Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029308.t1 | XP_013470301.1 | 95.1 | 568 | 28 | 0 | 1 | 568 | 1 | 568 | 0.00E+00 | 1108.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029308.t1 | Q8RY59 | 43.0 | 528 | 269 | 12 | 51 | 562 | 55 | 566 | 4.3e-109 | 396.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029308.t1 | A0A072VQR8 | 95.1 | 568 | 28 | 0 | 1 | 568 | 1 | 568 | 0.0e+00 | 1108.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene069103 | MS.gene029308 | PPI |
| MS.gene79552 | MS.gene029308 | PPI |
| MS.gene36039 | MS.gene029308 | PPI |
| MS.gene029308 | MS.gene001066 | PPI |
| MS.gene029308 | MS.gene046455 | PPI |
| MS.gene046409 | MS.gene029308 | PPI |
| MS.gene027783 | MS.gene029308 | PPI |
| MS.gene34237 | MS.gene029308 | PPI |
| MS.gene070621 | MS.gene029308 | PPI |
| MS.gene76207 | MS.gene029308 | PPI |
| MS.gene001066 | MS.gene029308 | PPI |
| MS.gene007901 | MS.gene029308 | PPI |
| MS.gene057563 | MS.gene029308 | PPI |
| MS.gene74956 | MS.gene029308 | PPI |
| MS.gene021778 | MS.gene029308 | PPI |
| MS.gene046444 | MS.gene029308 | PPI |
| MS.gene070678 | MS.gene029308 | PPI |
| MS.gene029308 | MS.gene069103 | PPI |
| MS.gene046455 | MS.gene029308 | PPI |
| MS.gene032270 | MS.gene029308 | PPI |
| MS.gene065039 | MS.gene029308 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029308.t1 | MTR_1g112330 | 95.070 | 568 | 28 | 0 | 1 | 568 | 1 | 568 | 0.0 | 1133 |
| MS.gene029308.t1 | MTR_1g112330 | 94.718 | 568 | 27 | 1 | 1 | 568 | 1 | 565 | 0.0 | 1123 |
| MS.gene029308.t1 | MTR_1g112330 | 95.604 | 455 | 20 | 0 | 1 | 455 | 1 | 455 | 0.0 | 917 |
| MS.gene029308.t1 | MTR_5g032190 | 76.408 | 568 | 125 | 4 | 1 | 567 | 1 | 560 | 0.0 | 885 |
| MS.gene029308.t1 | MTR_5g032190 | 79.141 | 489 | 95 | 2 | 1 | 489 | 1 | 482 | 0.0 | 797 |
| MS.gene029308.t1 | MTR_5g032190 | 79.296 | 483 | 93 | 2 | 1 | 483 | 1 | 476 | 0.0 | 790 |
| MS.gene029308.t1 | MTR_7g011550 | 45.390 | 564 | 265 | 9 | 1 | 559 | 1 | 526 | 2.26e-152 | 449 |
| MS.gene029308.t1 | MTR_5g029580 | 43.210 | 324 | 174 | 3 | 238 | 559 | 27 | 342 | 3.87e-87 | 275 |
| MS.gene029308.t1 | MTR_4g105740 | 31.788 | 302 | 161 | 8 | 273 | 569 | 46 | 307 | 9.13e-42 | 153 |
| MS.gene029308.t1 | MTR_3g077870 | 30.499 | 341 | 182 | 10 | 223 | 555 | 9 | 302 | 2.86e-41 | 152 |
| MS.gene029308.t1 | MTR_4g105740 | 32.192 | 292 | 153 | 8 | 273 | 559 | 46 | 297 | 5.38e-41 | 150 |
| MS.gene029308.t1 | MTR_8g088250 | 28.814 | 295 | 157 | 8 | 277 | 559 | 26 | 279 | 1.41e-32 | 127 |
| MS.gene029308.t1 | MTR_2g090130 | 41.333 | 150 | 51 | 2 | 278 | 425 | 103 | 217 | 4.52e-28 | 112 |
| MS.gene029308.t1 | MTR_2g090130 | 62.295 | 61 | 23 | 0 | 101 | 161 | 43 | 103 | 6.08e-21 | 92.0 |
| MS.gene029308.t1 | MTR_7g011640 | 45.455 | 110 | 41 | 2 | 101 | 210 | 15 | 105 | 5.76e-22 | 92.8 |
| MS.gene029308.t1 | MTR_7g011880 | 33.333 | 165 | 78 | 3 | 374 | 538 | 54 | 186 | 4.42e-20 | 89.0 |
| MS.gene029308.t1 | MTR_7g061850 | 39.583 | 96 | 56 | 1 | 239 | 332 | 28 | 123 | 1.43e-15 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029308.t1 | AT1G32230 | 43.074 | 527 | 269 | 11 | 51 | 562 | 55 | 565 | 6.81e-135 | 405 |
| MS.gene029308.t1 | AT1G32230 | 43.074 | 527 | 269 | 11 | 51 | 562 | 55 | 565 | 1.98e-134 | 404 |
| MS.gene029308.t1 | AT1G32230 | 43.074 | 527 | 269 | 11 | 51 | 562 | 55 | 565 | 1.98e-134 | 404 |
| MS.gene029308.t1 | AT1G32230 | 43.074 | 527 | 269 | 11 | 51 | 562 | 55 | 565 | 1.98e-134 | 404 |
| MS.gene029308.t1 | AT1G32230 | 43.074 | 527 | 269 | 11 | 51 | 562 | 55 | 565 | 1.98e-134 | 404 |
| MS.gene029308.t1 | AT1G32230 | 42.992 | 528 | 269 | 11 | 51 | 562 | 55 | 566 | 3.05e-134 | 404 |
| MS.gene029308.t1 | AT2G35510 | 39.212 | 584 | 312 | 13 | 1 | 562 | 1 | 563 | 8.46e-121 | 368 |
| MS.gene029308.t1 | AT2G35510 | 39.212 | 584 | 312 | 13 | 1 | 562 | 1 | 563 | 8.46e-121 | 368 |
| MS.gene029308.t1 | AT2G35510 | 40.605 | 463 | 255 | 9 | 1 | 455 | 1 | 451 | 3.83e-107 | 329 |
| MS.gene029308.t1 | AT1G23550 | 31.142 | 289 | 155 | 6 | 275 | 555 | 56 | 308 | 2.05e-40 | 149 |
| MS.gene029308.t1 | AT1G70440 | 27.761 | 335 | 191 | 7 | 236 | 559 | 6 | 300 | 1.09e-36 | 139 |
| MS.gene029308.t1 | AT1G70440 | 27.761 | 335 | 191 | 7 | 236 | 559 | 6 | 300 | 1.09e-36 | 139 |
| MS.gene029308.t1 | AT5G62520 | 26.190 | 252 | 138 | 4 | 308 | 555 | 89 | 296 | 4.46e-26 | 109 |
| MS.gene029308.t1 | AT5G62520 | 32.877 | 146 | 89 | 3 | 308 | 449 | 89 | 229 | 1.84e-21 | 94.4 |
| MS.gene029308.t1 | AT3G47720 | 24.723 | 271 | 142 | 7 | 305 | 564 | 91 | 310 | 5.25e-20 | 91.7 |
Find 125 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTGCGATGTTGACGAAAA+TGG | 0.184170 | 1.4:-86313992 | MS.gene029308:CDS |
| AATGAAATTAAATTACATTT+AGG | 0.198704 | 1.4:-86314993 | MS.gene029308:CDS |
| ATCAATTTGAACATGCTTAA+AGG | 0.213131 | 1.4:+86314908 | None:intergenic |
| TCGGAAGCAGCATAAATTTC+AGG | 0.217736 | 1.4:+86315083 | None:intergenic |
| CATTTAGGAATTGAAATAAA+TGG | 0.231625 | 1.4:-86314978 | MS.gene029308:CDS |
| TTCAAAATCATTATGATTGC+AGG | 0.266216 | 1.4:+86314875 | None:intergenic |
| GCATATAATGAAATTGTATA+TGG | 0.291709 | 1.4:-86314774 | MS.gene029308:CDS |
| TTGAAACTAATAACAAATTC+TGG | 0.295864 | 1.4:+86313800 | None:intergenic |
| TCCACAGGATGCTGTTGATT+TGG | 0.304882 | 1.4:-86315261 | MS.gene029308:CDS |
| TGATAGACCATCAAACGTTC+TGG | 0.312618 | 1.4:+86315305 | None:intergenic |
| TGTATATGGAAAGTTGGATT+TGG | 0.313935 | 1.4:-86314760 | MS.gene029308:CDS |
| CCGTGTAATAATGGGGAATA+TGG | 0.323010 | 1.4:-86313948 | MS.gene029308:CDS |
| TGTGCAAAAGATGTTTCTTA+AGG | 0.323221 | 1.4:-86314733 | MS.gene029308:CDS |
| ATTATGATTGCAGGCTTGTT+TGG | 0.340052 | 1.4:+86314884 | None:intergenic |
| AAATGTAATTTAATTTCATT+AGG | 0.344899 | 1.4:+86314996 | None:intergenic |
| TGTTTGACAACCTTGTTTCT+TGG | 0.346772 | 1.4:+86315428 | None:intergenic |
| ATATGTACCATCTGCACTTC+AGG | 0.348991 | 1.4:-86312968 | MS.gene029308:CDS |
| GTGCAAAAGATGTTTCTTAA+GGG | 0.359591 | 1.4:-86314732 | MS.gene029308:CDS |
| TATCAGATGAATTTGAAATC+TGG | 0.365305 | 1.4:-86315155 | MS.gene029308:CDS |
| ATATGACTCTCTGATTTCAT+TGG | 0.368978 | 1.4:+86315377 | None:intergenic |
| CGAGGGGATGTTGAAGCTTC+AGG | 0.375057 | 1.4:+86313059 | None:intergenic |
| AGAATTTGTTATTAGTTTCA+AGG | 0.376305 | 1.4:-86313798 | MS.gene029308:CDS |
| CTTAAGGGAACTGGTAGTTT+TGG | 0.384074 | 1.4:-86314717 | MS.gene029308:CDS |
| TGAAATTGTATATGGAAAGT+TGG | 0.390031 | 1.4:-86314766 | MS.gene029308:CDS |
| CGTTTGATGGTCTATCAAAA+TGG | 0.393202 | 1.4:-86315299 | MS.gene029308:CDS |
| ATTGCGATGTTGACGAAAAT+GGG | 0.394816 | 1.4:-86313991 | MS.gene029308:CDS |
| CATAGTAGGTAACTCTCCTT+TGG | 0.401981 | 1.4:+86314557 | None:intergenic |
| ACAATGGAAAGGCGTCTAAC+AGG | 0.409948 | 1.4:-86315550 | MS.gene029308:CDS |
| GGAGTAGGTGCATCCAAGTT+GGG | 0.410633 | 1.4:-86314957 | MS.gene029308:CDS |
| ATGAAATCAGAGAGTCATAT+TGG | 0.412100 | 1.4:-86315374 | MS.gene029308:CDS |
| GTTGAGCAAAATAAAAGTAT+AGG | 0.412784 | 1.4:-86314804 | MS.gene029308:CDS |
| AGCAGTAATAACATGGGAAA+TGG | 0.415932 | 1.4:-86314843 | MS.gene029308:CDS |
| AAGATGTTTCTTAAGGGAAC+TGG | 0.416920 | 1.4:-86314726 | MS.gene029308:CDS |
| GCCTTATGATCTCTGCAATC+AGG | 0.430030 | 1.4:-86315054 | MS.gene029308:CDS |
| GATAGACCATCAAACGTTCT+GGG | 0.444240 | 1.4:+86315306 | None:intergenic |
| TCCTGATTGCAGAGATCATA+AGG | 0.444505 | 1.4:+86315053 | None:intergenic |
| TACCTACTATGATGAATTGT+GGG | 0.444859 | 1.4:-86314545 | MS.gene029308:CDS |
| TACATCGGTGCAGTCGCGAT+TGG | 0.445376 | 1.4:-86314658 | MS.gene029308:CDS |
| ATTTAATTTCATTAGGACCT+TGG | 0.447429 | 1.4:+86315003 | None:intergenic |
| ATTTATGCTGCTTCCGATGA+AGG | 0.448045 | 1.4:-86315077 | MS.gene029308:CDS |
| TTAAGATTTAACTATTGTGC+TGG | 0.452841 | 1.4:+86312286 | None:intergenic |
| GTTTGCAACAACCTATTGCT+TGG | 0.460581 | 1.4:-86315133 | MS.gene029308:CDS |
| AGGATGCTGTTGATTTGGTT+AGG | 0.460743 | 1.4:-86315256 | MS.gene029308:CDS |
| TGAAGTGCAGATGGTACATA+TGG | 0.467187 | 1.4:+86312970 | None:intergenic |
| CGGAAGCCCAGAACGTTTGA+TGG | 0.469515 | 1.4:-86315312 | MS.gene029308:CDS |
| TAGAAATTCAACCTGGCAAA+AGG | 0.470103 | 1.4:+86314450 | None:intergenic |
| TGCAATCAGGACAGCAGAAA+AGG | 0.471869 | 1.4:-86315041 | MS.gene029308:CDS |
| GTCAAACATATGAGATTGAA+AGG | 0.473888 | 1.4:-86315413 | MS.gene029308:CDS |
| GTCTCATCAATCCAAGCAAT+AGG | 0.480763 | 1.4:+86315122 | None:intergenic |
| CTCTTGCGAGCTACATTACC+TGG | 0.482989 | 1.4:-86312793 | MS.gene029308:CDS |
| ATATTGGACGATCGTTGGTT+AGG | 0.486121 | 1.4:-86315358 | MS.gene029308:CDS |
| ACTATCATAGTCACTACTAC+TGG | 0.487570 | 1.4:+86313892 | None:intergenic |
| ATGCTAATGTTCGATATGCT+TGG | 0.490597 | 1.4:-86314590 | MS.gene029308:CDS |
| CGGAAGCAGCATAAATTTCA+GGG | 0.494199 | 1.4:+86315084 | None:intergenic |
| AGTAGTAGTGACTATGATAG+TGG | 0.498552 | 1.4:-86313890 | MS.gene029308:CDS |
| AATATGGAGCTTCTCCATCC+TGG | 0.503567 | 1.4:-86313932 | MS.gene029308:CDS |
| GCTTGGCTTGCTTCTTCCAA+AGG | 0.505689 | 1.4:-86314573 | MS.gene029308:CDS |
| TGGAGTAGGTGCATCCAAGT+TGG | 0.506701 | 1.4:-86314958 | MS.gene029308:CDS |
| ATACCTCAGGGAATTCCAAC+TGG | 0.510962 | 1.4:-86313086 | MS.gene029308:intron |
| TATGTACCATCTGCACTTCA+GGG | 0.512959 | 1.4:-86312967 | MS.gene029308:intron |
| GCTGTGGAGGTAGAGTTAAA+TGG | 0.513139 | 1.4:-86315209 | MS.gene029308:CDS |
| GGAATTGAAATAAATGGAGT+AGG | 0.514253 | 1.4:-86314972 | MS.gene029308:CDS |
| AACATGGGAAATGGAAGTGT+TGG | 0.515790 | 1.4:-86314834 | MS.gene029308:CDS |
| AACATGCTTAAAGGTGACAT+TGG | 0.523449 | 1.4:+86314917 | None:intergenic |
| GGTCATGAATCTTTGTTCCA+AGG | 0.527808 | 1.4:-86315020 | MS.gene029308:CDS |
| AAAAGTCCAGCACAAGATGA+TGG | 0.528460 | 1.4:+86315186 | None:intergenic |
| TCCACTCACATCCCAAAAGA+AGG | 0.531626 | 1.4:+86313428 | None:intergenic |
| TAACAAATTCTGGATAGATG+TGG | 0.531780 | 1.4:+86313810 | None:intergenic |
| GGGGTTAATTCAGCTAGCCA+TGG | 0.534332 | 1.4:-86313391 | MS.gene029308:CDS |
| ACTATGATGAATTGTGGGCT+TGG | 0.536837 | 1.4:-86314540 | MS.gene029308:CDS |
| ATTCAACCTGGCAAAAGGAC+AGG | 0.542093 | 1.4:+86314455 | None:intergenic |
| ATAAGTTTCATATCCTCTGC+AGG | 0.543701 | 1.4:+86312993 | None:intergenic |
| GATGTACATTGAGGTAATAC+TGG | 0.544556 | 1.4:+86315461 | None:intergenic |
| CTATCAAAATGGTGGATGGA+AGG | 0.546660 | 1.4:-86315288 | MS.gene029308:CDS |
| GTAGTAGTGACTATGATAGT+GGG | 0.547301 | 1.4:-86313889 | MS.gene029308:CDS |
| GGACGGTACTGTCTAGTGCC+AGG | 0.550759 | 1.4:+86313914 | None:intergenic |
| AACAAATTCTGGATAGATGT+GGG | 0.554025 | 1.4:+86313811 | None:intergenic |
| AAATGGCCATCATCTTGTGC+TGG | 0.555550 | 1.4:-86315192 | MS.gene029308:CDS |
| CTATCATAGTCACTACTACT+GGG | 0.559417 | 1.4:+86313893 | None:intergenic |
| CTGCACCGATGTACTTGAGA+AGG | 0.562181 | 1.4:+86314668 | None:intergenic |
| GAGTAGGTGCATCCAAGTTG+GGG | 0.564548 | 1.4:-86314956 | MS.gene029308:CDS |
| AGCCCACAATTCATCATAGT+AGG | 0.565165 | 1.4:+86314543 | None:intergenic |
| TTTATGCTGCTTCCGATGAA+GGG | 0.565221 | 1.4:-86315076 | MS.gene029308:CDS |
| TTACCTACTATGATGAATTG+TGG | 0.569110 | 1.4:-86314546 | MS.gene029308:CDS |
| AAGGTCTCTTCTGATGCTGA+AGG | 0.569414 | 1.4:-86313779 | MS.gene029308:intron |
| ATTGCTTGGATTGATGAGAC+AGG | 0.571658 | 1.4:-86315119 | MS.gene029308:CDS |
| TGAAGATAGCAGTAATAACA+TGG | 0.572879 | 1.4:-86314850 | MS.gene029308:CDS |
| CGTTCAGAGTCTTCGAGAGT+AGG | 0.575834 | 1.4:-86313352 | MS.gene029308:CDS |
| TCTAAATGCATGCATGGCAT+TGG | 0.576632 | 1.4:-86314498 | MS.gene029308:CDS |
| TGCACCGATGTACTTGAGAA+GGG | 0.577902 | 1.4:+86314669 | None:intergenic |
| ACCTTGTGTTGAAGAAGACC+AGG | 0.580336 | 1.4:+86312775 | None:intergenic |
| CATAAACAAGGTTCCTGCAG+AGG | 0.585357 | 1.4:-86313006 | MS.gene029308:CDS |
| CCATATTCCCCATTATTACA+CGG | 0.586757 | 1.4:+86313948 | None:intergenic |
| TCTGCATCTAAATGCATGCA+TGG | 0.588450 | 1.4:-86314504 | MS.gene029308:CDS |
| CTGAAGCTTCAACATCCCCT+CGG | 0.589448 | 1.4:-86313058 | MS.gene029308:CDS |
| GGTACTGTCTAGTGCCAGGA+TGG | 0.592202 | 1.4:+86313918 | None:intergenic |
| TCAAACATATGAGATTGAAA+GGG | 0.594105 | 1.4:-86315412 | MS.gene029308:CDS |
| TACATACCCTGAAGTGCAGA+TGG | 0.595712 | 1.4:+86312961 | None:intergenic |
| GAGATCATAAGGCCCTTCAT+CGG | 0.599029 | 1.4:+86315064 | None:intergenic |
| GAAGCTTCAGGCGAACCAGT+TGG | 0.600300 | 1.4:+86313071 | None:intergenic |
| TGGTCTATCAAAATGGTGGA+TGG | 0.608244 | 1.4:-86315292 | MS.gene029308:CDS |
| TATATGAATTATAAGAAGAG+CGG | 0.609096 | 1.4:-86315332 | MS.gene029308:CDS |
| TGATGTAAAGAAAGCAGCTG+TGG | 0.610026 | 1.4:-86315225 | MS.gene029308:CDS |
| GAGTCATATTGGACGATCGT+TGG | 0.611529 | 1.4:-86315363 | MS.gene029308:CDS |
| ACCTGGTCTTCTTCAACACA+AGG | 0.612227 | 1.4:-86312776 | MS.gene029308:intron |
| TTGCGATGTTGACGAAAATG+GGG | 0.614839 | 1.4:-86313990 | MS.gene029308:CDS |
| ACTAATAACACCAAGAAACA+AGG | 0.615567 | 1.4:-86315438 | MS.gene029308:CDS |
| ATAAACATGGAAGCAAACAA+TGG | 0.615926 | 1.4:-86315566 | None:intergenic |
| GGAATGTGCTTAATCTGAAG+CGG | 0.619402 | 1.4:-86315529 | MS.gene029308:CDS |
| TGTAAAGAAAGCAGCTGTGG+AGG | 0.623964 | 1.4:-86315222 | MS.gene029308:CDS |
| TGGATGGAAGGACTTTCCAC+AGG | 0.627657 | 1.4:-86315276 | MS.gene029308:CDS |
| CATGGAAGCAAACAATGGAA+AGG | 0.628372 | 1.4:-86315561 | MS.gene029308:CDS |
| CATAGTCACTACTACTGGGA+CGG | 0.629627 | 1.4:+86313897 | None:intergenic |
| ACCAAATCAACAGCATCCTG+TGG | 0.639973 | 1.4:+86315260 | None:intergenic |
| GAAGATAGCAGTAATAACAT+GGG | 0.640382 | 1.4:-86314849 | MS.gene029308:CDS |
| GTTATTAGTGATGTACATTG+AGG | 0.640455 | 1.4:+86315452 | None:intergenic |
| TTACCCCTTCTCAAGTACAT+CGG | 0.645983 | 1.4:-86314673 | MS.gene029308:CDS |
| GCACCGATGTACTTGAGAAG+GGG | 0.647364 | 1.4:+86314670 | None:intergenic |
| TGCATGCATTTAGATGCAGA+TGG | 0.653425 | 1.4:+86314507 | None:intergenic |
| TTGCTTGGATTGATGAGACA+GGG | 0.654779 | 1.4:-86315118 | MS.gene029308:CDS |
| TAGTGACTATGATAGTGGGG+TGG | 0.665276 | 1.4:-86313885 | MS.gene029308:CDS |
| TTGATGGTCTATCAAAATGG+TGG | 0.667750 | 1.4:-86315296 | MS.gene029308:CDS |
| TAGTAGTGACTATGATAGTG+GGG | 0.676289 | 1.4:-86313888 | MS.gene029308:CDS |
| AGTAGGTGCATCCAAGTTGG+GGG | 0.717707 | 1.4:-86314955 | MS.gene029308:CDS |
| ACTCTCGAAGACTCTGAACG+TGG | 0.722742 | 1.4:+86313355 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAAATTAAATTACATTT+AGG | - | chr1.4:86312864-86312883 | MS.gene029308:intron | 10.0% |
| !!! | AAATGTAATTTAATTTCATT+AGG | + | chr1.4:86312864-86312883 | None:intergenic | 10.0% |
| !! | CCATTCTTAAATAAAATAAT+TGG | + | chr1.4:86313564-86313583 | None:intergenic | 15.0% |
| !! | CTTATTATAATATTGGTATA+TGG | - | chr1.4:86314188-86314207 | MS.gene029308:intron | 15.0% |
| !! | TAATATTATAGAACATTTCA+AGG | + | chr1.4:86313665-86313684 | None:intergenic | 15.0% |
| !!! | CCAATTATTTTATTTAAGAA+TGG | - | chr1.4:86313561-86313580 | MS.gene029308:intron | 15.0% |
| !!! | TACATTTTCTTAACAAAAAA+AGG | - | chr1.4:86314143-86314162 | MS.gene029308:intron | 15.0% |
| !!! | TTTTTTACTGTTTTTTTATC+TGG | - | chr1.4:86314673-86314692 | MS.gene029308:CDS | 15.0% |
| !! | AAGAAAAAAATGGATAGAAT+AGG | + | chr1.4:86314171-86314190 | None:intergenic | 20.0% |
| !! | ACCGATGTATAAATAAATAA+GGG | + | chr1.4:86313727-86313746 | None:intergenic | 20.0% |
| !! | ATAAATAAATAAGGGGAAAA+AGG | + | chr1.4:86313719-86313738 | None:intergenic | 20.0% |
| !! | ATATGTCCTAATTGTTTAAA+TGG | - | chr1.4:86315270-86315289 | MS.gene029308:CDS | 20.0% |
| !! | CATTTAGGAATTGAAATAAA+TGG | - | chr1.4:86312879-86312898 | MS.gene029308:intron | 20.0% |
| !! | GCATATAATGAAATTGTATA+TGG | - | chr1.4:86313083-86313102 | MS.gene029308:intron | 20.0% |
| !! | TATATGAATTATAAGAAGAG+CGG | - | chr1.4:86312525-86312544 | MS.gene029308:intron | 20.0% |
| !! | TCAAAACAAAATTTAAAAGC+AGG | + | chr1.4:86315466-86315485 | None:intergenic | 20.0% |
| !! | TTGAAACTAATAACAAATTC+TGG | + | chr1.4:86314060-86314079 | None:intergenic | 20.0% |
| !!! | AGAATTTGTTATTAGTTTCA+AGG | - | chr1.4:86314059-86314078 | MS.gene029308:intron | 20.0% |
| !!! | AGTGGAAGAATAATATTTTT+GGG | - | chr1.4:86314446-86314465 | MS.gene029308:intron | 20.0% |
| !!! | ATGATTTTTTGAAAAAGTTG+AGG | - | chr1.4:86315023-86315042 | MS.gene029308:CDS | 20.0% |
| !!! | TAACTAGTTGATATATGATT+CGG | - | chr1.4:86314234-86314253 | MS.gene029308:intron | 20.0% |
| !!! | TATACTTTTATTTTGCTCAA+CGG | + | chr1.4:86313054-86313073 | None:intergenic | 20.0% |
| ! | AATAACTAGCACTGTAAATA+AGG | + | chr1.4:86313849-86313868 | None:intergenic | 25.0% |
| ! | AATATTGTTGAAGTTATCCT+AGG | - | chr1.4:86313472-86313491 | MS.gene029308:intron | 25.0% |
| ! | ATCAATTTGAACATGCTTAA+AGG | + | chr1.4:86312952-86312971 | None:intergenic | 25.0% |
| ! | ATGAAGCCATTTAAACAATT+AGG | + | chr1.4:86315279-86315298 | None:intergenic | 25.0% |
| ! | ATTGGTATATGGTACTTAAT+GGG | - | chr1.4:86314199-86314218 | MS.gene029308:intron | 25.0% |
| ! | CACCGATGTATAAATAAATA+AGG | + | chr1.4:86313728-86313747 | None:intergenic | 25.0% |
| ! | CCGATGTATAAATAAATAAG+GGG | + | chr1.4:86313726-86313745 | None:intergenic | 25.0% |
| ! | CTGAAATTACGAAAAATTGT+CGG | - | chr1.4:86313240-86313259 | MS.gene029308:intron | 25.0% |
| ! | TATTGGTATATGGTACTTAA+TGG | - | chr1.4:86314198-86314217 | MS.gene029308:intron | 25.0% |
| ! | TCAAACATATGAGATTGAAA+GGG | - | chr1.4:86312445-86312464 | MS.gene029308:intron | 25.0% |
| ! | TCTAGATTATTCGTTGTAAT+GGG | - | chr1.4:86313803-86313822 | MS.gene029308:CDS | 25.0% |
| ! | TGAAATTACGAAAAATTGTC+GGG | - | chr1.4:86313241-86313260 | MS.gene029308:intron | 25.0% |
| ! | TGAAATTGTATATGGAAAGT+TGG | - | chr1.4:86313091-86313110 | MS.gene029308:intron | 25.0% |
| ! | TTCAAAATCATTATGATTGC+AGG | + | chr1.4:86312985-86313004 | None:intergenic | 25.0% |
| ! | TTCCATACTAAAAAGTTTCT+TGG | + | chr1.4:86314012-86314031 | None:intergenic | 25.0% |
| ! | TTCTAGATTATTCGTTGTAA+TGG | - | chr1.4:86313802-86313821 | MS.gene029308:CDS | 25.0% |
| !! | ATAATTGGTCTAGAAATCAA+AGG | + | chr1.4:86313549-86313568 | None:intergenic | 25.0% |
| !! | ATTTAATTTCATTAGGACCT+TGG | + | chr1.4:86312857-86312876 | None:intergenic | 25.0% |
| !! | CAATATTCACAGATTCATTT+TGG | + | chr1.4:86315424-86315443 | None:intergenic | 25.0% |
| !! | CCAATCAGTTTTTGAATTAT+GGG | - | chr1.4:86314748-86314767 | MS.gene029308:CDS | 25.0% |
| !! | CCCCTTATTTATTTATACAT+CGG | - | chr1.4:86313723-86313742 | MS.gene029308:intron | 25.0% |
| !! | GAGTGGAAGAATAATATTTT+TGG | - | chr1.4:86314445-86314464 | MS.gene029308:intron | 25.0% |
| !! | GTTGAGCAAAATAAAAGTAT+AGG | - | chr1.4:86313053-86313072 | MS.gene029308:CDS | 25.0% |
| !! | TATCAGATGAATTTGAAATC+TGG | - | chr1.4:86312702-86312721 | MS.gene029308:intron | 25.0% |
| !! | TCCAATCAGTTTTTGAATTA+TGG | - | chr1.4:86314747-86314766 | MS.gene029308:CDS | 25.0% |
| !! | TGTGAATATTGTTAGTTCTT+GGG | - | chr1.4:86315433-86315452 | MS.gene029308:CDS | 25.0% |
| !!! | ATCCAAGAAACTTTTTAGTA+TGG | - | chr1.4:86314007-86314026 | MS.gene029308:intron | 25.0% |
| !!! | ATTGTTTTATGTTAATCACC+AGG | - | chr1.4:86314982-86315001 | MS.gene029308:CDS | 25.0% |
| !!! | GTGGAAGAATAATATTTTTG+GGG | - | chr1.4:86314447-86314466 | MS.gene029308:intron | 25.0% |
| !!! | TATATCATGCGTTTTTTTAC+AGG | - | chr1.4:86314406-86314425 | MS.gene029308:intron | 25.0% |
| !!! | TGTTTTTTTATCTGGAGTTT+TGG | - | chr1.4:86314681-86314700 | MS.gene029308:CDS | 25.0% |
| AAACAAGTTTCCAAAAGGAA+CGG | + | chr1.4:86314370-86314389 | None:intergenic | 30.0% | |
| AAATTACGAAAAATTGTCGG+GGG | - | chr1.4:86313243-86313262 | MS.gene029308:intron | 30.0% | |
| AACAAATTCTGGATAGATGT+GGG | + | chr1.4:86314049-86314068 | None:intergenic | 30.0% | |
| ACTAATAACACCAAGAAACA+AGG | - | chr1.4:86312419-86312438 | MS.gene029308:intron | 30.0% | |
| ATATGACTCTCTGATTTCAT+TGG | + | chr1.4:86312483-86312502 | None:intergenic | 30.0% | |
| ATCATCTTGTGTGATCAAAA+TGG | - | chr1.4:86315314-86315333 | MS.gene029308:CDS | 30.0% | |
| ATGAAATCAGAGAGTCATAT+TGG | - | chr1.4:86312483-86312502 | MS.gene029308:intron | 30.0% | |
| CCCATAATTCAAAAACTGAT+TGG | + | chr1.4:86314751-86314770 | None:intergenic | 30.0% | |
| CTAAAAAGTTTCTTGGATTG+TGG | + | chr1.4:86314005-86314024 | None:intergenic | 30.0% | |
| GAAAGAAACAAGTTTCCAAA+AGG | + | chr1.4:86314375-86314394 | None:intergenic | 30.0% | |
| GAAATTACGAAAAATTGTCG+GGG | - | chr1.4:86313242-86313261 | MS.gene029308:intron | 30.0% | |
| GAAGATAGCAGTAATAACAT+GGG | - | chr1.4:86313008-86313027 | MS.gene029308:CDS | 30.0% | |
| GGAATTGAAATAAATGGAGT+AGG | - | chr1.4:86312885-86312904 | MS.gene029308:intron | 30.0% | |
| GTCAAACATATGAGATTGAA+AGG | - | chr1.4:86312444-86312463 | MS.gene029308:intron | 30.0% | |
| GTGCAAAAGATGTTTCTTAA+GGG | - | chr1.4:86313125-86313144 | MS.gene029308:intron | 30.0% | |
| GTTATTAGTGATGTACATTG+AGG | + | chr1.4:86312408-86312427 | None:intergenic | 30.0% | |
| TAACAAATTCTGGATAGATG+TGG | + | chr1.4:86314050-86314069 | None:intergenic | 30.0% | |
| TACCAAATTTCCTTTGTGAA+AGG | - | chr1.4:86314573-86314592 | MS.gene029308:CDS | 30.0% | |
| TACCTACTATGATGAATTGT+GGG | - | chr1.4:86313312-86313331 | MS.gene029308:intron | 30.0% | |
| TACTAATATATCTCTCTGCA+TGG | - | chr1.4:86313589-86313608 | MS.gene029308:intron | 30.0% | |
| TCACAAAGGAAATTTGGTAT+TGG | + | chr1.4:86314572-86314591 | None:intergenic | 30.0% | |
| TGAAGATAGCAGTAATAACA+TGG | - | chr1.4:86313007-86313026 | MS.gene029308:CDS | 30.0% | |
| TGATGATTAGAAATTCAACC+TGG | + | chr1.4:86313417-86313436 | None:intergenic | 30.0% | |
| TGTATATGGAAAGTTGGATT+TGG | - | chr1.4:86313097-86313116 | MS.gene029308:intron | 30.0% | |
| TGTGCAAAAGATGTTTCTTA+AGG | - | chr1.4:86313124-86313143 | MS.gene029308:intron | 30.0% | |
| TTACCTACTATGATGAATTG+TGG | - | chr1.4:86313311-86313330 | MS.gene029308:intron | 30.0% | |
| TTTGATCACACAAGATGATT+TGG | + | chr1.4:86315313-86315332 | None:intergenic | 30.0% | |
| ! | AATTTGATAGTTGTGTTGCA+TGG | - | chr1.4:86313687-86313706 | MS.gene029308:intron | 30.0% |
| ! | CTGTGAATATTGTTAGTTCT+TGG | - | chr1.4:86315432-86315451 | MS.gene029308:CDS | 30.0% |
| ! | GAAATTTGGTATTGGAACTT+GGG | + | chr1.4:86314564-86314583 | None:intergenic | 30.0% |
| ! | TTTTGCTGCTATCATAAACA+AGG | - | chr1.4:86314839-86314858 | MS.gene029308:CDS | 30.0% |
| !!! | AGGCTTACTTTATTTTGTAC+GGG | - | chr1.4:86315344-86315363 | MS.gene029308:CDS | 30.0% |
| !!! | GAGGCTTACTTTATTTTGTA+CGG | - | chr1.4:86315343-86315362 | MS.gene029308:CDS | 30.0% |
| !!! | TTTTTTACAGGCCTTCTTTT+GGG | - | chr1.4:86314418-86314437 | MS.gene029308:intron | 30.0% |
| !!! | TTTTTTTACAGGCCTTCTTT+TGG | - | chr1.4:86314417-86314436 | MS.gene029308:intron | 30.0% |
| AAAAAGTTGAGGTCAGTTGT+GGG | - | chr1.4:86315034-86315053 | MS.gene029308:CDS | 35.0% | |
| AAATAAGGGGAAAAAGGTTC+TGG | + | chr1.4:86313713-86313732 | None:intergenic | 35.0% | |
| AAATACACTGCCTTTCACAA+AGG | + | chr1.4:86314586-86314605 | None:intergenic | 35.0% | |
| AACATGCTTAAAGGTGACAT+TGG | + | chr1.4:86312943-86312962 | None:intergenic | 35.0% | |
| AAGATGTTTCTTAAGGGAAC+TGG | - | chr1.4:86313131-86313150 | MS.gene029308:intron | 35.0% | |
| AATTACGAAAAATTGTCGGG+GGG | - | chr1.4:86313244-86313263 | MS.gene029308:intron | 35.0% | |
| ACTATCATAGTCACTACTAC+TGG | + | chr1.4:86313968-86313987 | None:intergenic | 35.0% | |
| AGATATCAATTAAGACCGAG+AGG | + | chr1.4:86314947-86314966 | None:intergenic | 35.0% | |
| AGCAGTAATAACATGGGAAA+TGG | - | chr1.4:86313014-86313033 | MS.gene029308:CDS | 35.0% | |
| AGTAGTAGTGACTATGATAG+TGG | - | chr1.4:86313967-86313986 | MS.gene029308:CDS | 35.0% | |
| ATAAGTTTCATATCCTCTGC+AGG | + | chr1.4:86314867-86314886 | None:intergenic | 35.0% | |
| ATGCTAATGTTCGATATGCT+TGG | - | chr1.4:86313267-86313286 | MS.gene029308:intron | 35.0% | |
| ATTGCGATGTTGACGAAAAT+GGG | - | chr1.4:86313866-86313885 | MS.gene029308:CDS | 35.0% | |
| CCATATTCCCCATTATTACA+CGG | + | chr1.4:86313912-86313931 | None:intergenic | 35.0% | |
| CCTTTACACTTCAAACTTTG+CGG | - | chr1.4:86315374-86315393 | MS.gene029308:CDS | 35.0% | |
| CTATCATAGTCACTACTACT+GGG | + | chr1.4:86313967-86313986 | None:intergenic | 35.0% | |
| GATATCAATTAAGACCGAGA+GGG | + | chr1.4:86314946-86314965 | None:intergenic | 35.0% | |
| GATGTACATTGAGGTAATAC+TGG | + | chr1.4:86312399-86312418 | None:intergenic | 35.0% | |
| GTAGTAGTGACTATGATAGT+GGG | - | chr1.4:86313968-86313987 | MS.gene029308:CDS | 35.0% | |
| GTATGTTCCATGTCAAAAAC+AGG | + | chr1.4:86315495-86315514 | None:intergenic | 35.0% | |
| GTGATCAAAATGGAATCTTG+AGG | - | chr1.4:86315324-86315343 | MS.gene029308:CDS | 35.0% | |
| TAGAAATTCAACCTGGCAAA+AGG | + | chr1.4:86313410-86313429 | None:intergenic | 35.0% | |
| TATTGCGATGTTGACGAAAA+TGG | - | chr1.4:86313865-86313884 | MS.gene029308:CDS | 35.0% | |
| TGCCTTTCACAAAGGAAATT+TGG | + | chr1.4:86314578-86314597 | None:intergenic | 35.0% | |
| TTAAATAGAGGGGGAAACTT+TGG | + | chr1.4:86315206-86315225 | None:intergenic | 35.0% | |
| TTGAATTATGGGATACCTCA+GGG | - | chr1.4:86314759-86314778 | MS.gene029308:CDS | 35.0% | |
| TTGGTCTAGAAATCAAAGGA+AGG | + | chr1.4:86313545-86313564 | None:intergenic | 35.0% | |
| TTTGAATTATGGGATACCTC+AGG | - | chr1.4:86314758-86314777 | MS.gene029308:CDS | 35.0% | |
| ! | ATTATGATTGCAGGCTTGTT+TGG | + | chr1.4:86312976-86312995 | None:intergenic | 35.0% |
| ! | CGTTTGATGGTCTATCAAAA+TGG | - | chr1.4:86312558-86312577 | MS.gene029308:intron | 35.0% |
| ! | GGAAATTTGGTATTGGAACT+TGG | + | chr1.4:86314565-86314584 | None:intergenic | 35.0% |
| ! | GTCTTTTGCCGTGTAATAAT+GGG | - | chr1.4:86313901-86313920 | MS.gene029308:CDS | 35.0% |
| ! | TAGTAGTGACTATGATAGTG+GGG | - | chr1.4:86313969-86313988 | MS.gene029308:CDS | 35.0% |
| ! | TCTTTTGCCGTGTAATAATG+GGG | - | chr1.4:86313902-86313921 | MS.gene029308:CDS | 35.0% |
| ! | TGTTTGACAACCTTGTTTCT+TGG | + | chr1.4:86312432-86312451 | None:intergenic | 35.0% |
| ! | TTGATGGTCTATCAAAATGG+TGG | - | chr1.4:86312561-86312580 | MS.gene029308:intron | 35.0% |
| !! | AACACAAGGTACTTTTCTCA+AGG | - | chr1.4:86315095-86315114 | MS.gene029308:CDS | 35.0% |
| !! | GTAATGTAAACTAGCTTTGC+TGG | - | chr1.4:86314916-86314935 | MS.gene029308:CDS | 35.0% |
| !! | TTCGTTGTAATGGGTAGAAA+AGG | - | chr1.4:86313812-86313831 | MS.gene029308:CDS | 35.0% |
| !!! | AGGCTTTGATTTTTTCTGCA+AGG | - | chr1.4:86315115-86315134 | MS.gene029308:CDS | 35.0% |
| !!! | GGCTTACTTTATTTTGTACG+GGG | - | chr1.4:86315345-86315364 | MS.gene029308:CDS | 35.0% |
| !!! | TTACTTTATTTTGTACGGGG+AGG | - | chr1.4:86315348-86315367 | MS.gene029308:CDS | 35.0% |
| AAAAGTCCAGCACAAGATGA+TGG | + | chr1.4:86312674-86312693 | None:intergenic | 40.0% | |
| AACACGACAAATTCAAGCCT+AGG | + | chr1.4:86313492-86313511 | None:intergenic | 40.0% | |
| ACTATGATGAATTGTGGGCT+TGG | - | chr1.4:86313317-86313336 | MS.gene029308:intron | 40.0% | |
| AGAGTCCAGCGTTAAATAGA+GGG | + | chr1.4:86315217-86315236 | None:intergenic | 40.0% | |
| AGCCCACAATTCATCATAGT+AGG | + | chr1.4:86313317-86313336 | None:intergenic | 40.0% | |
| ATATGTACCATCTGCACTTC+AGG | - | chr1.4:86314889-86314908 | MS.gene029308:CDS | 40.0% | |
| ATTGCTTGGATTGATGAGAC+AGG | - | chr1.4:86312738-86312757 | MS.gene029308:intron | 40.0% | |
| CATAGTAGGTAACTCTCCTT+TGG | + | chr1.4:86313303-86313322 | None:intergenic | 40.0% | |
| CGGAAGCAGCATAAATTTCA+GGG | + | chr1.4:86312776-86312795 | None:intergenic | 40.0% | |
| GAAAAAGTTGAGGTCAGTTG+TGG | - | chr1.4:86315033-86315052 | MS.gene029308:CDS | 40.0% | |
| GATAGACCATCAAACGTTCT+GGG | + | chr1.4:86312554-86312573 | None:intergenic | 40.0% | |
| GATGAAACCATCCATCCAAA+TGG | + | chr1.4:86314266-86314285 | None:intergenic | 40.0% | |
| GGAATGTGCTTAATCTGAAG+CGG | - | chr1.4:86312328-86312347 | MS.gene029308:intron | 40.0% | |
| GGTCATGAATCTTTGTTCCA+AGG | - | chr1.4:86312837-86312856 | MS.gene029308:CDS | 40.0% | |
| GTCTCATCAATCCAAGCAAT+AGG | + | chr1.4:86312738-86312757 | None:intergenic | 40.0% | |
| GTTTGCAACAACCTATTGCT+TGG | - | chr1.4:86312724-86312743 | MS.gene029308:intron | 40.0% | |
| TAGAGTCCAGCGTTAAATAG+AGG | + | chr1.4:86315218-86315237 | None:intergenic | 40.0% | |
| TATGTACCATCTGCACTTCA+GGG | - | chr1.4:86314890-86314909 | MS.gene029308:CDS | 40.0% | |
| TCCTGATTGCAGAGATCATA+AGG | + | chr1.4:86312807-86312826 | None:intergenic | 40.0% | |
| TCGGAAGCAGCATAAATTTC+AGG | + | chr1.4:86312777-86312796 | None:intergenic | 40.0% | |
| TCTAAATGCATGCATGGCAT+TGG | - | chr1.4:86313359-86313378 | MS.gene029308:CDS | 40.0% | |
| TCTGCATCTAAATGCATGCA+TGG | - | chr1.4:86313353-86313372 | MS.gene029308:CDS | 40.0% | |
| TGAAGTGCAGATGGTACATA+TGG | + | chr1.4:86314890-86314909 | None:intergenic | 40.0% | |
| TGATAGACCATCAAACGTTC+TGG | + | chr1.4:86312555-86312574 | None:intergenic | 40.0% | |
| TGATGTAAAGAAAGCAGCTG+TGG | - | chr1.4:86312632-86312651 | MS.gene029308:intron | 40.0% | |
| TGCATGCATTTAGATGCAGA+TGG | + | chr1.4:86313353-86313372 | None:intergenic | 40.0% | |
| TTACCCCTTCTCAAGTACAT+CGG | - | chr1.4:86313184-86313203 | MS.gene029308:intron | 40.0% | |
| TTGCGATGTTGACGAAAATG+GGG | - | chr1.4:86313867-86313886 | MS.gene029308:CDS | 40.0% | |
| TTGCTTGGATTGATGAGACA+GGG | - | chr1.4:86312739-86312758 | MS.gene029308:intron | 40.0% | |
| ! | AAACAGCAAGTATTGCCTCA+AGG | + | chr1.4:86315163-86315182 | None:intergenic | 40.0% |
| ! | AACATGGGAAATGGAAGTGT+TGG | - | chr1.4:86313023-86313042 | MS.gene029308:CDS | 40.0% |
| ! | AGTAGGCACTGTAAGTTCTT+TGG | - | chr1.4:86314522-86314541 | MS.gene029308:CDS | 40.0% |
| ! | ATATTGGACGATCGTTGGTT+AGG | - | chr1.4:86312499-86312518 | MS.gene029308:intron | 40.0% |
| ! | ATTTATGCTGCTTCCGATGA+AGG | - | chr1.4:86312780-86312799 | MS.gene029308:CDS | 40.0% |
| ! | CCGCAAAGTTTGAAGTGTAA+AGG | + | chr1.4:86315377-86315396 | None:intergenic | 40.0% |
| ! | CCGTGTAATAATGGGGAATA+TGG | - | chr1.4:86313909-86313928 | MS.gene029308:CDS | 40.0% |
| ! | CGTCTTTTGCCGTGTAATAA+TGG | - | chr1.4:86313900-86313919 | MS.gene029308:CDS | 40.0% |
| ! | CTTAAGGGAACTGGTAGTTT+TGG | - | chr1.4:86313140-86313159 | MS.gene029308:intron | 40.0% |
| ! | GATGGTTTCATCTTCTGGTT+GGG | - | chr1.4:86314274-86314293 | MS.gene029308:intron | 40.0% |
| ! | GCAGCAAAAAGCGTAGAAAA+AGG | + | chr1.4:86314828-86314847 | None:intergenic | 40.0% |
| ! | TCTGAACGTGGCAAGATTTT+AGG | + | chr1.4:86314493-86314512 | None:intergenic | 40.0% |
| ! | TGGTCTATCAAAATGGTGGA+TGG | - | chr1.4:86312565-86312584 | MS.gene029308:intron | 40.0% |
| ! | TTTATGCTGCTTCCGATGAA+GGG | - | chr1.4:86312781-86312800 | MS.gene029308:CDS | 40.0% |
| !! | AGGATGCTGTTGATTTGGTT+AGG | - | chr1.4:86312601-86312620 | MS.gene029308:intron | 40.0% |
| !! | ATGATTCGGTTCACTCCATT+TGG | - | chr1.4:86314248-86314267 | MS.gene029308:intron | 40.0% |
| !! | CTATCAAAATGGTGGATGGA+AGG | - | chr1.4:86312569-86312588 | MS.gene029308:intron | 40.0% |
| !! | GTACTTAATGGGTTGATCAG+AGG | - | chr1.4:86314210-86314229 | MS.gene029308:intron | 40.0% |
| !!! | ATCGCATCCTGTTTTTGACA+TGG | - | chr1.4:86315485-86315504 | MS.gene029308:CDS | 40.0% |
| AAATGGCCATCATCTTGTGC+TGG | - | chr1.4:86312665-86312684 | MS.gene029308:intron | 45.0% | |
| AAGGTCTCTTCTGATGCTGA+AGG | - | chr1.4:86314078-86314097 | MS.gene029308:intron | 45.0% | |
| AATATGGAGCTTCTCCATCC+TGG | - | chr1.4:86313925-86313944 | MS.gene029308:CDS | 45.0% | |
| ACCAAATCAACAGCATCCTG+TGG | + | chr1.4:86312600-86312619 | None:intergenic | 45.0% | |
| ACCTTGTGTTGAAGAAGACC+AGG | + | chr1.4:86315085-86315104 | None:intergenic | 45.0% | |
| AGTCCAGCGTTAAATAGAGG+GGG | + | chr1.4:86315215-86315234 | None:intergenic | 45.0% | |
| ATACCTCAGGGAATTCCAAC+TGG | - | chr1.4:86314771-86314790 | MS.gene029308:CDS | 45.0% | |
| ATTCAACCTGGCAAAAGGAC+AGG | + | chr1.4:86313405-86313424 | None:intergenic | 45.0% | |
| CATAAACAAGGTTCCTGCAG+AGG | - | chr1.4:86314851-86314870 | MS.gene029308:CDS | 45.0% | |
| CATAGTCACTACTACTGGGA+CGG | + | chr1.4:86313963-86313982 | None:intergenic | 45.0% | |
| CTGCGGTTATTTATGCCTTG+AGG | - | chr1.4:86315145-86315164 | MS.gene029308:CDS | 45.0% | |
| GAGATCATAAGGCCCTTCAT+CGG | + | chr1.4:86312796-86312815 | None:intergenic | 45.0% | |
| GAGTCATATTGGACGATCGT+TGG | - | chr1.4:86312494-86312513 | MS.gene029308:intron | 45.0% | |
| GAGTCCAGCGTTAAATAGAG+GGG | + | chr1.4:86315216-86315235 | None:intergenic | 45.0% | |
| GCCTTATGATCTCTGCAATC+AGG | - | chr1.4:86312803-86312822 | MS.gene029308:CDS | 45.0% | |
| GCTGTGGAGGTAGAGTTAAA+TGG | - | chr1.4:86312648-86312667 | MS.gene029308:intron | 45.0% | |
| GGATGGATGGTTTCATCTTC+TGG | - | chr1.4:86314269-86314288 | MS.gene029308:intron | 45.0% | |
| GGATGGTTTCATCTTCTGGT+TGG | - | chr1.4:86314273-86314292 | MS.gene029308:intron | 45.0% | |
| GTTCACTCCATTTGGATGGA+TGG | - | chr1.4:86314256-86314275 | MS.gene029308:intron | 45.0% | |
| TAACGCTGGACTCTAGTCAA+GGG | - | chr1.4:86315223-86315242 | MS.gene029308:CDS | 45.0% | |
| TACATACCCTGAAGTGCAGA+TGG | + | chr1.4:86314899-86314918 | None:intergenic | 45.0% | |
| TCAAGGGTTTATCTGCTGTG+TGG | - | chr1.4:86315239-86315258 | MS.gene029308:CDS | 45.0% | |
| TCCACTCACATCCCAAAAGA+AGG | + | chr1.4:86314432-86314451 | None:intergenic | 45.0% | |
| TGCAATCAGGACAGCAGAAA+AGG | - | chr1.4:86312816-86312835 | MS.gene029308:CDS | 45.0% | |
| TGTAAAGAAAGCAGCTGTGG+AGG | - | chr1.4:86312635-86312654 | MS.gene029308:intron | 45.0% | |
| TTAACGCTGGACTCTAGTCA+AGG | - | chr1.4:86315222-86315241 | MS.gene029308:CDS | 45.0% | |
| TTCGGTTCACTCCATTTGGA+TGG | - | chr1.4:86314252-86314271 | MS.gene029308:intron | 45.0% | |
| TTTCCCCCTCTATTTAACGC+TGG | - | chr1.4:86315209-86315228 | MS.gene029308:CDS | 45.0% | |
| ! | ACCTGGTCTTCTTCAACACA+AGG | - | chr1.4:86315081-86315100 | MS.gene029308:CDS | 45.0% |
| ! | TCCACAGGATGCTGTTGATT+TGG | - | chr1.4:86312596-86312615 | MS.gene029308:intron | 45.0% |
| ! | TGCACCGATGTACTTGAGAA+GGG | + | chr1.4:86313191-86313210 | None:intergenic | 45.0% |
| !! | ACAATGGAAAGGCGTCTAAC+AGG | - | chr1.4:86312307-86312326 | MS.gene029308:intron | 45.0% |
| !! | TAGTGACTATGATAGTGGGG+TGG | - | chr1.4:86313972-86313991 | MS.gene029308:CDS | 45.0% |
| !! | TTTGTGAGTGCCGTTCCTTT+TGG | - | chr1.4:86314357-86314376 | MS.gene029308:intron | 45.0% |
| !!! | CACGAGTCATCTTTTTTGCC+TGG | + | chr1.4:86315003-86315022 | None:intergenic | 45.0% |
| !!! | GTGGCAAGATTTTAGGACCA+TGG | + | chr1.4:86314486-86314505 | None:intergenic | 45.0% |
| !! | ATATTATAATAAGAAAAAAA+TGG | + | chr1.4:86314181-86314200 | None:intergenic | 5.0% |
| !!! | TTTTTTTCTTATTATAATAT+TGG | - | chr1.4:86314181-86314200 | MS.gene029308:intron | 5.0% |
| ACTCTCGAAGACTCTGAACG+TGG | + | chr1.4:86314505-86314524 | None:intergenic | 50.0% | |
| AGCGTAGAAAAAGGCAACCG+AGG | + | chr1.4:86314819-86314838 | None:intergenic | 50.0% | |
| CGTAGAAAAAGGCAACCGAG+GGG | + | chr1.4:86314817-86314836 | None:intergenic | 50.0% | |
| CGTTCAGAGTCTTCGAGAGT+AGG | - | chr1.4:86314505-86314524 | MS.gene029308:CDS | 50.0% | |
| CTCTTGCGAGCTACATTACC+TGG | - | chr1.4:86315064-86315083 | MS.gene029308:CDS | 50.0% | |
| CTGAAGCTTCAACATCCCCT+CGG | - | chr1.4:86314799-86314818 | MS.gene029308:CDS | 50.0% | |
| GAACCAGTTGGAATTCCCTG+AGG | + | chr1.4:86314777-86314796 | None:intergenic | 50.0% | |
| GAGTAGGTGCATCCAAGTTG+GGG | - | chr1.4:86312901-86312920 | MS.gene029308:intron | 50.0% | |
| GCGTAGAAAAAGGCAACCGA+GGG | + | chr1.4:86314818-86314837 | None:intergenic | 50.0% | |
| GGAGTAGGTGCATCCAAGTT+GGG | - | chr1.4:86312900-86312919 | MS.gene029308:intron | 50.0% | |
| GGGGTTAATTCAGCTAGCCA+TGG | - | chr1.4:86314466-86314485 | MS.gene029308:CDS | 50.0% | |
| TGGAGTAGGTGCATCCAAGT+TGG | - | chr1.4:86312899-86312918 | MS.gene029308:intron | 50.0% | |
| TGGATGGAAGGACTTTCCAC+AGG | - | chr1.4:86312581-86312600 | MS.gene029308:intron | 50.0% | |
| TTCTGCAAGGTCTTCTGCTG+CGG | - | chr1.4:86315128-86315147 | MS.gene029308:CDS | 50.0% | |
| ! | AGTAGGTGCATCCAAGTTGG+GGG | - | chr1.4:86312902-86312921 | MS.gene029308:intron | 50.0% |
| ! | CAAGTTGGGGGAGTGTATTG+GGG | - | chr1.4:86312914-86312933 | MS.gene029308:intron | 50.0% |
| ! | CCAAGTTGGGGGAGTGTATT+GGG | - | chr1.4:86312913-86312932 | MS.gene029308:intron | 50.0% |
| ! | CTGCACCGATGTACTTGAGA+AGG | + | chr1.4:86313192-86313211 | None:intergenic | 50.0% |
| ! | GCACCGATGTACTTGAGAAG+GGG | + | chr1.4:86313190-86313209 | None:intergenic | 50.0% |
| ! | TCCAAGTTGGGGGAGTGTAT+TGG | - | chr1.4:86312912-86312931 | MS.gene029308:intron | 50.0% |
| !! | GCTTGGCTTGCTTCTTCCAA+AGG | - | chr1.4:86313284-86313303 | MS.gene029308:intron | 50.0% |
| !!! | GCCTTCTTTTGGGATGTGAG+TGG | - | chr1.4:86314428-86314447 | MS.gene029308:intron | 50.0% |
| CCCAATACACTCCCCCAACT+TGG | + | chr1.4:86312916-86312935 | None:intergenic | 55.0% | |
| CGAGGGGATGTTGAAGCTTC+AGG | + | chr1.4:86314801-86314820 | None:intergenic | 55.0% | |
| CGGAAGCCCAGAACGTTTGA+TGG | - | chr1.4:86312545-86312564 | MS.gene029308:intron | 55.0% | |
| GAAGCTTCAGGCGAACCAGT+TGG | + | chr1.4:86314789-86314808 | None:intergenic | 55.0% | |
| GCTTTGCTGGATGTCCCTCT+CGG | - | chr1.4:86314929-86314948 | MS.gene029308:CDS | 55.0% | |
| GGTACTGTCTAGTGCCAGGA+TGG | + | chr1.4:86313942-86313961 | None:intergenic | 55.0% | |
| TACATCGGTGCAGTCGCGAT+TGG | - | chr1.4:86313199-86313218 | MS.gene029308:intron | 55.0% | |
| ! | CTGCTACCTGTCCTTTTGCC+AGG | - | chr1.4:86313396-86313415 | MS.gene029308:CDS | 55.0% |
| GGACGGTACTGTCTAGTGCC+AGG | + | chr1.4:86313946-86313965 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 86312297 | 86315582 | 86312297 | ID=MS.gene029308 |
| chr1.4 | mRNA | 86312297 | 86315582 | 86312297 | ID=MS.gene029308.t1;Parent=MS.gene029308 |
| chr1.4 | exon | 86314462 | 86315582 | 86314462 | ID=MS.gene029308.t1.exon1;Parent=MS.gene029308.t1 |
| chr1.4 | CDS | 86314462 | 86315582 | 86314462 | ID=cds.MS.gene029308.t1;Parent=MS.gene029308.t1 |
| chr1.4 | exon | 86313780 | 86314021 | 86313780 | ID=MS.gene029308.t1.exon2;Parent=MS.gene029308.t1 |
| chr1.4 | CDS | 86313780 | 86314021 | 86313780 | ID=cds.MS.gene029308.t1;Parent=MS.gene029308.t1 |
| chr1.4 | exon | 86313348 | 86313451 | 86313348 | ID=MS.gene029308.t1.exon3;Parent=MS.gene029308.t1 |
| chr1.4 | CDS | 86313348 | 86313451 | 86313348 | ID=cds.MS.gene029308.t1;Parent=MS.gene029308.t1 |
| chr1.4 | exon | 86312968 | 86313099 | 86312968 | ID=MS.gene029308.t1.exon4;Parent=MS.gene029308.t1 |
| chr1.4 | CDS | 86312968 | 86313099 | 86312968 | ID=cds.MS.gene029308.t1;Parent=MS.gene029308.t1 |
| chr1.4 | exon | 86312777 | 86312875 | 86312777 | ID=MS.gene029308.t1.exon5;Parent=MS.gene029308.t1 |
| chr1.4 | CDS | 86312777 | 86312875 | 86312777 | ID=cds.MS.gene029308.t1;Parent=MS.gene029308.t1 |
| chr1.4 | exon | 86312297 | 86312317 | 86312297 | ID=MS.gene029308.t1.exon6;Parent=MS.gene029308.t1 |
| chr1.4 | CDS | 86312297 | 86312317 | 86312297 | ID=cds.MS.gene029308.t1;Parent=MS.gene029308.t1 |
| Gene Sequence |
| Protein sequence |
