Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027783.t1 | XP_003613057.1 | 95.6 | 573 | 25 | 0 | 1 | 573 | 1 | 573 | 0.00E+00 | 1103.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027783.t1 | Q8RY59 | 41.7 | 566 | 298 | 14 | 17 | 563 | 21 | 573 | 5.2e-107 | 389.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027783.t1 | G7JWF4 | 95.6 | 573 | 25 | 0 | 1 | 573 | 1 | 573 | 0.0e+00 | 1103.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene34237 | MS.gene027783 | PPI |
| MS.gene76207 | MS.gene027783 | PPI |
| MS.gene007901 | MS.gene027783 | PPI |
| MS.gene74956 | MS.gene027783 | PPI |
| MS.gene027783 | MS.gene029308 | PPI |
| MS.gene057563 | MS.gene027783 | PPI |
| MS.gene032270 | MS.gene027783 | PPI |
| MS.gene027783 | MS.gene001066 | PPI |
| MS.gene021778 | MS.gene027783 | PPI |
| MS.gene027783 | MS.gene046455 | PPI |
| MS.gene046444 | MS.gene027783 | PPI |
| MS.gene36039 | MS.gene027783 | PPI |
| MS.gene070678 | MS.gene027783 | PPI |
| MS.gene046409 | MS.gene027783 | PPI |
| MS.gene065039 | MS.gene027783 | PPI |
| MS.gene070621 | MS.gene027783 | PPI |
| MS.gene79552 | MS.gene027783 | PPI |
| MS.gene027783 | MS.gene069103 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027783.t1 | MTR_5g032190 | 95.637 | 573 | 25 | 0 | 1 | 573 | 1 | 573 | 0.0 | 1147 |
| MS.gene027783.t1 | MTR_5g032190 | 95.436 | 482 | 22 | 0 | 1 | 482 | 1 | 482 | 0.0 | 967 |
| MS.gene027783.t1 | MTR_5g032190 | 95.378 | 476 | 22 | 0 | 1 | 476 | 1 | 476 | 0.0 | 955 |
| MS.gene027783.t1 | MTR_1g112330 | 78.246 | 570 | 115 | 4 | 1 | 562 | 1 | 569 | 0.0 | 901 |
| MS.gene027783.t1 | MTR_1g112330 | 77.895 | 570 | 114 | 5 | 1 | 562 | 1 | 566 | 0.0 | 892 |
| MS.gene027783.t1 | MTR_1g112330 | 82.198 | 455 | 74 | 2 | 1 | 448 | 1 | 455 | 0.0 | 771 |
| MS.gene027783.t1 | MTR_7g011550 | 45.855 | 567 | 268 | 9 | 1 | 561 | 1 | 534 | 3.21e-156 | 458 |
| MS.gene027783.t1 | MTR_5g029580 | 44.615 | 325 | 166 | 5 | 234 | 553 | 27 | 342 | 5.38e-88 | 276 |
| MS.gene027783.t1 | MTR_3g077870 | 31.077 | 325 | 172 | 8 | 233 | 549 | 23 | 303 | 5.75e-39 | 145 |
| MS.gene027783.t1 | MTR_4g105740 | 31.333 | 300 | 160 | 8 | 266 | 560 | 46 | 304 | 7.47e-38 | 142 |
| MS.gene027783.t1 | MTR_4g105740 | 31.438 | 299 | 159 | 8 | 266 | 559 | 46 | 303 | 1.10e-37 | 142 |
| MS.gene027783.t1 | MTR_8g088250 | 28.136 | 295 | 160 | 6 | 270 | 553 | 26 | 279 | 1.54e-30 | 121 |
| MS.gene027783.t1 | MTR_2g090130 | 42.000 | 150 | 50 | 2 | 271 | 418 | 103 | 217 | 1.22e-29 | 116 |
| MS.gene027783.t1 | MTR_2g090130 | 57.377 | 61 | 26 | 0 | 101 | 161 | 43 | 103 | 2.76e-19 | 87.0 |
| MS.gene027783.t1 | MTR_7g011640 | 49.550 | 111 | 35 | 3 | 101 | 210 | 15 | 105 | 1.38e-22 | 94.7 |
| MS.gene027783.t1 | MTR_7g011880 | 35.032 | 157 | 73 | 4 | 376 | 531 | 58 | 186 | 4.54e-19 | 85.9 |
| MS.gene027783.t1 | MTR_7g061850 | 40.625 | 96 | 52 | 2 | 235 | 325 | 28 | 123 | 2.37e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027783.t1 | AT1G32230 | 41.667 | 564 | 294 | 13 | 17 | 560 | 21 | 569 | 3.17e-136 | 408 |
| MS.gene027783.t1 | AT1G32230 | 41.623 | 567 | 296 | 13 | 17 | 563 | 21 | 572 | 5.40e-136 | 408 |
| MS.gene027783.t1 | AT1G32230 | 41.623 | 567 | 296 | 13 | 17 | 563 | 21 | 572 | 5.40e-136 | 408 |
| MS.gene027783.t1 | AT1G32230 | 41.623 | 567 | 296 | 13 | 17 | 563 | 21 | 572 | 5.40e-136 | 408 |
| MS.gene027783.t1 | AT1G32230 | 41.623 | 567 | 296 | 13 | 17 | 563 | 21 | 572 | 5.40e-136 | 408 |
| MS.gene027783.t1 | AT1G32230 | 41.828 | 569 | 293 | 15 | 17 | 563 | 21 | 573 | 2.52e-135 | 406 |
| MS.gene027783.t1 | AT2G35510 | 39.619 | 578 | 320 | 11 | 1 | 560 | 1 | 567 | 1.68e-124 | 378 |
| MS.gene027783.t1 | AT2G35510 | 39.619 | 578 | 320 | 11 | 1 | 560 | 1 | 567 | 1.68e-124 | 378 |
| MS.gene027783.t1 | AT2G35510 | 40.959 | 459 | 252 | 8 | 1 | 448 | 1 | 451 | 6.99e-108 | 331 |
| MS.gene027783.t1 | AT1G70440 | 28.190 | 337 | 190 | 8 | 226 | 550 | 2 | 298 | 2.06e-38 | 144 |
| MS.gene027783.t1 | AT1G70440 | 28.190 | 337 | 190 | 8 | 226 | 550 | 2 | 298 | 2.06e-38 | 144 |
| MS.gene027783.t1 | AT1G23550 | 33.333 | 237 | 117 | 5 | 316 | 548 | 109 | 308 | 9.62e-37 | 139 |
| MS.gene027783.t1 | AT5G62520 | 29.644 | 253 | 130 | 5 | 301 | 549 | 89 | 297 | 1.27e-26 | 110 |
| MS.gene027783.t1 | AT3G47720 | 26.667 | 270 | 136 | 7 | 292 | 550 | 85 | 303 | 6.66e-23 | 100 |
| MS.gene027783.t1 | AT5G62520 | 33.562 | 146 | 88 | 3 | 301 | 442 | 89 | 229 | 3.21e-20 | 90.5 |
Find 125 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGTGATATTGACGAAAA+TGG | 0.188994 | 5.2:+22197726 | MS.gene027783:CDS |
| TCAGAATCAGCATAAATTTC+AGG | 0.192300 | 5.2:-22196643 | None:intergenic |
| TGTTTGACAACTTCGTTTCT+TGG | 0.207598 | 5.2:-22196298 | None:intergenic |
| CATTTAGAAATTGAAATAAA+TGG | 0.220833 | 5.2:+22196748 | MS.gene027783:CDS |
| ATATGCATTATCTGCAATTC+AGG | 0.249387 | 5.2:+22199324 | MS.gene027783:CDS |
| ATTTAATATCATTAGGATCT+TGG | 0.284189 | 5.2:-22196723 | None:intergenic |
| TTGAAACTAACAACATATTC+TGG | 0.302685 | 5.2:-22197918 | None:intergenic |
| TCATCTCCCAATACTTAATA+AGG | 0.303795 | 5.2:-22199738 | None:intergenic |
| TGATAGACCATCAAACGTTC+TGG | 0.315101 | 5.2:-22196421 | None:intergenic |
| TTCTCCACTATCCTGATTGC+AGG | 0.320979 | 5.2:-22196683 | None:intergenic |
| CAAGGTTTCTGCGAAGGATA+TGG | 0.322660 | 5.2:+22199292 | MS.gene027783:CDS |
| CCGTGTAATAATGGGGAATA+TGG | 0.323010 | 5.2:+22197770 | MS.gene027783:CDS |
| AGAAAAGTACCTTGCTTTGA+AGG | 0.336075 | 5.2:-22199580 | None:intergenic |
| TGTATATGGAAGGTTGGATT+TGG | 0.339592 | 5.2:+22196945 | MS.gene027783:CDS |
| GTTGGTAGTGCAGTTGTATA+TGG | 0.343580 | 5.2:+22196931 | MS.gene027783:CDS |
| AAATGTAATTTAATATCATT+AGG | 0.344899 | 5.2:-22196730 | None:intergenic |
| ACCATCTCGTGTGATCAAAA+TGG | 0.346697 | 5.2:+22199713 | MS.gene027783:CDS |
| ATCCAAGATACTATATAGTA+TGG | 0.349263 | 5.2:+22197868 | MS.gene027783:CDS |
| TGTACAGAAGATGTTTCTTA+AGG | 0.349580 | 5.2:+22196972 | MS.gene027783:CDS |
| ATTGTGATATTGACGAAAAT+GGG | 0.350719 | 5.2:+22197727 | MS.gene027783:CDS |
| CTGGTAATTACCAGGCAAAA+AGG | 0.353126 | 5.2:+22199480 | MS.gene027783:intron |
| TATCAGATGAATTTGAAATC+TGG | 0.365305 | 5.2:+22196571 | MS.gene027783:CDS |
| TTCCATACTATATAGTATCT+TGG | 0.367221 | 5.2:-22197870 | None:intergenic |
| AGAATATGTTGTTAGTTTCA+AGG | 0.376305 | 5.2:+22197920 | MS.gene027783:CDS |
| GCTTGGCTTGCTTCTTCTAA+AGG | 0.378498 | 5.2:+22197132 | MS.gene027783:CDS |
| CTTAAGGGAACTAGTAGTTT+TGG | 0.380222 | 5.2:+22196988 | MS.gene027783:CDS |
| GTACAGAAGATGTTTCTTAA+GGG | 0.381330 | 5.2:+22196973 | MS.gene027783:CDS |
| GTCTCGTCAATCCAAGCAAT+AGG | 0.384507 | 5.2:-22196604 | None:intergenic |
| CGTTTGATGGTCTATCAAAA+TGG | 0.393202 | 5.2:+22196427 | MS.gene027783:CDS |
| CGAAAATGGGGTTCGACACT+TGG | 0.398654 | 5.2:+22197740 | MS.gene027783:CDS |
| GTTTGCAGCGCCCTATTGCT+TGG | 0.403920 | 5.2:+22196593 | MS.gene027783:CDS |
| GACTCATATTGGACGGTCAT+TGG | 0.404817 | 5.2:+22196363 | MS.gene027783:CDS |
| GGAGTCGATGCTTCCAAGTT+GGG | 0.405561 | 5.2:+22196769 | MS.gene027783:CDS |
| AGAATGTTGTTGACTTGGTT+AGG | 0.415750 | 5.2:+22196470 | MS.gene027783:CDS |
| AGTAGCAATAACATGGGAAA+TGG | 0.417478 | 5.2:+22196871 | MS.gene027783:CDS |
| TCCTGATTGCAGGGATCATA+AGG | 0.421377 | 5.2:-22196673 | None:intergenic |
| TTTGATCACACGAGATGGTT+GGG | 0.422810 | 5.2:-22199709 | None:intergenic |
| TCTAAATGCACACATGGCTT+TGG | 0.435149 | 5.2:+22197207 | MS.gene027783:CDS |
| TAGTCTTACTTCCTAAAAGA+AGG | 0.436907 | 5.2:-22198309 | None:intergenic |
| GCCTTATGATCCCTGCAATC+AGG | 0.440028 | 5.2:+22196672 | MS.gene027783:CDS |
| ACGAAATCAGAGACTCATAT+TGG | 0.440224 | 5.2:+22196352 | MS.gene027783:CDS |
| TCCTCAGAATGTTGTTGACT+TGG | 0.450948 | 5.2:+22196465 | MS.gene027783:CDS |
| GCGACCAGTGTTACCTCGTT+GGG | 0.451664 | 5.2:+22196261 | MS.gene027783:CDS |
| ACTATCATAGTCACCACTAC+TGG | 0.457911 | 5.2:-22197826 | None:intergenic |
| TCAGGATAGTGGAGAAAGTC+AGG | 0.458623 | 5.2:+22196690 | MS.gene027783:CDS |
| TGCAGTTGTATATGGAAGGT+TGG | 0.460207 | 5.2:+22196939 | MS.gene027783:CDS |
| AGTAGTGGTGACTATGATAG+TGG | 0.460572 | 5.2:+22197828 | MS.gene027783:CDS |
| CTCTTGAGAGCTACAATAGT+TGG | 0.472193 | 5.2:+22199557 | MS.gene027783:CDS |
| AGCACAGGAAAAGGCATTGA+AGG | 0.473023 | 5.2:-22199251 | None:intergenic |
| CAACGGAAAGGCATCGGATA+GGG | 0.473840 | 5.2:+22196177 | MS.gene027783:CDS |
| CAGAATCAGCATAAATTTCA+GGG | 0.479346 | 5.2:-22196642 | None:intergenic |
| AGTATGCTTAACTATAACAT+TGG | 0.483021 | 5.2:-22196809 | None:intergenic |
| TCTCGTCAATCCAAGCAATA+GGG | 0.485939 | 5.2:-22196603 | None:intergenic |
| ATGCTAATGTTCGATATGCT+TGG | 0.490597 | 5.2:+22197115 | MS.gene027783:CDS |
| AAGGTCTCTTCTGCTGCTGA+AGG | 0.492093 | 5.2:+22197939 | MS.gene027783:CDS |
| ATTGCTTGGATTGACGAGAC+AGG | 0.495738 | 5.2:+22196607 | MS.gene027783:CDS |
| TAGAAATTAAACCTGGCAAA+AGG | 0.497397 | 5.2:-22197255 | None:intergenic |
| GATAGACCATCAAACGTTCT+GGG | 0.497415 | 5.2:-22196420 | None:intergenic |
| TGGACGCCCAGAACGTTTGA+TGG | 0.500372 | 5.2:+22196414 | MS.gene027783:CDS |
| ATACCTCAGGGAATAGCATC+TGG | 0.501440 | 5.2:+22199206 | MS.gene027783:intron |
| GCATCAATAAGCACAGGAAA+AGG | 0.503405 | 5.2:-22199260 | None:intergenic |
| TGGAGTCGATGCTTCCAAGT+TGG | 0.503473 | 5.2:+22196768 | MS.gene027783:CDS |
| ACTATGATGAAGTGTGGGCT+TGG | 0.505685 | 5.2:+22197165 | MS.gene027783:CDS |
| TACAGTGATGCAATCACGAT+TGG | 0.505775 | 5.2:+22197047 | MS.gene027783:CDS |
| GATCCCTGCAATCAGGATAG+TGG | 0.509927 | 5.2:+22196679 | MS.gene027783:CDS |
| AATATGGAGCTTCTCCGTCC+TGG | 0.513713 | 5.2:+22197786 | MS.gene027783:CDS |
| AAAGGCATTGAAGGGGATGT+TGG | 0.517939 | 5.2:-22199242 | None:intergenic |
| TGCGACCAGTGTTACCTCGT+TGG | 0.519288 | 5.2:+22196260 | MS.gene027783:CDS |
| GGCAAACAACGGAAAGGCAT+CGG | 0.532519 | 5.2:+22196171 | MS.gene027783:CDS |
| CTATCATAGTCACCACTACT+GGG | 0.534346 | 5.2:-22197825 | None:intergenic |
| CTATCAAAATGGTGAATGGA+AGG | 0.536490 | 5.2:+22196438 | MS.gene027783:CDS |
| CTATATAGTATCTTGGATTG+TGG | 0.536691 | 5.2:-22197863 | None:intergenic |
| TGCATCACTGTACTTGAGAA+GGG | 0.539798 | 5.2:-22197036 | None:intergenic |
| TATATGAATTATAAGAAGAG+TGG | 0.542935 | 5.2:+22196394 | MS.gene027783:CDS |
| ATATGAGTCTCTGATTTCGT+CGG | 0.544734 | 5.2:-22196349 | None:intergenic |
| CAACATATTCTGGACAGATG+TGG | 0.545442 | 5.2:-22197908 | None:intergenic |
| ACTGGTCGCAGATCTCCGTT+TGG | 0.546119 | 5.2:-22196247 | None:intergenic |
| ACAACGGAAAGGCATCGGAT+AGG | 0.546402 | 5.2:+22196176 | MS.gene027783:CDS |
| TGGTCTATCAAAATGGTGAA+TGG | 0.549899 | 5.2:+22196434 | MS.gene027783:CDS |
| AACATATTCTGGACAGATGT+GGG | 0.551162 | 5.2:-22197907 | None:intergenic |
| GGACGAAACTGTCTAGTGCC+AGG | 0.552779 | 5.2:-22197804 | None:intergenic |
| CCACATGCTACATGTCCAAA+CGG | 0.553167 | 5.2:+22196232 | MS.gene027783:CDS |
| AACATGGGAAATGGAAATGT+TGG | 0.556039 | 5.2:+22196880 | MS.gene027783:CDS |
| TATCTACTATGATGAAGTGT+GGG | 0.563052 | 5.2:+22197160 | MS.gene027783:CDS |
| GCACAGGAAAAGGCATTGAA+GGG | 0.565819 | 5.2:-22199250 | None:intergenic |
| ATTAAACCTGGCAAAAGGAA+AGG | 0.568389 | 5.2:-22197250 | None:intergenic |
| AATAGTTGGCCTTCAAAGCA+AGG | 0.570840 | 5.2:+22199571 | MS.gene027783:CDS |
| CTGAGAGCATCAATAAGCAC+AGG | 0.571313 | 5.2:-22199266 | None:intergenic |
| TATTGATGCTCTCAGAAACA+AGG | 0.572331 | 5.2:+22199274 | MS.gene027783:CDS |
| TGAAGATAGTAGCAATAACA+TGG | 0.572879 | 5.2:+22196864 | MS.gene027783:CDS |
| CAGAAACAAGGTTTCTGCGA+AGG | 0.572993 | 5.2:+22199286 | MS.gene027783:CDS |
| GTAGTGCAGTTGTATATGGA+AGG | 0.578361 | 5.2:+22196935 | MS.gene027783:CDS |
| ACCAAGTCAACAACATTCTG+AGG | 0.581281 | 5.2:-22196466 | None:intergenic |
| TTGCTTGGATTGACGAGACA+GGG | 0.581940 | 5.2:+22196608 | MS.gene027783:CDS |
| GAGTCGATGCTTCCAAGTTG+GGG | 0.583392 | 5.2:+22196770 | MS.gene027783:CDS |
| TTGCATCACTGTACTTGAGA+AGG | 0.584101 | 5.2:-22197037 | None:intergenic |
| AAGTGTGGGCTTGGTCATTG+TGG | 0.585698 | 5.2:+22197174 | MS.gene027783:CDS |
| CCATATTCCCCATTATTACA+CGG | 0.586757 | 5.2:-22197770 | None:intergenic |
| TCTCCACTATCCTGATTGCA+GGG | 0.589306 | 5.2:-22196682 | None:intergenic |
| ATCACACGAGATGGTTGGGA+GGG | 0.590498 | 5.2:-22199705 | None:intergenic |
| TATGCATTATCTGCAATTCA+GGG | 0.603277 | 5.2:+22199325 | MS.gene027783:CDS |
| AGACAGTTTCGTCCCAGTAG+TGG | 0.612844 | 5.2:+22197813 | MS.gene027783:CDS |
| ATAGCATCTGGTTCGCGTAG+AGG | 0.613583 | 5.2:+22199218 | MS.gene027783:CDS |
| GTAGTGGTGACTATGATAGT+GGG | 0.614725 | 5.2:+22197829 | MS.gene027783:CDS |
| TCTACATCTAAATGCACACA+TGG | 0.616416 | 5.2:+22197201 | MS.gene027783:CDS |
| CCGTTTGGACATGTAGCATG+TGG | 0.622892 | 5.2:-22196232 | None:intergenic |
| GATGCCCAACGAGGTAACAC+TGG | 0.624845 | 5.2:-22196265 | None:intergenic |
| GGGTTGTGCTTAATCTGAAG+CGG | 0.628518 | 5.2:+22196197 | MS.gene027783:CDS |
| GATCACACGAGATGGTTGGG+AGG | 0.630443 | 5.2:-22199706 | None:intergenic |
| GAAACTGTCTAGTGCCAGGA+CGG | 0.638018 | 5.2:-22197800 | None:intergenic |
| TTGTGATATTGACGAAAATG+GGG | 0.640860 | 5.2:+22197728 | MS.gene027783:CDS |
| GCATCACTGTACTTGAGAAG+GGG | 0.643866 | 5.2:-22197035 | None:intergenic |
| CTATCTACTATGATGAAGTG+TGG | 0.646279 | 5.2:+22197159 | MS.gene027783:CDS |
| AATCAGAGACTCATATTGGA+CGG | 0.648143 | 5.2:+22196356 | MS.gene027783:CDS |
| GAAGATAGTAGCAATAACAT+GGG | 0.651958 | 5.2:+22196865 | MS.gene027783:CDS |
| CATGGAGGCAAACAACGGAA+AGG | 0.657589 | 5.2:+22196165 | None:intergenic |
| CACAGGAAAAGGCATTGAAG+GGG | 0.658134 | 5.2:-22199249 | None:intergenic |
| ACTGTGGAGGTAGAGTTACA+TGG | 0.660219 | 5.2:+22196517 | MS.gene027783:CDS |
| TGCGAAGAAAGCAACTGTGG+AGG | 0.668909 | 5.2:+22196504 | MS.gene027783:CDS |
| AGTCGATGCTTCCAAGTTGG+GGG | 0.670164 | 5.2:+22196771 | MS.gene027783:CDS |
| TAATGCGAAGAAAGCAACTG+TGG | 0.675973 | 5.2:+22196501 | MS.gene027783:CDS |
| ATAAACATGGAGGCAAACAA+CGG | 0.683583 | 5.2:+22196160 | None:intergenic |
| TGGTGACTATGATAGTGGGG+TGG | 0.700703 | 5.2:+22197833 | MS.gene027783:CDS |
| TAGTGGTGACTATGATAGTG+GGG | 0.714306 | 5.2:+22197830 | MS.gene027783:CDS |
| GATACAAGTGATGCCCAACG+AGG | 0.767068 | 5.2:-22196274 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGTAATTTAATATCATT+AGG | - | chr5.2:22196733-22196752 | None:intergenic | 10.0% |
| !! | AACTTAATATATATGAAAAA+AGG | - | chr5.2:22198503-22198522 | None:intergenic | 10.0% |
| !! | ATTGATGTATAAATAAATAT+GGG | - | chr5.2:22197588-22197607 | None:intergenic | 10.0% |
| !! | AGGAAAAAAATTATTTAGAT+GGG | + | chr5.2:22198753-22198772 | MS.gene027783:intron | 15.0% |
| !! | CATTGATGTATAAATAAATA+TGG | - | chr5.2:22197589-22197608 | None:intergenic | 15.0% |
| !! | CATTTAGAAATTGAAATAAA+TGG | + | chr5.2:22196748-22196767 | MS.gene027783:CDS | 15.0% |
| !! | TTGATGTATAAATAAATATG+GGG | - | chr5.2:22197587-22197606 | None:intergenic | 15.0% |
| !! | TTTACACAAGTATTTATTTA+AGG | + | chr5.2:22197369-22197388 | MS.gene027783:intron | 15.0% |
| !!! | AAGACTAAGAATAATATTTT+TGG | + | chr5.2:22198325-22198344 | MS.gene027783:CDS | 15.0% |
| !!! | AGACTAAGAATAATATTTTT+GGG | + | chr5.2:22198326-22198345 | MS.gene027783:CDS | 15.0% |
| !!! | ATTTTAATAAAATTCTGAGA+AGG | + | chr5.2:22198937-22198956 | MS.gene027783:intron | 15.0% |
| !!! | GGAATTGATAATTTAATAAA+AGG | + | chr5.2:22198629-22198648 | MS.gene027783:intron | 15.0% |
| !!! | TATATTTTTATTTTGCTCAA+CGG | - | chr5.2:22196911-22196930 | None:intergenic | 15.0% |
| !!! | TTTTTATTATTCTGTTGTAA+TGG | + | chr5.2:22197662-22197681 | MS.gene027783:intron | 15.0% |
| !! | ACCAATATTATAAACGAAAA+TGG | - | chr5.2:22198038-22198057 | None:intergenic | 20.0% |
| !! | AGAAGACATAAAAGAAATAA+AGG | - | chr5.2:22197977-22197996 | None:intergenic | 20.0% |
| !! | ATAAATAAATATGGGGAAAA+AGG | - | chr5.2:22197580-22197599 | None:intergenic | 20.0% |
| !! | ATATAAAAGATGAAACACAT+TGG | - | chr5.2:22198569-22198588 | None:intergenic | 20.0% |
| !! | ATTTAATATCATTAGGATCT+TGG | - | chr5.2:22196726-22196745 | None:intergenic | 20.0% |
| !! | GAGCAAAATAAAAATATAGT+TGG | + | chr5.2:22196913-22196932 | MS.gene027783:CDS | 20.0% |
| !! | GAGGAAAAAAATTATTTAGA+TGG | + | chr5.2:22198752-22198771 | MS.gene027783:intron | 20.0% |
| !! | TATATATGAAAAAAGGAAAG+TGG | - | chr5.2:22198496-22198515 | None:intergenic | 20.0% |
| !! | TATATGAATTATAAGAAGAG+TGG | + | chr5.2:22196394-22196413 | MS.gene027783:CDS | 20.0% |
| !! | TATTATAAACGAAAATGGAA+AGG | - | chr5.2:22198033-22198052 | None:intergenic | 20.0% |
| !!! | AAAGGATCTTATTTTTTGTT+AGG | - | chr5.2:22198015-22198034 | None:intergenic | 20.0% |
| !!! | AATTCAATAGTTTTTTCCTT+TGG | + | chr5.2:22197344-22197363 | MS.gene027783:intron | 20.0% |
| !!! | AGTATTATAGAACATTTTCA+AGG | - | chr5.2:22197478-22197497 | None:intergenic | 20.0% |
| !!! | GACTAAGAATAATATTTTTG+GGG | + | chr5.2:22198327-22198346 | MS.gene027783:CDS | 20.0% |
| !!! | GATATATAATGCATTTTTAC+AGG | + | chr5.2:22198286-22198305 | MS.gene027783:intron | 20.0% |
| !!! | TAACTTGTTGATATATGATT+CGG | + | chr5.2:22198080-22198099 | MS.gene027783:intron | 20.0% |
| !!! | TATAAATTGTCATTGTTTTC+TGG | + | chr5.2:22199407-22199426 | MS.gene027783:intron | 20.0% |
| !!! | TCCATTTTCGTTTATAATAT+TGG | + | chr5.2:22198034-22198053 | MS.gene027783:intron | 20.0% |
| ! | AAAAATTATTTAGATGGGAC+AGG | + | chr5.2:22198758-22198777 | MS.gene027783:intron | 25.0% |
| ! | AAATTACGAAAAATTGTCGT+GGG | + | chr5.2:22197091-22197110 | MS.gene027783:CDS | 25.0% |
| ! | AAGAAACCGTTTAAACAATT+AGG | - | chr5.2:22199678-22199697 | None:intergenic | 25.0% |
| ! | AATACTTGTGTAAAAACCAA+AGG | - | chr5.2:22197363-22197382 | None:intergenic | 25.0% |
| ! | ACAATTGACAATTATAGAAG+TGG | - | chr5.2:22197442-22197461 | None:intergenic | 25.0% |
| ! | AGTATGCTTAACTATAACAT+TGG | - | chr5.2:22196812-22196831 | None:intergenic | 25.0% |
| ! | ATACCTCCTAATTGTTTAAA+CGG | + | chr5.2:22199669-22199688 | MS.gene027783:intron | 25.0% |
| ! | ATCCAAGATACTATATAGTA+TGG | + | chr5.2:22197868-22197887 | MS.gene027783:CDS | 25.0% |
| ! | ATTGTGATATTGACGAAAAT+GGG | + | chr5.2:22197727-22197746 | MS.gene027783:CDS | 25.0% |
| ! | CACAAGTATTTATTTAAGGA+TGG | + | chr5.2:22197373-22197392 | MS.gene027783:intron | 25.0% |
| ! | TGATGATTAGAAATTAAACC+TGG | - | chr5.2:22197265-22197284 | None:intergenic | 25.0% |
| ! | TTATCAATTCCTCTATATTC+TGG | - | chr5.2:22198620-22198639 | None:intergenic | 25.0% |
| ! | TTCCATACTATATAGTATCT+TGG | - | chr5.2:22197873-22197892 | None:intergenic | 25.0% |
| ! | TTGAAACTAACAACATATTC+TGG | - | chr5.2:22197921-22197940 | None:intergenic | 25.0% |
| !! | AGAATATGTTGTTAGTTTCA+AGG | + | chr5.2:22197920-22197939 | MS.gene027783:CDS | 25.0% |
| !! | CGAATCAATTTTTGAATTCT+GGG | + | chr5.2:22199183-22199202 | MS.gene027783:intron | 25.0% |
| !! | TATCAGATGAATTTGAAATC+TGG | + | chr5.2:22196571-22196590 | MS.gene027783:CDS | 25.0% |
| !! | TCGAATCAATTTTTGAATTC+TGG | + | chr5.2:22199182-22199201 | MS.gene027783:intron | 25.0% |
| !! | TTTAAACAATTAGGAGGTAT+AGG | - | chr5.2:22199669-22199688 | None:intergenic | 25.0% |
| !! | TTTTACTATCTAAGCAATCT+AGG | + | chr5.2:22199011-22199030 | MS.gene027783:intron | 25.0% |
| !!! | AAATGCATTGCTTTTTACAA+AGG | - | chr5.2:22198459-22198478 | None:intergenic | 25.0% |
| !!! | TGCTTTTTACAAAGGAAATT+TGG | - | chr5.2:22198451-22198470 | None:intergenic | 25.0% |
| AAAAATTCAGCACAAGATGA+TGG | - | chr5.2:22196543-22196562 | None:intergenic | 30.0% | |
| AAACAAGTTTCCAAAAGGAA+GGG | - | chr5.2:22198252-22198271 | None:intergenic | 30.0% | |
| AAACCGTTTAAACAATTAGG+AGG | - | chr5.2:22199675-22199694 | None:intergenic | 30.0% | |
| AAGTGATCTGTCAAATATGA+AGG | - | chr5.2:22198176-22198195 | None:intergenic | 30.0% | |
| AATTACGAAAAATTGTCGTG+GGG | + | chr5.2:22197092-22197111 | MS.gene027783:CDS | 30.0% | |
| ATAAGTAACATGTCTTCAGA+AGG | + | chr5.2:22198587-22198606 | MS.gene027783:intron | 30.0% | |
| ATATGCATTATCTGCAATTC+AGG | + | chr5.2:22199324-22199343 | MS.gene027783:CDS | 30.0% | |
| CAGAATCAGCATAAATTTCA+GGG | - | chr5.2:22196645-22196664 | None:intergenic | 30.0% | |
| CATTGTGATATTGACGAAAA+TGG | + | chr5.2:22197726-22197745 | MS.gene027783:CDS | 30.0% | |
| CTATATAGTATCTTGGATTG+TGG | - | chr5.2:22197866-22197885 | None:intergenic | 30.0% | |
| GAAAGAAACAAGTTTCCAAA+AGG | - | chr5.2:22198257-22198276 | None:intergenic | 30.0% | |
| GAAATTACGAAAAATTGTCG+TGG | + | chr5.2:22197090-22197109 | MS.gene027783:CDS | 30.0% | |
| GAAGATAGTAGCAATAACAT+GGG | + | chr5.2:22196865-22196884 | MS.gene027783:CDS | 30.0% | |
| GATATCAATTAAGACAGAGA+CGG | - | chr5.2:22199382-22199401 | None:intergenic | 30.0% | |
| GGATAAATTCCAGAATATAG+AGG | + | chr5.2:22198608-22198627 | MS.gene027783:intron | 30.0% | |
| GTACAGAAGATGTTTCTTAA+GGG | + | chr5.2:22196973-22196992 | MS.gene027783:CDS | 30.0% | |
| TAGAAATTAAACCTGGCAAA+AGG | - | chr5.2:22197258-22197277 | None:intergenic | 30.0% | |
| TAGATATGCAGGCATAATTA+GGG | + | chr5.2:22198724-22198743 | MS.gene027783:intron | 30.0% | |
| TATAGATTTCTGACTCATCT+TGG | + | chr5.2:22198966-22198985 | MS.gene027783:intron | 30.0% | |
| TATCTACTATGATGAAGTGT+GGG | + | chr5.2:22197160-22197179 | MS.gene027783:CDS | 30.0% | |
| TATGCATTATCTGCAATTCA+GGG | + | chr5.2:22199325-22199344 | MS.gene027783:CDS | 30.0% | |
| TCAGAATCAGCATAAATTTC+AGG | - | chr5.2:22196646-22196665 | None:intergenic | 30.0% | |
| TCTACTAATATATCTCTGCA+TGG | + | chr5.2:22197399-22197418 | MS.gene027783:intron | 30.0% | |
| TGAAGATAGTAGCAATAACA+TGG | + | chr5.2:22196864-22196883 | MS.gene027783:CDS | 30.0% | |
| TGTACAGAAGATGTTTCTTA+AGG | + | chr5.2:22196972-22196991 | MS.gene027783:CDS | 30.0% | |
| TTACAAAGGAAATTTGGCAT+CGG | - | chr5.2:22198445-22198464 | None:intergenic | 30.0% | |
| TTGTGATATTGACGAAAATG+GGG | + | chr5.2:22197728-22197747 | MS.gene027783:CDS | 30.0% | |
| ! | ATTTTTACAGGCCTTCTTTT+AGG | + | chr5.2:22198298-22198317 | MS.gene027783:intron | 30.0% |
| ! | CATTGGCTATCTTAATATCA+AGG | - | chr5.2:22198552-22198571 | None:intergenic | 30.0% |
| ! | TAGTCTTACTTCCTAAAAGA+AGG | - | chr5.2:22198312-22198331 | None:intergenic | 30.0% |
| ! | TCTGTTGTAATGGAAAGAAA+GGG | + | chr5.2:22197672-22197691 | MS.gene027783:intron | 30.0% |
| ! | TTCTGTTGTAATGGAAAGAA+AGG | + | chr5.2:22197671-22197690 | MS.gene027783:intron | 30.0% |
| !! | AAAGAAAGGGATTCAAGTTT+TGG | + | chr5.2:22197685-22197704 | MS.gene027783:intron | 30.0% |
| !! | ATTGTTTTCTGGTAATTACC+AGG | + | chr5.2:22199418-22199437 | MS.gene027783:intron | 30.0% |
| !!! | AAGGCTTTAACTTTTTTGCA+TGG | + | chr5.2:22199605-22199624 | MS.gene027783:intron | 30.0% |
| !!! | AGGCTTTAACTTTTTTGCAT+GGG | + | chr5.2:22199606-22199625 | MS.gene027783:intron | 30.0% |
| AACATATTCTGGACAGATGT+GGG | - | chr5.2:22197910-22197929 | None:intergenic | 35.0% | |
| AACATGGGAAATGGAAATGT+TGG | + | chr5.2:22196880-22196899 | MS.gene027783:CDS | 35.0% | |
| AAGGAGAAATCAACAAGCTA+GGG | - | chr5.2:22198134-22198153 | None:intergenic | 35.0% | |
| AATCAGAGACTCATATTGGA+CGG | + | chr5.2:22196356-22196375 | MS.gene027783:CDS | 35.0% | |
| ACGAAATCAGAGACTCATAT+TGG | + | chr5.2:22196352-22196371 | MS.gene027783:CDS | 35.0% | |
| AGTAGCAATAACATGGGAAA+TGG | + | chr5.2:22196871-22196890 | MS.gene027783:CDS | 35.0% | |
| ATATGAGTCTCTGATTTCGT+CGG | - | chr5.2:22196352-22196371 | None:intergenic | 35.0% | |
| ATGCTAATGTTCGATATGCT+TGG | + | chr5.2:22197115-22197134 | MS.gene027783:CDS | 35.0% | |
| ATTAAACCTGGCAAAAGGAA+AGG | - | chr5.2:22197253-22197272 | None:intergenic | 35.0% | |
| CCATATTCCCCATTATTACA+CGG | - | chr5.2:22197773-22197792 | None:intergenic | 35.0% | |
| CTAGATATGCAGGCATAATT+AGG | + | chr5.2:22198723-22198742 | MS.gene027783:intron | 35.0% | |
| CTATCAAAATGGTGAATGGA+AGG | + | chr5.2:22196438-22196457 | MS.gene027783:CDS | 35.0% | |
| CTATCTACTATGATGAAGTG+TGG | + | chr5.2:22197159-22197178 | MS.gene027783:CDS | 35.0% | |
| GAAACAAGTTTCCAAAAGGA+AGG | - | chr5.2:22198253-22198272 | None:intergenic | 35.0% | |
| GTACTTGATGAGTTAATCAG+AGG | + | chr5.2:22198056-22198075 | MS.gene027783:intron | 35.0% | |
| TAAGCAATCTAGGTTTCAGT+CGG | + | chr5.2:22199021-22199040 | MS.gene027783:intron | 35.0% | |
| TATTGATGCTCTCAGAAACA+AGG | + | chr5.2:22199274-22199293 | MS.gene027783:CDS | 35.0% | |
| TCTACATCTAAATGCACACA+TGG | + | chr5.2:22197201-22197220 | MS.gene027783:CDS | 35.0% | |
| TGAATGGTTTATCTGCTACA+TGG | + | chr5.2:22199636-22199655 | MS.gene027783:intron | 35.0% | |
| TGGTCTATCAAAATGGTGAA+TGG | + | chr5.2:22196434-22196453 | MS.gene027783:CDS | 35.0% | |
| TGTATATGGAAGGTTGGATT+TGG | + | chr5.2:22196945-22196964 | MS.gene027783:CDS | 35.0% | |
| TGTTTGACAACTTCGTTTCT+TGG | - | chr5.2:22196301-22196320 | None:intergenic | 35.0% | |
| ! | ATGATTTTGCGAAGAAGTTG+AGG | + | chr5.2:22199513-22199532 | MS.gene027783:CDS | 35.0% |
| ! | CAAGTGACTGCATTGATAAA+AGG | + | chr5.2:22198797-22198816 | MS.gene027783:intron | 35.0% |
| ! | CGTTTGATGGTCTATCAAAA+TGG | + | chr5.2:22196427-22196446 | MS.gene027783:CDS | 35.0% |
| ! | CTTAAGGGAACTAGTAGTTT+TGG | + | chr5.2:22196988-22197007 | MS.gene027783:CDS | 35.0% |
| ! | CTTTTATCAATGCAGTCACT+TGG | - | chr5.2:22198799-22198818 | None:intergenic | 35.0% |
| ! | GACTGCATTGATAAAAGGAA+TGG | + | chr5.2:22198802-22198821 | MS.gene027783:intron | 35.0% |
| ! | GTCTTTTGCCGTGTAATAAT+GGG | + | chr5.2:22197762-22197781 | MS.gene027783:CDS | 35.0% |
| ! | TCTGAACGTGACAAGATTTT+AGG | - | chr5.2:22198373-22198392 | None:intergenic | 35.0% |
| ! | TCTTTTGCCGTGTAATAATG+GGG | + | chr5.2:22197763-22197782 | MS.gene027783:CDS | 35.0% |
| ! | TGCATTGATAAAAGGAATGG+TGG | + | chr5.2:22198805-22198824 | MS.gene027783:intron | 35.0% |
| !! | AAGCAAGGTACTTTTCTCAA+AGG | + | chr5.2:22199586-22199605 | MS.gene027783:intron | 35.0% |
| !! | AGAAAAGTACCTTGCTTTGA+AGG | - | chr5.2:22199583-22199602 | None:intergenic | 35.0% |
| !! | AGAATGTTGTTGACTTGGTT+AGG | + | chr5.2:22196470-22196489 | MS.gene027783:CDS | 35.0% |
| !! | ATGATTCGGTTCATTCCATT+TGG | + | chr5.2:22198094-22198113 | MS.gene027783:intron | 35.0% |
| !! | CAGATAAGTTCTAGATATGC+AGG | + | chr5.2:22198713-22198732 | MS.gene027783:intron | 35.0% |
| !! | TAGTGTAAAACTAGCTTTGC+TGG | + | chr5.2:22199352-22199371 | MS.gene027783:intron | 35.0% |
| !!! | GTGACAAGATTTTAGGACTT+CGG | - | chr5.2:22198366-22198385 | None:intergenic | 35.0% |
| ACCAAGTCAACAACATTCTG+AGG | - | chr5.2:22196469-22196488 | None:intergenic | 40.0% | |
| ACCATCTCGTGTGATCAAAA+TGG | + | chr5.2:22199713-22199732 | MS.gene027783:CDS | 40.0% | |
| ACTATCATAGTCACCACTAC+TGG | - | chr5.2:22197829-22197848 | None:intergenic | 40.0% | |
| AGTAGTGGTGACTATGATAG+TGG | + | chr5.2:22197828-22197847 | MS.gene027783:CDS | 40.0% | |
| CAACATATTCTGGACAGATG+TGG | - | chr5.2:22197911-22197930 | None:intergenic | 40.0% | |
| CTATCATAGTCACCACTACT+GGG | - | chr5.2:22197828-22197847 | None:intergenic | 40.0% | |
| CTCTTGAGAGCTACAATAGT+TGG | + | chr5.2:22199557-22199576 | MS.gene027783:CDS | 40.0% | |
| CTGGTAATTACCAGGCAAAA+AGG | + | chr5.2:22199426-22199445 | MS.gene027783:intron | 40.0% | |
| GAAGGAGAAATCAACAAGCT+AGG | - | chr5.2:22198135-22198154 | None:intergenic | 40.0% | |
| GATAGACCATCAAACGTTCT+GGG | - | chr5.2:22196423-22196442 | None:intergenic | 40.0% | |
| GCATCAATAAGCACAGGAAA+AGG | - | chr5.2:22199263-22199282 | None:intergenic | 40.0% | |
| GTAGCAGATAAACCATTCAC+TGG | - | chr5.2:22199635-22199654 | None:intergenic | 40.0% | |
| GTAGTGCAGTTGTATATGGA+AGG | + | chr5.2:22196935-22196954 | MS.gene027783:CDS | 40.0% | |
| GTAGTGGTGACTATGATAGT+GGG | + | chr5.2:22197829-22197848 | MS.gene027783:CDS | 40.0% | |
| GTTCATTCCATTTGGATGGA+GGG | + | chr5.2:22198102-22198121 | MS.gene027783:intron | 40.0% | |
| TAATGCGAAGAAAGCAACTG+TGG | + | chr5.2:22196501-22196520 | MS.gene027783:CDS | 40.0% | |
| TACAGTGATGCAATCACGAT+TGG | + | chr5.2:22197047-22197066 | MS.gene027783:CDS | 40.0% | |
| TCTAAATGCACACATGGCTT+TGG | + | chr5.2:22197207-22197226 | MS.gene027783:CDS | 40.0% | |
| TCTCGTCAATCCAAGCAATA+GGG | - | chr5.2:22196606-22196625 | None:intergenic | 40.0% | |
| TGATAGACCATCAAACGTTC+TGG | - | chr5.2:22196424-22196443 | None:intergenic | 40.0% | |
| TGCAGTTGTATATGGAAGGT+TGG | + | chr5.2:22196939-22196958 | MS.gene027783:CDS | 40.0% | |
| TGCATCACTGTACTTGAGAA+GGG | - | chr5.2:22197039-22197058 | None:intergenic | 40.0% | |
| TTCGGTTCATTCCATTTGGA+TGG | + | chr5.2:22198098-22198117 | MS.gene027783:intron | 40.0% | |
| TTGACAGATCACTTCATGTC+TGG | + | chr5.2:22198182-22198201 | MS.gene027783:intron | 40.0% | |
| TTGCATCACTGTACTTGAGA+AGG | - | chr5.2:22197040-22197059 | None:intergenic | 40.0% | |
| TTTGATCACACGAGATGGTT+GGG | - | chr5.2:22199712-22199731 | None:intergenic | 40.0% | |
| ! | CCGTGTAATAATGGGGAATA+TGG | + | chr5.2:22197770-22197789 | MS.gene027783:CDS | 40.0% |
| ! | GGTCTTTTGCCGTGTAATAA+TGG | + | chr5.2:22197761-22197780 | MS.gene027783:CDS | 40.0% |
| ! | GTTGATTTCTCCTTCTGGTT+GGG | + | chr5.2:22198140-22198159 | MS.gene027783:intron | 40.0% |
| ! | TAGTGGTGACTATGATAGTG+GGG | + | chr5.2:22197830-22197849 | MS.gene027783:CDS | 40.0% |
| ! | TCCTCAGAATGTTGTTGACT+TGG | + | chr5.2:22196465-22196484 | MS.gene027783:CDS | 40.0% |
| ! | TGCAGGCATAATTAGGGTTT+TGG | + | chr5.2:22198730-22198749 | MS.gene027783:intron | 40.0% |
| ! | TTTTGATCACACGAGATGGT+TGG | - | chr5.2:22199713-22199732 | None:intergenic | 40.0% |
| !! | AATAGTTGGCCTTCAAAGCA+AGG | + | chr5.2:22199571-22199590 | MS.gene027783:CDS | 40.0% |
| !! | AGCTTGTTGATTTCTCCTTC+TGG | + | chr5.2:22198135-22198154 | MS.gene027783:intron | 40.0% |
| !! | AGGCATAATTAGGGTTTTGG+AGG | + | chr5.2:22198733-22198752 | MS.gene027783:intron | 40.0% |
| !! | GTTGGTAGTGCAGTTGTATA+TGG | + | chr5.2:22196931-22196950 | MS.gene027783:CDS | 40.0% |
| !! | TCCATTTTGATCACACGAGA+TGG | - | chr5.2:22199717-22199736 | None:intergenic | 40.0% |
| !! | TGTTGATTTCTCCTTCTGGT+TGG | + | chr5.2:22198139-22198158 | MS.gene027783:intron | 40.0% |
| !! | TTGAATTCTGGGATACCTCA+GGG | + | chr5.2:22199194-22199213 | MS.gene027783:intron | 40.0% |
| !! | TTTGAATTCTGGGATACCTC+AGG | + | chr5.2:22199193-22199212 | MS.gene027783:intron | 40.0% |
| !!! | CTGACTCATCTTGGTTTTGA+AGG | + | chr5.2:22198975-22198994 | MS.gene027783:intron | 40.0% |
| ACTATGATGAAGTGTGGGCT+TGG | + | chr5.2:22197165-22197184 | MS.gene027783:CDS | 45.0% | |
| ACTGTGGAGGTAGAGTTACA+TGG | + | chr5.2:22196517-22196536 | MS.gene027783:CDS | 45.0% | |
| ATACCTCAGGGAATAGCATC+TGG | + | chr5.2:22199206-22199225 | MS.gene027783:intron | 45.0% | |
| ATTGCTTGGATTGACGAGAC+AGG | + | chr5.2:22196607-22196626 | MS.gene027783:CDS | 45.0% | |
| CAAGGTTTCTGCGAAGGATA+TGG | + | chr5.2:22199292-22199311 | MS.gene027783:CDS | 45.0% | |
| CAGAAACAAGGTTTCTGCGA+AGG | + | chr5.2:22199286-22199305 | MS.gene027783:CDS | 45.0% | |
| CCACATGCTACATGTCCAAA+CGG | + | chr5.2:22196232-22196251 | MS.gene027783:CDS | 45.0% | |
| GACTCATATTGGACGGTCAT+TGG | + | chr5.2:22196363-22196382 | MS.gene027783:CDS | 45.0% | |
| GATGAAACCCTCCATCCAAA+TGG | - | chr5.2:22198112-22198131 | None:intergenic | 45.0% | |
| GCATCACTGTACTTGAGAAG+GGG | - | chr5.2:22197038-22197057 | None:intergenic | 45.0% | |
| GGGTTGTGCTTAATCTGAAG+CGG | + | chr5.2:22196197-22196216 | MS.gene027783:CDS | 45.0% | |
| GGTTCATTCCATTTGGATGG+AGG | + | chr5.2:22198101-22198120 | MS.gene027783:intron | 45.0% | |
| GTCTCGTCAATCCAAGCAAT+AGG | - | chr5.2:22196607-22196626 | None:intergenic | 45.0% | |
| TCCTGATTGCAGGGATCATA+AGG | - | chr5.2:22196676-22196695 | None:intergenic | 45.0% | |
| TCTCCACTATCCTGATTGCA+GGG | - | chr5.2:22196685-22196704 | None:intergenic | 45.0% | |
| TTCTCCACTATCCTGATTGC+AGG | - | chr5.2:22196686-22196705 | None:intergenic | 45.0% | |
| TTGCTTGGATTGACGAGACA+GGG | + | chr5.2:22196608-22196627 | MS.gene027783:CDS | 45.0% | |
| ! | CAAAGGAAATTTGGCATCGG+AGG | - | chr5.2:22198442-22198461 | None:intergenic | 45.0% |
| !! | AAAGGCATTGAAGGGGATGT+TGG | - | chr5.2:22199245-22199264 | None:intergenic | 45.0% |
| !! | AGCACAGGAAAAGGCATTGA+AGG | - | chr5.2:22199254-22199273 | None:intergenic | 45.0% |
| !! | CACAGGAAAAGGCATTGAAG+GGG | - | chr5.2:22199252-22199271 | None:intergenic | 45.0% |
| !! | CTGAGAGCATCAATAAGCAC+AGG | - | chr5.2:22199269-22199288 | None:intergenic | 45.0% |
| !! | GCACAGGAAAAGGCATTGAA+GGG | - | chr5.2:22199253-22199272 | None:intergenic | 45.0% |
| !! | GCTTGGCTTGCTTCTTCTAA+AGG | + | chr5.2:22197132-22197151 | MS.gene027783:CDS | 45.0% |
| !! | TCAGGATAGTGGAGAAAGTC+AGG | + | chr5.2:22196690-22196709 | MS.gene027783:CDS | 45.0% |
| AAGGTCTCTTCTGCTGCTGA+AGG | + | chr5.2:22197939-22197958 | MS.gene027783:CDS | 50.0% | |
| AATATGGAGCTTCTCCGTCC+TGG | + | chr5.2:22197786-22197805 | MS.gene027783:CDS | 50.0% | |
| AGACAGTTTCGTCCCAGTAG+TGG | + | chr5.2:22197813-22197832 | MS.gene027783:CDS | 50.0% | |
| ATCACACGAGATGGTTGGGA+GGG | - | chr5.2:22199708-22199727 | None:intergenic | 50.0% | |
| CCGTTTGGACATGTAGCATG+TGG | - | chr5.2:22196235-22196254 | None:intergenic | 50.0% | |
| CGAAAATGGGGTTCGACACT+TGG | + | chr5.2:22197740-22197759 | MS.gene027783:CDS | 50.0% | |
| GAAACTGTCTAGTGCCAGGA+CGG | - | chr5.2:22197803-22197822 | None:intergenic | 50.0% | |
| GAACCAGATGCTATTCCCTG+AGG | - | chr5.2:22199212-22199231 | None:intergenic | 50.0% | |
| GAGTCGATGCTTCCAAGTTG+GGG | + | chr5.2:22196770-22196789 | MS.gene027783:CDS | 50.0% | |
| GATACAAGTGATGCCCAACG+AGG | - | chr5.2:22196277-22196296 | None:intergenic | 50.0% | |
| GATCCCTGCAATCAGGATAG+TGG | + | chr5.2:22196679-22196698 | MS.gene027783:CDS | 50.0% | |
| GCCTTATGATCCCTGCAATC+AGG | + | chr5.2:22196672-22196691 | MS.gene027783:CDS | 50.0% | |
| GGAGTCGATGCTTCCAAGTT+GGG | + | chr5.2:22196769-22196788 | MS.gene027783:CDS | 50.0% | |
| TGCGAAGAAAGCAACTGTGG+AGG | + | chr5.2:22196504-22196523 | MS.gene027783:CDS | 50.0% | |
| TGGAGTCGATGCTTCCAAGT+TGG | + | chr5.2:22196768-22196787 | MS.gene027783:CDS | 50.0% | |
| TTGCATGGGACTCCAGTGAA+TGG | + | chr5.2:22199620-22199639 | MS.gene027783:intron | 50.0% | |
| ! | AAGTGTGGGCTTGGTCATTG+TGG | + | chr5.2:22197174-22197193 | MS.gene027783:CDS | 50.0% |
| ! | AGCGAGTCATCCTTTTTGCC+TGG | - | chr5.2:22199439-22199458 | None:intergenic | 50.0% |
| ! | AGTCGATGCTTCCAAGTTGG+GGG | + | chr5.2:22196771-22196790 | MS.gene027783:CDS | 50.0% |
| ! | ATAGCATCTGGTTCGCGTAG+AGG | + | chr5.2:22199218-22199237 | MS.gene027783:CDS | 50.0% |
| ! | CACGAGTCATCCTTTTTGCC+TGG | - | chr5.2:22199493-22199512 | None:intergenic | 50.0% |
| ! | CTGCTACCTTTCCTTTTGCC+AGG | + | chr5.2:22197244-22197263 | MS.gene027783:CDS | 50.0% |
| ! | GGCAAACAACGGAAAGGCAT+CGG | + | chr5.2:22196171-22196190 | MS.gene027783:CDS | 50.0% |
| ! | TGTACGAGTGCCCTTCCTTT+TGG | + | chr5.2:22198239-22198258 | MS.gene027783:intron | 50.0% |
| !! | ACAACGGAAAGGCATCGGAT+AGG | + | chr5.2:22196176-22196195 | MS.gene027783:CDS | 50.0% |
| !! | CAACGGAAAGGCATCGGATA+GGG | + | chr5.2:22196177-22196196 | MS.gene027783:CDS | 50.0% |
| !! | TGGTGACTATGATAGTGGGG+TGG | + | chr5.2:22197833-22197852 | MS.gene027783:CDS | 50.0% |
| ACTGGTCGCAGATCTCCGTT+TGG | - | chr5.2:22196250-22196269 | None:intergenic | 55.0% | |
| AGCTCAAGTGCCCAACCAGA+AGG | - | chr5.2:22198153-22198172 | None:intergenic | 55.0% | |
| GATCACACGAGATGGTTGGG+AGG | - | chr5.2:22199709-22199728 | None:intergenic | 55.0% | |
| GATGCCCAACGAGGTAACAC+TGG | - | chr5.2:22196268-22196287 | None:intergenic | 55.0% | |
| GCGACCAGTGTTACCTCGTT+GGG | + | chr5.2:22196261-22196280 | MS.gene027783:CDS | 55.0% | |
| GGACGAAACTGTCTAGTGCC+AGG | - | chr5.2:22197807-22197826 | None:intergenic | 55.0% | |
| GTTTGCAGCGCCCTATTGCT+TGG | + | chr5.2:22196593-22196612 | MS.gene027783:CDS | 55.0% | |
| TGCGACCAGTGTTACCTCGT+TGG | + | chr5.2:22196260-22196279 | MS.gene027783:CDS | 55.0% | |
| TGGACGCCCAGAACGTTTGA+TGG | + | chr5.2:22196414-22196433 | MS.gene027783:CDS | 55.0% | |
| GCACTCGTACAGCTTGGCAG+GGG | - | chr5.2:22198230-22198249 | None:intergenic | 60.0% | |
| GGCACTCGTACAGCTTGGCA+GGG | - | chr5.2:22198231-22198250 | None:intergenic | 60.0% | |
| ! | CAAGTTGGGGGAGTGCACAG+GGG | + | chr5.2:22196783-22196802 | MS.gene027783:CDS | 60.0% |
| ! | CCAAGTTGGGGGAGTGCACA+GGG | + | chr5.2:22196782-22196801 | MS.gene027783:CDS | 60.0% |
| ! | TCCAAGTTGGGGGAGTGCAC+AGG | + | chr5.2:22196781-22196800 | MS.gene027783:CDS | 60.0% |
| !! | GGAAGGGCACTCGTACAGCT+TGG | - | chr5.2:22198236-22198255 | None:intergenic | 60.0% |
| CCCTGTGCACTCCCCCAACT+TGG | - | chr5.2:22196785-22196804 | None:intergenic | 65.0% | |
| GGGCACTCGTACAGCTTGGC+AGG | - | chr5.2:22198232-22198251 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 22196166 | 22199746 | 22196166 | ID=MS.gene027783 |
| chr5.2 | mRNA | 22196166 | 22199746 | 22196166 | ID=MS.gene027783.t1;Parent=MS.gene027783 |
| chr5.2 | exon | 22196166 | 22197265 | 22196166 | ID=MS.gene027783.t1.exon1;Parent=MS.gene027783.t1 |
| chr5.2 | CDS | 22196166 | 22197265 | 22196166 | ID=cds.MS.gene027783.t1;Parent=MS.gene027783.t1 |
| chr5.2 | exon | 22197719 | 22197960 | 22197719 | ID=MS.gene027783.t1.exon2;Parent=MS.gene027783.t1 |
| chr5.2 | CDS | 22197719 | 22197960 | 22197719 | ID=cds.MS.gene027783.t1;Parent=MS.gene027783.t1 |
| chr5.2 | exon | 22198308 | 22198411 | 22198308 | ID=MS.gene027783.t1.exon3;Parent=MS.gene027783.t1 |
| chr5.2 | CDS | 22198308 | 22198411 | 22198308 | ID=cds.MS.gene027783.t1;Parent=MS.gene027783.t1 |
| chr5.2 | exon | 22199215 | 22199346 | 22199215 | ID=MS.gene027783.t1.exon4;Parent=MS.gene027783.t1 |
| chr5.2 | CDS | 22199215 | 22199346 | 22199215 | ID=cds.MS.gene027783.t1;Parent=MS.gene027783.t1 |
| chr5.2 | exon | 22199494 | 22199592 | 22199494 | ID=MS.gene027783.t1.exon5;Parent=MS.gene027783.t1 |
| chr5.2 | CDS | 22199494 | 22199592 | 22199494 | ID=cds.MS.gene027783.t1;Parent=MS.gene027783.t1 |
| chr5.2 | exon | 22199702 | 22199746 | 22199702 | ID=MS.gene027783.t1.exon6;Parent=MS.gene027783.t1 |
| chr5.2 | CDS | 22199702 | 22199746 | 22199702 | ID=cds.MS.gene027783.t1;Parent=MS.gene027783.t1 |
| Gene Sequence |
| Protein sequence |
