Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069103.t1 | XP_003613057.1 | 95.3 | 572 | 27 | 0 | 1 | 572 | 1 | 572 | 0.00E+00 | 1097.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069103.t1 | Q8RY59 | 41.7 | 566 | 298 | 14 | 17 | 563 | 21 | 573 | 8.9e-107 | 389.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069103.t1 | G7JWF4 | 95.3 | 572 | 27 | 0 | 1 | 572 | 1 | 572 | 0.0e+00 | 1097.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056059 | MS.gene069103 | 0.809697 | 1.66E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene069103 | MS.gene029308 | PPI |
| MS.gene79552 | MS.gene069103 | PPI |
| MS.gene76207 | MS.gene069103 | PPI |
| MS.gene001066 | MS.gene069103 | PPI |
| MS.gene007901 | MS.gene069103 | PPI |
| MS.gene34237 | MS.gene069103 | PPI |
| MS.gene069103 | MS.gene001066 | PPI |
| MS.gene069103 | MS.gene046455 | PPI |
| MS.gene74956 | MS.gene069103 | PPI |
| MS.gene021778 | MS.gene069103 | PPI |
| MS.gene057563 | MS.gene069103 | PPI |
| MS.gene046455 | MS.gene069103 | PPI |
| MS.gene032270 | MS.gene069103 | PPI |
| MS.gene065039 | MS.gene069103 | PPI |
| MS.gene046444 | MS.gene069103 | PPI |
| MS.gene36039 | MS.gene069103 | PPI |
| MS.gene070678 | MS.gene069103 | PPI |
| MS.gene029308 | MS.gene069103 | PPI |
| MS.gene046409 | MS.gene069103 | PPI |
| MS.gene027783 | MS.gene069103 | PPI |
| MS.gene070621 | MS.gene069103 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069103.t1 | MTR_5g032190 | 95.280 | 572 | 27 | 0 | 1 | 572 | 1 | 572 | 0.0 | 1141 |
| MS.gene069103.t1 | MTR_5g032190 | 95.228 | 482 | 23 | 0 | 1 | 482 | 1 | 482 | 0.0 | 965 |
| MS.gene069103.t1 | MTR_5g032190 | 95.168 | 476 | 23 | 0 | 1 | 476 | 1 | 476 | 0.0 | 953 |
| MS.gene069103.t1 | MTR_1g112330 | 78.246 | 570 | 115 | 4 | 1 | 562 | 1 | 569 | 0.0 | 899 |
| MS.gene069103.t1 | MTR_1g112330 | 77.895 | 570 | 114 | 5 | 1 | 562 | 1 | 566 | 0.0 | 891 |
| MS.gene069103.t1 | MTR_1g112330 | 82.198 | 455 | 74 | 2 | 1 | 448 | 1 | 455 | 0.0 | 770 |
| MS.gene069103.t1 | MTR_7g011550 | 45.855 | 567 | 268 | 9 | 1 | 561 | 1 | 534 | 6.50e-156 | 457 |
| MS.gene069103.t1 | MTR_5g029580 | 44.308 | 325 | 167 | 5 | 234 | 553 | 27 | 342 | 1.96e-87 | 275 |
| MS.gene069103.t1 | MTR_3g077870 | 30.769 | 325 | 173 | 8 | 233 | 549 | 23 | 303 | 1.82e-38 | 144 |
| MS.gene069103.t1 | MTR_4g105740 | 31.000 | 300 | 161 | 8 | 266 | 560 | 46 | 304 | 2.39e-37 | 140 |
| MS.gene069103.t1 | MTR_4g105740 | 31.104 | 299 | 160 | 8 | 266 | 559 | 46 | 303 | 3.83e-37 | 140 |
| MS.gene069103.t1 | MTR_8g088250 | 28.136 | 295 | 160 | 6 | 270 | 553 | 26 | 279 | 2.79e-30 | 120 |
| MS.gene069103.t1 | MTR_2g090130 | 41.333 | 150 | 51 | 2 | 271 | 418 | 103 | 217 | 4.14e-29 | 115 |
| MS.gene069103.t1 | MTR_2g090130 | 57.377 | 61 | 26 | 0 | 101 | 161 | 43 | 103 | 3.16e-19 | 87.0 |
| MS.gene069103.t1 | MTR_7g011640 | 49.550 | 111 | 35 | 3 | 101 | 210 | 15 | 105 | 1.57e-22 | 94.4 |
| MS.gene069103.t1 | MTR_7g011880 | 35.032 | 157 | 73 | 4 | 376 | 531 | 58 | 186 | 4.33e-19 | 85.9 |
| MS.gene069103.t1 | MTR_7g061850 | 40.625 | 96 | 52 | 2 | 235 | 325 | 28 | 123 | 2.37e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069103.t1 | AT1G32230 | 41.667 | 564 | 294 | 13 | 17 | 560 | 21 | 569 | 5.05e-136 | 407 |
| MS.gene069103.t1 | AT1G32230 | 41.623 | 567 | 296 | 13 | 17 | 563 | 21 | 572 | 1.85e-135 | 407 |
| MS.gene069103.t1 | AT1G32230 | 41.623 | 567 | 296 | 13 | 17 | 563 | 21 | 572 | 1.85e-135 | 407 |
| MS.gene069103.t1 | AT1G32230 | 41.623 | 567 | 296 | 13 | 17 | 563 | 21 | 572 | 1.85e-135 | 407 |
| MS.gene069103.t1 | AT1G32230 | 41.623 | 567 | 296 | 13 | 17 | 563 | 21 | 572 | 1.85e-135 | 407 |
| MS.gene069103.t1 | AT1G32230 | 41.828 | 569 | 293 | 15 | 17 | 563 | 21 | 573 | 5.91e-135 | 405 |
| MS.gene069103.t1 | AT2G35510 | 39.619 | 578 | 320 | 11 | 1 | 560 | 1 | 567 | 4.33e-124 | 377 |
| MS.gene069103.t1 | AT2G35510 | 39.619 | 578 | 320 | 11 | 1 | 560 | 1 | 567 | 4.33e-124 | 377 |
| MS.gene069103.t1 | AT2G35510 | 40.959 | 459 | 252 | 8 | 1 | 448 | 1 | 451 | 1.80e-107 | 330 |
| MS.gene069103.t1 | AT1G70440 | 28.190 | 337 | 190 | 8 | 226 | 550 | 2 | 298 | 3.38e-38 | 143 |
| MS.gene069103.t1 | AT1G70440 | 28.190 | 337 | 190 | 8 | 226 | 550 | 2 | 298 | 3.38e-38 | 143 |
| MS.gene069103.t1 | AT1G23550 | 32.911 | 237 | 118 | 5 | 316 | 548 | 109 | 308 | 2.74e-36 | 138 |
| MS.gene069103.t1 | AT5G62520 | 29.249 | 253 | 131 | 5 | 301 | 549 | 89 | 297 | 3.52e-26 | 109 |
| MS.gene069103.t1 | AT3G47720 | 26.296 | 270 | 137 | 7 | 292 | 550 | 85 | 303 | 2.05e-22 | 98.6 |
| MS.gene069103.t1 | AT5G62520 | 32.877 | 146 | 89 | 3 | 301 | 442 | 89 | 229 | 1.08e-19 | 89.0 |
Find 124 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGTGATATTGACGAAAA+TGG | 0.188994 | 5.4:+22300579 | MS.gene069103:CDS |
| TCAGAATCAGCATAAATTTC+AGG | 0.192300 | 5.4:-22299502 | None:intergenic |
| TGTTTGACAACTTCGTTTCT+TGG | 0.207598 | 5.4:-22299157 | None:intergenic |
| CATTTAGAAATTGAAATAAA+TGG | 0.220833 | 5.4:+22299607 | MS.gene069103:CDS |
| ATATGCATTATCTGCAATTC+AGG | 0.249387 | 5.4:+22302185 | MS.gene069103:CDS |
| ATTTAATATCATTAGGATCT+TGG | 0.284189 | 5.4:-22299582 | None:intergenic |
| TTGAAACTAACAACATATTC+TGG | 0.302685 | 5.4:-22300771 | None:intergenic |
| TGATAGACCATCAAACGTTC+TGG | 0.315101 | 5.4:-22299280 | None:intergenic |
| TTCTCCACTATCCTGATTGC+AGG | 0.320979 | 5.4:-22299542 | None:intergenic |
| CAAGGTTTCTGCGAAGGATA+TGG | 0.322660 | 5.4:+22302153 | MS.gene069103:CDS |
| CCGTGTAATAATGGGGAATA+TGG | 0.323010 | 5.4:+22300623 | MS.gene069103:CDS |
| ACCATCTCGTGCGATCAAAA+TGG | 0.333689 | 5.4:+22302572 | MS.gene069103:CDS |
| AGAAAAGTACCTTGCTTTGA+AGG | 0.336075 | 5.4:-22302441 | None:intergenic |
| TGTATATGGAAGGTTGGATT+TGG | 0.339592 | 5.4:+22299804 | MS.gene069103:CDS |
| GTTGGTAGTGCAGTTGTATA+TGG | 0.343580 | 5.4:+22299790 | MS.gene069103:CDS |
| AAATGTAATTTAATATCATT+AGG | 0.344899 | 5.4:-22299589 | None:intergenic |
| ATCCAAGATACTATATAGTA+TGG | 0.349263 | 5.4:+22300721 | MS.gene069103:CDS |
| TGTACAGAAGATGTTTCTTA+AGG | 0.349580 | 5.4:+22299831 | MS.gene069103:CDS |
| ATTGTGATATTGACGAAAAT+GGG | 0.350719 | 5.4:+22300580 | MS.gene069103:CDS |
| CTGGTAATTACCAGGCAAAA+AGG | 0.353126 | 5.4:+22302341 | MS.gene069103:intron |
| TATCAGATGAATTTGAAATC+TGG | 0.365305 | 5.4:+22299430 | MS.gene069103:CDS |
| TTCCATACTATATAGTATCT+TGG | 0.367221 | 5.4:-22300723 | None:intergenic |
| AGAATATGTTGTTAGTTTCA+AGG | 0.376305 | 5.4:+22300773 | MS.gene069103:CDS |
| GCTTGGCTTGCTTCTTCTAA+AGG | 0.378498 | 5.4:+22299991 | MS.gene069103:CDS |
| CTTAAGGGAACTAGTAGTTT+TGG | 0.380222 | 5.4:+22299847 | MS.gene069103:CDS |
| GTACAGAAGATGTTTCTTAA+GGG | 0.381330 | 5.4:+22299832 | MS.gene069103:CDS |
| GTCTCGTCAATCCAAGCAAT+AGG | 0.384507 | 5.4:-22299463 | None:intergenic |
| CGTTTGATGGTCTATCAAAA+TGG | 0.393202 | 5.4:+22299286 | MS.gene069103:CDS |
| GTTTGCAGCGCCCTATTGCT+TGG | 0.403920 | 5.4:+22299452 | MS.gene069103:CDS |
| GACTCATATTGGACGGTCAT+TGG | 0.404817 | 5.4:+22299222 | MS.gene069103:CDS |
| GGAGTCGATGCTTCCAAGTT+GGG | 0.405561 | 5.4:+22299628 | MS.gene069103:CDS |
| AGAATGTTGTTGACTTGGTT+AGG | 0.415750 | 5.4:+22299329 | MS.gene069103:CDS |
| AGTAGCAATAACATGGGAAA+TGG | 0.417478 | 5.4:+22299730 | MS.gene069103:CDS |
| TTTGATCGCACGAGATGGTT+GGG | 0.419328 | 5.4:-22302568 | None:intergenic |
| TCCTGATTGCAGGGATCATA+AGG | 0.421377 | 5.4:-22299532 | None:intergenic |
| TCTAAATGCACACATGGCTT+TGG | 0.435149 | 5.4:+22300066 | MS.gene069103:CDS |
| TAGTCTTACTTCCTAAAAGA+AGG | 0.436907 | 5.4:-22301162 | None:intergenic |
| GCCTTATGATCCCTGCAATC+AGG | 0.440028 | 5.4:+22299531 | MS.gene069103:CDS |
| ACGAAATCAGAGACTCATAT+TGG | 0.440224 | 5.4:+22299211 | MS.gene069103:CDS |
| TGCGACCAGTGTTACCTCGC+TGG | 0.442121 | 5.4:+22299119 | MS.gene069103:CDS |
| TCCTCAGAATGTTGTTGACT+TGG | 0.450948 | 5.4:+22299324 | MS.gene069103:CDS |
| ACTATCATAGTCACCACTAC+TGG | 0.457911 | 5.4:-22300679 | None:intergenic |
| TCAGGATAGTGGAGAAAGTC+AGG | 0.458623 | 5.4:+22299549 | MS.gene069103:CDS |
| TGCAGTTGTATATGGAAGGT+TGG | 0.460207 | 5.4:+22299798 | MS.gene069103:CDS |
| AGTAGTGGTGACTATGATAG+TGG | 0.460572 | 5.4:+22300681 | MS.gene069103:CDS |
| CTCTTGAGAGCTACAATAGT+TGG | 0.472193 | 5.4:+22302418 | MS.gene069103:CDS |
| AGCACAGGAAAAGGCATTGA+AGG | 0.473023 | 5.4:-22302112 | None:intergenic |
| CAACGGAAAGGCATCGGATA+GGG | 0.473840 | 5.4:+22299036 | MS.gene069103:CDS |
| CAGAATCAGCATAAATTTCA+GGG | 0.479346 | 5.4:-22299501 | None:intergenic |
| AGTATGCTTAACTATAACAT+TGG | 0.483021 | 5.4:-22299668 | None:intergenic |
| TCTCGTCAATCCAAGCAATA+GGG | 0.485939 | 5.4:-22299462 | None:intergenic |
| ATGCTAATGTTCGATATGCT+TGG | 0.490597 | 5.4:+22299974 | MS.gene069103:CDS |
| AAGGTCTCTTCTGCTGCTGA+AGG | 0.492093 | 5.4:+22300792 | MS.gene069103:CDS |
| ATTGCTTGGATTGACGAGAC+AGG | 0.495738 | 5.4:+22299466 | MS.gene069103:CDS |
| TAGAAATTAAACCTGGCAAA+AGG | 0.497397 | 5.4:-22300114 | None:intergenic |
| GATAGACCATCAAACGTTCT+GGG | 0.497415 | 5.4:-22299279 | None:intergenic |
| TGGACGCCCAGAACGTTTGA+TGG | 0.500372 | 5.4:+22299273 | MS.gene069103:CDS |
| ATACCTCAGGGAATAGCATC+TGG | 0.501440 | 5.4:+22302067 | MS.gene069103:intron |
| GCATCAATAAGCACAGGAAA+AGG | 0.503405 | 5.4:-22302121 | None:intergenic |
| TGGAGTCGATGCTTCCAAGT+TGG | 0.503473 | 5.4:+22299627 | MS.gene069103:CDS |
| ACTATGATGAAGTGTGGGCT+TGG | 0.505685 | 5.4:+22300024 | MS.gene069103:CDS |
| TACAGTGATGCAATCACGAT+TGG | 0.505775 | 5.4:+22299906 | MS.gene069103:CDS |
| GATCCCTGCAATCAGGATAG+TGG | 0.509927 | 5.4:+22299538 | MS.gene069103:CDS |
| AATATGGAGCTTCTCCGTCC+TGG | 0.513713 | 5.4:+22300639 | MS.gene069103:CDS |
| AAAGGCATTGAAGGGGATGT+TGG | 0.517939 | 5.4:-22302103 | None:intergenic |
| GCGACCAGTGTTACCTCGCT+GGG | 0.532218 | 5.4:+22299120 | MS.gene069103:CDS |
| GGCAAACAACGGAAAGGCAT+CGG | 0.532519 | 5.4:+22299030 | MS.gene069103:CDS |
| CTATCATAGTCACCACTACT+GGG | 0.534346 | 5.4:-22300678 | None:intergenic |
| CTATCAAAATGGTGAATGGA+AGG | 0.536490 | 5.4:+22299297 | MS.gene069103:CDS |
| CTATATAGTATCTTGGATTG+TGG | 0.536691 | 5.4:-22300716 | None:intergenic |
| TGCATCACTGTACTTGAGAA+GGG | 0.539798 | 5.4:-22299895 | None:intergenic |
| TATATGAATTATAAGAAGAG+TGG | 0.542935 | 5.4:+22299253 | MS.gene069103:CDS |
| ATATGAGTCTCTGATTTCGT+CGG | 0.544734 | 5.4:-22299208 | None:intergenic |
| CAACATATTCTGGACAGATG+TGG | 0.545442 | 5.4:-22300761 | None:intergenic |
| ACTGGTCGCAGATCTCCGTT+TGG | 0.546119 | 5.4:-22299106 | None:intergenic |
| ACAACGGAAAGGCATCGGAT+AGG | 0.546402 | 5.4:+22299035 | MS.gene069103:CDS |
| TGGTCTATCAAAATGGTGAA+TGG | 0.549899 | 5.4:+22299293 | MS.gene069103:CDS |
| AACATATTCTGGACAGATGT+GGG | 0.551162 | 5.4:-22300760 | None:intergenic |
| GGACGAAACTGTCTAGTGCC+AGG | 0.552779 | 5.4:-22300657 | None:intergenic |
| CCACATGCTACATGTCCAAA+CGG | 0.553167 | 5.4:+22299091 | MS.gene069103:CDS |
| AACATGGGAAATGGAAATGT+TGG | 0.556039 | 5.4:+22299739 | MS.gene069103:CDS |
| TATCTACTATGATGAAGTGT+GGG | 0.563052 | 5.4:+22300019 | MS.gene069103:CDS |
| GCACAGGAAAAGGCATTGAA+GGG | 0.565819 | 5.4:-22302111 | None:intergenic |
| ATTAAACCTGGCAAAAGGAA+AGG | 0.568389 | 5.4:-22300109 | None:intergenic |
| AATAGTTGGCCTTCAAAGCA+AGG | 0.570840 | 5.4:+22302432 | MS.gene069103:CDS |
| CTGAGAGCATCAATAAGCAC+AGG | 0.571313 | 5.4:-22302127 | None:intergenic |
| TATTGATGCTCTCAGAAACA+AGG | 0.572331 | 5.4:+22302135 | MS.gene069103:CDS |
| TGAAGATAGTAGCAATAACA+TGG | 0.572879 | 5.4:+22299723 | MS.gene069103:CDS |
| CAGAAACAAGGTTTCTGCGA+AGG | 0.572993 | 5.4:+22302147 | MS.gene069103:CDS |
| GTAGTGCAGTTGTATATGGA+AGG | 0.578361 | 5.4:+22299794 | MS.gene069103:CDS |
| ACCAAGTCAACAACATTCTG+AGG | 0.581281 | 5.4:-22299325 | None:intergenic |
| TTGCTTGGATTGACGAGACA+GGG | 0.581940 | 5.4:+22299467 | MS.gene069103:CDS |
| GAGTCGATGCTTCCAAGTTG+GGG | 0.583392 | 5.4:+22299629 | MS.gene069103:CDS |
| TTGCATCACTGTACTTGAGA+AGG | 0.584101 | 5.4:-22299896 | None:intergenic |
| AAGTGTGGGCTTGGTCATTG+TGG | 0.585698 | 5.4:+22300033 | MS.gene069103:CDS |
| ATCGCACGAGATGGTTGGGA+GGG | 0.586183 | 5.4:-22302564 | None:intergenic |
| CCATATTCCCCATTATTACA+CGG | 0.586757 | 5.4:-22300623 | None:intergenic |
| TCTCCACTATCCTGATTGCA+GGG | 0.589306 | 5.4:-22299541 | None:intergenic |
| TATGCATTATCTGCAATTCA+GGG | 0.603277 | 5.4:+22302186 | MS.gene069103:CDS |
| GATGCCCAGCGAGGTAACAC+TGG | 0.607233 | 5.4:-22299124 | None:intergenic |
| AGACAGTTTCGTCCCAGTAG+TGG | 0.612844 | 5.4:+22300666 | MS.gene069103:CDS |
| ATAGCATCTGGTTCGCGTAG+AGG | 0.613583 | 5.4:+22302079 | MS.gene069103:CDS |
| GTAGTGGTGACTATGATAGT+GGG | 0.614725 | 5.4:+22300682 | MS.gene069103:CDS |
| TCTACATCTAAATGCACACA+TGG | 0.616416 | 5.4:+22300060 | MS.gene069103:CDS |
| GATCGCACGAGATGGTTGGG+AGG | 0.621606 | 5.4:-22302565 | None:intergenic |
| CCGTTTGGACATGTAGCATG+TGG | 0.622892 | 5.4:-22299091 | None:intergenic |
| TCATCTCCCAATACTTAACA+AGG | 0.623898 | 5.4:-22302597 | None:intergenic |
| GGGTTGTGCTTAATCTGAAG+CGG | 0.628518 | 5.4:+22299056 | MS.gene069103:CDS |
| GAAACTGTCTAGTGCCAGGA+CGG | 0.638018 | 5.4:-22300653 | None:intergenic |
| TTGTGATATTGACGAAAATG+GGG | 0.640860 | 5.4:+22300581 | MS.gene069103:CDS |
| GCATCACTGTACTTGAGAAG+GGG | 0.643866 | 5.4:-22299894 | None:intergenic |
| CTATCTACTATGATGAAGTG+TGG | 0.646279 | 5.4:+22300018 | MS.gene069103:CDS |
| AATCAGAGACTCATATTGGA+CGG | 0.648143 | 5.4:+22299215 | MS.gene069103:CDS |
| GAAGATAGTAGCAATAACAT+GGG | 0.651958 | 5.4:+22299724 | MS.gene069103:CDS |
| CATGGAGGCAAACAACGGAA+AGG | 0.657589 | 5.4:+22299024 | None:intergenic |
| CACAGGAAAAGGCATTGAAG+GGG | 0.658134 | 5.4:-22302110 | None:intergenic |
| ACTGTGGAGGTAGAGTTACA+TGG | 0.660219 | 5.4:+22299376 | MS.gene069103:CDS |
| TGCGAAGAAAGCAACTGTGG+AGG | 0.668909 | 5.4:+22299363 | MS.gene069103:CDS |
| AGTCGATGCTTCCAAGTTGG+GGG | 0.670164 | 5.4:+22299630 | MS.gene069103:CDS |
| TAATGCGAAGAAAGCAACTG+TGG | 0.675973 | 5.4:+22299360 | MS.gene069103:CDS |
| ATAAACATGGAGGCAAACAA+CGG | 0.683583 | 5.4:+22299019 | None:intergenic |
| TGGTGACTATGATAGTGGGG+TGG | 0.700703 | 5.4:+22300686 | MS.gene069103:CDS |
| TAGTGGTGACTATGATAGTG+GGG | 0.714306 | 5.4:+22300683 | MS.gene069103:CDS |
| GATACAAGTGATGCCCAGCG+AGG | 0.747737 | 5.4:-22299133 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGTAATTTAATATCATT+AGG | - | chr5.4:22299592-22299611 | None:intergenic | 10.0% |
| !! | AACTTAATATATATGAAAAA+AGG | - | chr5.4:22301356-22301375 | None:intergenic | 10.0% |
| !! | AGGAAAAAAATTATTTAGAT+GGG | + | chr5.4:22301606-22301625 | MS.gene069103:intron | 15.0% |
| !! | CATTTAGAAATTGAAATAAA+TGG | + | chr5.4:22299607-22299626 | MS.gene069103:CDS | 15.0% |
| !! | TTTACACAAGTATTTATTTA+AGG | + | chr5.4:22300228-22300247 | MS.gene069103:intron | 15.0% |
| !!! | AAGACTAAGAATAATATTTT+TGG | + | chr5.4:22301178-22301197 | MS.gene069103:CDS | 15.0% |
| !!! | AGACTAAGAATAATATTTTT+GGG | + | chr5.4:22301179-22301198 | MS.gene069103:CDS | 15.0% |
| !!! | ATTTTAATAAAATTCTGAGA+AGG | + | chr5.4:22301790-22301809 | MS.gene069103:intron | 15.0% |
| !!! | GGAATTGATAATTTAATAAA+AGG | + | chr5.4:22301482-22301501 | MS.gene069103:intron | 15.0% |
| !!! | TATATTTTTATTTTGCTCAA+CGG | - | chr5.4:22299770-22299789 | None:intergenic | 15.0% |
| !!! | TTTTTATTATTCTGTTGTAA+TGG | + | chr5.4:22300516-22300535 | MS.gene069103:intron | 15.0% |
| !! | AAGACATTGATGTATAAATA+TGG | - | chr5.4:22300448-22300467 | None:intergenic | 20.0% |
| !! | ACCAATATTATAAACGAAAA+TGG | - | chr5.4:22300891-22300910 | None:intergenic | 20.0% |
| !! | AGAAGACATAAAAGAAATAA+AGG | - | chr5.4:22300830-22300849 | None:intergenic | 20.0% |
| !! | AGACATTGATGTATAAATAT+GGG | - | chr5.4:22300447-22300466 | None:intergenic | 20.0% |
| !! | ATATAAAAGATGAAACACAT+TGG | - | chr5.4:22301422-22301441 | None:intergenic | 20.0% |
| !! | ATTTAATATCATTAGGATCT+TGG | - | chr5.4:22299585-22299604 | None:intergenic | 20.0% |
| !! | GAGCAAAATAAAAATATAGT+TGG | + | chr5.4:22299772-22299791 | MS.gene069103:CDS | 20.0% |
| !! | GAGGAAAAAAATTATTTAGA+TGG | + | chr5.4:22301605-22301624 | MS.gene069103:intron | 20.0% |
| !! | TATATATGAAAAAAGGAAAG+TGG | - | chr5.4:22301349-22301368 | None:intergenic | 20.0% |
| !! | TATATGAATTATAAGAAGAG+TGG | + | chr5.4:22299253-22299272 | MS.gene069103:CDS | 20.0% |
| !! | TATTATAAACGAAAATGGAA+AGG | - | chr5.4:22300886-22300905 | None:intergenic | 20.0% |
| !!! | AAAGGATCTTATTTTTTGTT+AGG | - | chr5.4:22300868-22300887 | None:intergenic | 20.0% |
| !!! | AATTCAATAGTTTTTTCCTT+TGG | + | chr5.4:22300203-22300222 | MS.gene069103:intron | 20.0% |
| !!! | AGTATTATAGAACATTTTCA+AGG | - | chr5.4:22300337-22300356 | None:intergenic | 20.0% |
| !!! | GACTAAGAATAATATTTTTG+GGG | + | chr5.4:22301180-22301199 | MS.gene069103:CDS | 20.0% |
| !!! | GATATATAATGCATTTTTAC+AGG | + | chr5.4:22301139-22301158 | MS.gene069103:intron | 20.0% |
| !!! | TAACTTGTTGATATATGATT+CGG | + | chr5.4:22300933-22300952 | MS.gene069103:intron | 20.0% |
| !!! | TATAAATTGTCATTGTTTTC+TGG | + | chr5.4:22302322-22302341 | MS.gene069103:intron | 20.0% |
| !!! | TCCATTTTCGTTTATAATAT+TGG | + | chr5.4:22300887-22300906 | MS.gene069103:intron | 20.0% |
| ! | AAAAATTATTTAGATGGGAC+AGG | + | chr5.4:22301611-22301630 | MS.gene069103:intron | 25.0% |
| ! | AAATTACGAAAAATTGTCGT+GGG | + | chr5.4:22299950-22299969 | MS.gene069103:CDS | 25.0% |
| ! | AAGAAACCGTTTAAACAATT+AGG | - | chr5.4:22302537-22302556 | None:intergenic | 25.0% |
| ! | AATACTTGTGTAAAAACCAA+AGG | - | chr5.4:22300222-22300241 | None:intergenic | 25.0% |
| ! | ACAATTGACAATAATAGAAG+TGG | - | chr5.4:22300301-22300320 | None:intergenic | 25.0% |
| ! | AGTATGCTTAACTATAACAT+TGG | - | chr5.4:22299671-22299690 | None:intergenic | 25.0% |
| ! | ATACCTCCTAATTGTTTAAA+CGG | + | chr5.4:22302528-22302547 | MS.gene069103:intron | 25.0% |
| ! | ATCCAAGATACTATATAGTA+TGG | + | chr5.4:22300721-22300740 | MS.gene069103:CDS | 25.0% |
| ! | ATGTATAAATATGGGGAAAA+AGG | - | chr5.4:22300439-22300458 | None:intergenic | 25.0% |
| ! | ATTGTGATATTGACGAAAAT+GGG | + | chr5.4:22300580-22300599 | MS.gene069103:CDS | 25.0% |
| ! | CACAAGTATTTATTTAAGGA+TGG | + | chr5.4:22300232-22300251 | MS.gene069103:intron | 25.0% |
| ! | GACATTGATGTATAAATATG+GGG | - | chr5.4:22300446-22300465 | None:intergenic | 25.0% |
| ! | TGATGATTAGAAATTAAACC+TGG | - | chr5.4:22300124-22300143 | None:intergenic | 25.0% |
| ! | TTATCAATTCCTCTATATTC+TGG | - | chr5.4:22301473-22301492 | None:intergenic | 25.0% |
| ! | TTCCATACTATATAGTATCT+TGG | - | chr5.4:22300726-22300745 | None:intergenic | 25.0% |
| ! | TTGAAACTAACAACATATTC+TGG | - | chr5.4:22300774-22300793 | None:intergenic | 25.0% |
| !! | AGAATATGTTGTTAGTTTCA+AGG | + | chr5.4:22300773-22300792 | MS.gene069103:CDS | 25.0% |
| !! | CGAATCAATTTTTGAATTCT+GGG | + | chr5.4:22302044-22302063 | MS.gene069103:intron | 25.0% |
| !! | TATAAGTTGTCATTGTTTTC+TGG | + | chr5.4:22302268-22302287 | MS.gene069103:intron | 25.0% |
| !! | TATCAGATGAATTTGAAATC+TGG | + | chr5.4:22299430-22299449 | MS.gene069103:CDS | 25.0% |
| !! | TCGAATCAATTTTTGAATTC+TGG | + | chr5.4:22302043-22302062 | MS.gene069103:intron | 25.0% |
| !! | TTTAAACAATTAGGAGGTAT+AGG | - | chr5.4:22302528-22302547 | None:intergenic | 25.0% |
| !! | TTTTACTATCTAAGCAATCT+AGG | + | chr5.4:22301864-22301883 | MS.gene069103:intron | 25.0% |
| !!! | AAATGCATTGCTTTTTACAA+AGG | - | chr5.4:22301312-22301331 | None:intergenic | 25.0% |
| !!! | GATAAAAAAGTATCAGTTCA+CGG | + | chr5.4:22301896-22301915 | MS.gene069103:intron | 25.0% |
| !!! | TGCTTTTTACAAAGGAAATT+TGG | - | chr5.4:22301304-22301323 | None:intergenic | 25.0% |
| AAAAATTCAGCACAAGATGA+TGG | - | chr5.4:22299402-22299421 | None:intergenic | 30.0% | |
| AAACAAGTTTCCAAAAGGAA+GGG | - | chr5.4:22301105-22301124 | None:intergenic | 30.0% | |
| AAACCGTTTAAACAATTAGG+AGG | - | chr5.4:22302534-22302553 | None:intergenic | 30.0% | |
| AAGTGATCTGTCAAATATGA+AGG | - | chr5.4:22301029-22301048 | None:intergenic | 30.0% | |
| AATTACGAAAAATTGTCGTG+GGG | + | chr5.4:22299951-22299970 | MS.gene069103:CDS | 30.0% | |
| ATATGCATTATCTGCAATTC+AGG | + | chr5.4:22302185-22302204 | MS.gene069103:CDS | 30.0% | |
| CAGAATCAGCATAAATTTCA+GGG | - | chr5.4:22299504-22299523 | None:intergenic | 30.0% | |
| CATTGTGATATTGACGAAAA+TGG | + | chr5.4:22300579-22300598 | MS.gene069103:CDS | 30.0% | |
| CTATATAGTATCTTGGATTG+TGG | - | chr5.4:22300719-22300738 | None:intergenic | 30.0% | |
| GAAAGAAACAAGTTTCCAAA+AGG | - | chr5.4:22301110-22301129 | None:intergenic | 30.0% | |
| GAAATTACGAAAAATTGTCG+TGG | + | chr5.4:22299949-22299968 | MS.gene069103:CDS | 30.0% | |
| GAAGATAGTAGCAATAACAT+GGG | + | chr5.4:22299724-22299743 | MS.gene069103:CDS | 30.0% | |
| GATATCAATTAAGACAGAGA+CGG | - | chr5.4:22302243-22302262 | None:intergenic | 30.0% | |
| GGATAAATTCCAGAATATAG+AGG | + | chr5.4:22301461-22301480 | MS.gene069103:intron | 30.0% | |
| GTACAGAAGATGTTTCTTAA+GGG | + | chr5.4:22299832-22299851 | MS.gene069103:CDS | 30.0% | |
| TAGAAATTAAACCTGGCAAA+AGG | - | chr5.4:22300117-22300136 | None:intergenic | 30.0% | |
| TAGATATGCAGGCATAATTA+GGG | + | chr5.4:22301577-22301596 | MS.gene069103:intron | 30.0% | |
| TATAGATTTCTGACTCATCA+TGG | + | chr5.4:22301819-22301838 | MS.gene069103:intron | 30.0% | |
| TATCTACTATGATGAAGTGT+GGG | + | chr5.4:22300019-22300038 | MS.gene069103:CDS | 30.0% | |
| TATGCATTATCTGCAATTCA+GGG | + | chr5.4:22302186-22302205 | MS.gene069103:CDS | 30.0% | |
| TCAGAATCAGCATAAATTTC+AGG | - | chr5.4:22299505-22299524 | None:intergenic | 30.0% | |
| TCTACTAATATATCTCTGCA+TGG | + | chr5.4:22300258-22300277 | MS.gene069103:intron | 30.0% | |
| TGAAGATAGTAGCAATAACA+TGG | + | chr5.4:22299723-22299742 | MS.gene069103:CDS | 30.0% | |
| TGTACAGAAGATGTTTCTTA+AGG | + | chr5.4:22299831-22299850 | MS.gene069103:CDS | 30.0% | |
| TTACAAAGGAAATTTGGCAT+CGG | - | chr5.4:22301298-22301317 | None:intergenic | 30.0% | |
| TTGTGATATTGACGAAAATG+GGG | + | chr5.4:22300581-22300600 | MS.gene069103:CDS | 30.0% | |
| ! | ATTTTTACAGGCCTTCTTTT+AGG | + | chr5.4:22301151-22301170 | MS.gene069103:intron | 30.0% |
| ! | CATTGGCTATCTTAATATCA+AGG | - | chr5.4:22301405-22301424 | None:intergenic | 30.0% |
| ! | TAGTCTTACTTCCTAAAAGA+AGG | - | chr5.4:22301165-22301184 | None:intergenic | 30.0% |
| ! | TCTGTTGTAATGGAAAGAAA+GGG | + | chr5.4:22300526-22300545 | MS.gene069103:intron | 30.0% |
| ! | TTCTGTTGTAATGGAAAGAA+AGG | + | chr5.4:22300525-22300544 | MS.gene069103:intron | 30.0% |
| !! | ATTGTTTTCTGGTAATTACC+AGG | + | chr5.4:22302279-22302298 | MS.gene069103:intron | 30.0% |
| !!! | AAGGCTTTAACTTTTTTGCA+TGG | + | chr5.4:22302466-22302485 | MS.gene069103:intron | 30.0% |
| !!! | AGGCTTTAACTTTTTTGCAT+GGG | + | chr5.4:22302467-22302486 | MS.gene069103:intron | 30.0% |
| AACATATTCTGGACAGATGT+GGG | - | chr5.4:22300763-22300782 | None:intergenic | 35.0% | |
| AACATGGGAAATGGAAATGT+TGG | + | chr5.4:22299739-22299758 | MS.gene069103:CDS | 35.0% | |
| AAGGAGAAATCAACATGCTA+GGG | - | chr5.4:22300987-22301006 | None:intergenic | 35.0% | |
| AATCAGAGACTCATATTGGA+CGG | + | chr5.4:22299215-22299234 | MS.gene069103:CDS | 35.0% | |
| ACGAAATCAGAGACTCATAT+TGG | + | chr5.4:22299211-22299230 | MS.gene069103:CDS | 35.0% | |
| AGTAGCAATAACATGGGAAA+TGG | + | chr5.4:22299730-22299749 | MS.gene069103:CDS | 35.0% | |
| ATAAGTAGCAAGTCTTCAGA+AGG | + | chr5.4:22301440-22301459 | MS.gene069103:intron | 35.0% | |
| ATATGAGTCTCTGATTTCGT+CGG | - | chr5.4:22299211-22299230 | None:intergenic | 35.0% | |
| ATGCTAATGTTCGATATGCT+TGG | + | chr5.4:22299974-22299993 | MS.gene069103:CDS | 35.0% | |
| ATTAAACCTGGCAAAAGGAA+AGG | - | chr5.4:22300112-22300131 | None:intergenic | 35.0% | |
| CCATATTCCCCATTATTACA+CGG | - | chr5.4:22300626-22300645 | None:intergenic | 35.0% | |
| CTAGATATGCAGGCATAATT+AGG | + | chr5.4:22301576-22301595 | MS.gene069103:intron | 35.0% | |
| CTATCAAAATGGTGAATGGA+AGG | + | chr5.4:22299297-22299316 | MS.gene069103:CDS | 35.0% | |
| CTATCTACTATGATGAAGTG+TGG | + | chr5.4:22300018-22300037 | MS.gene069103:CDS | 35.0% | |
| GAAACAAGTTTCCAAAAGGA+AGG | - | chr5.4:22301106-22301125 | None:intergenic | 35.0% | |
| GTACTTGATGAGTTAATCAG+AGG | + | chr5.4:22300909-22300928 | MS.gene069103:intron | 35.0% | |
| TAAGCAATCTAGGTTTCAGT+CGG | + | chr5.4:22301874-22301893 | MS.gene069103:intron | 35.0% | |
| TATTGATGCTCTCAGAAACA+AGG | + | chr5.4:22302135-22302154 | MS.gene069103:CDS | 35.0% | |
| TCTACATCTAAATGCACACA+TGG | + | chr5.4:22300060-22300079 | MS.gene069103:CDS | 35.0% | |
| TGAATGGTTTATCTGCTACA+TGG | + | chr5.4:22302497-22302516 | MS.gene069103:intron | 35.0% | |
| TGGTCTATCAAAATGGTGAA+TGG | + | chr5.4:22299293-22299312 | MS.gene069103:CDS | 35.0% | |
| TGTATATGGAAGGTTGGATT+TGG | + | chr5.4:22299804-22299823 | MS.gene069103:CDS | 35.0% | |
| TGTTTGACAACTTCGTTTCT+TGG | - | chr5.4:22299160-22299179 | None:intergenic | 35.0% | |
| ! | ATGATTTTGCGAAGAAGTTG+AGG | + | chr5.4:22302374-22302393 | MS.gene069103:CDS | 35.0% |
| ! | CAAGTGACTGCATTGATAAA+AGG | + | chr5.4:22301650-22301669 | MS.gene069103:intron | 35.0% |
| ! | CGTTTGATGGTCTATCAAAA+TGG | + | chr5.4:22299286-22299305 | MS.gene069103:CDS | 35.0% |
| ! | CTTAAGGGAACTAGTAGTTT+TGG | + | chr5.4:22299847-22299866 | MS.gene069103:CDS | 35.0% |
| ! | CTTTTATCAATGCAGTCACT+TGG | - | chr5.4:22301652-22301671 | None:intergenic | 35.0% |
| ! | GAAAGAAAGGGATTCAAGTT+TGG | + | chr5.4:22300538-22300557 | MS.gene069103:intron | 35.0% |
| ! | GACTGCATTGATAAAAGGAA+TGG | + | chr5.4:22301655-22301674 | MS.gene069103:intron | 35.0% |
| ! | GTCTTTTGCCGTGTAATAAT+GGG | + | chr5.4:22300615-22300634 | MS.gene069103:CDS | 35.0% |
| ! | TCTGAACGTGACAAGATTTT+AGG | - | chr5.4:22301226-22301245 | None:intergenic | 35.0% |
| ! | TCTTTTGCCGTGTAATAATG+GGG | + | chr5.4:22300616-22300635 | MS.gene069103:CDS | 35.0% |
| ! | TGCATTGATAAAAGGAATGG+TGG | + | chr5.4:22301658-22301677 | MS.gene069103:intron | 35.0% |
| ! | TGTCTTTTGCCGTGTAATAA+TGG | + | chr5.4:22300614-22300633 | MS.gene069103:CDS | 35.0% |
| !! | AAGCAAGGTACTTTTCTCAA+AGG | + | chr5.4:22302447-22302466 | MS.gene069103:intron | 35.0% |
| !! | AGAAAAGTACCTTGCTTTGA+AGG | - | chr5.4:22302444-22302463 | None:intergenic | 35.0% |
| !! | AGAATGTTGTTGACTTGGTT+AGG | + | chr5.4:22299329-22299348 | MS.gene069103:CDS | 35.0% |
| !! | ATGATTCGGTTCATTCCATT+TGG | + | chr5.4:22300947-22300966 | MS.gene069103:intron | 35.0% |
| !! | CAGATAAGTTCTAGATATGC+AGG | + | chr5.4:22301566-22301585 | MS.gene069103:intron | 35.0% |
| !! | TAGTGTAAAACTAGCTTTGC+TGG | + | chr5.4:22302213-22302232 | MS.gene069103:intron | 35.0% |
| !!! | GTGACAAGATTTTAGGACTT+CGG | - | chr5.4:22301219-22301238 | None:intergenic | 35.0% |
| ACCAAGTCAACAACATTCTG+AGG | - | chr5.4:22299328-22299347 | None:intergenic | 40.0% | |
| ACTATCATAGTCACCACTAC+TGG | - | chr5.4:22300682-22300701 | None:intergenic | 40.0% | |
| AGTAGTGGTGACTATGATAG+TGG | + | chr5.4:22300681-22300700 | MS.gene069103:CDS | 40.0% | |
| CAACATATTCTGGACAGATG+TGG | - | chr5.4:22300764-22300783 | None:intergenic | 40.0% | |
| CTATCATAGTCACCACTACT+GGG | - | chr5.4:22300681-22300700 | None:intergenic | 40.0% | |
| CTCTTGAGAGCTACAATAGT+TGG | + | chr5.4:22302418-22302437 | MS.gene069103:CDS | 40.0% | |
| CTGGTAATTACCAGGCAAAA+AGG | + | chr5.4:22302287-22302306 | MS.gene069103:intron | 40.0% | |
| GAAGGAGAAATCAACATGCT+AGG | - | chr5.4:22300988-22301007 | None:intergenic | 40.0% | |
| GATAGACCATCAAACGTTCT+GGG | - | chr5.4:22299282-22299301 | None:intergenic | 40.0% | |
| GCATCAATAAGCACAGGAAA+AGG | - | chr5.4:22302124-22302143 | None:intergenic | 40.0% | |
| GTAGCAGATAAACCATTCAC+TGG | - | chr5.4:22302496-22302515 | None:intergenic | 40.0% | |
| GTAGTGCAGTTGTATATGGA+AGG | + | chr5.4:22299794-22299813 | MS.gene069103:CDS | 40.0% | |
| GTAGTGGTGACTATGATAGT+GGG | + | chr5.4:22300682-22300701 | MS.gene069103:CDS | 40.0% | |
| GTTCATTCCATTTGGATGGA+GGG | + | chr5.4:22300955-22300974 | MS.gene069103:intron | 40.0% | |
| TAATGCGAAGAAAGCAACTG+TGG | + | chr5.4:22299360-22299379 | MS.gene069103:CDS | 40.0% | |
| TACAGTGATGCAATCACGAT+TGG | + | chr5.4:22299906-22299925 | MS.gene069103:CDS | 40.0% | |
| TCTAAATGCACACATGGCTT+TGG | + | chr5.4:22300066-22300085 | MS.gene069103:CDS | 40.0% | |
| TCTCGTCAATCCAAGCAATA+GGG | - | chr5.4:22299465-22299484 | None:intergenic | 40.0% | |
| TGATAGACCATCAAACGTTC+TGG | - | chr5.4:22299283-22299302 | None:intergenic | 40.0% | |
| TGCAGTTGTATATGGAAGGT+TGG | + | chr5.4:22299798-22299817 | MS.gene069103:CDS | 40.0% | |
| TGCATCACTGTACTTGAGAA+GGG | - | chr5.4:22299898-22299917 | None:intergenic | 40.0% | |
| TTCGGTTCATTCCATTTGGA+TGG | + | chr5.4:22300951-22300970 | MS.gene069103:intron | 40.0% | |
| TTGACAGATCACTTCATGTC+TGG | + | chr5.4:22301035-22301054 | MS.gene069103:intron | 40.0% | |
| TTGCATCACTGTACTTGAGA+AGG | - | chr5.4:22299899-22299918 | None:intergenic | 40.0% | |
| ! | CCGTGTAATAATGGGGAATA+TGG | + | chr5.4:22300623-22300642 | MS.gene069103:CDS | 40.0% |
| ! | GTTGATTTCTCCTTCTGGTT+GGG | + | chr5.4:22300993-22301012 | MS.gene069103:intron | 40.0% |
| ! | TAGTGGTGACTATGATAGTG+GGG | + | chr5.4:22300683-22300702 | MS.gene069103:CDS | 40.0% |
| ! | TCCTCAGAATGTTGTTGACT+TGG | + | chr5.4:22299324-22299343 | MS.gene069103:CDS | 40.0% |
| ! | TGCAGGCATAATTAGGGTTT+TGG | + | chr5.4:22301583-22301602 | MS.gene069103:intron | 40.0% |
| !! | AATAGTTGGCCTTCAAAGCA+AGG | + | chr5.4:22302432-22302451 | MS.gene069103:CDS | 40.0% |
| !! | AGCATGTTGATTTCTCCTTC+TGG | + | chr5.4:22300988-22301007 | MS.gene069103:intron | 40.0% |
| !! | AGGCATAATTAGGGTTTTGG+AGG | + | chr5.4:22301586-22301605 | MS.gene069103:intron | 40.0% |
| !! | GTTGGTAGTGCAGTTGTATA+TGG | + | chr5.4:22299790-22299809 | MS.gene069103:CDS | 40.0% |
| !! | TGTTGATTTCTCCTTCTGGT+TGG | + | chr5.4:22300992-22301011 | MS.gene069103:intron | 40.0% |
| !! | TTGAATTCTGGGATACCTCA+GGG | + | chr5.4:22302055-22302074 | MS.gene069103:intron | 40.0% |
| !! | TTTGAATTCTGGGATACCTC+AGG | + | chr5.4:22302054-22302073 | MS.gene069103:intron | 40.0% |
| !!! | CTGACTCATCATGGTTTTGA+AGG | + | chr5.4:22301828-22301847 | MS.gene069103:intron | 40.0% |
| ACCATCTCGTGCGATCAAAA+TGG | + | chr5.4:22302572-22302591 | MS.gene069103:CDS | 45.0% | |
| ACTATGATGAAGTGTGGGCT+TGG | + | chr5.4:22300024-22300043 | MS.gene069103:CDS | 45.0% | |
| ACTGTGGAGGTAGAGTTACA+TGG | + | chr5.4:22299376-22299395 | MS.gene069103:CDS | 45.0% | |
| ATACCTCAGGGAATAGCATC+TGG | + | chr5.4:22302067-22302086 | MS.gene069103:intron | 45.0% | |
| ATTGCTTGGATTGACGAGAC+AGG | + | chr5.4:22299466-22299485 | MS.gene069103:CDS | 45.0% | |
| CAAGGTTTCTGCGAAGGATA+TGG | + | chr5.4:22302153-22302172 | MS.gene069103:CDS | 45.0% | |
| CAGAAACAAGGTTTCTGCGA+AGG | + | chr5.4:22302147-22302166 | MS.gene069103:CDS | 45.0% | |
| CCACATGCTACATGTCCAAA+CGG | + | chr5.4:22299091-22299110 | MS.gene069103:CDS | 45.0% | |
| GACTCATATTGGACGGTCAT+TGG | + | chr5.4:22299222-22299241 | MS.gene069103:CDS | 45.0% | |
| GATGAAACCCTCCATCCAAA+TGG | - | chr5.4:22300965-22300984 | None:intergenic | 45.0% | |
| GCATCACTGTACTTGAGAAG+GGG | - | chr5.4:22299897-22299916 | None:intergenic | 45.0% | |
| GGGTTGTGCTTAATCTGAAG+CGG | + | chr5.4:22299056-22299075 | MS.gene069103:CDS | 45.0% | |
| GGTTCATTCCATTTGGATGG+AGG | + | chr5.4:22300954-22300973 | MS.gene069103:intron | 45.0% | |
| GTCTCGTCAATCCAAGCAAT+AGG | - | chr5.4:22299466-22299485 | None:intergenic | 45.0% | |
| TCCTGATTGCAGGGATCATA+AGG | - | chr5.4:22299535-22299554 | None:intergenic | 45.0% | |
| TCTCCACTATCCTGATTGCA+GGG | - | chr5.4:22299544-22299563 | None:intergenic | 45.0% | |
| TTCTCCACTATCCTGATTGC+AGG | - | chr5.4:22299545-22299564 | None:intergenic | 45.0% | |
| TTGCTTGGATTGACGAGACA+GGG | + | chr5.4:22299467-22299486 | MS.gene069103:CDS | 45.0% | |
| TTTGATCGCACGAGATGGTT+GGG | - | chr5.4:22302571-22302590 | None:intergenic | 45.0% | |
| ! | CAAAGGAAATTTGGCATCGG+AGG | - | chr5.4:22301295-22301314 | None:intergenic | 45.0% |
| ! | TTTTGATCGCACGAGATGGT+TGG | - | chr5.4:22302572-22302591 | None:intergenic | 45.0% |
| !! | AAAGGCATTGAAGGGGATGT+TGG | - | chr5.4:22302106-22302125 | None:intergenic | 45.0% |
| !! | AGCACAGGAAAAGGCATTGA+AGG | - | chr5.4:22302115-22302134 | None:intergenic | 45.0% |
| !! | CACAGGAAAAGGCATTGAAG+GGG | - | chr5.4:22302113-22302132 | None:intergenic | 45.0% |
| !! | CTGAGAGCATCAATAAGCAC+AGG | - | chr5.4:22302130-22302149 | None:intergenic | 45.0% |
| !! | GCACAGGAAAAGGCATTGAA+GGG | - | chr5.4:22302114-22302133 | None:intergenic | 45.0% |
| !! | GCTTGGCTTGCTTCTTCTAA+AGG | + | chr5.4:22299991-22300010 | MS.gene069103:CDS | 45.0% |
| !! | TCAGGATAGTGGAGAAAGTC+AGG | + | chr5.4:22299549-22299568 | MS.gene069103:CDS | 45.0% |
| !! | TCCATTTTGATCGCACGAGA+TGG | - | chr5.4:22302576-22302595 | None:intergenic | 45.0% |
| AAGGTCTCTTCTGCTGCTGA+AGG | + | chr5.4:22300792-22300811 | MS.gene069103:CDS | 50.0% | |
| AATATGGAGCTTCTCCGTCC+TGG | + | chr5.4:22300639-22300658 | MS.gene069103:CDS | 50.0% | |
| AGACAGTTTCGTCCCAGTAG+TGG | + | chr5.4:22300666-22300685 | MS.gene069103:CDS | 50.0% | |
| CCGTTTGGACATGTAGCATG+TGG | - | chr5.4:22299094-22299113 | None:intergenic | 50.0% | |
| GAAACTGTCTAGTGCCAGGA+CGG | - | chr5.4:22300656-22300675 | None:intergenic | 50.0% | |
| GAACCAGATGCTATTCCCTG+AGG | - | chr5.4:22302073-22302092 | None:intergenic | 50.0% | |
| GAGTCGATGCTTCCAAGTTG+GGG | + | chr5.4:22299629-22299648 | MS.gene069103:CDS | 50.0% | |
| GATCCCTGCAATCAGGATAG+TGG | + | chr5.4:22299538-22299557 | MS.gene069103:CDS | 50.0% | |
| GCCTTATGATCCCTGCAATC+AGG | + | chr5.4:22299531-22299550 | MS.gene069103:CDS | 50.0% | |
| GGAGTCGATGCTTCCAAGTT+GGG | + | chr5.4:22299628-22299647 | MS.gene069103:CDS | 50.0% | |
| TGCGAAGAAAGCAACTGTGG+AGG | + | chr5.4:22299363-22299382 | MS.gene069103:CDS | 50.0% | |
| TGGAGTCGATGCTTCCAAGT+TGG | + | chr5.4:22299627-22299646 | MS.gene069103:CDS | 50.0% | |
| TTGCATGGGACTCCAGTGAA+TGG | + | chr5.4:22302481-22302500 | MS.gene069103:intron | 50.0% | |
| ! | AAGTGTGGGCTTGGTCATTG+TGG | + | chr5.4:22300033-22300052 | MS.gene069103:CDS | 50.0% |
| ! | AGCGAGTCATCCTTTTTGCC+TGG | - | chr5.4:22302300-22302319 | None:intergenic | 50.0% |
| ! | AGTCGATGCTTCCAAGTTGG+GGG | + | chr5.4:22299630-22299649 | MS.gene069103:CDS | 50.0% |
| ! | ATAGCATCTGGTTCGCGTAG+AGG | + | chr5.4:22302079-22302098 | MS.gene069103:CDS | 50.0% |
| ! | CACGAGTCATCCTTTTTGCC+TGG | - | chr5.4:22302354-22302373 | None:intergenic | 50.0% |
| ! | CTGCTACCTTTCCTTTTGCC+AGG | + | chr5.4:22300103-22300122 | MS.gene069103:CDS | 50.0% |
| ! | GGCAAACAACGGAAAGGCAT+CGG | + | chr5.4:22299030-22299049 | MS.gene069103:CDS | 50.0% |
| ! | TGTACGAGTGCCCTTCCTTT+TGG | + | chr5.4:22301092-22301111 | MS.gene069103:intron | 50.0% |
| !! | ACAACGGAAAGGCATCGGAT+AGG | + | chr5.4:22299035-22299054 | MS.gene069103:CDS | 50.0% |
| !! | CAACGGAAAGGCATCGGATA+GGG | + | chr5.4:22299036-22299055 | MS.gene069103:CDS | 50.0% |
| !! | TGGTGACTATGATAGTGGGG+TGG | + | chr5.4:22300686-22300705 | MS.gene069103:CDS | 50.0% |
| ACTGGTCGCAGATCTCCGTT+TGG | - | chr5.4:22299109-22299128 | None:intergenic | 55.0% | |
| AGCTCAAGTGCCCAACCAGA+AGG | - | chr5.4:22301006-22301025 | None:intergenic | 55.0% | |
| ATCGCACGAGATGGTTGGGA+GGG | - | chr5.4:22302567-22302586 | None:intergenic | 55.0% | |
| GATACAAGTGATGCCCAGCG+AGG | - | chr5.4:22299136-22299155 | None:intergenic | 55.0% | |
| GGACGAAACTGTCTAGTGCC+AGG | - | chr5.4:22300660-22300679 | None:intergenic | 55.0% | |
| GTTTGCAGCGCCCTATTGCT+TGG | + | chr5.4:22299452-22299471 | MS.gene069103:CDS | 55.0% | |
| TGGACGCCCAGAACGTTTGA+TGG | + | chr5.4:22299273-22299292 | MS.gene069103:CDS | 55.0% | |
| GATCGCACGAGATGGTTGGG+AGG | - | chr5.4:22302568-22302587 | None:intergenic | 60.0% | |
| GATGCCCAGCGAGGTAACAC+TGG | - | chr5.4:22299127-22299146 | None:intergenic | 60.0% | |
| GCACTCGTACAGCTTGGCAG+GGG | - | chr5.4:22301083-22301102 | None:intergenic | 60.0% | |
| GCGACCAGTGTTACCTCGCT+GGG | + | chr5.4:22299120-22299139 | MS.gene069103:CDS | 60.0% | |
| GGCACTCGTACAGCTTGGCA+GGG | - | chr5.4:22301084-22301103 | None:intergenic | 60.0% | |
| TGCGACCAGTGTTACCTCGC+TGG | + | chr5.4:22299119-22299138 | MS.gene069103:CDS | 60.0% | |
| ! | CAAGTTGGGGGAGTGCACAG+GGG | + | chr5.4:22299642-22299661 | MS.gene069103:CDS | 60.0% |
| ! | CCAAGTTGGGGGAGTGCACA+GGG | + | chr5.4:22299641-22299660 | MS.gene069103:CDS | 60.0% |
| ! | TCCAAGTTGGGGGAGTGCAC+AGG | + | chr5.4:22299640-22299659 | MS.gene069103:CDS | 60.0% |
| !! | GGAAGGGCACTCGTACAGCT+TGG | - | chr5.4:22301089-22301108 | None:intergenic | 60.0% |
| CCCTGTGCACTCCCCCAACT+TGG | - | chr5.4:22299644-22299663 | None:intergenic | 65.0% | |
| GGGCACTCGTACAGCTTGGC+AGG | - | chr5.4:22301085-22301104 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 22299025 | 22302605 | 22299025 | ID=MS.gene069103 |
| chr5.4 | mRNA | 22299025 | 22302605 | 22299025 | ID=MS.gene069103.t1;Parent=MS.gene069103 |
| chr5.4 | exon | 22299025 | 22300124 | 22299025 | ID=MS.gene069103.t1.exon1;Parent=MS.gene069103.t1 |
| chr5.4 | CDS | 22299025 | 22300124 | 22299025 | ID=cds.MS.gene069103.t1;Parent=MS.gene069103.t1 |
| chr5.4 | exon | 22300572 | 22300813 | 22300572 | ID=MS.gene069103.t1.exon2;Parent=MS.gene069103.t1 |
| chr5.4 | CDS | 22300572 | 22300813 | 22300572 | ID=cds.MS.gene069103.t1;Parent=MS.gene069103.t1 |
| chr5.4 | exon | 22301161 | 22301264 | 22301161 | ID=MS.gene069103.t1.exon3;Parent=MS.gene069103.t1 |
| chr5.4 | CDS | 22301161 | 22301264 | 22301161 | ID=cds.MS.gene069103.t1;Parent=MS.gene069103.t1 |
| chr5.4 | exon | 22302076 | 22302207 | 22302076 | ID=MS.gene069103.t1.exon4;Parent=MS.gene069103.t1 |
| chr5.4 | CDS | 22302076 | 22302207 | 22302076 | ID=cds.MS.gene069103.t1;Parent=MS.gene069103.t1 |
| chr5.4 | exon | 22302355 | 22302453 | 22302355 | ID=MS.gene069103.t1.exon5;Parent=MS.gene069103.t1 |
| chr5.4 | CDS | 22302355 | 22302453 | 22302355 | ID=cds.MS.gene069103.t1;Parent=MS.gene069103.t1 |
| chr5.4 | exon | 22302561 | 22302605 | 22302561 | ID=MS.gene069103.t1.exon6;Parent=MS.gene069103.t1 |
| chr5.4 | CDS | 22302561 | 22302605 | 22302561 | ID=cds.MS.gene069103.t1;Parent=MS.gene069103.t1 |
| Gene Sequence |
| Protein sequence |
