCCCAGTAG+TGG | 0.612844 | 5.1:+22368423 | MS.gene046409:CDS |
| ATAGCATCTGGTTCGCGTAG+AGG | 0.613583 | 5.1:+22369834 | MS.gene046409:CDS |
| GTAGTGGTGACTATGATAGT+GGG | 0.614725 | 5.1:+22368439 | MS.gene046409:CDS |
| TCTACATCTAAATGCACACA+TGG | 0.616416 | 5.1:+22367812 | MS.gene046409:CDS |
| CCGTTTGGACATGTAGCATG+TGG | 0.622892 | 5.1:-22366843 | None:intergenic |
| GATGCCCAACGAGGTAACAC+TGG | 0.624845 | 5.1:-22366876 | None:intergenic |
| GGGTTGTGCTTAATCTGAAG+CGG | 0.628518 | 5.1:+22366808 | MS.gene046409:CDS |
| GATCACACGAGATGGTTGGG+AGG | 0.630443 | 5.1:-22370320 | None:intergenic |
| GAAACTGTCTAGTGCCAGGA+CGG | 0.638018 | 5.1:-22368410 | None:intergenic |
| TTGTGATATTGACGAAAATG+GGG | 0.640860 | 5.1:+22368338 | MS.gene046409:CDS |
| GCATCACTGTACTTGAGAAG+GGG | 0.643866 | 5.1:-22367646 | None:intergenic |
| CTATCTACTATGATGAAGTG+TGG | 0.646279 | 5.1:+22367770 | MS.gene046409:CDS |
| AATCAGAGACTCATATTGGA+CGG | 0.648143 | 5.1:+22366967 | MS.gene046409:CDS |
| GAAGATAGTAGCAATAACAT+GGG | 0.651958 | 5.1:+22367476 | MS.gene046409:CDS |
| CATGGAGGCAAACAACGGAA+AGG | 0.657589 | 5.1:+22366776 | None:intergenic |
| CACAGGAAAAGGCATTGAAG+GGG | 0.658134 | 5.1:-22369865 | None:intergenic |
| ACTGTGGAGGTAGAGTTACA+TGG | 0.660219 | 5.1:+22367128 | MS.gene046409:CDS |
| ACCAAGTCAACAACATCCTG+AGG | 0.662401 | 5.1:-22367077 | None:intergenic |
| TGCGAAGAAAGCAACTGTGG+AGG | 0.668909 | 5.1:+22367115 | MS.gene046409:CDS |
| AGTCGATGCTTCCAAGTTGG+GGG | 0.670164 | 5.1:+22367382 | MS.gene046409:CDS |
| TAATGCGAAGAAAGCAACTG+TGG | 0.675973 | 5.1:+22367112 | MS.gene046409:CDS |
| ATAAACATGGAGGCAAACAA+CGG | 0.683583 | 5.1:+22366771 | None:intergenic |
| TGGTGACTATGATAGTGGGG+TGG | 0.700703 | 5.1:+22368443 | MS.gene046409:CDS |
| TAGTGGTGACTATGATAGTG+GGG | 0.714306 | 5.1:+22368440 | MS.gene046409:CDS |
| GATACAAGTGATGCCCAACG+AGG | 0.767068 | 5.1:-22366885 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGTAATTTAATATCATT+AGG | - | chr5.1:22367344-22367363 | None:intergenic | 10.0% |
| !! | AACTTAATATATATGAAAAA+AGG | - | chr5.1:22369113-22369132 | None:intergenic | 10.0% |
| !! | ATTGATGTATAAATAAATAT+GGG | - | chr5.1:22368199-22368218 | None:intergenic | 10.0% |
| !! | AGGAAAAAAATTATTTAGAT+GGG | + | chr5.1:22369363-22369382 | MS.gene046409:intron | 15.0% |
| !! | CATTGATGTATAAATAAATA+TGG | - | chr5.1:22368200-22368219 | None:intergenic | 15.0% |
| !! | CATTTAGAAATTGAAATAAA+TGG | + | chr5.1:22367359-22367378 | MS.gene046409:CDS | 15.0% |
| !! | TTGATGTATAAATAAATATG+GGG | - | chr5.1:22368198-22368217 | None:intergenic | 15.0% |
| !! | TTTACACAAGTATTTATTTA+AGG | + | chr5.1:22367980-22367999 | MS.gene046409:intron | 15.0% |
| !!! | AAGACTAAGAATAATATTTT+TGG | + | chr5.1:22368935-22368954 | MS.gene046409:CDS | 15.0% |
| !!! | AGACTAAGAATAATATTTTT+GGG | + | chr5.1:22368936-22368955 | MS.gene046409:CDS | 15.0% |
| !!! | ATTTTAATAAAATTCTGAGA+AGG | + | chr5.1:22369547-22369566 | MS.gene046409:intron | 15.0% |
| !!! | GGAATTGATAATTTAATAAA+AGG | + | chr5.1:22369239-22369258 | MS.gene046409:intron | 15.0% |
| !!! | TATATTTTTATTTTGCTCAA+CGG | - | chr5.1:22367522-22367541 | None:intergenic | 15.0% |
| !!! | TTTTTATTATTCTGTTGTAA+TGG | + | chr5.1:22368273-22368292 | MS.gene046409:intron | 15.0% |
| !! | ACCAATATTATAAACGAAAA+TGG | - | chr5.1:22368648-22368667 | None:intergenic | 20.0% |
| !! | AGAAGACATAAAAGAAATAA+AGG | - | chr5.1:22368587-22368606 | None:intergenic | 20.0% |
| !! | ATAAATAAATATGGGGAAAA+AGG | - | chr5.1:22368191-22368210 | None:intergenic | 20.0% |
| !! | ATATAAAAGATGAAACACAT+TGG | - | chr5.1:22369179-22369198 | None:intergenic | 20.0% |
| !! | ATTTAATATCATTAGGATCT+TGG | - | chr5.1:22367337-22367356 | None:intergenic | 20.0% |
| !! | GAGCAAAATAAAAATATAGT+TGG | + | chr5.1:22367524-22367543 | MS.gene046409:CDS | 20.0% |
| !! | GAGGAAAAAAATTATTTAGA+TGG | + | chr5.1:22369362-22369381 | MS.gene046409:intron | 20.0% |
| !! | TATATATGAAAAAAGGAAAG+TGG | - | chr5.1:22369106-22369125 | None:intergenic | 20.0% |
| !! | TATATGAATTATAAGAAGAG+TGG | + | chr5.1:22367005-22367024 | MS.gene046409:CDS | 20.0% |
| !! | TATTATAAACGAAAATGGAA+AGG | - | chr5.1:22368643-22368662 | None:intergenic | 20.0% |
| !!! | AAAGGATCTTATTTTTTGTT+AGG | - | chr5.1:22368625-22368644 | None:intergenic | 20.0% |
| !!! | AATTCAATAGTTTTTTCCTT+TGG | + | chr5.1:22367955-22367974 | MS.gene046409:intron | 20.0% |
| !!! | AGTATTATAGAACATTTTCA+AGG | - | chr5.1:22368089-22368108 | None:intergenic | 20.0% |
| !!! | GACTAAGAATAATATTTTTG+GGG | + | chr5.1:22368937-22368956 | MS.gene046409:CDS | 20.0% |
| !!! | GATATATAATGCATTTTTAC+AGG | + | chr5.1:22368896-22368915 | MS.gene046409:intron | 20.0% |
| !!! | TAACTTGTTGATATATGATT+CGG | + | chr5.1:22368690-22368709 | MS.gene046409:intron | 20.0% |
| !!! | TATAAATTGTCATTGTTTTC+TGG | + | chr5.1:22370023-22370042 | MS.gene046409:intron | 20.0% |
| !!! | TCCATTTTCGTTTATAATAT+TGG | + | chr5.1:22368644-22368663 | MS.gene046409:intron | 20.0% |
| ! | AAAAATTATTTAGATGGGAC+AGG | + | chr5.1:22369368-22369387 | MS.gene046409:intron | 25.0% |
| ! | AAATTACGAAAAATTGTCGT+GGG | + | chr5.1:22367702-22367721 | MS.gene046409:CDS | 25.0% |
| ! | AAGAAACCGTTTAAACAATT+AGG | - | chr5.1:22370292-22370311 | None:intergenic | 25.0% |
| ! | AATACTTGTGTAAAAACCAA+AGG | - | chr5.1:22367974-22367993 | None:intergenic | 25.0% |
| ! | ACAATTGACAATAATAGAAG+TGG | - | chr5.1:22368053-22368072 | None:intergenic | 25.0% |
| ! | AGTATGCTTAACTATAACAT+TGG | - | chr5.1:22367423-22367442 | None:intergenic | 25.0% |
| ! | ATACCTCCTAATTGTTTAAA+CGG | + | chr5.1:22370283-22370302 | MS.gene046409:intron | 25.0% |
| ! | ATCCAAGATACTATATAGTA+TGG | + | chr5.1:22368478-22368497 | MS.gene046409:CDS | 25.0% |
| ! | ATTGTGATATTGACGAAAAT+GGG | + | chr5.1:22368337-22368356 | MS.gene046409:CDS | 25.0% |
| ! | CACAAGTATTTATTTAAGGA+TGG | + | chr5.1:22367984-22368003 | MS.gene046409:intron | 25.0% |
| ! | TGATGATTAGAAATTAAACC+TGG | - | chr5.1:22367876-22367895 | None:intergenic | 25.0% |
| ! | TTATCAATTCCTCTATATTC+TGG | - | chr5.1:22369230-22369249 | None:intergenic | 25.0% |
| ! | TTCCATACTATATAGTATCT+TGG | - | chr5.1:22368483-22368502 | None:intergenic | 25.0% |
| ! | TTGAAACTAACAACATATTC+TGG | - | chr5.1:22368531-22368550 | None:intergenic | 25.0% |
| !! | AGAATATGTTGTTAGTTTCA+AGG | + | chr5.1:22368530-22368549 | MS.gene046409:CDS | 25.0% |
| !! | CGAATCAATTTTTGAATTCT+GGG | + | chr5.1:22369799-22369818 | MS.gene046409:intron | 25.0% |
| !! | TATCAGATGAATTTGAAATC+TGG | + | chr5.1:22367182-22367201 | MS.gene046409:CDS | 25.0% |
| !! | TCGAATCAATTTTTGAATTC+TGG | + | chr5.1:22369798-22369817 | MS.gene046409:intron | 25.0% |
| !! | TTTAAACAATTAGGAGGTAT+AGG | - | chr5.1:22370283-22370302 | None:intergenic | 25.0% |
| !! | TTTTACTATCTAAGCAATCT+AGG | + | chr5.1:22369621-22369640 | MS.gene046409:intron | 25.0% |
| !!! | AAATGCATTGCTTTTTACAA+AGG | - | chr5.1:22369069-22369088 | None:intergenic | 25.0% |
| !!! | TGCTTTTTACAAAGGAAATT+TGG | - | chr5.1:22369061-22369080 | None:intergenic | 25.0% |
| AAAAATTCAGCACAAGATGA+TGG | - | chr5.1:22367154-22367173 | None:intergenic | 30.0% | |
| AAACAAGTTTCCAAAAGGAA+GGG | - | chr5.1:22368862-22368881 | None:intergenic | 30.0% | |
| AAACCGTTTAAACAATTAGG+AGG | - | chr5.1:22370289-22370308 | None:intergenic | 30.0% | |
| AAGTGATCTGTCAAATATGA+AGG | - | chr5.1:22368786-22368805 | None:intergenic | 30.0% | |
| AATTACGAAAAATTGTCGTG+GGG | + | chr5.1:22367703-22367722 | MS.gene046409:CDS | 30.0% | |
| ATATGCATTATCTGCAATTC+AGG | + | chr5.1:22369940-22369959 | MS.gene046409:CDS | 30.0% | |
| CAGAATCAGCATAAATTTCA+GGG | - | chr5.1:22367256-22367275 | None:intergenic | 30.0% | |
| CATTGTGATATTGACGAAAA+TGG | + | chr5.1:22368336-22368355 | MS.gene046409:CDS | 30.0% | |
| CTATATAGTATCTTGGATTG+TGG | - | chr5.1:22368476-22368495 | None:intergenic | 30.0% | |
| GAAAGAAACAAGTTTCCAAA+AGG | - | chr5.1:22368867-22368886 | None:intergenic | 30.0% | |
| GAAATTACGAAAAATTGTCG+TGG | + | chr5.1:22367701-22367720 | MS.gene046409:CDS | 30.0% | |
| GAAGATAGTAGCAATAACAT+GGG | + | chr5.1:22367476-22367495 | MS.gene046409:CDS | 30.0% | |
| GATATCAATTAAGACAGAGA+CGG | - | chr5.1:22369998-22370017 | None:intergenic | 30.0% | |
| GGATAAATTCCAGAATATAG+AGG | + | chr5.1:22369218-22369237 | MS.gene046409:intron | 30.0% | |
| GTACAGAAGATGTTTCTTAA+GGG | + | chr5.1:22367584-22367603 | MS.gene046409:CDS | 30.0% | |
| TAGAAATTAAACCTGGCAAA+AGG | - | chr5.1:22367869-22367888 | None:intergenic | 30.0% | |
| TAGATATGCAGGCATAATTA+GGG | + | chr5.1:22369334-22369353 | MS.gene046409:intron | 30.0% | |
| TATAGATTTCTGACTCATCA+TGG | + | chr5.1:22369576-22369595 | MS.gene046409:intron | 30.0% | |
| TATCTACTATGATGAAGTGT+GGG | + | chr5.1:22367771-22367790 | MS.gene046409:CDS | 30.0% | |
| TATGCATTATCTGCAATTCA+GGG | + | chr5.1:22369941-22369960 | MS.gene046409:CDS | 30.0% | |
| TCAGAATCAGCATAAATTTC+AGG | - | chr5.1:22367257-22367276 | None:intergenic | 30.0% | |
| TCTACTAATATATCTCTGCA+TGG | + | chr5.1:22368010-22368029 | MS.gene046409:intron | 30.0% | |
| TGAAGATAGTAGCAATAACA+TGG | + | chr5.1:22367475-22367494 | MS.gene046409:CDS | 30.0% | |
| TGTACAGAAGATGTTTCTTA+AGG | + | chr5.1:22367583-22367602 | MS.gene046409:CDS | 30.0% | |
| TTACAAAGGAAATTTGGCAT+CGG | - | chr5.1:22369055-22369074 | None:intergenic | 30.0% | |
| TTGTGATATTGACGAAAATG+GGG | + | chr5.1:22368338-22368357 | MS.gene046409:CDS | 30.0% | |
| ! | ATTTTTACAGGCCTTCTTTT+AGG | + | chr5.1:22368908-22368927 | MS.gene046409:intron | 30.0% |
| ! | CATTGGCTATCTTAATATCA+AGG | - | chr5.1:22369162-22369181 | None:intergenic | 30.0% |
| ! | TAGTCTTACTTCCTAAAAGA+AGG | - | chr5.1:22368922-22368941 | None:intergenic | 30.0% |
| ! | TCTGTTGTAATGGAAAGAAA+GGG | + | chr5.1:22368283-22368302 | MS.gene046409:intron | 30.0% |
| ! | TTCTGTTGTAATGGAAAGAA+AGG | + | chr5.1:22368282-22368301 | MS.gene046409:intron | 30.0% |
| !! | ATTGTTTTCTGGTAATTACC+AGG | + | chr5.1:22370034-22370053 | MS.gene046409:intron | 30.0% |
| !!! | AAGGCTTTAACTTTTTTGCA+TGG | + | chr5.1:22370221-22370240 | MS.gene046409:intron | 30.0% |
| !!! | AGGCTTTAACTTTTTTGCAT+GGG | + | chr5.1:22370222-22370241 | MS.gene046409:intron | 30.0% |
| AACATATTCTGGACAGATGT+GGG | - | chr5.1:22368520-22368539 | None:intergenic | 35.0% | |
| AACATGGGAAATGGAAATGT+TGG | + | chr5.1:22367491-22367510 | MS.gene046409:CDS | 35.0% | |
| AAGGAGAAATCAACAAGCTA+GGG | - | chr5.1:22368744-22368763 | None:intergenic | 35.0% | |
| AATCAGAGACTCATATTGGA+CGG | + | chr5.1:22366967-22366986 | MS.gene046409:CDS | 35.0% | |
| ACGAAATCAGAGACTCATAT+TGG | + | chr5.1:22366963-22366982 | MS.gene046409:CDS | 35.0% | |
| AGTAGCAATAACATGGGAAA+TGG | + | chr5.1:22367482-22367501 | MS.gene046409:CDS | 35.0% | |
| ATAAGTAGCATGTCTTCAGA+AGG | + | chr5.1:22369197-22369216 | MS.gene046409:intron | 35.0% | |
| ATATGAGTCTCTGATTTCGT+CGG | - | chr5.1:22366963-22366982 | None:intergenic | 35.0% | |
| ATGCTAATGTTCGATATGCT+TGG | + | chr5.1:22367726-22367745 | MS.gene046409:CDS | 35.0% | |
| ATTAAACCTGGCAAAAGGAA+AGG | - | chr5.1:22367864-22367883 | None:intergenic | 35.0% | |
| CCATATTCCCCATTATTACA+CGG | - | chr5.1:22368383-22368402 | None:intergenic | 35.0% | |
| CTAGATATGCAGGCATAATT+AGG | + | chr5.1:22369333-22369352 | MS.gene046409:intron | 35.0% | |
| CTATCAAAATGGTGAATGGA+AGG | + | chr5.1:22367049-22367068 | MS.gene046409:CDS | 35.0% | |
| CTATCTACTATGATGAAGTG+TGG | + | chr5.1:22367770-22367789 | MS.gene046409:CDS | 35.0% | |
| GAAACAAGTTTCCAAAAGGA+AGG | - | chr5.1:22368863-22368882 | None:intergenic | 35.0% | |
| GTACTTGATGAGTTAATCAG+AGG | + | chr5.1:22368666-22368685 | MS.gene046409:intron | 35.0% | |
| TAAGCAATCTAGGTTTCAGT+CGG | + | chr5.1:22369631-22369650 | MS.gene046409:intron | 35.0% | |
| TATTGATGCTCTCAGAAACA+AGG | + | chr5.1:22369890-22369909 | MS.gene046409:CDS | 35.0% | |
| TCTACATCTAAATGCACACA+TGG | + | chr5.1:22367812-22367831 | MS.gene046409:CDS | 35.0% | |
| TGAATGGTTTATCTGCTACA+TGG | + | chr5.1:22370252-22370271 | MS.gene046409:intron | 35.0% | |
| TGGTCTATCAAAATGGTGAA+TGG | + | chr5.1:22367045-22367064 | MS.gene046409:CDS | 35.0% | |
| TGTATATGGAAGGTTGGATT+TGG | + | chr5.1:22367556-22367575 | MS.gene046409:CDS | 35.0% | |
| TGTTTGACAACTTCGTTTCT+TGG | - | chr5.1:22366912-22366931 | None:intergenic | 35.0% | |
| ! | ATGATTTTGCGAAGAAGTTG+AGG | + | chr5.1:22370129-22370148 | MS.gene046409:CDS | 35.0% |
| ! | CAAGTGACTGCATTGATAAA+AGG | + | chr5.1:22369407-22369426 | MS.gene046409:intron | 35.0% |
| ! | CGTTTGATGGTCTATCAAAA+TGG | + | chr5.1:22367038-22367057 | MS.gene046409:CDS | 35.0% |
| ! | CTTAAGGGAACTAGTAGTTT+TGG | + | chr5.1:22367599-22367618 | MS.gene046409:CDS | 35.0% |
| ! | CTTTTATCAATGCAGTCACT+TGG | - | chr5.1:22369409-22369428 | None:intergenic | 35.0% |
| ! | GAAAGAAAGGGATTCAAGTT+TGG | + | chr5.1:22368295-22368314 | MS.gene046409:intron | 35.0% |
| ! | GACTGCATTGATAAAAGGAA+TGG | + | chr5.1:22369412-22369431 | MS.gene046409:intron | 35.0% |
| ! | GTCTTTTGCCGTGTAATAAT+GGG | + | chr5.1:22368372-22368391 | MS.gene046409:CDS | 35.0% |
| ! | TCTGAACGTGACAAGATTTT+AGG | - | chr5.1:22368983-22369002 | None:intergenic | 35.0% |
| ! | TCTTTTGCCGTGTAATAATG+GGG | + | chr5.1:22368373-22368392 | MS.gene046409:CDS | 35.0% |
| ! | TGCATTGATAAAAGGAATGG+TGG | + | chr5.1:22369415-22369434 | MS.gene046409:intron | 35.0% |
| !! | AAGCAAGGTACTTTTCTCAA+AGG | + | chr5.1:22370202-22370221 | MS.gene046409:intron | 35.0% |
| !! | AGAAAAGTACCTTGCTTTGA+AGG | - | chr5.1:22370199-22370218 | None:intergenic | 35.0% |
| !! | ATGATTCGGTTCATTCCATT+TGG | + | chr5.1:22368704-22368723 | MS.gene046409:intron | 35.0% |
| !! | CAGATAAGTTCTAGATATGC+AGG | + | chr5.1:22369323-22369342 | MS.gene046409:intron | 35.0% |
| !!! | GTGACAAGATTTTAGGACTT+CGG | - | chr5.1:22368976-22368995 | None:intergenic | 35.0% |
| ACCATCTCGTGTGATCAAAA+TGG | + | chr5.1:22370327-22370346 | MS.gene046409:CDS | 40.0% | |
| ACTATCATAGTCACCACTAC+TGG | - | chr5.1:22368439-22368458 | None:intergenic | 40.0% | |
| AGTAGTGGTGACTATGATAG+TGG | + | chr5.1:22368438-22368457 | MS.gene046409:CDS | 40.0% | |
| CAACATATTCTGGACAGATG+TGG | - | chr5.1:22368521-22368540 | None:intergenic | 40.0% | |
| CTATCATAGTCACCACTACT+GGG | - | chr5.1:22368438-22368457 | None:intergenic | 40.0% | |
| CTCTTGAGAGCTACAATAGT+TGG | + | chr5.1:22370173-22370192 | MS.gene046409:CDS | 40.0% | |
| CTGGTAATTACCAGGCAAAA+AGG | + | chr5.1:22370042-22370061 | MS.gene046409:intron | 40.0% | |
| GAAGGAGAAATCAACAAGCT+AGG | - | chr5.1:22368745-22368764 | None:intergenic | 40.0% | |
| GATAGACCATCAAACGTTCT+GGG | - | chr5.1:22367034-22367053 | None:intergenic | 40.0% | |
| GCATCAATAAGCACAGGAAA+AGG | - | chr5.1:22369879-22369898 | None:intergenic | 40.0% | |
| GTAGCAGATAAACCATTCAC+TGG | - | chr5.1:22370251-22370270 | None:intergenic | 40.0% | |
| GTAGTGCAGTTGTATATGGA+AGG | + | chr5.1:22367546-22367565 | MS.gene046409:CDS | 40.0% | |
| GTAGTGGTGACTATGATAGT+GGG | + | chr5.1:22368439-22368458 | MS.gene046409:CDS | 40.0% | |
| GTTCATTCCATTTGGATGGA+GGG | + | chr5.1:22368712-22368731 | MS.gene046409:intron | 40.0% | |
| TAATGCGAAGAAAGCAACTG+TGG | + | chr5.1:22367112-22367131 | MS.gene046409:CDS | 40.0% | |
| TACAGTGATGCAATCACGAT+TGG | + | chr5.1:22367658-22367677 | MS.gene046409:CDS | 40.0% | |
| TCTAAATGCACACATGGCTT+TGG | + | chr5.1:22367818-22367837 | MS.gene046409:CDS | 40.0% | |
| TCTCGTCAATCCAAGCAATA+GGG | - | chr5.1:22367217-22367236 | None:intergenic | 40.0% | |
| TGATAGACCATCAAACGTTC+TGG | - | chr5.1:22367035-22367054 | None:intergenic | 40.0% | |
| TGCAGTTGTATATGGAAGGT+TGG | + | chr5.1:22367550-22367569 | MS.gene046409:CDS | 40.0% | |
| TGCATCACTGTACTTGAGAA+GGG | - | chr5.1:22367650-22367669 | None:intergenic | 40.0% | |
| TTCGGTTCATTCCATTTGGA+TGG | + | chr5.1:22368708-22368727 | MS.gene046409:intron | 40.0% | |
| TTGACAGATCACTTCATGTC+TGG | + | chr5.1:22368792-22368811 | MS.gene046409:intron | 40.0% | |
| TTGCATCACTGTACTTGAGA+AGG | - | chr5.1:22367651-22367670 | None:intergenic | 40.0% | |
| TTTGATCACACGAGATGGTT+GGG | - | chr5.1:22370326-22370345 | None:intergenic | 40.0% | |
| ! | CCGTGTAATAATGGGGAATA+TGG | + | chr5.1:22368380-22368399 | MS.gene046409:CDS | 40.0% |
| ! | GGTCTTTTGCCGTGTAATAA+TGG | + | chr5.1:22368371-22368390 | MS.gene046409:CDS | 40.0% |
| ! | GTTGATTTCTCCTTCTGGTT+GGG | + | chr5.1:22368750-22368769 | MS.gene046409:intron | 40.0% |
| ! | TAGTGGTGACTATGATAGTG+GGG | + | chr5.1:22368440-22368459 | MS.gene046409:CDS | 40.0% |
| ! | TGCAGGCATAATTAGGGTTT+TGG | + | chr5.1:22369340-22369359 | MS.gene046409:intron | 40.0% |
| ! | TTTTGATCACACGAGATGGT+TGG | - | chr5.1:22370327-22370346 | None:intergenic | 40.0% |
| !! | AATAGTTGGCCTTCAAAGCA+AGG | + | chr5.1:22370187-22370206 | MS.gene046409:CDS | 40.0% |
| !! | AGCTTGTTGATTTCTCCTTC+TGG | + | chr5.1:22368745-22368764 | MS.gene046409:intron | 40.0% |
| !! | AGGATGTTGTTGACTTGGTT+AGG | + | chr5.1:22367081-22367100 | MS.gene046409:CDS | 40.0% |
| !! | AGGCATAATTAGGGTTTTGG+AGG | + | chr5.1:22369343-22369362 | MS.gene046409:intron | 40.0% |
| !! | GTTGGTAGTGCAGTTGTATA+TGG | + | chr5.1:22367542-22367561 | MS.gene046409:CDS | 40.0% |
| !! | TAGTGTAAAACTAGCCTTGC+TGG | + | chr5.1:22369968-22369987 | MS.gene046409:intron | 40.0% |
| !! | TCCATTTTGATCACACGAGA+TGG | - | chr5.1:22370331-22370350 | None:intergenic | 40.0% |
| !! | TGTTGATTTCTCCTTCTGGT+TGG | + | chr5.1:22368749-22368768 | MS.gene046409:intron | 40.0% |
| !! | TTGAATTCTGGGATACCTCA+GGG | + | chr5.1:22369810-22369829 | MS.gene046409:intron | 40.0% |
| !! | TTTGAATTCTGGGATACCTC+AGG | + | chr5.1:22369809-22369828 | MS.gene046409:intron | 40.0% |
| !!! | CTGACTCATCATGGTTTTGA+AGG | + | chr5.1:22369585-22369604 | MS.gene046409:intron | 40.0% |
| ACCAAGTCAACAACATCCTG+AGG | - | chr5.1:22367080-22367099 | None:intergenic | 45.0% | |
| ACTATGATGAAGTGTGGGCT+TGG | + | chr5.1:22367776-22367795 | MS.gene046409:CDS | 45.0% | |
| ACTGTGGAGGTAGAGTTACA+TGG | + | chr5.1:22367128-22367147 | MS.gene046409:CDS | 45.0% | |
| ATACCTCAGGGAATAGCATC+TGG | + | chr5.1:22369822-22369841 | MS.gene046409:intron | 45.0% | |
| ATTGCTTGGATTGACGAGAC+AGG | + | chr5.1:22367218-22367237 | MS.gene046409:CDS | 45.0% | |
| CAAGGTTTCTGCGAAGGATA+TGG | + | chr5.1:22369908-22369927 | MS.gene046409:CDS | 45.0% | |
| CAGAAACAAGGTTTCTGCGA+AGG | + | chr5.1:22369902-22369921 | MS.gene046409:CDS | 45.0% | |
| CCACATGCTACATGTCCAAA+CGG | + | chr5.1:22366843-22366862 | MS.gene046409:CDS | 45.0% | |
| GACTCATATTGGACGGTCAT+TGG | + | chr5.1:22366974-22366993 | MS.gene046409:CDS | 45.0% | |
| GATGAAACCCTCCATCCAAA+TGG | - | chr5.1:22368722-22368741 | None:intergenic | 45.0% | |
| GCATCACTGTACTTGAGAAG+GGG | - | chr5.1:22367649-22367668 | None:intergenic | 45.0% | |
| GGGTTGTGCTTAATCTGAAG+CGG | + | chr5.1:22366808-22366827 | MS.gene046409:CDS | 45.0% | |
| GGTTCATTCCATTTGGATGG+AGG | + | chr5.1:22368711-22368730 | MS.gene046409:intron | 45.0% | |
| GTCTCGTCAATCCAAGCAAT+AGG | - | chr5.1:22367218-22367237 | None:intergenic | 45.0% | |
| TCCTGATTGCAGGGATCATA+AGG | - | chr5.1:22367287-22367306 | None:intergenic | 45.0% | |
| TCTCCACTATCCTGATTGCA+GGG | - | chr5.1:22367296-22367315 | None:intergenic | 45.0% | |
| TGAATGGAAGGACTTTCCTC+AGG | + | chr5.1:22367061-22367080 | MS.gene046409:CDS | 45.0% | |
| TTCTCCACTATCCTGATTGC+AGG | - | chr5.1:22367297-22367316 | None:intergenic | 45.0% | |
| TTGCTTGGATTGACGAGACA+GGG | + | chr5.1:22367219-22367238 | MS.gene046409:CDS | 45.0% | |
| ! | CAAAGGAAATTTGGCATCGG+AGG | - | chr5.1:22369052-22369071 | None:intergenic | 45.0% |
| ! | TCCTCAGGATGTTGTTGACT+TGG | + | chr5.1:22367076-22367095 | MS.gene046409:CDS | 45.0% |
| !! | AAAGGCATTGAAGGGGATGT+TGG | - | chr5.1:22369861-22369880 | None:intergenic | 45.0% |
| !! | AGCACAGGAAAAGGCATTGA+AGG | - | chr5.1:22369870-22369889 | None:intergenic | 45.0% |
| !! | CACAGGAAAAGGCATTGAAG+GGG | - | chr5.1:22369868-22369887 | None:intergenic | 45.0% |
| !! | CTGAGAGCATCAATAAGCAC+AGG | - | chr5.1:22369885-22369904 | None:intergenic | 45.0% |
| !! | GCACAGGAAAAGGCATTGAA+GGG | - | chr5.1:22369869-22369888 | None:intergenic | 45.0% |
| !! | GCTTGGCTTGCTTCTTCTAA+AGG | + | chr5.1:22367743-22367762 | MS.gene046409:CDS | 45.0% |
| !! | TCAGGATAGTGGAGAAAGTC+AGG | + | chr5.1:22367301-22367320 | MS.gene046409:CDS | 45.0% |
| AAGGTCTCTTCTGCTGCTGA+AGG | + | chr5.1:22368549-22368568 | MS.gene046409:CDS | 50.0% | |
| AATATGGAGCTTCTCCGTCC+TGG | + | chr5.1:22368396-22368415 | MS.gene046409:CDS | 50.0% | |
| AGACAGTTTCGTCCCAGTAG+TGG | + | chr5.1:22368423-22368442 | MS.gene046409:CDS | 50.0% | |
| ATCACACGAGATGGTTGGGA+GGG | - | chr5.1:22370322-22370341 | None:intergenic | 50.0% | |
| CCGTTTGGACATGTAGCATG+TGG | - | chr5.1:22366846-22366865 | None:intergenic | 50.0% | |
| CGAAAATGGGGTTCGACACT+TGG | + | chr5.1:22368350-22368369 | MS.gene046409:CDS | 50.0% | |
| GAAACTGTCTAGTGCCAGGA+CGG | - | chr5.1:22368413-22368432 | None:intergenic | 50.0% | |
| GAACCAGATGCTATTCCCTG+AGG | - | chr5.1:22369828-22369847 | None:intergenic | 50.0% | |
| GAGTCGATGCTTCCAAGTTG+GGG | + | chr5.1:22367381-22367400 | MS.gene046409:CDS | 50.0% | |
| GATACAAGTGATGCCCAACG+AGG | - | chr5.1:22366888-22366907 | None:intergenic | 50.0% | |
| GATCCCTGCAATCAGGATAG+TGG | + | chr5.1:22367290-22367309 | MS.gene046409:CDS | 50.0% | |
| GCCTTATGATCCCTGCAATC+AGG | + | chr5.1:22367283-22367302 | MS.gene046409:CDS | 50.0% | |
| GGAGTCGATGCTTCCAAGTT+GGG | + | chr5.1:22367380-22367399 | MS.gene046409:CDS | 50.0% | |
| TGCGAAGAAAGCAACTGTGG+AGG | + | chr5.1:22367115-22367134 | MS.gene046409:CDS | 50.0% | |
| TGGAGTCGATGCTTCCAAGT+TGG | + | chr5.1:22367379-22367398 | MS.gene046409:CDS | 50.0% | |
| TTGCATGGGACTCCAGTGAA+TGG | + | chr5.1:22370236-22370255 | MS.gene046409:intron | 50.0% | |
| ! | AAGTGTGGGCTTGGTCATTG+TGG | + | chr5.1:22367785-22367804 | MS.gene046409:CDS | 50.0% |
| ! | AGCGAGTCATCCTTTTTGCC+TGG | - | chr5.1:22370055-22370074 | None:intergenic | 50.0% |
| ! | AGTCGATGCTTCCAAGTTGG+GGG | + | chr5.1:22367382-22367401 | MS.gene046409:CDS | 50.0% |
| ! | ATAGCATCTGGTTCGCGTAG+AGG | + | chr5.1:22369834-22369853 | MS.gene046409:CDS | 50.0% |
| ! | CACGAGTCATCCTTTTTGCC+TGG | - | chr5.1:22370109-22370128 | None:intergenic | 50.0% |
| ! | CTGCTACCTTTCCTTTTGCC+AGG | + | chr5.1:22367855-22367874 | MS.gene046409:CDS | 50.0% |
| ! | GGCAAACAACGGAAAGGCAT+CGG | + | chr5.1:22366782-22366801 | MS.gene046409:CDS | 50.0% |
| ! | TGTACGAGTGCCCTTCCTTT+TGG | + | chr5.1:22368849-22368868 | MS.gene046409:intron | 50.0% |
| !! | ACAACGGAAAGGCATCGGAT+AGG | + | chr5.1:22366787-22366806 | MS.gene046409:CDS | 50.0% |
| !! | CAACGGAAAGGCATCGGATA+GGG | + | chr5.1:22366788-22366807 | MS.gene046409:CDS | 50.0% |
| !! | TGGTGACTATGATAGTGGGG+TGG | + | chr5.1:22368443-22368462 | MS.gene046409:CDS | 50.0% |
| ACAGAGACGGACATCCAGCA+AGG | - | chr5.1:22369985-22370004 | None:intergenic | 55.0% | |
| ACTGGTCGCAGATCTCCGTT+TGG | - | chr5.1:22366861-22366880 | None:intergenic | 55.0% | |
| AGCTCAAGTGCCCAACCAGA+AGG | - | chr5.1:22368763-22368782 | None:intergenic | 55.0% | |
| GATCACACGAGATGGTTGGG+AGG | - | chr5.1:22370323-22370342 | None:intergenic | 55.0% | |
| GATGCCCAACGAGGTAACAC+TGG | - | chr5.1:22366879-22366898 | None:intergenic | 55.0% | |
| GCGACCAGTGTTACCTCGTT+GGG | + | chr5.1:22366872-22366891 | MS.gene046409:CDS | 55.0% | |
| GGACGAAACTGTCTAGTGCC+AGG | - | chr5.1:22368417-22368436 | None:intergenic | 55.0% | |
| GTTTGCAGCGCCCTATTGCT+TGG | + | chr5.1:22367204-22367223 | MS.gene046409:CDS | 55.0% | |
| TGCGACCAGTGTTACCTCGT+TGG | + | chr5.1:22366871-22366890 | MS.gene046409:CDS | 55.0% | |
| TGGACGCCCAGAACGTTTGA+TGG | + | chr5.1:22367025-22367044 | MS.gene046409:CDS | 55.0% | |
| GCACTCGTACAGCTTGGCAG+GGG | - | chr5.1:22368840-22368859 | None:intergenic | 60.0% | |
| GGCACTCGTACAGCTTGGCA+GGG | - | chr5.1:22368841-22368860 | None:intergenic | 60.0% | |
| ! | CAAGTTGGGGGAGTGCACAG+GGG | + | chr5.1:22367394-22367413 | MS.gene046409:CDS | 60.0% |
| ! | CCAAGTTGGGGGAGTGCACA+GGG | + | chr5.1:22367393-22367412 | MS.gene046409:CDS | 60.0% |
| ! | TCCAAGTTGGGGGAGTGCAC+AGG | + | chr5.1:22367392-22367411 | MS.gene046409:CDS | 60.0% |
| !! | GGAAGGGCACTCGTACAGCT+TGG | - | chr5.1:22368846-22368865 | None:intergenic | 60.0% |
| CCCTGTGCACTCCCCCAACT+TGG | - | chr5.1:22367396-22367415 | None:intergenic | 65.0% | |
| GGGCACTCGTACAGCTTGGC+AGG | - | chr5.1:22368842-22368861 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 22366777 | 22370360 | 22366777 | ID=MS.gene046409 |
| chr5.1 | mRNA | 22366777 | 22370360 | 22366777 | ID=MS.gene046409.t1;Parent=MS.gene046409 |
| chr5.1 | exon | 22366777 | 22367876 | 22366777 | ID=MS.gene046409.t1.exon1;Parent=MS.gene046409.t1 |
| chr5.1 | CDS | 22366777 | 22367876 | 22366777 | ID=cds.MS.gene046409.t1;Parent=MS.gene046409.t1 |
| chr5.1 | exon | 22368329 | 22368570 | 22368329 | ID=MS.gene046409.t1.exon2;Parent=MS.gene046409.t1 |
| chr5.1 | CDS | 22368329 | 22368570 | 22368329 | ID=cds.MS.gene046409.t1;Parent=MS.gene046409.t1 |
| chr5.1 | exon | 22368918 | 22369021 | 22368918 | ID=MS.gene046409.t1.exon3;Parent=MS.gene046409.t1 |
| chr5.1 | CDS | 22368918 | 22369021 | 22368918 | ID=cds.MS.gene046409.t1;Parent=MS.gene046409.t1 |
| chr5.1 | exon | 22369831 | 22369962 | 22369831 | ID=MS.gene046409.t1.exon4;Parent=MS.gene046409.t1 |
| chr5.1 | CDS | 22369831 | 22369962 | 22369831 | ID=cds.MS.gene046409.t1;Parent=MS.gene046409.t1 |
| chr5.1 | exon | 22370110 | 22370208 | 22370110 | ID=MS.gene046409.t1.exon5;Parent=MS.gene046409.t1 |
| chr5.1 | CDS | 22370110 | 22370208 | 22370110 | ID=cds.MS.gene046409.t1;Parent=MS.gene046409.t1 |
| chr5.1 | exon | 22370316 | 22370360 | 22370316 | ID=MS.gene046409.t1.exon6;Parent=MS.gene046409.t1 |
| chr5.1 | CDS | 22370316 | 22370360 | 22370316 | ID=cds.MS.gene046409.t1;Parent=MS.gene046409.t1 |
| Gene Sequence |
| Protein sequence |
