Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76207.t1 | XP_013470301.1 | 94.9 | 569 | 26 | 1 | 1 | 566 | 1 | 569 | 0.00E+00 | 1099 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76207.t1 | Q8RY59 | 42.7 | 536 | 271 | 14 | 51 | 567 | 55 | 573 | 6.9e-107 | 389.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76207.t1 | A0A072VQR8 | 94.9 | 569 | 26 | 1 | 1 | 566 | 1 | 569 | 0.0e+00 | 1099.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene046444 | MS.gene76207 | PPI |
| MS.gene76207 | MS.gene069103 | PPI |
| MS.gene76207 | MS.gene032270 | PPI |
| MS.gene36039 | MS.gene76207 | PPI |
| MS.gene070678 | MS.gene76207 | PPI |
| MS.gene76207 | MS.gene027783 | PPI |
| MS.gene070621 | MS.gene76207 | PPI |
| MS.gene76207 | MS.gene029308 | PPI |
| MS.gene76207 | MS.gene046409 | PPI |
| MS.gene79552 | MS.gene76207 | PPI |
| MS.gene76207 | MS.gene065039 | PPI |
| MS.gene34237 | MS.gene76207 | PPI |
| MS.gene76207 | MS.gene001066 | PPI |
| MS.gene76207 | MS.gene021778 | PPI |
| MS.gene76207 | MS.gene046455 | PPI |
| MS.gene007901 | MS.gene76207 | PPI |
| MS.gene74956 | MS.gene76207 | PPI |
| MS.gene057563 | MS.gene76207 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76207.t1 | MTR_1g112330 | 94.903 | 569 | 26 | 1 | 1 | 566 | 1 | 569 | 0.0 | 1124 |
| MS.gene76207.t1 | MTR_1g112330 | 94.552 | 569 | 25 | 2 | 1 | 566 | 1 | 566 | 0.0 | 1114 |
| MS.gene76207.t1 | MTR_1g112330 | 94.945 | 455 | 20 | 1 | 1 | 452 | 1 | 455 | 0.0 | 904 |
| MS.gene76207.t1 | MTR_5g032190 | 75.648 | 579 | 129 | 5 | 1 | 575 | 1 | 571 | 0.0 | 882 |
| MS.gene76207.t1 | MTR_5g032190 | 79.141 | 489 | 92 | 3 | 1 | 486 | 1 | 482 | 0.0 | 790 |
| MS.gene76207.t1 | MTR_5g032190 | 79.296 | 483 | 90 | 3 | 1 | 480 | 1 | 476 | 0.0 | 783 |
| MS.gene76207.t1 | MTR_7g011550 | 45.213 | 564 | 263 | 9 | 1 | 556 | 1 | 526 | 2.22e-150 | 444 |
| MS.gene76207.t1 | MTR_5g029580 | 43.519 | 324 | 170 | 3 | 238 | 556 | 27 | 342 | 9.60e-87 | 273 |
| MS.gene76207.t1 | MTR_4g105740 | 31.333 | 300 | 158 | 8 | 273 | 564 | 46 | 305 | 5.21e-41 | 151 |
| MS.gene76207.t1 | MTR_4g105740 | 31.849 | 292 | 151 | 8 | 273 | 556 | 46 | 297 | 5.43e-41 | 150 |
| MS.gene76207.t1 | MTR_3g077870 | 30.205 | 341 | 180 | 10 | 223 | 552 | 9 | 302 | 3.06e-40 | 149 |
| MS.gene76207.t1 | MTR_8g088250 | 29.352 | 293 | 155 | 8 | 277 | 556 | 26 | 279 | 8.31e-33 | 127 |
| MS.gene76207.t1 | MTR_2g090130 | 40.559 | 143 | 50 | 1 | 280 | 422 | 110 | 217 | 1.00e-26 | 108 |
| MS.gene76207.t1 | MTR_2g090130 | 62.295 | 61 | 23 | 0 | 101 | 161 | 43 | 103 | 5.37e-21 | 92.0 |
| MS.gene76207.t1 | MTR_7g011640 | 45.455 | 110 | 41 | 2 | 101 | 210 | 15 | 105 | 5.71e-22 | 92.8 |
| MS.gene76207.t1 | MTR_7g011880 | 33.939 | 165 | 77 | 3 | 371 | 535 | 54 | 186 | 2.73e-20 | 89.4 |
| MS.gene76207.t1 | MTR_7g061850 | 39.583 | 96 | 53 | 1 | 239 | 329 | 28 | 123 | 9.56e-15 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76207.t1 | AT1G32230 | 42.884 | 527 | 267 | 12 | 51 | 559 | 55 | 565 | 1.51e-131 | 396 |
| MS.gene76207.t1 | AT1G32230 | 42.804 | 535 | 271 | 13 | 51 | 567 | 55 | 572 | 3.27e-131 | 396 |
| MS.gene76207.t1 | AT1G32230 | 42.804 | 535 | 271 | 13 | 51 | 567 | 55 | 572 | 3.27e-131 | 396 |
| MS.gene76207.t1 | AT1G32230 | 42.804 | 535 | 271 | 13 | 51 | 567 | 55 | 572 | 3.27e-131 | 396 |
| MS.gene76207.t1 | AT1G32230 | 42.804 | 535 | 271 | 13 | 51 | 567 | 55 | 572 | 3.27e-131 | 396 |
| MS.gene76207.t1 | AT1G32230 | 42.724 | 536 | 271 | 13 | 51 | 567 | 55 | 573 | 4.60e-131 | 395 |
| MS.gene76207.t1 | AT2G35510 | 39.212 | 584 | 309 | 14 | 1 | 559 | 1 | 563 | 7.27e-118 | 361 |
| MS.gene76207.t1 | AT2G35510 | 39.212 | 584 | 309 | 14 | 1 | 559 | 1 | 563 | 7.27e-118 | 361 |
| MS.gene76207.t1 | AT2G35510 | 40.605 | 463 | 252 | 10 | 1 | 452 | 1 | 451 | 5.76e-104 | 321 |
| MS.gene76207.t1 | AT1G23550 | 31.834 | 289 | 150 | 7 | 275 | 552 | 56 | 308 | 3.33e-40 | 149 |
| MS.gene76207.t1 | AT1G70440 | 27.761 | 335 | 188 | 7 | 236 | 556 | 6 | 300 | 2.55e-35 | 135 |
| MS.gene76207.t1 | AT1G70440 | 27.761 | 335 | 188 | 7 | 236 | 556 | 6 | 300 | 2.55e-35 | 135 |
| MS.gene76207.t1 | AT5G62520 | 26.587 | 252 | 137 | 4 | 305 | 552 | 89 | 296 | 2.63e-26 | 109 |
| MS.gene76207.t1 | AT5G62520 | 33.562 | 146 | 88 | 3 | 305 | 446 | 89 | 229 | 1.50e-21 | 94.4 |
| MS.gene76207.t1 | AT3G47720 | 25.092 | 271 | 141 | 7 | 302 | 561 | 91 | 310 | 2.56e-20 | 92.4 |
Find 125 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAATTTGAACATGCTTAA+AGG | 0.183373 | 1.1:+79445857 | None:intergenic |
| TATTGCGATGTTGACGAAAA+TGG | 0.184170 | 1.1:-79444950 | MS.gene76207:CDS |
| AATGAAATTAAATTACATTT+AGG | 0.198704 | 1.1:-79445942 | MS.gene76207:CDS |
| TCGGAAGCAGCATAAATTTC+AGG | 0.217736 | 1.1:+79446032 | None:intergenic |
| CATTTAGGAATTGAAATAAA+TGG | 0.231625 | 1.1:-79445927 | MS.gene76207:CDS |
| TTCAAAATCATTATGATTGC+AGG | 0.266216 | 1.1:+79445824 | None:intergenic |
| GCATATAATGAAATTGTATA+TGG | 0.291709 | 1.1:-79445723 | MS.gene76207:CDS |
| TTGAAACTAACAACAAATTC+TGG | 0.295864 | 1.1:+79444758 | None:intergenic |
| TTTGATCACACAAGATGATT+TGG | 0.296495 | 1.1:+79443508 | None:intergenic |
| TCCACAGGATGCTGTTGATT+TGG | 0.304882 | 1.1:-79446210 | MS.gene76207:CDS |
| TGATAGACCATCAAACGTTC+TGG | 0.312618 | 1.1:+79446254 | None:intergenic |
| ATCATCTTGTGTGATCAAAA+TGG | 0.313574 | 1.1:-79443504 | MS.gene76207:CDS |
| TGTATATGGAAAGTTGGATT+TGG | 0.313935 | 1.1:-79445709 | MS.gene76207:CDS |
| CCGTGTAATAATGGGGAATA+TGG | 0.323010 | 1.1:-79444906 | MS.gene76207:CDS |
| TGTGCAAAAGATGTTTCTTA+AGG | 0.323221 | 1.1:-79445682 | MS.gene76207:CDS |
| AAATGTAATTTAATTTCATT+AGG | 0.344899 | 1.1:+79445945 | None:intergenic |
| TGTTTGACAACCTTGTTTCT+TGG | 0.346772 | 1.1:+79446377 | None:intergenic |
| ATATGTACCATCTGCACTTC+AGG | 0.348991 | 1.1:-79443930 | MS.gene76207:CDS |
| GTGCAAAAGATGTTTCTTAA+GGG | 0.359591 | 1.1:-79445681 | MS.gene76207:CDS |
| TATCAGATGAATTTGAAATC+TGG | 0.365305 | 1.1:-79446104 | MS.gene76207:CDS |
| ATATGACTCTCTGATTTCAT+TGG | 0.368978 | 1.1:+79446326 | None:intergenic |
| AGAATTTGTTGTTAGTTTCA+AGG | 0.376305 | 1.1:-79444756 | MS.gene76207:CDS |
| CATAGTAGGTAATTCTCCTT+TGG | 0.389922 | 1.1:+79445515 | None:intergenic |
| TGAAATTGTATATGGAAAGT+TGG | 0.390031 | 1.1:-79445715 | MS.gene76207:CDS |
| CGTTTGATGGTCTATCAAAA+TGG | 0.393202 | 1.1:-79446248 | MS.gene76207:CDS |
| ATTGCGATGTTGACGAAAAT+GGG | 0.394816 | 1.1:-79444949 | MS.gene76207:CDS |
| GGAGTAGGTGCATCCAAGTT+GGG | 0.410633 | 1.1:-79445906 | MS.gene76207:CDS |
| ACAACGGAAAGGCGTCTAAC+AGG | 0.411555 | 1.1:-79446499 | MS.gene76207:CDS |
| ATGAAATCAGAGAGTCATAT+TGG | 0.412100 | 1.1:-79446323 | MS.gene76207:CDS |
| GTTGAGCAAAATAAAAGTAT+AGG | 0.412784 | 1.1:-79445753 | MS.gene76207:CDS |
| AGCAGTAATAACATGGGAAA+TGG | 0.415932 | 1.1:-79445792 | MS.gene76207:CDS |
| AAGATGTTTCTTAAGGGAAC+TGG | 0.416920 | 1.1:-79445675 | MS.gene76207:CDS |
| GCCTTATGATCTCTGCAATC+AGG | 0.430030 | 1.1:-79446003 | MS.gene76207:CDS |
| ATGCTAATGTTCGTTATGCT+TGG | 0.432574 | 1.1:-79445548 | MS.gene76207:CDS |
| TACCTACTATGATGAATTGT+GGG | 0.442922 | 1.1:-79445503 | MS.gene76207:CDS |
| GATAGACCATCAAACGTTCT+GGG | 0.444240 | 1.1:+79446255 | None:intergenic |
| TCCTGATTGCAGAGATCATA+AGG | 0.444505 | 1.1:+79446002 | None:intergenic |
| TACATCGGTGCAGTCGCGAT+TGG | 0.445376 | 1.1:-79445616 | MS.gene76207:CDS |
| ATTTAATTTCATTAGGACCT+TGG | 0.447429 | 1.1:+79445952 | None:intergenic |
| ATTTATGCTGCTTCCGATGA+AGG | 0.448045 | 1.1:-79446026 | MS.gene76207:CDS |
| TACATGTTCAAATGAAACTC+TGG | 0.452886 | 1.1:-79446435 | MS.gene76207:CDS |
| GTTTGCAACAACCTATTGCT+TGG | 0.460581 | 1.1:-79446082 | MS.gene76207:CDS |
| AGGATGCTGTTGATTTGGTT+AGG | 0.460743 | 1.1:-79446205 | MS.gene76207:CDS |
| TGAAGTGCAGATGGTACATA+TGG | 0.467187 | 1.1:+79443932 | None:intergenic |
| TAGAAATTCAACCTGGCAAA+AGG | 0.470103 | 1.1:+79445408 | None:intergenic |
| TGCAATCAGGACAGCAGAAA+AGG | 0.471869 | 1.1:-79445990 | MS.gene76207:CDS |
| GTCAAACATATGAGATTGAA+AGG | 0.473888 | 1.1:-79446362 | MS.gene76207:CDS |
| GTCTCATCAATCCAAGCAAT+AGG | 0.480763 | 1.1:+79446071 | None:intergenic |
| CTCTTGCGAGCTACATTACC+TGG | 0.482989 | 1.1:-79443755 | MS.gene76207:CDS |
| TGGAAGCCCAGAACGTTTGA+TGG | 0.484841 | 1.1:-79446261 | MS.gene76207:CDS |
| ATATTGGACGATCGTTGGTT+AGG | 0.486121 | 1.1:-79446307 | MS.gene76207:CDS |
| ACTATCATAGTCACTACTAC+TGG | 0.487570 | 1.1:+79444850 | None:intergenic |
| GATGCACATTGAGGTAATAC+TGG | 0.491734 | 1.1:+79446410 | None:intergenic |
| CGGAAGCAGCATAAATTTCA+GGG | 0.494199 | 1.1:+79446033 | None:intergenic |
| GCTTGGCTTGCTTCTTCCAA+AGG | 0.498253 | 1.1:-79445531 | MS.gene76207:CDS |
| AGTAGTAGTGACTATGATAG+TGG | 0.498552 | 1.1:-79444848 | MS.gene76207:CDS |
| AATATGGAGCTTCTCCATCC+TGG | 0.503567 | 1.1:-79444890 | MS.gene76207:CDS |
| TGGAGTAGGTGCATCCAAGT+TGG | 0.506701 | 1.1:-79445907 | MS.gene76207:CDS |
| ATACCTCAGGGAATTCCAAC+TGG | 0.510962 | 1.1:-79444048 | MS.gene76207:intron |
| TATGTACCATCTGCACTTCA+GGG | 0.512959 | 1.1:-79443929 | MS.gene76207:intron |
| GCTGTGGAGGTAGAGTTAAA+TGG | 0.513139 | 1.1:-79446158 | MS.gene76207:CDS |
| GGAATTGAAATAAATGGAGT+AGG | 0.514253 | 1.1:-79445921 | MS.gene76207:CDS |
| AACATGGGAAATGGAAGTGT+TGG | 0.515790 | 1.1:-79445783 | MS.gene76207:CDS |
| AACATGCTTAAAGGTGACAT+TGG | 0.523449 | 1.1:+79445866 | None:intergenic |
| GGTCATGAATCTTTGTTCCA+AGG | 0.527808 | 1.1:-79445969 | MS.gene76207:CDS |
| AAAAGTCCAGCACAAGATGA+TGG | 0.528460 | 1.1:+79446135 | None:intergenic |
| TCCACTCACATCCCAAAAGA+AGG | 0.531626 | 1.1:+79444386 | None:intergenic |
| CAACAAATTCTGGATAGATG+TGG | 0.532982 | 1.1:+79444768 | None:intergenic |
| GGGGTTAATTCAGCTAGCCA+TGG | 0.534332 | 1.1:-79444349 | MS.gene76207:CDS |
| ACTATGATGAATTGTGGGCT+TGG | 0.536837 | 1.1:-79445498 | MS.gene76207:CDS |
| ATTCAACCTGGCAAAAGGAC+AGG | 0.542093 | 1.1:+79445413 | None:intergenic |
| TATATGAATTATAAGAAGAG+TGG | 0.543460 | 1.1:-79446281 | MS.gene76207:CDS |
| ATAAGTTTCATATCCTCTGC+AGG | 0.543701 | 1.1:+79443955 | None:intergenic |
| CTATCAAAATGGTGGATGGA+AGG | 0.546660 | 1.1:-79446237 | MS.gene76207:CDS |
| GTAGTAGTGACTATGATAGT+GGG | 0.547301 | 1.1:-79444847 | MS.gene76207:CDS |
| GGACGGTACTGTCTAGTGCC+AGG | 0.550759 | 1.1:+79444872 | None:intergenic |
| AAATGGCCATCATCTTGTGC+TGG | 0.555550 | 1.1:-79446141 | MS.gene76207:CDS |
| CTATCATAGTCACTACTACT+GGG | 0.559417 | 1.1:+79444851 | None:intergenic |
| CTGCACCGATGTACTTGAGA+AGG | 0.562181 | 1.1:+79445626 | None:intergenic |
| GAGTAGGTGCATCCAAGTTG+GGG | 0.564548 | 1.1:-79445905 | MS.gene76207:CDS |
| AGCCCACAATTCATCATAGT+AGG | 0.565165 | 1.1:+79445501 | None:intergenic |
| TTTATGCTGCTTCCGATGAA+GGG | 0.565221 | 1.1:-79446025 | MS.gene76207:CDS |
| TTACCTACTATGATGAATTG+TGG | 0.565459 | 1.1:-79445504 | MS.gene76207:CDS |
| AAGGTCTCTTCTGATGCTGA+AGG | 0.569414 | 1.1:-79444737 | MS.gene76207:intron |
| AACAAATTCTGGATAGATGT+GGG | 0.570653 | 1.1:+79444769 | None:intergenic |
| ATTGCTTGGATTGATGAGAC+AGG | 0.571658 | 1.1:-79446068 | MS.gene76207:CDS |
| TGAAGATAGCAGTAATAACA+TGG | 0.572879 | 1.1:-79445799 | MS.gene76207:CDS |
| CGTTCAGAGTCTTCGAGAGT+AGG | 0.575834 | 1.1:-79444310 | MS.gene76207:CDS |
| TCTAAATGCATGCATGGCAT+TGG | 0.576632 | 1.1:-79445456 | MS.gene76207:CDS |
| TGCACCGATGTACTTGAGAA+GGG | 0.577902 | 1.1:+79445627 | None:intergenic |
| ACCTTGTGTTGAAGAAGACC+AGG | 0.580336 | 1.1:+79443737 | None:intergenic |
| CATAAACAAGGTTCCTGCAG+AGG | 0.585357 | 1.1:-79443968 | MS.gene76207:CDS |
| CCATATTCCCCATTATTACA+CGG | 0.586757 | 1.1:+79444906 | None:intergenic |
| ACATGTTCAAATGAAACTCT+GGG | 0.587079 | 1.1:-79446434 | MS.gene76207:CDS |
| TCTGCATCTAAATGCATGCA+TGG | 0.588450 | 1.1:-79445462 | MS.gene76207:CDS |
| GGTACTGTCTAGTGCCAGGA+TGG | 0.592202 | 1.1:+79444876 | None:intergenic |
| TCAAACATATGAGATTGAAA+GGG | 0.594105 | 1.1:-79446361 | MS.gene76207:CDS |
| AACATACCCTGAAGTGCAGA+TGG | 0.595712 | 1.1:+79443923 | None:intergenic |
| GAGATCATAAGGCCCTTCAT+CGG | 0.599029 | 1.1:+79446013 | None:intergenic |
| GAAGCTTCAGGCGAACCAGT+TGG | 0.600300 | 1.1:+79444033 | None:intergenic |
| GTTATTAGTGATGCACATTG+AGG | 0.605544 | 1.1:+79446401 | None:intergenic |
| TGGTCTATCAAAATGGTGGA+TGG | 0.608244 | 1.1:-79446241 | MS.gene76207:CDS |
| TGATGTAAAGAAAGCAGCTG+TGG | 0.610026 | 1.1:-79446174 | MS.gene76207:CDS |
| GAGTCATATTGGACGATCGT+TGG | 0.611529 | 1.1:-79446312 | MS.gene76207:CDS |
| ACCTGGTCTTCTTCAACACA+AGG | 0.612227 | 1.1:-79443738 | MS.gene76207:intron |
| TTGCGATGTTGACGAAAATG+GGG | 0.614839 | 1.1:-79444948 | MS.gene76207:CDS |
| ACTAATAACACCAAGAAACA+AGG | 0.615567 | 1.1:-79446387 | MS.gene76207:CDS |
| GGAATGTGCTTAATCTGAAG+CGG | 0.619402 | 1.1:-79446478 | MS.gene76207:CDS |
| TGTAAAGAAAGCAGCTGTGG+AGG | 0.623964 | 1.1:-79446171 | MS.gene76207:CDS |
| TGGATGGAAGGACTTTCCAC+AGG | 0.627657 | 1.1:-79446225 | MS.gene76207:CDS |
| CATAGTCACTACTACTGGGA+CGG | 0.629627 | 1.1:+79444855 | None:intergenic |
| ACCAAATCAACAGCATCCTG+TGG | 0.639973 | 1.1:+79446209 | None:intergenic |
| GAAGATAGCAGTAATAACAT+GGG | 0.640382 | 1.1:-79445798 | MS.gene76207:CDS |
| GCACCGATGTACTTGAGAAG+GGG | 0.647364 | 1.1:+79445628 | None:intergenic |
| TTACCCCTTCTCAAGTACAT+CGG | 0.652782 | 1.1:-79445631 | MS.gene76207:CDS |
| TGCATGCATTTAGATGCAGA+TGG | 0.653425 | 1.1:+79445465 | None:intergenic |
| TTGCTTGGATTGATGAGACA+GGG | 0.654779 | 1.1:-79446067 | MS.gene76207:CDS |
| CATGGAAGCAAACAACGGAA+AGG | 0.655703 | 1.1:-79446510 | MS.gene76207:CDS |
| GTGATCAAAATGGAATCTTG+AGG | 0.658713 | 1.1:-79443494 | None:intergenic |
| TAGTGACTATGATAGTGGGG+TGG | 0.665276 | 1.1:-79444843 | MS.gene76207:CDS |
| TTGATGGTCTATCAAAATGG+TGG | 0.667750 | 1.1:-79446245 | MS.gene76207:CDS |
| TAGTAGTGACTATGATAGTG+GGG | 0.676289 | 1.1:-79444846 | MS.gene76207:CDS |
| ATAAACATGGAAGCAAACAA+CGG | 0.703722 | 1.1:-79446515 | None:intergenic |
| AGTAGGTGCATCCAAGTTGG+GGG | 0.717707 | 1.1:-79445904 | MS.gene76207:CDS |
| ACTCTCGAAGACTCTGAACG+TGG | 0.722742 | 1.1:+79444313 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAAATTAAATTACATTT+AGG | - | chr1.1:79444063-79444082 | MS.gene76207:intron | 10.0% |
| !!! | AAATGTAATTTAATTTCATT+AGG | + | chr1.1:79444063-79444082 | None:intergenic | 10.0% |
| !! | CCATTCTTAAATAAAATAAT+TGG | + | chr1.1:79444754-79444773 | None:intergenic | 15.0% |
| !! | CTTATTATAATATTGGTATA+TGG | - | chr1.1:79445378-79445397 | MS.gene76207:intron | 15.0% |
| !! | TAATATTATAGAACATTTCA+AGG | + | chr1.1:79444855-79444874 | None:intergenic | 15.0% |
| !!! | CCAATTATTTTATTTAAGAA+TGG | - | chr1.1:79444751-79444770 | MS.gene76207:CDS | 15.0% |
| !!! | TACATTTTCTTAACAAAAAA+AGG | - | chr1.1:79445333-79445352 | MS.gene76207:intron | 15.0% |
| !!! | TTTTTTACTGTTTTTTTATC+TGG | - | chr1.1:79445859-79445878 | MS.gene76207:CDS | 15.0% |
| !! | AAGAAAAAAATGGATAGAAT+AGG | + | chr1.1:79445361-79445380 | None:intergenic | 20.0% |
| !! | ACCGATGTATAAATAAATAA+GGG | + | chr1.1:79444917-79444936 | None:intergenic | 20.0% |
| !! | ATAAATAAATAAGGGGAAAA+AGG | + | chr1.1:79444909-79444928 | None:intergenic | 20.0% |
| !! | ATATGTCCTAATTGTTTAAA+TGG | - | chr1.1:79446457-79446476 | MS.gene76207:CDS | 20.0% |
| !! | CATTTAGGAATTGAAATAAA+TGG | - | chr1.1:79444078-79444097 | MS.gene76207:intron | 20.0% |
| !! | GCATATAATGAAATTGTATA+TGG | - | chr1.1:79444282-79444301 | MS.gene76207:intron | 20.0% |
| !! | TATATGAATTATAAGAAGAG+TGG | - | chr1.1:79443724-79443743 | MS.gene76207:intron | 20.0% |
| !!! | AGTGGAAGAATAATATTTTT+GGG | - | chr1.1:79445636-79445655 | MS.gene76207:CDS | 20.0% |
| !!! | ATGATTTTTTGAAAAAGTTG+AGG | - | chr1.1:79446209-79446228 | MS.gene76207:CDS | 20.0% |
| !!! | TAACTAGTTGATATATGATT+CGG | - | chr1.1:79445424-79445443 | MS.gene76207:CDS | 20.0% |
| !!! | TATACTTTTATTTTGCTCAA+CGG | + | chr1.1:79444253-79444272 | None:intergenic | 20.0% |
| ! | AATAACTAGCACTGTAAATA+AGG | + | chr1.1:79445039-79445058 | None:intergenic | 25.0% |
| ! | AATATTGTTGAAGTTATCCT+AGG | - | chr1.1:79444662-79444681 | MS.gene76207:intron | 25.0% |
| ! | ATCAATTTGAACATGCTTAA+AGG | + | chr1.1:79444151-79444170 | None:intergenic | 25.0% |
| ! | ATGAAGCCATTTAAACAATT+AGG | + | chr1.1:79446466-79446485 | None:intergenic | 25.0% |
| ! | ATTGGTATATGGTACTTAAT+GGG | - | chr1.1:79445389-79445408 | MS.gene76207:intron | 25.0% |
| ! | CACCGATGTATAAATAAATA+AGG | + | chr1.1:79444918-79444937 | None:intergenic | 25.0% |
| ! | CCGATGTATAAATAAATAAG+GGG | + | chr1.1:79444916-79444935 | None:intergenic | 25.0% |
| ! | CTGAAATTACGAAAAATTGT+CGG | - | chr1.1:79444430-79444449 | MS.gene76207:intron | 25.0% |
| ! | TATTGGTATATGGTACTTAA+TGG | - | chr1.1:79445388-79445407 | MS.gene76207:intron | 25.0% |
| ! | TCAAACATATGAGATTGAAA+GGG | - | chr1.1:79443644-79443663 | MS.gene76207:intron | 25.0% |
| ! | TCTAGATTATTCGTTGTAAT+GGG | - | chr1.1:79444993-79445012 | MS.gene76207:intron | 25.0% |
| ! | TGAAATTACGAAAAATTGTC+GGG | - | chr1.1:79444431-79444450 | MS.gene76207:intron | 25.0% |
| ! | TGAAATTGTATATGGAAAGT+TGG | - | chr1.1:79444290-79444309 | MS.gene76207:intron | 25.0% |
| ! | TTCAAAATCATTATGATTGC+AGG | + | chr1.1:79444184-79444203 | None:intergenic | 25.0% |
| ! | TTCCATACTAAAAAGTTTCT+TGG | + | chr1.1:79445202-79445221 | None:intergenic | 25.0% |
| ! | TTCTAGATTATTCGTTGTAA+TGG | - | chr1.1:79444992-79445011 | MS.gene76207:intron | 25.0% |
| ! | TTGAAACTAACAACAAATTC+TGG | + | chr1.1:79445250-79445269 | None:intergenic | 25.0% |
| !! | ATAATTGGTCTAGAAATCAA+AGG | + | chr1.1:79444739-79444758 | None:intergenic | 25.0% |
| !! | ATTTAATTTCATTAGGACCT+TGG | + | chr1.1:79444056-79444075 | None:intergenic | 25.0% |
| !! | CCAATCAGTTTTTGAATTAT+GGG | - | chr1.1:79445934-79445953 | MS.gene76207:CDS | 25.0% |
| !! | CCCCTTATTTATTTATACAT+CGG | - | chr1.1:79444913-79444932 | MS.gene76207:CDS | 25.0% |
| !! | GAGTGGAAGAATAATATTTT+TGG | - | chr1.1:79445635-79445654 | MS.gene76207:CDS | 25.0% |
| !! | GTTGAGCAAAATAAAAGTAT+AGG | - | chr1.1:79444252-79444271 | MS.gene76207:intron | 25.0% |
| !! | TATCAGATGAATTTGAAATC+TGG | - | chr1.1:79443901-79443920 | MS.gene76207:intron | 25.0% |
| !! | TCCAATCAGTTTTTGAATTA+TGG | - | chr1.1:79445933-79445952 | MS.gene76207:CDS | 25.0% |
| !!! | AGAATTTGTTGTTAGTTTCA+AGG | - | chr1.1:79445249-79445268 | MS.gene76207:intron | 25.0% |
| !!! | ATCCAAGAAACTTTTTAGTA+TGG | - | chr1.1:79445197-79445216 | MS.gene76207:intron | 25.0% |
| !!! | ATTGTTTTATGTTAATCACC+AGG | - | chr1.1:79446168-79446187 | MS.gene76207:CDS | 25.0% |
| !!! | GTGGAAGAATAATATTTTTG+GGG | - | chr1.1:79445637-79445656 | MS.gene76207:CDS | 25.0% |
| !!! | TATATCATGCGTTTTTTTAC+AGG | - | chr1.1:79445596-79445615 | MS.gene76207:CDS | 25.0% |
| !!! | TGTTTTTTTATCTGGAGTTT+TGG | - | chr1.1:79445867-79445886 | MS.gene76207:CDS | 25.0% |
| AAACAAGTTTCCAAAAGGAA+CGG | + | chr1.1:79445560-79445579 | None:intergenic | 30.0% | |
| AAATTACGAAAAATTGTCGG+GGG | - | chr1.1:79444433-79444452 | MS.gene76207:intron | 30.0% | |
| AACAAATTCTGGATAGATGT+GGG | + | chr1.1:79445239-79445258 | None:intergenic | 30.0% | |
| ACATGTTCAAATGAAACTCT+GGG | - | chr1.1:79443571-79443590 | MS.gene76207:intron | 30.0% | |
| ACTAATAACACCAAGAAACA+AGG | - | chr1.1:79443618-79443637 | MS.gene76207:intron | 30.0% | |
| ATATGACTCTCTGATTTCAT+TGG | + | chr1.1:79443682-79443701 | None:intergenic | 30.0% | |
| ATCATCTTGTGTGATCAAAA+TGG | - | chr1.1:79446501-79446520 | MS.gene76207:CDS | 30.0% | |
| ATGAAATCAGAGAGTCATAT+TGG | - | chr1.1:79443682-79443701 | MS.gene76207:intron | 30.0% | |
| CCCATAATTCAAAAACTGAT+TGG | + | chr1.1:79445937-79445956 | None:intergenic | 30.0% | |
| CTAAAAAGTTTCTTGGATTG+TGG | + | chr1.1:79445195-79445214 | None:intergenic | 30.0% | |
| GAAAGAAACAAGTTTCCAAA+AGG | + | chr1.1:79445565-79445584 | None:intergenic | 30.0% | |
| GAAATTACGAAAAATTGTCG+GGG | - | chr1.1:79444432-79444451 | MS.gene76207:intron | 30.0% | |
| GAAGATAGCAGTAATAACAT+GGG | - | chr1.1:79444207-79444226 | MS.gene76207:intron | 30.0% | |
| GGAATTGAAATAAATGGAGT+AGG | - | chr1.1:79444084-79444103 | MS.gene76207:intron | 30.0% | |
| GTCAAACATATGAGATTGAA+AGG | - | chr1.1:79443643-79443662 | MS.gene76207:intron | 30.0% | |
| GTGCAAAAGATGTTTCTTAA+GGG | - | chr1.1:79444324-79444343 | MS.gene76207:CDS | 30.0% | |
| TACATGTTCAAATGAAACTC+TGG | - | chr1.1:79443570-79443589 | MS.gene76207:intron | 30.0% | |
| TACCAAATTTCCTTTGTGAA+AGG | - | chr1.1:79445763-79445782 | MS.gene76207:CDS | 30.0% | |
| TACCTACTATGATGAATTGT+GGG | - | chr1.1:79444502-79444521 | MS.gene76207:intron | 30.0% | |
| TACTAATATATCTCTCTGCA+TGG | - | chr1.1:79444779-79444798 | MS.gene76207:CDS | 30.0% | |
| TCACAAAGGAAATTTGGTAT+TGG | + | chr1.1:79445762-79445781 | None:intergenic | 30.0% | |
| TGAAGATAGCAGTAATAACA+TGG | - | chr1.1:79444206-79444225 | MS.gene76207:intron | 30.0% | |
| TGATGATTAGAAATTCAACC+TGG | + | chr1.1:79444607-79444626 | None:intergenic | 30.0% | |
| TGTATATGGAAAGTTGGATT+TGG | - | chr1.1:79444296-79444315 | MS.gene76207:intron | 30.0% | |
| TGTGCAAAAGATGTTTCTTA+AGG | - | chr1.1:79444323-79444342 | MS.gene76207:CDS | 30.0% | |
| TTACCTACTATGATGAATTG+TGG | - | chr1.1:79444501-79444520 | MS.gene76207:intron | 30.0% | |
| TTTGATCACACAAGATGATT+TGG | + | chr1.1:79446500-79446519 | None:intergenic | 30.0% | |
| ! | AATTTGATAGTTGTGTTGCA+TGG | - | chr1.1:79444877-79444896 | MS.gene76207:CDS | 30.0% |
| ! | TTTTGCTGCTATCATAAACA+AGG | - | chr1.1:79446025-79446044 | MS.gene76207:CDS | 30.0% |
| !!! | TTTTTTACAGGCCTTCTTTT+GGG | - | chr1.1:79445608-79445627 | MS.gene76207:CDS | 30.0% |
| !!! | TTTTTTTACAGGCCTTCTTT+TGG | - | chr1.1:79445607-79445626 | MS.gene76207:CDS | 30.0% |
| AAAAAGTTGAGGTCAGTTGT+GGG | - | chr1.1:79446220-79446239 | MS.gene76207:CDS | 35.0% | |
| AAATAAGGGGAAAAAGGTTC+TGG | + | chr1.1:79444903-79444922 | None:intergenic | 35.0% | |
| AAATACACTGCCTTTCACAA+AGG | + | chr1.1:79445776-79445795 | None:intergenic | 35.0% | |
| AACATGCTTAAAGGTGACAT+TGG | + | chr1.1:79444142-79444161 | None:intergenic | 35.0% | |
| AAGATGTTTCTTAAGGGAAC+TGG | - | chr1.1:79444330-79444349 | MS.gene76207:CDS | 35.0% | |
| AATTACGAAAAATTGTCGGG+GGG | - | chr1.1:79444434-79444453 | MS.gene76207:intron | 35.0% | |
| ACTATCATAGTCACTACTAC+TGG | + | chr1.1:79445158-79445177 | None:intergenic | 35.0% | |
| AGATATCAATTAAGACCGAG+AGG | + | chr1.1:79446133-79446152 | None:intergenic | 35.0% | |
| AGCAGTAATAACATGGGAAA+TGG | - | chr1.1:79444213-79444232 | MS.gene76207:intron | 35.0% | |
| AGTAGTAGTGACTATGATAG+TGG | - | chr1.1:79445157-79445176 | MS.gene76207:intron | 35.0% | |
| ATAAGTTTCATATCCTCTGC+AGG | + | chr1.1:79446053-79446072 | None:intergenic | 35.0% | |
| ATGCTAATGTTCGTTATGCT+TGG | - | chr1.1:79444457-79444476 | MS.gene76207:intron | 35.0% | |
| ATTGCGATGTTGACGAAAAT+GGG | - | chr1.1:79445056-79445075 | MS.gene76207:intron | 35.0% | |
| CAACAAATTCTGGATAGATG+TGG | + | chr1.1:79445240-79445259 | None:intergenic | 35.0% | |
| CATAGTAGGTAATTCTCCTT+TGG | + | chr1.1:79444493-79444512 | None:intergenic | 35.0% | |
| CCATATTCCCCATTATTACA+CGG | + | chr1.1:79445102-79445121 | None:intergenic | 35.0% | |
| CTATCATAGTCACTACTACT+GGG | + | chr1.1:79445157-79445176 | None:intergenic | 35.0% | |
| GACAGCTGACAGTAATAATA+GGG | + | chr1.1:79444820-79444839 | None:intergenic | 35.0% | |
| GATATCAATTAAGACCGAGA+GGG | + | chr1.1:79446132-79446151 | None:intergenic | 35.0% | |
| GTAGTAGTGACTATGATAGT+GGG | - | chr1.1:79445158-79445177 | MS.gene76207:intron | 35.0% | |
| GTTATTAGTGATGCACATTG+AGG | + | chr1.1:79443607-79443626 | None:intergenic | 35.0% | |
| TAGAAATTCAACCTGGCAAA+AGG | + | chr1.1:79444600-79444619 | None:intergenic | 35.0% | |
| TATTGCGATGTTGACGAAAA+TGG | - | chr1.1:79445055-79445074 | MS.gene76207:intron | 35.0% | |
| TGACAGCTGACAGTAATAAT+AGG | + | chr1.1:79444821-79444840 | None:intergenic | 35.0% | |
| TGCCTTTCACAAAGGAAATT+TGG | + | chr1.1:79445768-79445787 | None:intergenic | 35.0% | |
| TTAAATAGAGGGGGAAACTT+TGG | + | chr1.1:79446393-79446412 | None:intergenic | 35.0% | |
| TTGAATTATGGGATACCTCA+GGG | - | chr1.1:79445945-79445964 | MS.gene76207:CDS | 35.0% | |
| TTGGTCTAGAAATCAAAGGA+AGG | + | chr1.1:79444735-79444754 | None:intergenic | 35.0% | |
| TTTGAATTATGGGATACCTC+AGG | - | chr1.1:79445944-79445963 | MS.gene76207:CDS | 35.0% | |
| ! | CGTTTGATGGTCTATCAAAA+TGG | - | chr1.1:79443757-79443776 | MS.gene76207:CDS | 35.0% |
| ! | GGAAATTTGGTATTGGAACT+TGG | + | chr1.1:79445755-79445774 | None:intergenic | 35.0% |
| ! | GTCTTTTGCCGTGTAATAAT+GGG | - | chr1.1:79445091-79445110 | MS.gene76207:intron | 35.0% |
| ! | TAGTAGTGACTATGATAGTG+GGG | - | chr1.1:79445159-79445178 | MS.gene76207:intron | 35.0% |
| ! | TCTTTTGCCGTGTAATAATG+GGG | - | chr1.1:79445092-79445111 | MS.gene76207:intron | 35.0% |
| ! | TGTTTGACAACCTTGTTTCT+TGG | + | chr1.1:79443631-79443650 | None:intergenic | 35.0% |
| ! | TTGATGGTCTATCAAAATGG+TGG | - | chr1.1:79443760-79443779 | MS.gene76207:CDS | 35.0% |
| !! | AACACAAGGTACTTTTCTCA+AGG | - | chr1.1:79446281-79446300 | MS.gene76207:CDS | 35.0% |
| !! | GTTATGTAAACTAGCTTTGC+TGG | - | chr1.1:79446102-79446121 | MS.gene76207:CDS | 35.0% |
| !! | TTCGTTGTAATGGGTAGAAA+AGG | - | chr1.1:79445002-79445021 | MS.gene76207:intron | 35.0% |
| !!! | GGCTTTGATTTTTTTCTGCA+AGG | - | chr1.1:79446302-79446321 | MS.gene76207:CDS | 35.0% |
| AAAAGTCCAGCACAAGATGA+TGG | + | chr1.1:79443873-79443892 | None:intergenic | 40.0% | |
| AAAGCGTAGAAAAAGGCAAC+CGG | + | chr1.1:79446007-79446026 | None:intergenic | 40.0% | |
| AACACGACAAATTCAAGCCT+AGG | + | chr1.1:79444682-79444701 | None:intergenic | 40.0% | |
| ACTATGATGAATTGTGGGCT+TGG | - | chr1.1:79444507-79444526 | MS.gene76207:intron | 40.0% | |
| AGAGTCCAGCGTTAAATAGA+GGG | + | chr1.1:79446404-79446423 | None:intergenic | 40.0% | |
| AGCCCACAATTCATCATAGT+AGG | + | chr1.1:79444507-79444526 | None:intergenic | 40.0% | |
| ATATGTACCATCTGCACTTC+AGG | - | chr1.1:79446075-79446094 | MS.gene76207:CDS | 40.0% | |
| ATTGCTTGGATTGATGAGAC+AGG | - | chr1.1:79443937-79443956 | MS.gene76207:CDS | 40.0% | |
| CGGAAGCAGCATAAATTTCA+GGG | + | chr1.1:79443975-79443994 | None:intergenic | 40.0% | |
| CTACGGTTATTTATGCCTTG+AGG | - | chr1.1:79446332-79446351 | MS.gene76207:CDS | 40.0% | |
| GAAAAAGTTGAGGTCAGTTG+TGG | - | chr1.1:79446219-79446238 | MS.gene76207:CDS | 40.0% | |
| GATAGACCATCAAACGTTCT+GGG | + | chr1.1:79443753-79443772 | None:intergenic | 40.0% | |
| GATGAAACCATCCATCCAAA+TGG | + | chr1.1:79445456-79445475 | None:intergenic | 40.0% | |
| GATGCACATTGAGGTAATAC+TGG | + | chr1.1:79443598-79443617 | None:intergenic | 40.0% | |
| GGAATGTGCTTAATCTGAAG+CGG | - | chr1.1:79443527-79443546 | MS.gene76207:intron | 40.0% | |
| GGTCATGAATCTTTGTTCCA+AGG | - | chr1.1:79444036-79444055 | MS.gene76207:CDS | 40.0% | |
| GTCTCATCAATCCAAGCAAT+AGG | + | chr1.1:79443937-79443956 | None:intergenic | 40.0% | |
| GTTTGCAACAACCTATTGCT+TGG | - | chr1.1:79443923-79443942 | MS.gene76207:intron | 40.0% | |
| TAGAGTCCAGCGTTAAATAG+AGG | + | chr1.1:79446405-79446424 | None:intergenic | 40.0% | |
| TATGTACCATCTGCACTTCA+GGG | - | chr1.1:79446076-79446095 | MS.gene76207:CDS | 40.0% | |
| TCCTGATTGCAGAGATCATA+AGG | + | chr1.1:79444006-79444025 | None:intergenic | 40.0% | |
| TCGGAAGCAGCATAAATTTC+AGG | + | chr1.1:79443976-79443995 | None:intergenic | 40.0% | |
| TCTAAATGCATGCATGGCAT+TGG | - | chr1.1:79444549-79444568 | MS.gene76207:intron | 40.0% | |
| TCTGCATCTAAATGCATGCA+TGG | - | chr1.1:79444543-79444562 | MS.gene76207:intron | 40.0% | |
| TGAAGTGCAGATGGTACATA+TGG | + | chr1.1:79446076-79446095 | None:intergenic | 40.0% | |
| TGATAGACCATCAAACGTTC+TGG | + | chr1.1:79443754-79443773 | None:intergenic | 40.0% | |
| TGATGTAAAGAAAGCAGCTG+TGG | - | chr1.1:79443831-79443850 | MS.gene76207:intron | 40.0% | |
| TGCATGCATTTAGATGCAGA+TGG | + | chr1.1:79444543-79444562 | None:intergenic | 40.0% | |
| TTACCCCTTCTCAAGTACAT+CGG | - | chr1.1:79444374-79444393 | MS.gene76207:CDS | 40.0% | |
| TTGCGATGTTGACGAAAATG+GGG | - | chr1.1:79445057-79445076 | MS.gene76207:intron | 40.0% | |
| TTGCTTGGATTGATGAGACA+GGG | - | chr1.1:79443938-79443957 | MS.gene76207:CDS | 40.0% | |
| ! | AAACAGCAAGTATTGCCTCA+AGG | + | chr1.1:79446350-79446369 | None:intergenic | 40.0% |
| ! | AACATGGGAAATGGAAGTGT+TGG | - | chr1.1:79444222-79444241 | MS.gene76207:intron | 40.0% |
| ! | AGTAGGCACTGTAAGTTCTT+TGG | - | chr1.1:79445712-79445731 | MS.gene76207:CDS | 40.0% |
| ! | ATATTGGACGATCGTTGGTT+AGG | - | chr1.1:79443698-79443717 | MS.gene76207:intron | 40.0% |
| ! | ATTTATGCTGCTTCCGATGA+AGG | - | chr1.1:79443979-79443998 | MS.gene76207:CDS | 40.0% |
| ! | CCGTGTAATAATGGGGAATA+TGG | - | chr1.1:79445099-79445118 | MS.gene76207:intron | 40.0% |
| ! | CGTCTTTTGCCGTGTAATAA+TGG | - | chr1.1:79445090-79445109 | MS.gene76207:intron | 40.0% |
| ! | GATGGTTTCATCTTCTGGTT+GGG | - | chr1.1:79445464-79445483 | MS.gene76207:CDS | 40.0% |
| ! | GCAGCAAAAAGCGTAGAAAA+AGG | + | chr1.1:79446014-79446033 | None:intergenic | 40.0% |
| ! | TCTGAACGTGGCAAGATTTT+AGG | + | chr1.1:79445683-79445702 | None:intergenic | 40.0% |
| ! | TGGTCTATCAAAATGGTGGA+TGG | - | chr1.1:79443764-79443783 | MS.gene76207:CDS | 40.0% |
| ! | TTTATGCTGCTTCCGATGAA+GGG | - | chr1.1:79443980-79443999 | MS.gene76207:CDS | 40.0% |
| !! | AGGATGCTGTTGATTTGGTT+AGG | - | chr1.1:79443800-79443819 | MS.gene76207:CDS | 40.0% |
| !! | ATGATTCGGTTCACTCCATT+TGG | - | chr1.1:79445438-79445457 | MS.gene76207:CDS | 40.0% |
| !! | CTATCAAAATGGTGGATGGA+AGG | - | chr1.1:79443768-79443787 | MS.gene76207:CDS | 40.0% |
| !! | GTACTTAATGGGTTGATCAG+AGG | - | chr1.1:79445400-79445419 | MS.gene76207:intron | 40.0% |
| AAATGGCCATCATCTTGTGC+TGG | - | chr1.1:79443864-79443883 | MS.gene76207:intron | 45.0% | |
| AACATACCCTGAAGTGCAGA+TGG | + | chr1.1:79446085-79446104 | None:intergenic | 45.0% | |
| AAGCGTAGAAAAAGGCAACC+GGG | + | chr1.1:79446006-79446025 | None:intergenic | 45.0% | |
| AAGGTCTCTTCTGATGCTGA+AGG | - | chr1.1:79445268-79445287 | MS.gene76207:intron | 45.0% | |
| AATATGGAGCTTCTCCATCC+TGG | - | chr1.1:79445115-79445134 | MS.gene76207:intron | 45.0% | |
| ACCAAATCAACAGCATCCTG+TGG | + | chr1.1:79443799-79443818 | None:intergenic | 45.0% | |
| ACCTTGTGTTGAAGAAGACC+AGG | + | chr1.1:79446271-79446290 | None:intergenic | 45.0% | |
| AGTCCAGCGTTAAATAGAGG+GGG | + | chr1.1:79446402-79446421 | None:intergenic | 45.0% | |
| ATACCTCAGGGAATTCCAAC+TGG | - | chr1.1:79445957-79445976 | MS.gene76207:CDS | 45.0% | |
| ATTCAACCTGGCAAAAGGAC+AGG | + | chr1.1:79444595-79444614 | None:intergenic | 45.0% | |
| CATAAACAAGGTTCCTGCAG+AGG | - | chr1.1:79446037-79446056 | MS.gene76207:CDS | 45.0% | |
| CATAGTCACTACTACTGGGA+CGG | + | chr1.1:79445153-79445172 | None:intergenic | 45.0% | |
| GAGATCATAAGGCCCTTCAT+CGG | + | chr1.1:79443995-79444014 | None:intergenic | 45.0% | |
| GAGTCATATTGGACGATCGT+TGG | - | chr1.1:79443693-79443712 | MS.gene76207:intron | 45.0% | |
| GAGTCCAGCGTTAAATAGAG+GGG | + | chr1.1:79446403-79446422 | None:intergenic | 45.0% | |
| GCCTTATGATCTCTGCAATC+AGG | - | chr1.1:79444002-79444021 | MS.gene76207:CDS | 45.0% | |
| GCTGTGGAGGTAGAGTTAAA+TGG | - | chr1.1:79443847-79443866 | MS.gene76207:intron | 45.0% | |
| GGATGGATGGTTTCATCTTC+TGG | - | chr1.1:79445459-79445478 | MS.gene76207:CDS | 45.0% | |
| GGATGGTTTCATCTTCTGGT+TGG | - | chr1.1:79445463-79445482 | MS.gene76207:CDS | 45.0% | |
| GTTCACTCCATTTGGATGGA+TGG | - | chr1.1:79445446-79445465 | MS.gene76207:CDS | 45.0% | |
| TAACGCTGGACTCTAGTGAA+GGG | - | chr1.1:79446410-79446429 | MS.gene76207:CDS | 45.0% | |
| TCCACTCACATCCCAAAAGA+AGG | + | chr1.1:79445622-79445641 | None:intergenic | 45.0% | |
| TGAAGGGTTTATCTGCTGTG+TGG | - | chr1.1:79446426-79446445 | MS.gene76207:CDS | 45.0% | |
| TGCAATCAGGACAGCAGAAA+AGG | - | chr1.1:79444015-79444034 | MS.gene76207:CDS | 45.0% | |
| TGTAAAGAAAGCAGCTGTGG+AGG | - | chr1.1:79443834-79443853 | MS.gene76207:intron | 45.0% | |
| TTAACGCTGGACTCTAGTGA+AGG | - | chr1.1:79446409-79446428 | MS.gene76207:CDS | 45.0% | |
| TTCGGTTCACTCCATTTGGA+TGG | - | chr1.1:79445442-79445461 | MS.gene76207:CDS | 45.0% | |
| TTCTGCAAGGTCTTCTGCTA+CGG | - | chr1.1:79446315-79446334 | MS.gene76207:CDS | 45.0% | |
| TTTCCCCCTCTATTTAACGC+TGG | - | chr1.1:79446396-79446415 | MS.gene76207:CDS | 45.0% | |
| ! | ACCTGGTCTTCTTCAACACA+AGG | - | chr1.1:79446267-79446286 | MS.gene76207:CDS | 45.0% |
| ! | TCCACAGGATGCTGTTGATT+TGG | - | chr1.1:79443795-79443814 | MS.gene76207:CDS | 45.0% |
| ! | TGCACCGATGTACTTGAGAA+GGG | + | chr1.1:79444381-79444400 | None:intergenic | 45.0% |
| !! | TAGTGACTATGATAGTGGGG+TGG | - | chr1.1:79445162-79445181 | MS.gene76207:intron | 45.0% |
| !! | TTTGTGAGTGCCGTTCCTTT+TGG | - | chr1.1:79445547-79445566 | MS.gene76207:CDS | 45.0% |
| !!! | CACGAGTCATCTTTTTTGCC+TGG | + | chr1.1:79446189-79446208 | None:intergenic | 45.0% |
| !!! | GTGGCAAGATTTTAGGACCA+TGG | + | chr1.1:79445676-79445695 | None:intergenic | 45.0% |
| !! | ATATTATAATAAGAAAAAAA+TGG | + | chr1.1:79445371-79445390 | None:intergenic | 5.0% |
| !!! | TTTTTTTCTTATTATAATAT+TGG | - | chr1.1:79445371-79445390 | MS.gene76207:intron | 5.0% |
| ACTCTCGAAGACTCTGAACG+TGG | + | chr1.1:79445695-79445714 | None:intergenic | 50.0% | |
| AGCGTAGAAAAAGGCAACCG+GGG | + | chr1.1:79446005-79446024 | None:intergenic | 50.0% | |
| CGTTCAGAGTCTTCGAGAGT+AGG | - | chr1.1:79445695-79445714 | MS.gene76207:CDS | 50.0% | |
| CTCTTGCGAGCTACATTACC+TGG | - | chr1.1:79446250-79446269 | MS.gene76207:CDS | 50.0% | |
| GAACCAGTTGGAATTCCCTG+AGG | + | chr1.1:79445963-79445982 | None:intergenic | 50.0% | |
| GAGTAGGTGCATCCAAGTTG+GGG | - | chr1.1:79444100-79444119 | MS.gene76207:intron | 50.0% | |
| GGAGTAGGTGCATCCAAGTT+GGG | - | chr1.1:79444099-79444118 | MS.gene76207:intron | 50.0% | |
| GGGGTTAATTCAGCTAGCCA+TGG | - | chr1.1:79445656-79445675 | MS.gene76207:CDS | 50.0% | |
| TGGAAGCCCAGAACGTTTGA+TGG | - | chr1.1:79443744-79443763 | MS.gene76207:CDS | 50.0% | |
| TGGAGTAGGTGCATCCAAGT+TGG | - | chr1.1:79444098-79444117 | MS.gene76207:intron | 50.0% | |
| TGGATGGAAGGACTTTCCAC+AGG | - | chr1.1:79443780-79443799 | MS.gene76207:CDS | 50.0% | |
| ! | AGTAGGTGCATCCAAGTTGG+GGG | - | chr1.1:79444101-79444120 | MS.gene76207:intron | 50.0% |
| ! | CAAGTTGGGGGAGTGTATTG+GGG | - | chr1.1:79444113-79444132 | MS.gene76207:intron | 50.0% |
| ! | CCAAGTTGGGGGAGTGTATT+GGG | - | chr1.1:79444112-79444131 | MS.gene76207:intron | 50.0% |
| ! | CTGCACCGATGTACTTGAGA+AGG | + | chr1.1:79444382-79444401 | None:intergenic | 50.0% |
| ! | GCACCGATGTACTTGAGAAG+GGG | + | chr1.1:79444380-79444399 | None:intergenic | 50.0% |
| ! | TCCAAGTTGGGGGAGTGTAT+TGG | - | chr1.1:79444111-79444130 | MS.gene76207:intron | 50.0% |
| !! | ACAACGGAAAGGCGTCTAAC+AGG | - | chr1.1:79443506-79443525 | MS.gene76207:CDS | 50.0% |
| !! | GCTTGGCTTGCTTCTTCCAA+AGG | - | chr1.1:79444474-79444493 | MS.gene76207:intron | 50.0% |
| !!! | GCCTTCTTTTGGGATGTGAG+TGG | - | chr1.1:79445618-79445637 | MS.gene76207:CDS | 50.0% |
| CCCAATACACTCCCCCAACT+TGG | + | chr1.1:79444115-79444134 | None:intergenic | 55.0% | |
| CGTAGAAAAAGGCAACCGGG+GGG | + | chr1.1:79446003-79446022 | None:intergenic | 55.0% | |
| CTGAAGCTTCAACATCCCCC+CGG | - | chr1.1:79445985-79446004 | MS.gene76207:CDS | 55.0% | |
| GAAGCTTCAGGCGAACCAGT+TGG | + | chr1.1:79445975-79445994 | None:intergenic | 55.0% | |
| GCGTAGAAAAAGGCAACCGG+GGG | + | chr1.1:79446004-79446023 | None:intergenic | 55.0% | |
| GCTTTGCTGGATGTCCCTCT+CGG | - | chr1.1:79446115-79446134 | MS.gene76207:CDS | 55.0% | |
| GGTACTGTCTAGTGCCAGGA+TGG | + | chr1.1:79445132-79445151 | None:intergenic | 55.0% | |
| TACATCGGTGCAGTCGCGAT+TGG | - | chr1.1:79444389-79444408 | MS.gene76207:CDS | 55.0% | |
| ! | CTGCTACCTGTCCTTTTGCC+AGG | - | chr1.1:79444586-79444605 | MS.gene76207:intron | 55.0% |
| CGGGGGGATGTTGAAGCTTC+AGG | + | chr1.1:79445987-79446006 | None:intergenic | 60.0% | |
| GGACGGTACTGTCTAGTGCC+AGG | + | chr1.1:79445136-79445155 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 79443496 | 79446531 | 79443496 | ID=MS.gene76207 |
| chr1.1 | mRNA | 79443496 | 79446531 | 79443496 | ID=MS.gene76207.t1;Parent=MS.gene76207 |
| chr1.1 | exon | 79445420 | 79446531 | 79445420 | ID=MS.gene76207.t1.exon1;Parent=MS.gene76207.t1 |
| chr1.1 | CDS | 79445420 | 79446531 | 79445420 | ID=cds.MS.gene76207.t1;Parent=MS.gene76207.t1 |
| chr1.1 | exon | 79444738 | 79444979 | 79444738 | ID=MS.gene76207.t1.exon2;Parent=MS.gene76207.t1 |
| chr1.1 | CDS | 79444738 | 79444979 | 79444738 | ID=cds.MS.gene76207.t1;Parent=MS.gene76207.t1 |
| chr1.1 | exon | 79444306 | 79444409 | 79444306 | ID=MS.gene76207.t1.exon3;Parent=MS.gene76207.t1 |
| chr1.1 | CDS | 79444306 | 79444409 | 79444306 | ID=cds.MS.gene76207.t1;Parent=MS.gene76207.t1 |
| chr1.1 | exon | 79443930 | 79444061 | 79443930 | ID=MS.gene76207.t1.exon4;Parent=MS.gene76207.t1 |
| chr1.1 | CDS | 79443930 | 79444061 | 79443930 | ID=cds.MS.gene76207.t1;Parent=MS.gene76207.t1 |
| chr1.1 | exon | 79443739 | 79443837 | 79443739 | ID=MS.gene76207.t1.exon5;Parent=MS.gene76207.t1 |
| chr1.1 | CDS | 79443739 | 79443837 | 79443739 | ID=cds.MS.gene76207.t1;Parent=MS.gene76207.t1 |
| chr1.1 | exon | 79443496 | 79443537 | 79443496 | ID=MS.gene76207.t1.exon6;Parent=MS.gene76207.t1 |
| chr1.1 | CDS | 79443496 | 79443537 | 79443496 | ID=cds.MS.gene76207.t1;Parent=MS.gene76207.t1 |
| Gene Sequence |
| Protein sequence |
