Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022311.t1 | XP_003601243.1 | 96.7 | 121 | 4 | 0 | 1 | 121 | 1 | 121 | 1.40E-58 | 235.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022311.t1 | Q8L8T2 | 68.6 | 118 | 36 | 1 | 1 | 117 | 1 | 118 | 4.9e-39 | 161.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022311.t1 | G7J5D8 | 96.7 | 121 | 4 | 0 | 1 | 121 | 1 | 121 | 1.0e-58 | 235.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022311.t1 | MTR_3g077570 | 96.694 | 121 | 4 | 0 | 1 | 121 | 1 | 121 | 1.59e-84 | 242 |
| MS.gene022311.t1 | MTR_3g077560 | 78.333 | 120 | 23 | 1 | 1 | 117 | 1 | 120 | 1.63e-66 | 197 |
| MS.gene022311.t1 | MTR_7g035245 | 64.762 | 105 | 37 | 0 | 17 | 121 | 2 | 106 | 8.22e-46 | 144 |
| MS.gene022311.t1 | MTR_1g069255 | 51.042 | 96 | 46 | 1 | 22 | 116 | 87 | 182 | 5.01e-27 | 99.0 |
| MS.gene022311.t1 | MTR_2g038560 | 47.059 | 85 | 45 | 0 | 27 | 111 | 37 | 121 | 1.55e-24 | 90.9 |
| MS.gene022311.t1 | MTR_2g038560 | 50.000 | 80 | 40 | 0 | 32 | 111 | 83 | 162 | 2.34e-24 | 91.7 |
| MS.gene022311.t1 | MTR_2g038560 | 50.000 | 80 | 40 | 0 | 32 | 111 | 86 | 165 | 2.46e-24 | 91.7 |
| MS.gene022311.t1 | MTR_5g021090 | 44.318 | 88 | 49 | 0 | 27 | 114 | 42 | 129 | 9.24e-21 | 81.3 |
| MS.gene022311.t1 | MTR_1g088905 | 37.000 | 100 | 63 | 0 | 18 | 117 | 1 | 100 | 1.64e-19 | 77.4 |
| MS.gene022311.t1 | MTR_2g019900 | 38.000 | 100 | 62 | 0 | 18 | 117 | 1 | 100 | 2.89e-19 | 76.6 |
| MS.gene022311.t1 | MTR_7g108250 | 37.000 | 100 | 63 | 0 | 18 | 117 | 1 | 100 | 4.56e-19 | 76.3 |
| MS.gene022311.t1 | MTR_7g022690 | 41.748 | 103 | 59 | 1 | 18 | 119 | 30 | 132 | 6.56e-19 | 76.6 |
| MS.gene022311.t1 | MTR_7g022550 | 41.748 | 103 | 59 | 1 | 18 | 119 | 30 | 132 | 9.48e-19 | 76.3 |
| MS.gene022311.t1 | MTR_7g022710 | 40.777 | 103 | 60 | 1 | 18 | 119 | 30 | 132 | 2.02e-18 | 75.5 |
| MS.gene022311.t1 | MTR_7g108220 | 37.624 | 101 | 62 | 1 | 18 | 117 | 1 | 101 | 7.78e-18 | 73.2 |
| MS.gene022311.t1 | MTR_2g048970 | 39.394 | 99 | 56 | 2 | 23 | 117 | 33 | 131 | 1.06e-17 | 73.6 |
| MS.gene022311.t1 | MTR_4g119050 | 36.893 | 103 | 64 | 1 | 18 | 119 | 1 | 103 | 3.02e-17 | 71.6 |
| MS.gene022311.t1 | MTR_4g119030 | 36.893 | 103 | 64 | 1 | 18 | 119 | 1 | 103 | 3.02e-17 | 71.6 |
| MS.gene022311.t1 | MTR_4g119040 | 36.893 | 103 | 64 | 1 | 18 | 119 | 1 | 103 | 3.02e-17 | 71.6 |
| MS.gene022311.t1 | MTR_7g108210 | 36.634 | 101 | 63 | 1 | 18 | 117 | 1 | 101 | 4.27e-17 | 71.2 |
| MS.gene022311.t1 | MTR_2g019950 | 34.314 | 102 | 67 | 0 | 18 | 119 | 1 | 102 | 7.00e-17 | 70.5 |
| MS.gene022311.t1 | MTR_1g088910 | 37.000 | 100 | 63 | 0 | 18 | 117 | 1 | 100 | 1.16e-16 | 70.1 |
| MS.gene022311.t1 | MTR_1g088925 | 34.737 | 95 | 62 | 0 | 18 | 112 | 1 | 95 | 2.43e-16 | 69.3 |
| MS.gene022311.t1 | MTR_1g088920 | 34.737 | 95 | 62 | 0 | 18 | 112 | 1 | 95 | 2.62e-16 | 68.9 |
| MS.gene022311.t1 | MTR_7g026770 | 38.679 | 106 | 64 | 1 | 13 | 117 | 17 | 122 | 2.64e-16 | 73.2 |
| MS.gene022311.t1 | MTR_5g077550 | 42.857 | 84 | 46 | 1 | 36 | 117 | 38 | 121 | 2.65e-16 | 69.7 |
| MS.gene022311.t1 | MTR_7g108260 | 36.000 | 100 | 64 | 0 | 18 | 117 | 1 | 100 | 2.69e-16 | 69.3 |
| MS.gene022311.t1 | MTR_1g088895 | 35.000 | 100 | 65 | 0 | 18 | 117 | 1 | 100 | 1.23e-14 | 65.1 |
| MS.gene022311.t1 | MTR_7g108200 | 32.979 | 94 | 63 | 0 | 18 | 111 | 1 | 94 | 7.65e-14 | 62.8 |
| MS.gene022311.t1 | MTR_2g014760 | 33.962 | 106 | 68 | 2 | 15 | 119 | 23 | 127 | 1.99e-13 | 62.4 |
| MS.gene022311.t1 | MTR_2g090755 | 35.897 | 117 | 71 | 2 | 7 | 119 | 24 | 140 | 3.98e-12 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022311.t1 | AT5G63030 | 68.644 | 118 | 36 | 1 | 1 | 117 | 1 | 118 | 8.09e-55 | 167 |
| MS.gene022311.t1 | AT5G40370 | 70.297 | 101 | 30 | 0 | 17 | 117 | 2 | 102 | 3.73e-49 | 152 |
| MS.gene022311.t1 | AT5G40370 | 69.767 | 86 | 26 | 0 | 32 | 117 | 42 | 127 | 3.50e-41 | 133 |
| MS.gene022311.t1 | AT5G20500 | 41.593 | 113 | 62 | 1 | 3 | 115 | 21 | 129 | 4.16e-26 | 95.1 |
| MS.gene022311.t1 | AT2G20270 | 49.474 | 95 | 47 | 1 | 21 | 114 | 78 | 172 | 6.78e-26 | 95.9 |
| MS.gene022311.t1 | AT1G77370 | 48.235 | 85 | 44 | 0 | 27 | 111 | 43 | 127 | 1.88e-23 | 88.2 |
| MS.gene022311.t1 | AT4G28730 | 41.748 | 103 | 58 | 2 | 14 | 114 | 65 | 167 | 2.51e-22 | 86.7 |
| MS.gene022311.t1 | AT2G20270 | 38.525 | 122 | 47 | 1 | 21 | 114 | 78 | 199 | 2.23e-21 | 85.1 |
| MS.gene022311.t1 | AT5G18600 | 39.000 | 100 | 61 | 0 | 18 | 117 | 1 | 100 | 7.46e-19 | 75.9 |
| MS.gene022311.t1 | AT1G03020 | 41.000 | 100 | 59 | 0 | 18 | 117 | 1 | 100 | 2.19e-18 | 74.7 |
| MS.gene022311.t1 | AT4G15700 | 39.216 | 102 | 62 | 0 | 18 | 119 | 1 | 102 | 2.90e-18 | 74.3 |
| MS.gene022311.t1 | AT3G02000 | 40.000 | 110 | 60 | 1 | 16 | 119 | 27 | 136 | 5.52e-18 | 74.3 |
| MS.gene022311.t1 | AT4G15680 | 37.255 | 102 | 64 | 0 | 18 | 119 | 1 | 102 | 1.05e-17 | 72.8 |
| MS.gene022311.t1 | AT1G77370 | 36.937 | 111 | 44 | 1 | 27 | 111 | 43 | 153 | 1.28e-17 | 73.9 |
| MS.gene022311.t1 | AT4G15670 | 36.275 | 102 | 65 | 0 | 18 | 119 | 1 | 102 | 1.46e-17 | 72.4 |
| MS.gene022311.t1 | AT3G62930 | 37.000 | 100 | 63 | 0 | 18 | 117 | 1 | 100 | 1.87e-17 | 72.0 |
| MS.gene022311.t1 | AT5G14070 | 38.889 | 108 | 58 | 1 | 20 | 119 | 33 | 140 | 2.66e-17 | 72.8 |
| MS.gene022311.t1 | AT3G62950 | 33.981 | 103 | 67 | 1 | 18 | 119 | 1 | 103 | 3.84e-17 | 71.2 |
| MS.gene022311.t1 | AT4G15690 | 37.255 | 102 | 64 | 0 | 18 | 119 | 1 | 102 | 4.36e-17 | 71.2 |
| MS.gene022311.t1 | AT3G21460 | 35.294 | 102 | 66 | 0 | 18 | 119 | 1 | 102 | 4.91e-17 | 71.2 |
| MS.gene022311.t1 | AT4G15660 | 36.275 | 102 | 65 | 0 | 18 | 119 | 1 | 102 | 7.74e-17 | 70.5 |
| MS.gene022311.t1 | AT2G47870 | 32.039 | 103 | 69 | 1 | 18 | 119 | 1 | 103 | 1.30e-15 | 67.4 |
| MS.gene022311.t1 | AT2G47880 | 33.000 | 100 | 67 | 0 | 18 | 117 | 1 | 100 | 1.93e-15 | 67.0 |
| MS.gene022311.t1 | AT4G33040 | 36.275 | 102 | 61 | 1 | 20 | 117 | 41 | 142 | 6.45e-15 | 66.6 |
| MS.gene022311.t1 | AT1G06830 | 33.684 | 95 | 63 | 0 | 18 | 112 | 1 | 95 | 7.87e-15 | 65.5 |
| MS.gene022311.t1 | AT3G62960 | 32.979 | 94 | 63 | 0 | 18 | 111 | 1 | 94 | 1.54e-14 | 64.7 |
| MS.gene022311.t1 | AT2G30540 | 34.343 | 99 | 65 | 0 | 18 | 116 | 1 | 99 | 2.22e-14 | 64.3 |
| MS.gene022311.t1 | AT4G28730 | 40.789 | 76 | 43 | 2 | 14 | 87 | 65 | 140 | 4.67e-14 | 64.3 |
| MS.gene022311.t1 | AT1G28480 | 31.429 | 105 | 66 | 2 | 20 | 119 | 34 | 137 | 6.02e-12 | 58.9 |
| MS.gene022311.t1 | AT5G11930 | 33.010 | 103 | 59 | 3 | 16 | 117 | 53 | 146 | 1.74e-11 | 57.8 |
Find 35 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATTTGTTTCAGCTGTTT+TGG | 0.209795 | 3.4:+74487878 | MS.gene022311:intron |
| ACAGTACCTAACGTGTTTAT+TGG | 0.289321 | 3.4:+74487534 | MS.gene022311:CDS |
| CTTATTGTGGTTACTGCAAT+CGG | 0.372327 | 3.4:+74485922 | MS.gene022311:CDS |
| TTTACCTATTTGAAGGTGAT+GGG | 0.404437 | 3.4:+74487469 | MS.gene022311:intron |
| GATCTCCTTAGCTTTGTTCA+TGG | 0.428147 | 3.4:-74484720 | None:intergenic |
| AGCCCACAAGGTCATTGAAT+TGG | 0.441001 | 3.4:+74485974 | MS.gene022311:CDS |
| GTTCCCCTTCTCAATGATGC+TGG | 0.442108 | 3.4:+74487924 | MS.gene022311:CDS |
| GTCCAATTCAATGACCTTGT+GGG | 0.442667 | 3.4:-74485976 | None:intergenic |
| GCAGCATTAGCTGAGTGGAC+AGG | 0.456852 | 3.4:+74487504 | MS.gene022311:CDS |
| GAAACACCGGACAGGTCAAT+TGG | 0.471409 | 3.4:+74487902 | MS.gene022311:CDS |
| TGTCCAATTCAATGACCTTG+TGG | 0.480738 | 3.4:-74485977 | None:intergenic |
| CAAGGATCTACTCAAACAGC+TGG | 0.497844 | 3.4:+74485947 | MS.gene022311:CDS |
| TTATTGTGGTTACTGCAATC+GGG | 0.524175 | 3.4:+74485923 | MS.gene022311:CDS |
| ATTGGAGGCAAGCACATTGG+TGG | 0.528449 | 3.4:+74487552 | MS.gene022311:CDS |
| TGCGAAGAGCAAAGAAGTGA+TGG | 0.537754 | 3.4:+74484691 | MS.gene022311:CDS |
| TTACCTATTTGAAGGTGATG+GGG | 0.538474 | 3.4:+74487470 | MS.gene022311:intron |
| CTATTAAGTGCTGAGCGGAA+TGG | 0.550121 | 3.4:-74487949 | None:intergenic |
| GGCTCCAGCATCATTGAGAA+GGG | 0.551797 | 3.4:-74487928 | None:intergenic |
| GGGGAACCAATTGACCTGTC+CGG | 0.552499 | 3.4:-74487908 | None:intergenic |
| TTGCCTCCAATAAACACGTT+AGG | 0.552854 | 3.4:-74487540 | None:intergenic |
| CAGCATTAGCTGAGTGGACA+GGG | 0.552955 | 3.4:+74487505 | MS.gene022311:CDS |
| TGGCTCCAGCATCATTGAGA+AGG | 0.568279 | 3.4:-74487929 | None:intergenic |
| TGGTTACTGCAATCGGGTCA+AGG | 0.573279 | 3.4:+74485929 | MS.gene022311:CDS |
| TAGCTGAGTGGACAGGGCAA+AGG | 0.577424 | 3.4:+74487511 | MS.gene022311:CDS |
| GTACCTAACGTGTTTATTGG+AGG | 0.577999 | 3.4:+74487537 | MS.gene022311:CDS |
| TTTATTGGAGGCAAGCACAT+TGG | 0.601349 | 3.4:+74487549 | MS.gene022311:CDS |
| GCGAAGAGCAAAGAAGTGAT+GGG | 0.601421 | 3.4:+74484692 | MS.gene022311:CDS |
| TACCTATTTGAAGGTGATGG+GGG | 0.603458 | 3.4:+74487471 | MS.gene022311:intron |
| AACTGCCATGAACAAAGCTA+AGG | 0.605066 | 3.4:+74484715 | MS.gene022311:CDS |
| TTCAAGCAGCATTAGCTGAG+TGG | 0.627494 | 3.4:+74487499 | MS.gene022311:CDS |
| TGTGGCAGTAAGACTTATTG+TGG | 0.633664 | 3.4:+74485909 | MS.gene022311:intron |
| ACAGCTGGGAGCAGCCCACA+AGG | 0.635312 | 3.4:+74485962 | MS.gene022311:CDS |
| AAGGATCTACTCAAACAGCT+GGG | 0.654980 | 3.4:+74485948 | MS.gene022311:CDS |
| GCTCCAGCATCATTGAGAAG+GGG | 0.665124 | 3.4:-74487927 | None:intergenic |
| TTTGGCTATTAAGTGCTGAG+CGG | 0.689501 | 3.4:-74487954 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTATTAAACACAAAAA+AGG | + | chr3.4:74485676-74485695 | MS.gene022311:intron | 10.0% |
| !! | AATTTATTAAACACAAAAAA+GGG | + | chr3.4:74485677-74485696 | MS.gene022311:intron | 10.0% |
| !!! | TATGATTAATATACTTTTAA+TGG | - | chr3.4:74486337-74486356 | None:intergenic | 10.0% |
| !!! | TTTAATAAATTTTGTTTGTT+TGG | - | chr3.4:74485668-74485687 | None:intergenic | 10.0% |
| !! | ATTTATTAAACACAAAAAAG+GGG | + | chr3.4:74485678-74485697 | MS.gene022311:intron | 15.0% |
| !!! | TTTTTAAGAAAATCAGTATT+TGG | + | chr3.4:74485066-74485085 | MS.gene022311:intron | 15.0% |
| !! | AAACATGAAATATATTGAGA+CGG | - | chr3.4:74486027-74486046 | None:intergenic | 20.0% |
| !! | AAACTAGTAATTAGTAACTA+AGG | - | chr3.4:74486482-74486501 | None:intergenic | 20.0% |
| !! | AAACTTAAAATATGTCTAAG+AGG | - | chr3.4:74486136-74486155 | None:intergenic | 20.0% |
| !! | ACAGAATTAATAATTTACCT+CGG | - | chr3.4:74486534-74486553 | None:intergenic | 20.0% |
| !! | ACGTTACAAAATGATTATTT+GGG | - | chr3.4:74487033-74487052 | None:intergenic | 20.0% |
| !! | ATCTTATGGTATATTATTGA+TGG | - | chr3.4:74486637-74486656 | None:intergenic | 20.0% |
| !! | ATCTTGTGATATATTATTGA+TGG | + | chr3.4:74487279-74487298 | MS.gene022311:intron | 20.0% |
| !! | TAAAAAAATGAACTGATTGT+GGG | + | chr3.4:74484833-74484852 | MS.gene022311:intron | 20.0% |
| !! | TACGTTACAAAATGATTATT+TGG | - | chr3.4:74487034-74487053 | None:intergenic | 20.0% |
| !! | TAGAAAATGAAAAAGAAGAA+AGG | + | chr3.4:74486210-74486229 | MS.gene022311:intron | 20.0% |
| !! | TTAAAAAAATGAACTGATTG+TGG | + | chr3.4:74484832-74484851 | MS.gene022311:intron | 20.0% |
| !! | TTCTCTTATATAATATAGGT+TGG | + | chr3.4:74485274-74485293 | MS.gene022311:intron | 20.0% |
| !!! | AACAATAAAAACTCTAGTTT+TGG | - | chr3.4:74487626-74487645 | None:intergenic | 20.0% |
| !!! | ATATCACAAGATCTATTTTA+GGG | - | chr3.4:74487271-74487290 | None:intergenic | 20.0% |
| !!! | ATTTTCACAATAAAAACTCA+CGG | + | chr3.4:74485542-74485561 | MS.gene022311:intron | 20.0% |
| !!! | GAGTTTTTATTGTGAAAATT+GGG | - | chr3.4:74485541-74485560 | None:intergenic | 20.0% |
| !!! | TATATCACAAGATCTATTTT+AGG | - | chr3.4:74487272-74487291 | None:intergenic | 20.0% |
| !!! | TATTGGCTATTATTTCTATA+GGG | - | chr3.4:74485753-74485772 | None:intergenic | 20.0% |
| !!! | TCATTTTGTAACGTAAATAA+TGG | + | chr3.4:74487039-74487058 | MS.gene022311:intron | 20.0% |
| !!! | TGAGTTTTTATTGTGAAAAT+TGG | - | chr3.4:74485542-74485561 | None:intergenic | 20.0% |
| !!! | TTATTGGCTATTATTTCTAT+AGG | - | chr3.4:74485754-74485773 | None:intergenic | 20.0% |
| !!! | TTGTCATAACATTATTTTGA+GGG | + | chr3.4:74486568-74486587 | MS.gene022311:intron | 20.0% |
| ! | AAAAAAATGAACTGATTGTG+GGG | + | chr3.4:74484834-74484853 | MS.gene022311:intron | 25.0% |
| ! | AAAATCTGATTGGAAATGAA+CGG | - | chr3.4:74486830-74486849 | None:intergenic | 25.0% |
| ! | AAACCTTCAAATAGATCTTA+TGG | - | chr3.4:74486651-74486670 | None:intergenic | 25.0% |
| ! | AAATAATAGCCAATAAAAGC+GGG | + | chr3.4:74485758-74485777 | MS.gene022311:intron | 25.0% |
| ! | AACAAACAAAGACCTAAAAA+GGG | - | chr3.4:74486107-74486126 | None:intergenic | 25.0% |
| ! | AACAATGAACTCAAAATATG+TGG | - | chr3.4:74487345-74487364 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | - | chr3.4:74487708-74487727 | None:intergenic | 25.0% |
| ! | ATACCATAAGATCTATTTGA+AGG | + | chr3.4:74486645-74486664 | MS.gene022311:intron | 25.0% |
| ! | ATTTCCAATTAAATCCAAAG+TGG | + | chr3.4:74487421-74487440 | MS.gene022311:intron | 25.0% |
| ! | CACAACATAAATTACAGAAT+GGG | - | chr3.4:74485888-74485907 | None:intergenic | 25.0% |
| ! | CATGCAATACAAAAATTTGA+AGG | + | chr3.4:74486945-74486964 | MS.gene022311:intron | 25.0% |
| ! | GAAAATCTTGAATCAGTATT+TGG | + | chr3.4:74484967-74484986 | MS.gene022311:intron | 25.0% |
| ! | GAAATAATAGCCAATAAAAG+CGG | + | chr3.4:74485757-74485776 | MS.gene022311:intron | 25.0% |
| ! | GAACGGATAAAAAAAAAATG+AGG | - | chr3.4:74486813-74486832 | None:intergenic | 25.0% |
| ! | GATAAAAAAAAAATGAGGAG+GGG | - | chr3.4:74486808-74486827 | None:intergenic | 25.0% |
| ! | GATTCAAGAAAATCAGTATT+TGG | - | chr3.4:74485162-74485181 | None:intergenic | 25.0% |
| ! | GGATAAAAAAAAAATGAGGA+GGG | - | chr3.4:74486809-74486828 | None:intergenic | 25.0% |
| ! | GTTATGCTCTTTAATGAAAA+GGG | + | chr3.4:74485190-74485209 | MS.gene022311:intron | 25.0% |
| ! | TAACAAACAAAGACCTAAAA+AGG | - | chr3.4:74486108-74486127 | None:intergenic | 25.0% |
| ! | TGTTATGCTCTTTAATGAAA+AGG | + | chr3.4:74485189-74485208 | MS.gene022311:intron | 25.0% |
| ! | TTTCCAATTAAATCCAAAGT+GGG | + | chr3.4:74487422-74487441 | MS.gene022311:intron | 25.0% |
| ! | TTTGTATTGCATGAAATTCT+TGG | - | chr3.4:74486938-74486957 | None:intergenic | 25.0% |
| !! | AATTACCAGTATGATTGTTT+TGG | + | chr3.4:74486868-74486887 | MS.gene022311:intron | 25.0% |
| !! | ATATATTATTGATGGTACAC+CGG | + | chr3.4:74487287-74487306 | MS.gene022311:intron | 25.0% |
| !! | ATTCTTGGATTTTATGGATT+TGG | - | chr3.4:74486923-74486942 | None:intergenic | 25.0% |
| !! | ATTTTCATGTGTAAAGTACA+TGG | + | chr3.4:74485581-74485600 | MS.gene022311:intron | 25.0% |
| !! | CATGAAATTCTTGGATTTTA+TGG | - | chr3.4:74486929-74486948 | None:intergenic | 25.0% |
| !! | GATTTTCTTGAATCAGTATT+TGG | + | chr3.4:74485000-74485019 | MS.gene022311:intron | 25.0% |
| !! | TAAGTTTTCCAATTTCACTT+GGG | + | chr3.4:74486149-74486168 | MS.gene022311:intron | 25.0% |
| !! | TATTTCTATAGGGACTTATT+AGG | - | chr3.4:74485743-74485762 | None:intergenic | 25.0% |
| !! | TTAAGTTTTCCAATTTCACT+TGG | + | chr3.4:74486148-74486167 | MS.gene022311:intron | 25.0% |
| !! | TTTATTTGTTTCAGCTGTTT+TGG | + | chr3.4:74487878-74487897 | MS.gene022311:intron | 25.0% |
| !! | TTTTCATGTGTAAAGTACAT+GGG | + | chr3.4:74485582-74485601 | MS.gene022311:intron | 25.0% |
| !!! | AACCACTTTTTGACAATTTT+TGG | - | chr3.4:74487805-74487824 | None:intergenic | 25.0% |
| !!! | ATTTTTTGTTTTCCCGTATA+CGG | - | chr3.4:74486250-74486269 | None:intergenic | 25.0% |
| !!! | CTTGTCATAACATTATTTTG+AGG | + | chr3.4:74486567-74486586 | MS.gene022311:intron | 25.0% |
| !!! | TACTCCTTTAGAATCAATTT+CGG | + | chr3.4:74485424-74485443 | MS.gene022311:intron | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | + | chr3.4:74487707-74487726 | MS.gene022311:intron | 25.0% |
| AATACAAAATCTCCGTATAC+GGG | + | chr3.4:74486235-74486254 | MS.gene022311:intron | 30.0% | |
| AATCCTCAACAAAATCTGAT+TGG | - | chr3.4:74486840-74486859 | None:intergenic | 30.0% | |
| ACAAACAAAGACCTAAAAAG+GGG | - | chr3.4:74486106-74486125 | None:intergenic | 30.0% | |
| ACATTCAAGAAAATCGTTAG+GGG | - | chr3.4:74484894-74484913 | None:intergenic | 30.0% | |
| AGAAAACCTGAAGACAAAAA+CGG | - | chr3.4:74484759-74484778 | None:intergenic | 30.0% | |
| AGACATTCAAGAAAATCGTT+AGG | - | chr3.4:74484896-74484915 | None:intergenic | 30.0% | |
| ATCTCATGTATGCATTGAAT+TGG | + | chr3.4:74485813-74485832 | MS.gene022311:intron | 30.0% | |
| CCACAACATAAATTACAGAA+TGG | - | chr3.4:74485889-74485908 | None:intergenic | 30.0% | |
| CCAGATCAACTAATCATAAA+CGG | + | chr3.4:74486506-74486525 | MS.gene022311:intron | 30.0% | |
| CCATTCTGTAATTTATGTTG+TGG | + | chr3.4:74485886-74485905 | MS.gene022311:intron | 30.0% | |
| CGGATAAAAAAAAAATGAGG+AGG | - | chr3.4:74486810-74486829 | None:intergenic | 30.0% | |
| CGGGAAAACAAAAAATGTAT+TGG | + | chr3.4:74486254-74486273 | MS.gene022311:intron | 30.0% | |
| GAATACAAAATCTCCGTATA+CGG | + | chr3.4:74486234-74486253 | MS.gene022311:intron | 30.0% | |
| GACATTCAAGAAAATCGTTA+GGG | - | chr3.4:74484895-74484914 | None:intergenic | 30.0% | |
| GGGGTTCTCTTATATAATAT+AGG | + | chr3.4:74485270-74485289 | MS.gene022311:intron | 30.0% | |
| GTCCAAAAATTGTCAAAAAG+TGG | + | chr3.4:74487800-74487819 | MS.gene022311:intron | 30.0% | |
| TAACTAGAATTTGCAGCTAT+TGG | - | chr3.4:74485335-74485354 | None:intergenic | 30.0% | |
| TATTGGTAGAAGACTTTAGA+GGG | + | chr3.4:74486271-74486290 | MS.gene022311:intron | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | - | chr3.4:74487682-74487701 | None:intergenic | 30.0% | |
| TTCCAATTAAATCCAAAGTG+GGG | + | chr3.4:74487423-74487442 | MS.gene022311:intron | 30.0% | |
| TTCTTATTGGTCAAAAGCAA+TGG | + | chr3.4:74487720-74487739 | MS.gene022311:intron | 30.0% | |
| TTTACCTATTTGAAGGTGAT+GGG | + | chr3.4:74487469-74487488 | MS.gene022311:intron | 30.0% | |
| ! | AAACAGATTTTTATACGCAC+TGG | + | chr3.4:74486981-74487000 | MS.gene022311:intron | 30.0% |
| ! | GTATATTATTGATGGTACAC+CGG | - | chr3.4:74486629-74486648 | None:intergenic | 30.0% |
| ! | GTTTTGCTGGAAAAAACAAA+GGG | + | chr3.4:74487192-74487211 | MS.gene022311:intron | 30.0% |
| ! | TCAGAAGTAAGAGTTTTTCA+TGG | + | chr3.4:74487068-74487087 | MS.gene022311:intron | 30.0% |
| ! | TCTAACATAAAAGGTTTTGC+TGG | + | chr3.4:74487179-74487198 | MS.gene022311:intron | 30.0% |
| ! | TTTCCAATCAGATTTTGTTG+AGG | + | chr3.4:74486834-74486853 | MS.gene022311:intron | 30.0% |
| ! | TTTTACCTATTTGAAGGTGA+TGG | + | chr3.4:74487468-74487487 | MS.gene022311:intron | 30.0% |
| ! | TTTTCCAAAAGTTGAATGTG+AGG | + | chr3.4:74486063-74486082 | MS.gene022311:intron | 30.0% |
| !! | TTTGTCTTTTTCACAAAGCA+CGG | - | chr3.4:74487391-74487410 | None:intergenic | 30.0% |
| !!! | AGATCTATTTTAGGGTAGAT+TGG | - | chr3.4:74487263-74487282 | None:intergenic | 30.0% |
| !!! | TCATAACATTATTTTGAGGG+TGG | + | chr3.4:74486571-74486590 | MS.gene022311:intron | 30.0% |
| !!! | TGCTGTTTTTACCTATTTGA+AGG | + | chr3.4:74487462-74487481 | MS.gene022311:intron | 30.0% |
| AAAAAACAAAGGGCAGGAAT+TGG | + | chr3.4:74487202-74487221 | MS.gene022311:intron | 35.0% | |
| AAAAACAAAGGGCAGGAATT+GGG | + | chr3.4:74487203-74487222 | MS.gene022311:intron | 35.0% | |
| AAAAAGGGGTTACAAAGGAT+TGG | + | chr3.4:74485692-74485711 | MS.gene022311:intron | 35.0% | |
| AAAAAGTAGCTAAAGGAGTG+TGG | - | chr3.4:74487592-74487611 | None:intergenic | 35.0% | |
| AAAACAGCTAAGTGTGTGTT+AGG | - | chr3.4:74485636-74485655 | None:intergenic | 35.0% | |
| AAAACCTGAAGACAAAAACG+GGG | - | chr3.4:74484757-74484776 | None:intergenic | 35.0% | |
| AAAAGGGGTTACAAAGGATT+GGG | + | chr3.4:74485693-74485712 | MS.gene022311:intron | 35.0% | |
| AAACATAGCCCAAGTGAAAT+TGG | - | chr3.4:74486160-74486179 | None:intergenic | 35.0% | |
| AATGAAAAGAAGAGTGGGAT+TGG | - | chr3.4:74486719-74486738 | None:intergenic | 35.0% | |
| AATTTCACTTGGGCTATGTT+TGG | + | chr3.4:74486159-74486178 | MS.gene022311:intron | 35.0% | |
| ACACAAAAAAGGGGTTACAA+AGG | + | chr3.4:74485687-74485706 | MS.gene022311:intron | 35.0% | |
| ACAGTACCTAACGTGTTTAT+TGG | + | chr3.4:74487534-74487553 | MS.gene022311:CDS | 35.0% | |
| ACCTCACTGTCTAACATAAA+AGG | + | chr3.4:74487170-74487189 | MS.gene022311:intron | 35.0% | |
| AGAGAGAAAAAGAAAGAGAG+AGG | + | chr3.4:74487743-74487762 | MS.gene022311:intron | 35.0% | |
| ATAATACTAGATCCCCACTT+TGG | - | chr3.4:74487438-74487457 | None:intergenic | 35.0% | |
| ATAATATCCCTCCTCATGTT+GGG | + | chr3.4:74487122-74487141 | MS.gene022311:intron | 35.0% | |
| ATCCCCACTTTGGATTTAAT+TGG | - | chr3.4:74487428-74487447 | None:intergenic | 35.0% | |
| ATGAAAAGAAGAGTGGGATT+GGG | - | chr3.4:74486718-74486737 | None:intergenic | 35.0% | |
| ATTTCACTTGGGCTATGTTT+GGG | + | chr3.4:74486160-74486179 | MS.gene022311:intron | 35.0% | |
| CCTCATGAAAAAGTAGCTAA+AGG | - | chr3.4:74487599-74487618 | None:intergenic | 35.0% | |
| CTCAAAATATGTGGCTTCTA+AGG | - | chr3.4:74487336-74487355 | None:intergenic | 35.0% | |
| CTGTAATTTATGTTGTGGTG+TGG | + | chr3.4:74485891-74485910 | MS.gene022311:intron | 35.0% | |
| CTTATTGTGGTTACTGCAAT+CGG | + | chr3.4:74485922-74485941 | MS.gene022311:CDS | 35.0% | |
| GAAAACCTGAAGACAAAAAC+GGG | - | chr3.4:74484758-74484777 | None:intergenic | 35.0% | |
| GACATGTTTGAATGTTCTTG+AGG | - | chr3.4:74485393-74485412 | None:intergenic | 35.0% | |
| GATGACCAAAACAATCATAC+TGG | - | chr3.4:74486876-74486895 | None:intergenic | 35.0% | |
| TATAGGGACTTATTAGGCAT+TGG | - | chr3.4:74485737-74485756 | None:intergenic | 35.0% | |
| TGGTGTGTCTTAAAAATCAC+TGG | + | chr3.4:74485086-74485105 | MS.gene022311:intron | 35.0% | |
| TTACCTATTTGAAGGTGATG+GGG | + | chr3.4:74487470-74487489 | MS.gene022311:intron | 35.0% | |
| TTATTGTGGTTACTGCAATC+GGG | + | chr3.4:74485923-74485942 | MS.gene022311:CDS | 35.0% | |
| ! | AATTTCGGCTTCTCTAAAAG+TGG | + | chr3.4:74485439-74485458 | MS.gene022311:intron | 35.0% |
| ! | ACCTTTTATGTTAGACAGTG+AGG | - | chr3.4:74487174-74487193 | None:intergenic | 35.0% |
| ! | CCGTTTATGATTAGTTGATC+TGG | - | chr3.4:74486509-74486528 | None:intergenic | 35.0% |
| ! | GAAGCCGAAATTGATTCTAA+AGG | - | chr3.4:74485431-74485450 | None:intergenic | 35.0% |
| ! | GGTTTTGCTGGAAAAAACAA+AGG | + | chr3.4:74487191-74487210 | MS.gene022311:intron | 35.0% |
| ! | GTATTGGTAGAAGACTTTAG+AGG | + | chr3.4:74486270-74486289 | MS.gene022311:intron | 35.0% |
| ! | TAGTCCTCACATTCAACTTT+TGG | - | chr3.4:74486070-74486089 | None:intergenic | 35.0% |
| !! | TTGTTTTGTTGCCCCTTTTT+AGG | + | chr3.4:74486092-74486111 | MS.gene022311:intron | 35.0% |
| !!! | CAGTGATTTTTAGGGTTTAG+GGG | + | chr3.4:74484861-74484880 | MS.gene022311:intron | 35.0% |
| !!! | CCAGTGATTTTTAGGGTTTA+GGG | + | chr3.4:74484860-74484879 | MS.gene022311:intron | 35.0% |
| !!! | CCTTTAGCTACTTTTTCATG+AGG | + | chr3.4:74487596-74487615 | MS.gene022311:intron | 35.0% |
| AAAAAAATGAGGAGGGGTGA+TGG | - | chr3.4:74486802-74486821 | None:intergenic | 40.0% | |
| AAACCTGAAGACAAAAACGG+GGG | - | chr3.4:74484756-74484775 | None:intergenic | 40.0% | |
| AACTGCCATGAACAAAGCTA+AGG | + | chr3.4:74484715-74484734 | MS.gene022311:CDS | 40.0% | |
| AAGGATCTACTCAAACAGCT+GGG | + | chr3.4:74485948-74485967 | MS.gene022311:CDS | 40.0% | |
| AGGAGGGATATTATGAACCT+TGG | - | chr3.4:74487116-74487135 | None:intergenic | 40.0% | |
| ATTGTAAGGAACCCAACATG+AGG | - | chr3.4:74487136-74487155 | None:intergenic | 40.0% | |
| CATAATATCCCTCCTCATGT+TGG | + | chr3.4:74487121-74487140 | MS.gene022311:intron | 40.0% | |
| CCCTAAACCCTAAAAATCAC+TGG | - | chr3.4:74484863-74484882 | None:intergenic | 40.0% | |
| CCGGAAATGAAAAGAAGAGT+GGG | - | chr3.4:74486724-74486743 | None:intergenic | 40.0% | |
| CTCTTTAATGAAAAGGGACG+TGG | + | chr3.4:74485196-74485215 | MS.gene022311:intron | 40.0% | |
| GTACCTAACGTGTTTATTGG+AGG | + | chr3.4:74487537-74487556 | MS.gene022311:CDS | 40.0% | |
| GTCCAATTCAATGACCTTGT+GGG | - | chr3.4:74485979-74485998 | None:intergenic | 40.0% | |
| TAAGCTCAGTTTGAGAGGTT+TGG | - | chr3.4:74486441-74486460 | None:intergenic | 40.0% | |
| TCATCGGCAATTCCATTGTA+AGG | - | chr3.4:74487150-74487169 | None:intergenic | 40.0% | |
| TCATGTTGGGTTCCTTACAA+TGG | + | chr3.4:74487135-74487154 | MS.gene022311:intron | 40.0% | |
| TGTCCAATTCAATGACCTTG+TGG | - | chr3.4:74485980-74485999 | None:intergenic | 40.0% | |
| TGTGGCAGTAAGACTTATTG+TGG | + | chr3.4:74485909-74485928 | MS.gene022311:intron | 40.0% | |
| TGTTAGACAGTGAGGTTCAT+CGG | - | chr3.4:74487166-74487185 | None:intergenic | 40.0% | |
| TTGCCTCCAATAAACACGTT+AGG | - | chr3.4:74487543-74487562 | None:intergenic | 40.0% | |
| TTTATTGGAGGCAAGCACAT+TGG | + | chr3.4:74487549-74487568 | MS.gene022311:CDS | 40.0% | |
| TTTGCACAATTCTGCTTCCA+AGG | + | chr3.4:74487096-74487115 | MS.gene022311:intron | 40.0% | |
| ! | CATTGGTGGTTGTGATTGTA+AGG | + | chr3.4:74487566-74487585 | MS.gene022311:intron | 40.0% |
| ! | CCCACTCTTCTTTTCATTTC+CGG | + | chr3.4:74486721-74486740 | MS.gene022311:intron | 40.0% |
| ! | TACCTATTTGAAGGTGATGG+GGG | + | chr3.4:74487471-74487490 | MS.gene022311:intron | 40.0% |
| !! | AATATGTGGCTTCTAAGGTG+AGG | - | chr3.4:74487331-74487350 | None:intergenic | 40.0% |
| !! | ACTTGTTGTCTTTCACACGT+AGG | + | chr3.4:74485847-74485866 | MS.gene022311:intron | 40.0% |
| !! | ATATGTGGCTTCTAAGGTGA+GGG | - | chr3.4:74487330-74487349 | None:intergenic | 40.0% |
| !! | GATCTCCTTAGCTTTGTTCA+TGG | - | chr3.4:74484723-74484742 | None:intergenic | 40.0% |
| !!! | CTATGTTTGGGAGTTTTGGA+GGG | + | chr3.4:74486172-74486191 | MS.gene022311:intron | 40.0% |
| !!! | GCCAGTGATTTTTAGGGTTT+AGG | + | chr3.4:74484859-74484878 | MS.gene022311:intron | 40.0% |
| AAAAGAAGAGTGGGATTGGG+TGG | - | chr3.4:74486715-74486734 | None:intergenic | 45.0% | |
| AAAGAAGAGTGGGATTGGGT+GGG | - | chr3.4:74486714-74486733 | None:intergenic | 45.0% | |
| ACGAAGGCTGAGTGTATGTT+TGG | - | chr3.4:74485467-74485486 | None:intergenic | 45.0% | |
| AGCCCACAAGGTCATTGAAT+TGG | + | chr3.4:74485974-74485993 | MS.gene022311:CDS | 45.0% | |
| CAAGGATCTACTCAAACAGC+TGG | + | chr3.4:74485947-74485966 | MS.gene022311:CDS | 45.0% | |
| CAATGTAAACACGCACGTGT+TGG | + | chr3.4:74485219-74485238 | MS.gene022311:intron | 45.0% | |
| CCATGTTCTCATCCACTCAT+CGG | + | chr3.4:74486753-74486772 | MS.gene022311:intron | 45.0% | |
| GAGAACATGGAAGAGTTTGC+CGG | - | chr3.4:74486743-74486762 | None:intergenic | 45.0% | |
| GCAAGTAAGCTCAGTTTGAG+AGG | - | chr3.4:74486446-74486465 | None:intergenic | 45.0% | |
| GCCGGAAATGAAAAGAAGAG+TGG | - | chr3.4:74486725-74486744 | None:intergenic | 45.0% | |
| GCGAAGAGCAAAGAAGTGAT+GGG | + | chr3.4:74484692-74484711 | MS.gene022311:CDS | 45.0% | |
| GGAGCAATTAAATCCCTCAC+CGG | - | chr3.4:74487309-74487328 | None:intergenic | 45.0% | |
| TAAGGAACCCAACATGAGGA+GGG | - | chr3.4:74487132-74487151 | None:intergenic | 45.0% | |
| TACGTCGTGTTTCGAAACGA+AGG | - | chr3.4:74485483-74485502 | None:intergenic | 45.0% | |
| TCAGTTTGAGAGGTTTGGAG+AGG | - | chr3.4:74486436-74486455 | None:intergenic | 45.0% | |
| TGCGAAGAGCAAAGAAGTGA+TGG | + | chr3.4:74484691-74484710 | MS.gene022311:CDS | 45.0% | |
| TGCTGGAAAAAACAAAGGGC+AGG | + | chr3.4:74487196-74487215 | MS.gene022311:intron | 45.0% | |
| TTCAAGCAGCATTAGCTGAG+TGG | + | chr3.4:74487499-74487518 | MS.gene022311:CDS | 45.0% | |
| ! | ACTAATCATAAACGGTGCCG+AGG | + | chr3.4:74486514-74486533 | MS.gene022311:intron | 45.0% |
| ! | GGGGATGCCAGTGATTTTTA+GGG | + | chr3.4:74484853-74484872 | MS.gene022311:intron | 45.0% |
| ! | TATTGATGGTACACCGGTGA+GGG | + | chr3.4:74487293-74487312 | MS.gene022311:intron | 45.0% |
| ! | TATTGATGGTACACCGGTGA+GGG | - | chr3.4:74487312-74487293 | None:intergenic | 45.0% |
| ! | TGGGCTATGTTTGGGAGTTT+TGG | + | chr3.4:74486168-74486187 | MS.gene022311:intron | 45.0% |
| ! | TGGGGATGCCAGTGATTTTT+AGG | + | chr3.4:74484852-74484871 | MS.gene022311:intron | 45.0% |
| ! | TTATTGATGGTACACCGGTG+AGG | + | chr3.4:74487292-74487311 | MS.gene022311:intron | 45.0% |
| ! | TTATTGATGGTACACCGGTG+AGG | - | chr3.4:74487311-74487292 | None:intergenic | 45.0% |
| !! | AGCTAAGTGCCCGCTTTTAT+TGG | - | chr3.4:74485770-74485789 | None:intergenic | 45.0% |
| !! | GCTATGTTTGGGAGTTTTGG+AGG | + | chr3.4:74486171-74486190 | MS.gene022311:intron | 45.0% |
| !!! | CAGCTGTTTTGGAGAAACAC+CGG | + | chr3.4:74487889-74487908 | MS.gene022311:intron | 45.0% |
| AAAGCGGGCACTTAGCTGTT+AGG | + | chr3.4:74485773-74485792 | MS.gene022311:intron | 50.0% | |
| AACAAAGGGCAGGAATTGGG+TGG | + | chr3.4:74487206-74487225 | MS.gene022311:intron | 50.0% | |
| AAGAAGAGTGGGATTGGGTG+GGG | - | chr3.4:74486713-74486732 | None:intergenic | 50.0% | |
| AATTGGGTGGGTCAAGGCAT+AGG | + | chr3.4:74487219-74487238 | MS.gene022311:intron | 50.0% | |
| ACAAAGGGCAGGAATTGGGT+GGG | + | chr3.4:74487207-74487226 | MS.gene022311:intron | 50.0% | |
| AGGGGTTACAAAGGATTGGG+TGG | + | chr3.4:74485696-74485715 | MS.gene022311:intron | 50.0% | |
| ATCTTCTTGCCTCCGATGAG+TGG | - | chr3.4:74486768-74486787 | None:intergenic | 50.0% | |
| ATTGGAGGCAAGCACATTGG+TGG | + | chr3.4:74487552-74487571 | MS.gene022311:CDS | 50.0% | |
| CACCCCCATCACCTTCAAAT+AGG | - | chr3.4:74487476-74487495 | None:intergenic | 50.0% | |
| CAGCATTAGCTGAGTGGACA+GGG | + | chr3.4:74487505-74487524 | MS.gene022311:CDS | 50.0% | |
| CCACAATCAGTGCTTCTGTG+TGG | - | chr3.4:74485515-74485534 | None:intergenic | 50.0% | |
| CCGATGAGTGGATGAGAACA+TGG | - | chr3.4:74486756-74486775 | None:intergenic | 50.0% | |
| GAAACACCGGACAGGTCAAT+TGG | + | chr3.4:74487902-74487921 | MS.gene022311:CDS | 50.0% | |
| GACAAAAACGGGGGATGAAG+CGG | - | chr3.4:74484747-74484766 | None:intergenic | 50.0% | |
| GCTCCAGCATCATTGAGAAG+GGG | - | chr3.4:74487930-74487949 | None:intergenic | 50.0% | |
| GGAGTAATCAAGTCCCTCAC+CGG | + | chr3.4:74486607-74486626 | MS.gene022311:intron | 50.0% | |
| GGCTCCAGCATCATTGAGAA+GGG | - | chr3.4:74487931-74487950 | None:intergenic | 50.0% | |
| GGGGTTACAAAGGATTGGGT+GGG | + | chr3.4:74485697-74485716 | MS.gene022311:intron | 50.0% | |
| GGGTTACAAAGGATTGGGTG+GGG | + | chr3.4:74485698-74485717 | MS.gene022311:intron | 50.0% | |
| GTAAGGAACCCAACATGAGG+AGG | - | chr3.4:74487133-74487152 | None:intergenic | 50.0% | |
| GTTCCCCTTCTCAATGATGC+TGG | + | chr3.4:74487924-74487943 | MS.gene022311:CDS | 50.0% | |
| GTTTGAGAGGTTTGGAGAGG+AGG | - | chr3.4:74486433-74486452 | None:intergenic | 50.0% | |
| TACAAAGGATTGGGTGGGGT+GGG | + | chr3.4:74485702-74485721 | MS.gene022311:intron | 50.0% | |
| TGAGGGTGGCTTCTAAGTTG+AGG | + | chr3.4:74486585-74486604 | MS.gene022311:intron | 50.0% | |
| TGGCTCCAGCATCATTGAGA+AGG | - | chr3.4:74487932-74487951 | None:intergenic | 50.0% | |
| TGGTTACTGCAATCGGGTCA+AGG | + | chr3.4:74485929-74485948 | MS.gene022311:CDS | 50.0% | |
| TGTCCAAGCGTTTGACGCTA+GGG | + | chr3.4:74485250-74485269 | MS.gene022311:intron | 50.0% | |
| TGTTCTCATCCACTCATCGG+AGG | + | chr3.4:74486756-74486775 | MS.gene022311:intron | 50.0% | |
| TTACAAAGGATTGGGTGGGG+TGG | + | chr3.4:74485701-74485720 | MS.gene022311:intron | 50.0% | |
| ! | GAGGGTGGCTTCTAAGTTGA+GGG | + | chr3.4:74486586-74486605 | MS.gene022311:intron | 50.0% |
| ! | GTAAACACGCACGTGTTGGT+TGG | + | chr3.4:74485223-74485242 | MS.gene022311:intron | 50.0% |
| !! | CATCCCCCGTTTTTGTCTTC+AGG | + | chr3.4:74484750-74484769 | MS.gene022311:CDS | 50.0% |
| !! | CCACACAGAAGCACTGATTG+TGG | + | chr3.4:74485512-74485531 | MS.gene022311:intron | 50.0% |
| !!! | GTTTGGGAGTTTTGGAGGGA+AGG | + | chr3.4:74486176-74486195 | MS.gene022311:intron | 50.0% |
| !!! | GTTTTGGAGAAACACCGGAC+AGG | + | chr3.4:74487894-74487913 | MS.gene022311:CDS | 50.0% |
| AACCCCTAGCGTCAAACGCT+TGG | - | chr3.4:74485256-74485275 | None:intergenic | 55.0% | |
| ACAAAGGATTGGGTGGGGTG+GGG | + | chr3.4:74485703-74485722 | MS.gene022311:intron | 55.0% | |
| AGGTTTGGAGAGGAGGAGAG+AGG | - | chr3.4:74486426-74486445 | None:intergenic | 55.0% | |
| AGTGCTTCTGTGTGGACGTC+AGG | - | chr3.4:74485507-74485526 | None:intergenic | 55.0% | |
| GCAGCATTAGCTGAGTGGAC+AGG | + | chr3.4:74487504-74487523 | MS.gene022311:CDS | 55.0% | |
| GGGGAACCAATTGACCTGTC+CGG | - | chr3.4:74487911-74487930 | None:intergenic | 55.0% | |
| GGTTTGGAGAGGAGGAGAGA+GGG | - | chr3.4:74486425-74486444 | None:intergenic | 55.0% | |
| GTCCAAGCGTTTGACGCTAG+GGG | + | chr3.4:74485251-74485270 | MS.gene022311:intron | 55.0% | |
| GTGTCCAAGCGTTTGACGCT+AGG | + | chr3.4:74485249-74485268 | MS.gene022311:intron | 55.0% | |
| GTTTGGAGAGGAGGAGAGAG+GGG | - | chr3.4:74486424-74486443 | None:intergenic | 55.0% | |
| TAGCTGAGTGGACAGGGCAA+AGG | + | chr3.4:74487511-74487530 | MS.gene022311:CDS | 55.0% | |
| AAAGGATTGGGTGGGGTGGG+GGG | + | chr3.4:74485705-74485724 | MS.gene022311:intron | 60.0% | |
| CAAAGGATTGGGTGGGGTGG+GGG | + | chr3.4:74485704-74485723 | MS.gene022311:intron | 60.0% | |
| GATTGGGTGGGGCAAGGCAT+AGG | - | chr3.4:74486702-74486721 | None:intergenic | 60.0% | |
| GGCAGGAATTGGGTGGGTCA+AGG | + | chr3.4:74487213-74487232 | MS.gene022311:intron | 60.0% | |
| ! | ATGAGGAGGGGTGATGGCGA+AGG | - | chr3.4:74486796-74486815 | None:intergenic | 60.0% |
| AAGGATTGGGTGGGGTGGGG+GGG | + | chr3.4:74485706-74485725 | MS.gene022311:intron | 65.0% | |
| ACAGCTGGGAGCAGCCCACA+AGG | + | chr3.4:74485962-74485981 | MS.gene022311:CDS | 65.0% | |
| GAGTGGGATTGGGTGGGGCA+AGG | - | chr3.4:74486708-74486727 | None:intergenic | 65.0% | |
| TGGAGAGGAGGAGAGAGGGG+AGG | - | chr3.4:74486421-74486440 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 74484671 | 74487968 | 74484671 | ID=MS.gene022311 |
| chr3.4 | mRNA | 74484671 | 74487968 | 74484671 | ID=MS.gene022311.t1;Parent=MS.gene022311 |
| chr3.4 | exon | 74484671 | 74484771 | 74484671 | ID=MS.gene022311.t1.exon1;Parent=MS.gene022311.t1 |
| chr3.4 | CDS | 74484671 | 74484771 | 74484671 | ID=cds.MS.gene022311.t1;Parent=MS.gene022311.t1 |
| chr3.4 | exon | 74485917 | 74486005 | 74485917 | ID=MS.gene022311.t1.exon2;Parent=MS.gene022311.t1 |
| chr3.4 | CDS | 74485917 | 74486005 | 74485917 | ID=cds.MS.gene022311.t1;Parent=MS.gene022311.t1 |
| chr3.4 | exon | 74487484 | 74487582 | 74487484 | ID=MS.gene022311.t1.exon3;Parent=MS.gene022311.t1 |
| chr3.4 | CDS | 74487484 | 74487582 | 74487484 | ID=cds.MS.gene022311.t1;Parent=MS.gene022311.t1 |
| chr3.4 | exon | 74487892 | 74487968 | 74487892 | ID=MS.gene022311.t1.exon4;Parent=MS.gene022311.t1 |
| chr3.4 | CDS | 74487892 | 74487968 | 74487892 | ID=cds.MS.gene022311.t1;Parent=MS.gene022311.t1 |
| Gene Sequence |
| Protein sequence |
