Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057563.t1 | XP_003621296.1 | 72.2 | 546 | 152 | 0 | 1 | 546 | 1 | 546 | 3.30E-222 | 781.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057563.t1 | Q8RY59 | 36.5 | 576 | 315 | 10 | 1 | 532 | 1 | 569 | 7.2e-85 | 316.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057563.t1 | A2Q3R6 | 72.2 | 546 | 152 | 0 | 1 | 546 | 1 | 546 | 2.4e-222 | 781.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene34237 | MS.gene057563 | PPI |
| MS.gene070621 | MS.gene057563 | PPI |
| MS.gene057563 | MS.gene070678 | PPI |
| MS.gene007901 | MS.gene057563 | PPI |
| MS.gene057563 | MS.gene027783 | PPI |
| MS.gene74956 | MS.gene057563 | PPI |
| MS.gene046444 | MS.gene057563 | PPI |
| MS.gene057563 | MS.gene74956 | PPI |
| MS.gene057563 | MS.gene069103 | PPI |
| MS.gene057563 | MS.gene029308 | PPI |
| MS.gene057563 | MS.gene046409 | PPI |
| MS.gene057563 | MS.gene032270 | PPI |
| MS.gene057563 | MS.gene070621 | PPI |
| MS.gene070678 | MS.gene057563 | PPI |
| MS.gene057563 | MS.gene065039 | PPI |
| MS.gene057563 | MS.gene001066 | PPI |
| MS.gene057563 | MS.gene021778 | PPI |
| MS.gene057563 | MS.gene046455 | PPI |
| MS.gene79552 | MS.gene057563 | PPI |
| MS.gene057563 | MS.gene76207 | PPI |
| MS.gene36039 | MS.gene057563 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057563.t1 | MTR_7g011550 | 72.161 | 546 | 152 | 0 | 1 | 546 | 1 | 546 | 0.0 | 801 |
| MS.gene057563.t1 | MTR_1g112330 | 45.870 | 569 | 269 | 6 | 1 | 533 | 1 | 566 | 2.28e-161 | 472 |
| MS.gene057563.t1 | MTR_1g112330 | 45.760 | 566 | 271 | 6 | 1 | 533 | 1 | 563 | 2.86e-160 | 469 |
| MS.gene057563.t1 | MTR_5g032190 | 44.190 | 568 | 278 | 8 | 1 | 535 | 1 | 562 | 1.03e-153 | 452 |
| MS.gene057563.t1 | MTR_1g112330 | 50.655 | 458 | 198 | 5 | 1 | 433 | 1 | 455 | 2.67e-145 | 427 |
| MS.gene057563.t1 | MTR_5g032190 | 48.678 | 454 | 206 | 6 | 1 | 433 | 1 | 448 | 6.45e-138 | 409 |
| MS.gene057563.t1 | MTR_5g032190 | 48.678 | 454 | 206 | 6 | 1 | 433 | 1 | 448 | 1.67e-137 | 408 |
| MS.gene057563.t1 | MTR_5g029580 | 54.648 | 355 | 147 | 4 | 183 | 533 | 5 | 349 | 1.45e-116 | 350 |
| MS.gene057563.t1 | MTR_7g011640 | 60.000 | 170 | 16 | 3 | 42 | 211 | 1 | 118 | 5.48e-55 | 182 |
| MS.gene057563.t1 | MTR_7g011880 | 55.629 | 151 | 40 | 3 | 358 | 505 | 60 | 186 | 1.27e-41 | 149 |
| MS.gene057563.t1 | MTR_2g090130 | 47.333 | 150 | 44 | 1 | 254 | 403 | 103 | 217 | 4.40e-36 | 134 |
| MS.gene057563.t1 | MTR_2g090130 | 44.737 | 152 | 37 | 2 | 1 | 152 | 1 | 105 | 1.04e-30 | 119 |
| MS.gene057563.t1 | MTR_3g077870 | 28.521 | 284 | 165 | 7 | 257 | 536 | 67 | 316 | 3.33e-30 | 121 |
| MS.gene057563.t1 | MTR_4g105740 | 28.720 | 289 | 172 | 7 | 249 | 533 | 46 | 304 | 2.59e-29 | 118 |
| MS.gene057563.t1 | MTR_4g105740 | 28.819 | 288 | 171 | 7 | 249 | 532 | 46 | 303 | 3.37e-29 | 118 |
| MS.gene057563.t1 | MTR_7g061730 | 90.000 | 50 | 5 | 0 | 483 | 532 | 1 | 50 | 1.65e-23 | 95.5 |
| MS.gene057563.t1 | MTR_7g061850 | 50.943 | 106 | 49 | 1 | 205 | 310 | 21 | 123 | 3.74e-23 | 95.5 |
| MS.gene057563.t1 | MTR_8g088250 | 28.395 | 243 | 145 | 5 | 286 | 526 | 64 | 279 | 7.82e-22 | 96.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057563.t1 | AT1G32230 | 37.500 | 576 | 308 | 14 | 1 | 532 | 1 | 568 | 5.27e-105 | 327 |
| MS.gene057563.t1 | AT1G32230 | 37.500 | 576 | 308 | 14 | 1 | 532 | 1 | 568 | 1.01e-104 | 327 |
| MS.gene057563.t1 | AT1G32230 | 37.500 | 576 | 308 | 14 | 1 | 532 | 1 | 568 | 1.01e-104 | 327 |
| MS.gene057563.t1 | AT1G32230 | 37.500 | 576 | 308 | 14 | 1 | 532 | 1 | 568 | 1.01e-104 | 327 |
| MS.gene057563.t1 | AT1G32230 | 37.500 | 576 | 308 | 14 | 1 | 532 | 1 | 568 | 1.01e-104 | 327 |
| MS.gene057563.t1 | AT1G32230 | 37.435 | 577 | 308 | 14 | 1 | 532 | 1 | 569 | 1.64e-104 | 327 |
| MS.gene057563.t1 | AT2G35510 | 35.398 | 565 | 308 | 12 | 1 | 520 | 1 | 553 | 5.85e-94 | 298 |
| MS.gene057563.t1 | AT2G35510 | 35.398 | 565 | 308 | 12 | 1 | 520 | 1 | 553 | 5.85e-94 | 298 |
| MS.gene057563.t1 | AT2G35510 | 38.631 | 453 | 241 | 9 | 1 | 426 | 1 | 443 | 1.26e-88 | 281 |
| MS.gene057563.t1 | AT1G23550 | 29.893 | 281 | 163 | 6 | 261 | 532 | 63 | 318 | 3.01e-34 | 132 |
| MS.gene057563.t1 | AT5G62520 | 30.588 | 255 | 135 | 6 | 275 | 522 | 77 | 296 | 8.55e-32 | 125 |
| MS.gene057563.t1 | AT1G70440 | 31.064 | 235 | 129 | 3 | 301 | 532 | 101 | 305 | 2.32e-31 | 124 |
| MS.gene057563.t1 | AT1G70440 | 31.064 | 235 | 129 | 3 | 301 | 532 | 101 | 305 | 2.32e-31 | 124 |
| MS.gene057563.t1 | AT5G62520 | 38.365 | 159 | 90 | 4 | 275 | 429 | 77 | 231 | 2.02e-26 | 108 |
| MS.gene057563.t1 | AT3G47720 | 29.787 | 235 | 125 | 6 | 298 | 532 | 117 | 311 | 5.30e-23 | 100 |
Find 131 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATGCTCATTTATATTAT+TGG | 0.110481 | 7.2:-85659524 | None:intergenic |
| CATCTATCTATCAAAATAAA+TGG | 0.152205 | 7.2:+85659592 | MS.gene057563:CDS |
| TCCAGAGGATGTTGTTAATT+TGG | 0.164391 | 7.2:+85659315 | MS.gene057563:CDS |
| GTAGAACCAGCAAAATCTTT+AGG | 0.191057 | 7.2:-85659493 | None:intergenic |
| TGAATCTTTATATGGAAAAT+TGG | 0.207752 | 7.2:+85659771 | MS.gene057563:CDS |
| TCATGTTATTACTAACAAAA+TGG | 0.229358 | 7.2:+85659687 | MS.gene057563:CDS |
| TTGTGATATCAGCTTGCTTT+TGG | 0.252956 | 7.2:-85659915 | None:intergenic |
| GATTATACTGAATCTTTATA+TGG | 0.256554 | 7.2:+85659763 | MS.gene057563:CDS |
| TCATGCTCATTTATATTATT+GGG | 0.265278 | 7.2:-85659523 | None:intergenic |
| TCATACAGGAATGAATTCTT+TGG | 0.271641 | 7.2:+85659819 | MS.gene057563:CDS |
| GAAGATAGAAGCACTGAAAA+AGG | 0.288961 | 7.2:-85661496 | None:intergenic |
| TCTAAACAAATGAGGATTCT+TGG | 0.292737 | 7.2:+85659163 | MS.gene057563:CDS |
| TCTCCATCCAAATGCATATA+TGG | 0.299169 | 7.2:+85660039 | MS.gene057563:CDS |
| TTGAAGCTAACAACAAATTC+TGG | 0.313238 | 7.2:-85660480 | None:intergenic |
| ATGATAACTAACCAGACATT+AGG | 0.326049 | 7.2:-85660093 | None:intergenic |
| TTGTCAACAATGGTGGAATA+TGG | 0.337324 | 7.2:+85659997 | MS.gene057563:CDS |
| GGTCCTATGTCGTGTCATAA+TGG | 0.345844 | 7.2:+85660323 | MS.gene057563:CDS |
| ATCTATCTATCAAAATAAAT+GGG | 0.348429 | 7.2:+85659593 | MS.gene057563:CDS |
| TTCCAAAGTACTATGTGGTT+TGG | 0.351175 | 7.2:+85660430 | MS.gene057563:CDS |
| AGCAGCTGCGAATATGATAA+TGG | 0.353915 | 7.2:+85660390 | MS.gene057563:CDS |
| TCACATTATTGTGATGTTGA+TGG | 0.354266 | 7.2:+85660282 | MS.gene057563:CDS |
| TAGAACCAGCAAAATCTTTA+GGG | 0.360027 | 7.2:-85659492 | None:intergenic |
| AAGTCCCCTTTGGTGTTTGA+AGG | 0.364527 | 7.2:+85660501 | MS.gene057563:CDS |
| TGATATCACAAAAGGAGTTC+GGG | 0.366922 | 7.2:+85659927 | MS.gene057563:CDS |
| CATACAGGAATGAATTCTTT+GGG | 0.374714 | 7.2:+85659820 | MS.gene057563:CDS |
| GCAGCTGCGAATATGATAAT+GGG | 0.405136 | 7.2:+85660391 | MS.gene057563:CDS |
| AACTCCATCCAATGCCTTTG+AGG | 0.406411 | 7.2:-85659062 | None:intergenic |
| TCCTGGTATTTCCAAGTCAT+TGG | 0.407810 | 7.2:+85659213 | MS.gene057563:CDS |
| GGGAGGAGGAAATGTTGATA+TGG | 0.407828 | 7.2:+85659708 | MS.gene057563:CDS |
| TGTTTAGAAACCGCACTTGT+TGG | 0.413660 | 7.2:-85659148 | None:intergenic |
| ACACAAAAGTTGTTTCATAC+AGG | 0.418718 | 7.2:+85659805 | MS.gene057563:CDS |
| CTGATATCACAAAAGGAGTT+CGG | 0.421659 | 7.2:+85659926 | MS.gene057563:CDS |
| GTCCTATGTCGTGTCATAAT+GGG | 0.424961 | 7.2:+85660324 | MS.gene057563:CDS |
| TCCAAATGCATATATGGCTT+TGG | 0.427315 | 7.2:+85660045 | MS.gene057563:CDS |
| TGTTAGCTTCAAGTCCCCTT+TGG | 0.433312 | 7.2:+85660491 | MS.gene057563:CDS |
| TGTTCTACAACAACGGTGAA+TGG | 0.435101 | 7.2:+85659284 | MS.gene057563:CDS |
| GCTATAGAGGTAGAGTTAGA+TGG | 0.435277 | 7.2:+85659367 | MS.gene057563:CDS |
| GCCAAAGCCATATATGCATT+TGG | 0.435315 | 7.2:-85660046 | None:intergenic |
| GGAGTACTTGTCATGTTAGT+AGG | 0.436585 | 7.2:-85661457 | None:intergenic |
| AATTAACAAGGCAGCTATAG+AGG | 0.436836 | 7.2:+85659354 | MS.gene057563:CDS |
| AAAGGCATCCTAGGGGAACT+TGG | 0.437363 | 7.2:-85661478 | None:intergenic |
| CGTCCAGTATGCATTGTTGA+TGG | 0.442291 | 7.2:+85661561 | MS.gene057563:CDS |
| TGATAACTAACCAGACATTA+GGG | 0.444964 | 7.2:-85660092 | None:intergenic |
| GTTTACAACAACCTATTGCT+TGG | 0.450662 | 7.2:+85659443 | MS.gene057563:CDS |
| CATGTTATTACTAACAAAAT+GGG | 0.451731 | 7.2:+85659688 | MS.gene057563:CDS |
| ACTCCATCCAATGCCTTTGA+GGG | 0.456091 | 7.2:-85659061 | None:intergenic |
| TTCCAAACCACATAGTACTT+TGG | 0.458660 | 7.2:-85660432 | None:intergenic |
| ACCAAATTAACAACATCCTC+TGG | 0.460884 | 7.2:-85659316 | None:intergenic |
| TATTTGAACTATAAGAAAAG+TGG | 0.460993 | 7.2:+85659244 | MS.gene057563:CDS |
| TTATCATATTCGCAGCTGCT+TGG | 0.478948 | 7.2:-85660387 | None:intergenic |
| TTTATATGGAAAATTGGATG+TGG | 0.481653 | 7.2:+85659777 | MS.gene057563:CDS |
| ACGTCGATAAGAAACATAGT+AGG | 0.481743 | 7.2:-85661541 | None:intergenic |
| TCCTCGTCAATCCAAGCAAT+AGG | 0.483059 | 7.2:-85659454 | None:intergenic |
| ATACCATCAACAATGCATAC+TGG | 0.492665 | 7.2:-85661564 | None:intergenic |
| TATCACCTTCAAACACCAAA+GGG | 0.493086 | 7.2:-85660506 | None:intergenic |
| AACATGGAGCTTCTTCATCC+TGG | 0.494545 | 7.2:+85660348 | MS.gene057563:CDS |
| TGGAAACAGAATCAAGCATA+TGG | 0.496743 | 7.2:+85660302 | MS.gene057563:CDS |
| TGGGGCAGATGAATCAAAGT+TGG | 0.498331 | 7.2:+85659612 | MS.gene057563:CDS |
| AACAATGGTGGAATATGGAC+CGG | 0.504689 | 7.2:+85660002 | MS.gene057563:CDS |
| GTGGCTTGCTTGTTCTAAAG+AGG | 0.508430 | 7.2:+85659972 | MS.gene057563:CDS |
| CTGTTACCCACCCTAATGTC+TGG | 0.509772 | 7.2:+85660082 | MS.gene057563:CDS |
| AAGCAAGCTGATATCACAAA+AGG | 0.510309 | 7.2:+85659919 | MS.gene057563:CDS |
| ATTTGAACTATAAGAAAAGT+GGG | 0.514811 | 7.2:+85659245 | MS.gene057563:CDS |
| TCGAAGTTGAGGTCAATTGT+TGG | 0.516677 | 7.2:+85661692 | MS.gene057563:CDS |
| AATTGTTGGAAATAATGTAA+TGG | 0.521426 | 7.2:+85661706 | MS.gene057563:CDS |
| ATACCAGGATCAGAGTCATC+TGG | 0.521463 | 7.2:-85659199 | None:intergenic |
| TCATTTGACCCACCACTTGG+TGG | 0.531935 | 7.2:-85661964 | None:intergenic |
| AGTCAGATGTGTAACACATT+GGG | 0.534919 | 7.2:-85659113 | None:intergenic |
| GTGCGGTTTCTAAACAAATG+AGG | 0.538378 | 7.2:+85659155 | MS.gene057563:CDS |
| TATTTAATGTTCTACAACAA+CGG | 0.539329 | 7.2:+85659277 | MS.gene057563:CDS |
| CACTAAATCAAAAGCGCAAG+AGG | 0.540037 | 7.2:+85659086 | MS.gene057563:CDS |
| ATAATACTTGACCAATGACT+TGG | 0.540326 | 7.2:-85659224 | None:intergenic |
| CGTCGATAAGAAACATAGTA+GGG | 0.541703 | 7.2:-85661540 | None:intergenic |
| TTGCTTGGATTGACGAGGAA+GGG | 0.541770 | 7.2:+85659458 | MS.gene057563:CDS |
| GAGTCATTTGACCCACCACT+TGG | 0.544865 | 7.2:-85661967 | None:intergenic |
| GGGGCAGATGAATCAAAGTT+GGG | 0.547456 | 7.2:+85659613 | MS.gene057563:CDS |
| AAACCAGATGACTCTGATCC+TGG | 0.548440 | 7.2:+85659196 | MS.gene057563:CDS |
| AATATATAATATTCAATCAA+AGG | 0.553393 | 7.2:+85661736 | MS.gene057563:CDS |
| TCAATTTCCAAAGTACTATG+TGG | 0.557946 | 7.2:+85660425 | MS.gene057563:CDS |
| TTATATGGAAAATTGGATGT+GGG | 0.558440 | 7.2:+85659778 | MS.gene057563:CDS |
| CAGTCAGATGTGTAACACAT+TGG | 0.569180 | 7.2:-85659114 | None:intergenic |
| AAGCCATATATGCATTTGGA+TGG | 0.569886 | 7.2:-85660042 | None:intergenic |
| AAACCCTCAAAGGCATTGGA+TGG | 0.570520 | 7.2:+85659058 | MS.gene057563:CDS |
| CAATGTGTTACACATCTGAC+TGG | 0.573685 | 7.2:+85659115 | MS.gene057563:CDS |
| TAAAGAGGATTTGTCAACAA+TGG | 0.574734 | 7.2:+85659987 | MS.gene057563:CDS |
| TAGACTTTCAAATGAGGAGG+CGG | 0.577234 | 7.2:+85662007 | MS.gene057563:CDS |
| GTCGAGAGTTATCGCAACTC+AGG | 0.578991 | 7.2:+85659862 | MS.gene057563:CDS |
| AGAGGATTTGTCAACAATGG+TGG | 0.581300 | 7.2:+85659990 | MS.gene057563:CDS |
| ATTGCTTGGATTGACGAGGA+AGG | 0.581526 | 7.2:+85659457 | MS.gene057563:CDS |
| AGACTATCTACATTCTACAA+TGG | 0.583414 | 7.2:+85661194 | MS.gene057563:CDS |
| AAGTGTTAGACTTTCAAATG+AGG | 0.585124 | 7.2:+85662001 | MS.gene057563:CDS |
| ACGCCAATGTTCGTTATGCG+TGG | 0.588075 | 7.2:+85659953 | MS.gene057563:CDS |
| CAATAATATAAATGAGCATG+AGG | 0.588525 | 7.2:+85659525 | MS.gene057563:CDS |
| TTGCAGAGACCACCAAGTGG+TGG | 0.592304 | 7.2:+85661955 | MS.gene057563:intron |
| ACCAATGACTTGGAAATACC+AGG | 0.593841 | 7.2:-85659214 | None:intergenic |
| ACAATGGTGGAATATGGACC+GGG | 0.595516 | 7.2:+85660003 | MS.gene057563:CDS |
| ATTACTAACAAAATGGGAGG+AGG | 0.596613 | 7.2:+85659694 | MS.gene057563:CDS |
| ATGATTTCGTGTCGAAGTTG+AGG | 0.602531 | 7.2:+85661681 | MS.gene057563:CDS |
| TCGTGTCATAATGGGAAACA+TGG | 0.607717 | 7.2:+85660332 | MS.gene057563:CDS |
| TGTTAGACTTTCAAATGAGG+AGG | 0.610686 | 7.2:+85662004 | MS.gene057563:CDS |
| CAAGTACTCCAAGTTCCCCT+AGG | 0.612672 | 7.2:+85661470 | MS.gene057563:CDS |
| ATAAGAAACATAGTAGGGGA+AGG | 0.613362 | 7.2:-85661535 | None:intergenic |
| TGGCAATAGTTAACTCAAAG+AGG | 0.615904 | 7.2:-85662037 | None:intergenic |
| TTCCCATTATGACACGACAT+AGG | 0.617580 | 7.2:-85660326 | None:intergenic |
| AAGCCACGCATAACGAACAT+TGG | 0.620562 | 7.2:-85659956 | None:intergenic |
| ATATCACCTTCAAACACCAA+AGG | 0.621661 | 7.2:-85660507 | None:intergenic |
| TGCAGAGACCACCAAGTGGT+GGG | 0.622851 | 7.2:+85661956 | MS.gene057563:intron |
| TCTATCTTCTATAAGAAACA+TGG | 0.622880 | 7.2:+85661510 | MS.gene057563:CDS |
| AGAGTTATCGCAACTCAGGA+AGG | 0.624695 | 7.2:+85659866 | MS.gene057563:CDS |
| GAAAGATTTCAAAATTAACA+AGG | 0.632912 | 7.2:+85659342 | MS.gene057563:CDS |
| AACTAACCAGACATTAGGGT+GGG | 0.635937 | 7.2:-85660088 | None:intergenic |
| TCTATCTATCAAAATAAATG+GGG | 0.640066 | 7.2:+85659594 | MS.gene057563:CDS |
| GTTATTACTAACAAAATGGG+AGG | 0.647815 | 7.2:+85659691 | MS.gene057563:CDS |
| AATAATATAAATGAGCATGA+GGG | 0.652900 | 7.2:+85659526 | MS.gene057563:CDS |
| ACTAAATCAAAAGCGCAAGA+GGG | 0.652953 | 7.2:+85659087 | MS.gene057563:CDS |
| AAGTTGGGAGAGTATAGTCG+AGG | 0.657753 | 7.2:+85659628 | MS.gene057563:CDS |
| ACCTATTGCTTGGATTGACG+AGG | 0.659220 | 7.2:+85659453 | MS.gene057563:CDS |
| GATATCACAAAAGGAGTTCG+GGG | 0.662559 | 7.2:+85659928 | MS.gene057563:CDS |
| CAGCTGCGAATATGATAATG+GGG | 0.668194 | 7.2:+85660392 | MS.gene057563:CDS |
| AGTTTCAGAACCAACAAGTG+CGG | 0.669836 | 7.2:+85659138 | MS.gene057563:CDS |
| TGTCATGTTAGTAGGCACAC+TGG | 0.673897 | 7.2:-85661449 | None:intergenic |
| ATATCACAAAAGGAGTTCGG+GGG | 0.675411 | 7.2:+85659929 | MS.gene057563:CDS |
| GTCGATAAGAAACATAGTAG+GGG | 0.676235 | 7.2:-85661539 | None:intergenic |
| AGTTGGGAGAGTATAGTCGA+GGG | 0.679494 | 7.2:+85659629 | MS.gene057563:CDS |
| GGAGATAGTTCATAGTTACC+CGG | 0.684160 | 7.2:-85660021 | None:intergenic |
| CTGCGAATATGATAATGGGG+TGG | 0.696616 | 7.2:+85660395 | MS.gene057563:CDS |
| ATCACCTTCAAACACCAAAG+GGG | 0.702949 | 7.2:-85660505 | None:intergenic |
| TAACTAACCAGACATTAGGG+TGG | 0.706033 | 7.2:-85660089 | None:intergenic |
| TATCACAAAAGGAGTTCGGG+GGG | 0.714739 | 7.2:+85659930 | MS.gene057563:CDS |
| TGAATGGTTGAACTATCCAG+AGG | 0.724152 | 7.2:+85659300 | MS.gene057563:CDS |
| TTCTTGCAGAGACCACCAAG+TGG | 0.740785 | 7.2:+85661952 | MS.gene057563:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATAATATTCAATCAA+AGG | + | chr7.2:85661736-85661755 | MS.gene057563:CDS | 10.0% |
| !! | AAAAAAAAATGTTTGGATAA+AGG | - | chr7.2:85661403-85661422 | None:intergenic | 15.0% |
| !! | ATCTATCTATCAAAATAAAT+GGG | + | chr7.2:85659593-85659612 | MS.gene057563:CDS | 15.0% |
| !! | ATTTCTTTCAACAAAAAAAA+AGG | + | chr7.2:85660751-85660770 | MS.gene057563:intron | 15.0% |
| !! | GTTATTATAAATTATTGTGT+TGG | + | chr7.2:85660223-85660242 | MS.gene057563:intron | 15.0% |
| !!! | ATTTTAACTATTTAAGACAT+AGG | - | chr7.2:85661611-85661630 | None:intergenic | 15.0% |
| !!! | TGTTTTTTGTTTTTTTTTAC+AGG | + | chr7.2:85661141-85661160 | MS.gene057563:intron | 15.0% |
| !!! | TTTTGTAGTTTTATTTCTTA+GGG | + | chr7.2:85661038-85661057 | MS.gene057563:intron | 15.0% |
| !!! | TTTTTGTAAGAAGTTTAATT+TGG | + | chr7.2:85661776-85661795 | MS.gene057563:intron | 15.0% |
| !! | AAAAATAAAGAAATAACACG+TGG | + | chr7.2:85660925-85660944 | MS.gene057563:intron | 20.0% |
| !! | AATAATATAAATGAGCATGA+GGG | + | chr7.2:85659526-85659545 | MS.gene057563:CDS | 20.0% |
| !! | AATTGTTGGAAATAATGTAA+TGG | + | chr7.2:85661706-85661725 | MS.gene057563:CDS | 20.0% |
| !! | ACATGGAAATAAATTTCTAA+AGG | - | chr7.2:85660539-85660558 | None:intergenic | 20.0% |
| !! | ATTTGAACTATAAGAAAAGT+GGG | + | chr7.2:85659245-85659264 | MS.gene057563:CDS | 20.0% |
| !! | CATCTATCTATCAAAATAAA+TGG | + | chr7.2:85659592-85659611 | MS.gene057563:CDS | 20.0% |
| !! | CATGTTATTACTAACAAAAT+GGG | + | chr7.2:85659688-85659707 | MS.gene057563:CDS | 20.0% |
| !! | GAAAGATTTCAAAATTAACA+AGG | + | chr7.2:85659342-85659361 | MS.gene057563:CDS | 20.0% |
| !! | GATTATACTGAATCTTTATA+TGG | + | chr7.2:85659763-85659782 | MS.gene057563:CDS | 20.0% |
| !! | TATTTAATGTTCTACAACAA+CGG | + | chr7.2:85659277-85659296 | MS.gene057563:CDS | 20.0% |
| !! | TATTTGAACTATAAGAAAAG+TGG | + | chr7.2:85659244-85659263 | MS.gene057563:CDS | 20.0% |
| !! | TCATGCTCATTTATATTATT+GGG | - | chr7.2:85659526-85659545 | None:intergenic | 20.0% |
| !! | TCATGTTATTACTAACAAAA+TGG | + | chr7.2:85659687-85659706 | MS.gene057563:CDS | 20.0% |
| !! | TCTATCTATCAAAATAAATG+GGG | + | chr7.2:85659594-85659613 | MS.gene057563:CDS | 20.0% |
| !! | TGAATCTTTATATGGAAAAT+TGG | + | chr7.2:85659771-85659790 | MS.gene057563:CDS | 20.0% |
| !!! | ACATTCATGTGAAATATTTT+GGG | + | chr7.2:85661332-85661351 | MS.gene057563:intron | 20.0% |
| !!! | AGATGTAATTTTATCTTATG+TGG | - | chr7.2:85659577-85659596 | None:intergenic | 20.0% |
| !!! | GATGTAATTTTATCTTATGT+GGG | - | chr7.2:85659576-85659595 | None:intergenic | 20.0% |
| !!! | GGTTTTGTAGTTTTTTTTAT+GGG | - | chr7.2:85660827-85660846 | None:intergenic | 20.0% |
| !!! | GTAATAAAGCAAAACATTTT+AGG | - | chr7.2:85661381-85661400 | None:intergenic | 20.0% |
| !!! | GTTTTGTAGTTTTATTTCTT+AGG | + | chr7.2:85661037-85661056 | MS.gene057563:intron | 20.0% |
| !!! | GTTTTGTAGTTTTTTTTATG+GGG | - | chr7.2:85660826-85660845 | None:intergenic | 20.0% |
| !!! | TTTGTAGTTTTATTTCTTAG+GGG | + | chr7.2:85661039-85661058 | MS.gene057563:intron | 20.0% |
| !!! | TTTTGTAGTTTTTTTTATGG+GGG | - | chr7.2:85660825-85660844 | None:intergenic | 20.0% |
| ! | CAATAATATAAATGAGCATG+AGG | + | chr7.2:85659525-85659544 | MS.gene057563:CDS | 25.0% |
| ! | CTCATGCTCATTTATATTAT+TGG | - | chr7.2:85659527-85659546 | None:intergenic | 25.0% |
| ! | TATCATGTGTATCTAAAAAC+AGG | + | chr7.2:85659421-85659440 | MS.gene057563:CDS | 25.0% |
| ! | TCTATCTTCTATAAGAAACA+TGG | + | chr7.2:85661510-85661529 | MS.gene057563:CDS | 25.0% |
| ! | TTATATGGAAAATTGGATGT+GGG | + | chr7.2:85659778-85659797 | MS.gene057563:CDS | 25.0% |
| ! | TTTATATGGAAAATTGGATG+TGG | + | chr7.2:85659777-85659796 | MS.gene057563:CDS | 25.0% |
| !! | CACATTCATGTGAAATATTT+TGG | + | chr7.2:85661331-85661350 | MS.gene057563:intron | 25.0% |
| !! | CATTCATGTGAAATATTTTG+GGG | + | chr7.2:85661333-85661352 | MS.gene057563:intron | 25.0% |
| !!! | CAACTTCAAGTGATTTTAAT+GGG | - | chr7.2:85661845-85661864 | None:intergenic | 25.0% |
| !!! | CCAAACATTTTTTTTTGTGT+GGG | + | chr7.2:85661407-85661426 | MS.gene057563:intron | 25.0% |
| !!! | CGGTTTTGTAGTTTTTTTTA+TGG | - | chr7.2:85660828-85660847 | None:intergenic | 25.0% |
| !!! | TCCAAACATTTTTTTTTGTG+TGG | + | chr7.2:85661406-85661425 | MS.gene057563:intron | 25.0% |
| !!! | TCGTGTTCAACAATTTTTTT+TGG | - | chr7.2:85661114-85661133 | None:intergenic | 25.0% |
| !!! | TTCCTAGTTTTCTATGTAAA+AGG | + | chr7.2:85661255-85661274 | MS.gene057563:intron | 25.0% |
| !!! | TTGTAGTTTTATTTCTTAGG+GGG | + | chr7.2:85661040-85661059 | MS.gene057563:intron | 25.0% |
| AAGTGTTAGACTTTCAAATG+AGG | + | chr7.2:85662001-85662020 | MS.gene057563:CDS | 30.0% | |
| AATAATGTGAACTGTGAACA+TGG | - | chr7.2:85660272-85660291 | None:intergenic | 30.0% | |
| AGACTATCTACATTCTACAA+TGG | + | chr7.2:85661194-85661213 | MS.gene057563:CDS | 30.0% | |
| ATAATACTTGACCAATGACT+TGG | - | chr7.2:85659227-85659246 | None:intergenic | 30.0% | |
| ATCACTAATGTATCATGTCA+TGG | + | chr7.2:85661631-85661650 | MS.gene057563:intron | 30.0% | |
| ATGATAACTAACCAGACATT+AGG | - | chr7.2:85660096-85660115 | None:intergenic | 30.0% | |
| CACATGAATGTGTTCAAATA+AGG | - | chr7.2:85661323-85661342 | None:intergenic | 30.0% | |
| CATACAGGAATGAATTCTTT+GGG | + | chr7.2:85659820-85659839 | MS.gene057563:CDS | 30.0% | |
| CCCACACAAAAAAAAATGTT+TGG | - | chr7.2:85661410-85661429 | None:intergenic | 30.0% | |
| GTAAAACTCATGAAAAAGCT+AGG | - | chr7.2:85661289-85661308 | None:intergenic | 30.0% | |
| GTTATTACTAACAAAATGGG+AGG | + | chr7.2:85659691-85659710 | MS.gene057563:CDS | 30.0% | |
| TAAAGAGGATTTGTCAACAA+TGG | + | chr7.2:85659987-85660006 | MS.gene057563:CDS | 30.0% | |
| TAGAACCAGCAAAATCTTTA+GGG | - | chr7.2:85659495-85659514 | None:intergenic | 30.0% | |
| TATGCCTTCTAATGTTTAGT+TGG | + | chr7.2:85661928-85661947 | MS.gene057563:intron | 30.0% | |
| TCACATTATTGTGATGTTGA+TGG | + | chr7.2:85660282-85660301 | MS.gene057563:CDS | 30.0% | |
| TCATACAGGAATGAATTCTT+TGG | + | chr7.2:85659819-85659838 | MS.gene057563:CDS | 30.0% | |
| TCATGCATGTGCAAAAAAAT+TGG | - | chr7.2:85660893-85660912 | None:intergenic | 30.0% | |
| TCTAAACAAATGAGGATTCT+TGG | + | chr7.2:85659163-85659182 | MS.gene057563:CDS | 30.0% | |
| TGATAACTAACCAGACATTA+GGG | - | chr7.2:85660095-85660114 | None:intergenic | 30.0% | |
| TTGAAGCTAACAACAAATTC+TGG | - | chr7.2:85660483-85660502 | None:intergenic | 30.0% | |
| ! | ACACAAAAGTTGTTTCATAC+AGG | + | chr7.2:85659805-85659824 | MS.gene057563:CDS | 30.0% |
| ! | GCAACTTCAAGTGATTTTAA+TGG | - | chr7.2:85661846-85661865 | None:intergenic | 30.0% |
| ! | TAGTTTGTCGATGATTAACT+TGG | - | chr7.2:85660640-85660659 | None:intergenic | 30.0% |
| ! | TCAATTTCCAAAGTACTATG+TGG | + | chr7.2:85660425-85660444 | MS.gene057563:CDS | 30.0% |
| ! | TGCCTTTTACATAGAAAACT+AGG | - | chr7.2:85661260-85661279 | None:intergenic | 30.0% |
| ! | TTTTTCCCTAAAGATTTTGC+TGG | + | chr7.2:85659487-85659506 | MS.gene057563:CDS | 30.0% |
| !! | TTTTTCAAACCAGAGTAAAG+TGG | - | chr7.2:85660693-85660712 | None:intergenic | 30.0% |
| AAGCAAGCTGATATCACAAA+AGG | + | chr7.2:85659919-85659938 | MS.gene057563:CDS | 35.0% | |
| AAGCCATATATGCATTTGGA+TGG | - | chr7.2:85660045-85660064 | None:intergenic | 35.0% | |
| AATTAACAAGGCAGCTATAG+AGG | + | chr7.2:85659354-85659373 | MS.gene057563:CDS | 35.0% | |
| ACCAAATTAACAACATCCTC+TGG | - | chr7.2:85659319-85659338 | None:intergenic | 35.0% | |
| ACGTCGATAAGAAACATAGT+AGG | - | chr7.2:85661544-85661563 | None:intergenic | 35.0% | |
| ACTTACTAACCACTTTACTC+TGG | + | chr7.2:85660681-85660700 | MS.gene057563:intron | 35.0% | |
| AGTCAGATGTGTAACACATT+GGG | - | chr7.2:85659116-85659135 | None:intergenic | 35.0% | |
| ATAAGAAACATAGTAGGGGA+AGG | - | chr7.2:85661538-85661557 | None:intergenic | 35.0% | |
| ATACCATCAACAATGCATAC+TGG | - | chr7.2:85661567-85661586 | None:intergenic | 35.0% | |
| ATATCACCTTCAAACACCAA+AGG | - | chr7.2:85660510-85660529 | None:intergenic | 35.0% | |
| ATATCTAACACTGAGACACA+TGG | - | chr7.2:85660556-85660575 | None:intergenic | 35.0% | |
| ATCACAACTTCGTGAAAGTT+AGG | - | chr7.2:85660797-85660816 | None:intergenic | 35.0% | |
| ATTACTAACAAAATGGGAGG+AGG | + | chr7.2:85659694-85659713 | MS.gene057563:CDS | 35.0% | |
| CGTCGATAAGAAACATAGTA+GGG | - | chr7.2:85661543-85661562 | None:intergenic | 35.0% | |
| CTGATATCACAAAAGGAGTT+CGG | + | chr7.2:85659926-85659945 | MS.gene057563:CDS | 35.0% | |
| GAAGCCAACTAAACATTAGA+AGG | - | chr7.2:85661935-85661954 | None:intergenic | 35.0% | |
| GTAGAACCAGCAAAATCTTT+AGG | - | chr7.2:85659496-85659515 | None:intergenic | 35.0% | |
| GTCGATAAGAAACATAGTAG+GGG | - | chr7.2:85661542-85661561 | None:intergenic | 35.0% | |
| GTTTACAACAACCTATTGCT+TGG | + | chr7.2:85659443-85659462 | MS.gene057563:CDS | 35.0% | |
| TATCACCTTCAAACACCAAA+GGG | - | chr7.2:85660509-85660528 | None:intergenic | 35.0% | |
| TCACAACTTCGTGAAAGTTA+GGG | - | chr7.2:85660796-85660815 | None:intergenic | 35.0% | |
| TCCAAATGCATATATGGCTT+TGG | + | chr7.2:85660045-85660064 | MS.gene057563:CDS | 35.0% | |
| TCCAGAGGATGTTGTTAATT+TGG | + | chr7.2:85659315-85659334 | MS.gene057563:CDS | 35.0% | |
| TCTCCATCCAAATGCATATA+TGG | + | chr7.2:85660039-85660058 | MS.gene057563:CDS | 35.0% | |
| TGATATCACAAAAGGAGTTC+GGG | + | chr7.2:85659927-85659946 | MS.gene057563:CDS | 35.0% | |
| TGCTACAGATGCAAAACTTA+GGG | - | chr7.2:85660853-85660872 | None:intergenic | 35.0% | |
| TGGAAACAGAATCAAGCATA+TGG | + | chr7.2:85660302-85660321 | MS.gene057563:CDS | 35.0% | |
| TGTTAGACTTTCAAATGAGG+AGG | + | chr7.2:85662004-85662023 | MS.gene057563:CDS | 35.0% | |
| TTCCAAACCACATAGTACTT+TGG | - | chr7.2:85660435-85660454 | None:intergenic | 35.0% | |
| ! | ACTAAATCAAAAGCGCAAGA+GGG | + | chr7.2:85659087-85659106 | MS.gene057563:CDS | 35.0% |
| ! | ATGTGCAAAAAAATTGGCCT+TGG | - | chr7.2:85660887-85660906 | None:intergenic | 35.0% |
| ! | TTCCAAAGTACTATGTGGTT+TGG | + | chr7.2:85660430-85660449 | MS.gene057563:CDS | 35.0% |
| ! | TTGTCAACAATGGTGGAATA+TGG | + | chr7.2:85659997-85660016 | MS.gene057563:CDS | 35.0% |
| ! | TTTTGCATCTGTAGCAGTTT+TGG | + | chr7.2:85660857-85660876 | MS.gene057563:intron | 35.0% |
| !! | ATTTTGGGGAATTCTTCTTC+TGG | + | chr7.2:85661347-85661366 | MS.gene057563:intron | 35.0% |
| !! | CTTCAAGTGATTTTAATGGG+TGG | - | chr7.2:85661842-85661861 | None:intergenic | 35.0% |
| !! | GAAGATAGAAGCACTGAAAA+AGG | - | chr7.2:85661499-85661518 | None:intergenic | 35.0% |
| !! | TGTGCAAAAAAATTGGCCTT+GGG | - | chr7.2:85660886-85660905 | None:intergenic | 35.0% |
| !! | TTGTGATATCAGCTTGCTTT+TGG | - | chr7.2:85659918-85659937 | None:intergenic | 35.0% |
| !!! | GTAAGCTTTTTCACGAGTTT+TGG | + | chr7.2:85661222-85661241 | MS.gene057563:intron | 35.0% |
| AACTAACCAGACATTAGGGT+GGG | - | chr7.2:85660091-85660110 | None:intergenic | 40.0% | |
| ACAACTTCGTGAAAGTTAGG+GGG | - | chr7.2:85660794-85660813 | None:intergenic | 40.0% | |
| AGAGGATTTGTCAACAATGG+TGG | + | chr7.2:85659990-85660009 | MS.gene057563:CDS | 40.0% | |
| AGCAGCTGCGAATATGATAA+TGG | + | chr7.2:85660390-85660409 | MS.gene057563:CDS | 40.0% | |
| AGTTTCAGAACCAACAAGTG+CGG | + | chr7.2:85659138-85659157 | MS.gene057563:CDS | 40.0% | |
| ATATCACAAAAGGAGTTCGG+GGG | + | chr7.2:85659929-85659948 | MS.gene057563:CDS | 40.0% | |
| ATCACCTTCAAACACCAAAG+GGG | - | chr7.2:85660508-85660527 | None:intergenic | 40.0% | |
| ATGATTTCGTGTCGAAGTTG+AGG | + | chr7.2:85661681-85661700 | MS.gene057563:CDS | 40.0% | |
| CAATGTGTTACACATCTGAC+TGG | + | chr7.2:85659115-85659134 | MS.gene057563:CDS | 40.0% | |
| CACAACTTCGTGAAAGTTAG+GGG | - | chr7.2:85660795-85660814 | None:intergenic | 40.0% | |
| CAGTCAGATGTGTAACACAT+TGG | - | chr7.2:85659117-85659136 | None:intergenic | 40.0% | |
| CTACAGATGCAAAACTTAGG+GGG | - | chr7.2:85660851-85660870 | None:intergenic | 40.0% | |
| CTGCTACAGATGCAAAACTT+AGG | - | chr7.2:85660854-85660873 | None:intergenic | 40.0% | |
| GATATCACAAAAGGAGTTCG+GGG | + | chr7.2:85659928-85659947 | MS.gene057563:CDS | 40.0% | |
| GCAGCTGCGAATATGATAAT+GGG | + | chr7.2:85660391-85660410 | MS.gene057563:CDS | 40.0% | |
| GCCAAAGCCATATATGCATT+TGG | - | chr7.2:85660049-85660068 | None:intergenic | 40.0% | |
| GCTACAGATGCAAAACTTAG+GGG | - | chr7.2:85660852-85660871 | None:intergenic | 40.0% | |
| GCTATAGAGGTAGAGTTAGA+TGG | + | chr7.2:85659367-85659386 | MS.gene057563:CDS | 40.0% | |
| GGAGATAGTTCATAGTTACC+CGG | - | chr7.2:85660024-85660043 | None:intergenic | 40.0% | |
| GTCCTATGTCGTGTCATAAT+GGG | + | chr7.2:85660324-85660343 | MS.gene057563:CDS | 40.0% | |
| GTGCGGTTTCTAAACAAATG+AGG | + | chr7.2:85659155-85659174 | MS.gene057563:CDS | 40.0% | |
| TAACTAACCAGACATTAGGG+TGG | - | chr7.2:85660092-85660111 | None:intergenic | 40.0% | |
| TAGACTTTCAAATGAGGAGG+CGG | + | chr7.2:85662007-85662026 | MS.gene057563:CDS | 40.0% | |
| TCCTGGTATTTCCAAGTCAT+TGG | + | chr7.2:85659213-85659232 | MS.gene057563:CDS | 40.0% | |
| TCGAAGTTGAGGTCAATTGT+TGG | + | chr7.2:85661692-85661711 | MS.gene057563:CDS | 40.0% | |
| TGAATGGTTGAACTATCCAG+AGG | + | chr7.2:85659300-85659319 | MS.gene057563:CDS | 40.0% | |
| TGCATAGACCGAGTCAAAAT+TGG | + | chr7.2:85660971-85660990 | MS.gene057563:intron | 40.0% | |
| TGTTCTACAACAACGGTGAA+TGG | + | chr7.2:85659284-85659303 | MS.gene057563:CDS | 40.0% | |
| TGTTTAGAAACCGCACTTGT+TGG | - | chr7.2:85659151-85659170 | None:intergenic | 40.0% | |
| TTATCATATTCGCAGCTGCT+TGG | - | chr7.2:85660390-85660409 | None:intergenic | 40.0% | |
| TTCCCATTATGACACGACAT+AGG | - | chr7.2:85660329-85660348 | None:intergenic | 40.0% | |
| ! | AACAATGGTGGAATATGGAC+CGG | + | chr7.2:85660002-85660021 | MS.gene057563:CDS | 40.0% |
| ! | ACAAAAACCCTCAAAGGCAT+TGG | + | chr7.2:85659054-85659073 | MS.gene057563:CDS | 40.0% |
| ! | ACCAATGACTTGGAAATACC+AGG | - | chr7.2:85659217-85659236 | None:intergenic | 40.0% |
| ! | ATCGCAACTTTGGGAAAGTT+AGG | + | chr7.2:85661068-85661087 | MS.gene057563:intron | 40.0% |
| ! | CACTAAATCAAAAGCGCAAG+AGG | + | chr7.2:85659086-85659105 | MS.gene057563:CDS | 40.0% |
| ! | CAGCTGCGAATATGATAATG+GGG | + | chr7.2:85660392-85660411 | MS.gene057563:CDS | 40.0% |
| ! | CTTTCCCAAAGTTGCGATTT+TGG | - | chr7.2:85661066-85661085 | None:intergenic | 40.0% |
| ! | GGAGTACTTGTCATGTTAGT+AGG | - | chr7.2:85661460-85661479 | None:intergenic | 40.0% |
| ! | TCGCAACTTTGGGAAAGTTA+GGG | + | chr7.2:85661069-85661088 | MS.gene057563:intron | 40.0% |
| ! | TCGTGTCATAATGGGAAACA+TGG | + | chr7.2:85660332-85660351 | MS.gene057563:CDS | 40.0% |
| !! | GTGCAAAAAAATTGGCCTTG+GGG | - | chr7.2:85660885-85660904 | None:intergenic | 40.0% |
| !! | TGCAAAAAAATTGGCCTTGG+GGG | - | chr7.2:85660884-85660903 | None:intergenic | 40.0% |
| AAACCAGATGACTCTGATCC+TGG | + | chr7.2:85659196-85659215 | MS.gene057563:CDS | 45.0% | |
| AACATGGAGCTTCTTCATCC+TGG | + | chr7.2:85660348-85660367 | MS.gene057563:CDS | 45.0% | |
| AACTCCATCCAATGCCTTTG+AGG | - | chr7.2:85659065-85659084 | None:intergenic | 45.0% | |
| AAGCCACGCATAACGAACAT+TGG | - | chr7.2:85659959-85659978 | None:intergenic | 45.0% | |
| ACCTATTGCTTGGATTGACG+AGG | + | chr7.2:85659453-85659472 | MS.gene057563:CDS | 45.0% | |
| ACTCCATCCAATGCCTTTGA+GGG | - | chr7.2:85659064-85659083 | None:intergenic | 45.0% | |
| AGAGTTATCGCAACTCAGGA+AGG | + | chr7.2:85659866-85659885 | MS.gene057563:CDS | 45.0% | |
| ATACCAGGATCAGAGTCATC+TGG | - | chr7.2:85659202-85659221 | None:intergenic | 45.0% | |
| ATTGCTTGGATTGACGAGGA+AGG | + | chr7.2:85659457-85659476 | MS.gene057563:CDS | 45.0% | |
| CGTCCAGTATGCATTGTTGA+TGG | + | chr7.2:85661561-85661580 | MS.gene057563:CDS | 45.0% | |
| GGGAGGAGGAAATGTTGATA+TGG | + | chr7.2:85659708-85659727 | MS.gene057563:CDS | 45.0% | |
| GGGGCAGATGAATCAAAGTT+GGG | + | chr7.2:85659613-85659632 | MS.gene057563:CDS | 45.0% | |
| GGTCCTATGTCGTGTCATAA+TGG | + | chr7.2:85660323-85660342 | MS.gene057563:CDS | 45.0% | |
| TATCACAAAAGGAGTTCGGG+GGG | + | chr7.2:85659930-85659949 | MS.gene057563:CDS | 45.0% | |
| TCCTCGTCAATCCAAGCAAT+AGG | - | chr7.2:85659457-85659476 | None:intergenic | 45.0% | |
| TGCCACAGGTGCAAAACTTA+GGG | + | chr7.2:85661010-85661029 | MS.gene057563:intron | 45.0% | |
| TGGGGCAGATGAATCAAAGT+TGG | + | chr7.2:85659612-85659631 | MS.gene057563:CDS | 45.0% | |
| TGTCATGTTAGTAGGCACAC+TGG | - | chr7.2:85661452-85661471 | None:intergenic | 45.0% | |
| TTGCTTGGATTGACGAGGAA+GGG | + | chr7.2:85659458-85659477 | MS.gene057563:CDS | 45.0% | |
| ! | AAGTTGGGAGAGTATAGTCG+AGG | + | chr7.2:85659628-85659647 | MS.gene057563:CDS | 45.0% |
| ! | ACAATGGTGGAATATGGACC+GGG | + | chr7.2:85660003-85660022 | MS.gene057563:CDS | 45.0% |
| ! | AGTTGGGAGAGTATAGTCGA+GGG | + | chr7.2:85659629-85659648 | MS.gene057563:CDS | 45.0% |
| ! | CAACTTTGGGAAAGTTAGGG+GGG | + | chr7.2:85661072-85661091 | MS.gene057563:intron | 45.0% |
| ! | CGCAACTTTGGGAAAGTTAG+GGG | + | chr7.2:85661070-85661089 | MS.gene057563:intron | 45.0% |
| ! | GCAACTTTGGGAAAGTTAGG+GGG | + | chr7.2:85661071-85661090 | MS.gene057563:intron | 45.0% |
| ! | GGAAAAAGTTGATCACTGCC+AGG | - | chr7.2:85660369-85660388 | None:intergenic | 45.0% |
| ! | TGTTAGCTTCAAGTCCCCTT+TGG | + | chr7.2:85660491-85660510 | MS.gene057563:CDS | 45.0% |
| ! | TTTTGCACCTGTGGCAGTTT+TGG | - | chr7.2:85661006-85661025 | None:intergenic | 45.0% |
| !! | AAACCCTCAAAGGCATTGGA+TGG | + | chr7.2:85659058-85659077 | MS.gene057563:CDS | 45.0% |
| !! | AAGTCCCCTTTGGTGTTTGA+AGG | + | chr7.2:85660501-85660520 | MS.gene057563:CDS | 45.0% |
| !! | ACCGAGTCAAAATTGGCCTT+GGG | + | chr7.2:85660978-85660997 | MS.gene057563:intron | 45.0% |
| !! | AGCACTGAAAAAGGCATCCT+AGG | - | chr7.2:85661490-85661509 | None:intergenic | 45.0% |
| !! | CACTGAAAAAGGCATCCTAG+GGG | - | chr7.2:85661488-85661507 | None:intergenic | 45.0% |
| !! | CTGCGAATATGATAATGGGG+TGG | + | chr7.2:85660395-85660414 | MS.gene057563:CDS | 45.0% |
| !! | GCAAAAAAATTGGCCTTGGG+GGG | - | chr7.2:85660883-85660902 | None:intergenic | 45.0% |
| !! | GCACTGAAAAAGGCATCCTA+GGG | - | chr7.2:85661489-85661508 | None:intergenic | 45.0% |
| !! | GTGGCTTGCTTGTTCTAAAG+AGG | + | chr7.2:85659972-85659991 | MS.gene057563:CDS | 45.0% |
| AACACGTGGCACCTCACTTA+GGG | + | chr7.2:85660939-85660958 | MS.gene057563:intron | 50.0% | |
| ACGCCAATGTTCGTTATGCG+TGG | + | chr7.2:85659953-85659972 | MS.gene057563:CDS | 50.0% | |
| CAAGTACTCCAAGTTCCCCT+AGG | + | chr7.2:85661470-85661489 | MS.gene057563:CDS | 50.0% | |
| CAGATGCAAAACTTAGGGGG+CGG | - | chr7.2:85660848-85660867 | None:intergenic | 50.0% | |
| CCACAGGTGCAAAACTTAGG+GGG | + | chr7.2:85661012-85661031 | MS.gene057563:intron | 50.0% | |
| CTGCCACAGGTGCAAAACTT+AGG | + | chr7.2:85661009-85661028 | MS.gene057563:intron | 50.0% | |
| CTGTTACCCACCCTAATGTC+TGG | + | chr7.2:85660082-85660101 | MS.gene057563:CDS | 50.0% | |
| GAGTCATTTGACCCACCACT+TGG | - | chr7.2:85661970-85661989 | None:intergenic | 50.0% | |
| GCCACAGGTGCAAAACTTAG+GGG | + | chr7.2:85661011-85661030 | MS.gene057563:intron | 50.0% | |
| GGGGCCAAAATCGCAACTTT+GGG | + | chr7.2:85661059-85661078 | MS.gene057563:intron | 50.0% | |
| GTCGAGAGTTATCGCAACTC+AGG | + | chr7.2:85659862-85659881 | MS.gene057563:CDS | 50.0% | |
| TAACACGTGGCACCTCACTT+AGG | + | chr7.2:85660938-85660957 | MS.gene057563:intron | 50.0% | |
| TCATTTGACCCACCACTTGG+TGG | - | chr7.2:85661967-85661986 | None:intergenic | 50.0% | |
| TTCTTGCAGAGACCACCAAG+TGG | + | chr7.2:85661952-85661971 | MS.gene057563:intron | 50.0% | |
| ! | GACCGAGTCAAAATTGGCCT+TGG | + | chr7.2:85660977-85660996 | MS.gene057563:intron | 50.0% |
| !! | AAAGGCATCCTAGGGGAACT+TGG | - | chr7.2:85661481-85661500 | None:intergenic | 50.0% |
| !! | ACACTGGTAGCTTTGACCTG+CGG | - | chr7.2:85661436-85661455 | None:intergenic | 50.0% |
| !! | CCGAGTCAAAATTGGCCTTG+GGG | + | chr7.2:85660979-85660998 | MS.gene057563:intron | 50.0% |
| !! | CGAGTCAAAATTGGCCTTGG+GGG | + | chr7.2:85660980-85660999 | MS.gene057563:intron | 50.0% |
| !!! | CCCCAAGGCCAATTTTGACT+CGG | - | chr7.2:85660982-85661001 | None:intergenic | 50.0% |
| !!! | TTTTTTGTGTGGGATGCCGC+AGG | + | chr7.2:85661417-85661436 | MS.gene057563:intron | 50.0% |
| CAGGTGCAAAACTTAGGGGG+CGG | + | chr7.2:85661015-85661034 | MS.gene057563:intron | 55.0% | |
| GGGGGCCAAAATCGCAACTT+TGG | + | chr7.2:85661058-85661077 | MS.gene057563:intron | 55.0% | |
| TGCAGAGACCACCAAGTGGT+GGG | + | chr7.2:85661956-85661975 | MS.gene057563:intron | 55.0% | |
| TTGCAGAGACCACCAAGTGG+TGG | + | chr7.2:85661955-85661974 | MS.gene057563:intron | 55.0% | |
| ! | CCCCCTAAGTTTTGCACCTG+TGG | - | chr7.2:85661015-85661034 | None:intergenic | 55.0% |
| !! | TGACTCGGTCTATGCAGACG+TGG | - | chr7.2:85660967-85660986 | None:intergenic | 55.0% |
| CAGACGTGGCACCCTAAGTG+AGG | - | chr7.2:85660953-85660972 | None:intergenic | 60.0% | |
| TTGGGGGCCAAAACTGCCAC+AGG | + | chr7.2:85660996-85661015 | MS.gene057563:intron | 60.0% | |
| !! | GTAGCAGTTTTGGCCCCCCA+AGG | + | chr7.2:85660867-85660886 | MS.gene057563:intron | 60.0% |
| !! | TGTGGCAGTTTTGGCCCCCA+AGG | - | chr7.2:85660997-85661016 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 85659049 | 85662050 | 85659049 | ID=MS.gene057563 |
| chr7.2 | mRNA | 85659049 | 85662050 | 85659049 | ID=MS.gene057563.t1;Parent=MS.gene057563 |
| chr7.2 | exon | 85659049 | 85660103 | 85659049 | ID=MS.gene057563.t1.exon1;Parent=MS.gene057563.t1 |
| chr7.2 | CDS | 85659049 | 85660103 | 85659049 | ID=cds.MS.gene057563.t1;Parent=MS.gene057563.t1 |
| chr7.2 | exon | 85660281 | 85660522 | 85660281 | ID=MS.gene057563.t1.exon2;Parent=MS.gene057563.t1 |
| chr7.2 | CDS | 85660281 | 85660522 | 85660281 | ID=cds.MS.gene057563.t1;Parent=MS.gene057563.t1 |
| chr7.2 | exon | 85661163 | 85661221 | 85661163 | ID=MS.gene057563.t1.exon3;Parent=MS.gene057563.t1 |
| chr7.2 | CDS | 85661163 | 85661221 | 85661163 | ID=cds.MS.gene057563.t1;Parent=MS.gene057563.t1 |
| chr7.2 | exon | 85661439 | 85661582 | 85661439 | ID=MS.gene057563.t1.exon4;Parent=MS.gene057563.t1 |
| chr7.2 | CDS | 85661439 | 85661582 | 85661439 | ID=cds.MS.gene057563.t1;Parent=MS.gene057563.t1 |
| chr7.2 | exon | 85661662 | 85661757 | 85661662 | ID=MS.gene057563.t1.exon5;Parent=MS.gene057563.t1 |
| chr7.2 | CDS | 85661662 | 85661757 | 85661662 | ID=cds.MS.gene057563.t1;Parent=MS.gene057563.t1 |
| chr7.2 | exon | 85661961 | 85662050 | 85661961 | ID=MS.gene057563.t1.exon6;Parent=MS.gene057563.t1 |
| chr7.2 | CDS | 85661961 | 85662050 | 85661961 | ID=cds.MS.gene057563.t1;Parent=MS.gene057563.t1 |
| Gene Sequence |
| Protein sequence |
