AlfalfaGEDB | MS.gene87167

M. sativa cultivar XinJiangDaYe / MS.gene87167

KEGG: K03676
GO: GO:0003674 GO:0003824 GO:0008150 GO:0009055 GO:0009987 GO:0015035 GO:0015036 GO:0016491 GO:0016667 GO:0019725 GO:0042592 GO:0045454 GO:0050789 GO:0050794 GO:0065007 GO:0065008
PFAM: PF00462.27

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene87167.t1	XP_013448230.1	99.1	107	1	0	1	107	1	107	4.00E-52	213.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene87167.t1	P55142	77.1	105	24	0	1	105	1	105	2.7e-41	169.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene87167.t1	A0A072TXU3	99.1	107	1	0	1	107	1	107	2.9e-52	213.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene87167	MS.gene07182	PPI
MS.gene87167	MS.gene03026	PPI
MS.gene005632	MS.gene87167	PPI
MS.gene58935	MS.gene87167	PPI
MS.gene87167	MS.gene036527	PPI
MS.gene87167	MS.gene29370	PPI
MS.gene07180	MS.gene87167	PPI
MS.gene87167	MS.gene006982	PPI
MS.gene87167	MS.gene050229	PPI
MS.gene041519	MS.gene87167	PPI
MS.gene23005	MS.gene87167	PPI
MS.gene87167	MS.gene23008	PPI
MS.gene29371	MS.gene87167	PPI
MS.gene87167	MS.gene03024	PPI
MS.gene03023	MS.gene87167	PPI
MS.gene87167	MS.gene005629	PPI
MS.gene87167	MS.gene03022	PPI
MS.gene87167	MS.gene20705	PPI
MS.gene87167	MS.gene23009	PPI
MS.gene87167	MS.gene005628	PPI
MS.gene87167	MS.gene005630	PPI
MS.gene87167	MS.gene035294	PPI
MS.gene87167	MS.gene59643	PPI
MS.gene005633	MS.gene87167	PPI
MS.gene87167	MS.gene035291	PPI
MS.gene036528	MS.gene87167	PPI
MS.gene87167	MS.gene20704	PPI
MS.gene20702	MS.gene87167	PPI
MS.gene25978	MS.gene87167	PPI
MS.gene006983	MS.gene87167	PPI
MS.gene87167	MS.gene58937	PPI
MS.gene006980	MS.gene87167	PPI
MS.gene035290	MS.gene87167	PPI
MS.gene87167	MS.gene005631	PPI
MS.gene87167	MS.gene041518	PPI
MS.gene87167	MS.gene70641	PPI
MS.gene70642	MS.gene87167	PPI
MS.gene87167	MS.gene006984	PPI
MS.gene87167	MS.gene20701	PPI
MS.gene20703	MS.gene87167	PPI
MS.gene07179	MS.gene87167	PPI
MS.gene87167	MS.gene58938	PPI
MS.gene07183	MS.gene87167	PPI
MS.gene25976	MS.gene87167	PPI
MS.gene041521	MS.gene87167	PPI
MS.gene87167	MS.gene022311	PPI
MS.gene23007	MS.gene87167	PPI
MS.gene036524	MS.gene87167	PPI
MS.gene87167	MS.gene07181	PPI
MS.gene022312	MS.gene87167	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene87167.t1	MTR_7g035245	99.065	107	1	0	1	107	1	107	5.32e-75	217
MS.gene87167.t1	MTR_3g077570	65.714	105	36	0	2	106	17	121	9.17e-47	146
MS.gene87167.t1	MTR_3g077560	60.377	106	42	0	2	107	20	125	2.34e-45	143
MS.gene87167.t1	MTR_1g069255	52.083	96	45	1	7	101	87	182	5.02e-26	95.9
MS.gene87167.t1	MTR_2g038560	44.828	87	48	0	10	96	35	121	7.54e-24	88.6
MS.gene87167.t1	MTR_5g021090	43.333	90	51	0	10	99	40	129	1.88e-23	87.8
MS.gene87167.t1	MTR_2g038560	44.828	87	48	0	10	96	79	165	2.30e-23	88.6
MS.gene87167.t1	MTR_2g038560	44.828	87	48	0	10	96	76	162	2.41e-23	88.6
MS.gene87167.t1	MTR_2g019900	40.000	100	60	0	3	102	1	100	9.33e-21	80.1
MS.gene87167.t1	MTR_4g119050	40.594	101	59	1	3	102	1	101	2.25e-19	76.6
MS.gene87167.t1	MTR_4g119030	40.594	101	59	1	3	102	1	101	2.25e-19	76.6
MS.gene87167.t1	MTR_4g119040	40.594	101	59	1	3	102	1	101	2.25e-19	76.6
MS.gene87167.t1	MTR_7g108260	42.553	94	54	0	9	102	7	100	1.42e-18	74.3
MS.gene87167.t1	MTR_1g088905	41.053	95	56	0	8	102	6	100	4.01e-18	73.2
MS.gene87167.t1	MTR_7g026770	41.584	101	58	1	3	102	22	122	2.47e-17	75.1
MS.gene87167.t1	MTR_7g022690	36.634	101	63	1	3	102	30	130	4.56e-16	68.9
MS.gene87167.t1	MTR_1g088910	35.000	100	65	0	3	102	1	100	6.33e-16	67.8
MS.gene87167.t1	MTR_7g022550	36.634	101	63	1	3	102	30	130	8.08e-16	68.2
MS.gene87167.t1	MTR_7g022710	35.644	101	64	1	3	102	30	130	1.29e-15	67.8
MS.gene87167.t1	MTR_7g108250	39.362	94	57	0	9	102	7	100	3.33e-15	65.9
MS.gene87167.t1	MTR_1g088925	36.170	94	60	0	3	96	1	94	3.80e-15	65.5
MS.gene87167.t1	MTR_2g048970	38.384	99	57	1	8	102	33	131	4.74e-15	66.2
MS.gene87167.t1	MTR_2g019950	35.000	100	65	0	3	102	1	100	4.81e-15	65.5
MS.gene87167.t1	MTR_1g088920	35.106	94	61	0	3	96	1	94	5.86e-15	65.1
MS.gene87167.t1	MTR_1g088895	37.234	94	59	0	9	102	7	100	1.31e-14	64.3
MS.gene87167.t1	MTR_7g108220	34.653	101	65	1	3	102	1	101	2.27e-14	63.5
MS.gene87167.t1	MTR_7g108210	33.663	101	66	1	3	102	1	101	1.15e-13	62.0
MS.gene87167.t1	MTR_7g108200	34.043	94	62	0	3	96	1	94	2.27e-13	61.2
MS.gene87167.t1	MTR_1g015890	33.000	100	65	1	5	102	48	147	4.68e-12	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene87167.t1	AT5G40370	73.832	107	28	0	1	107	1	107	7.03e-58	174
MS.gene87167.t1	AT5G63030	67.961	103	33	0	5	107	21	123	3.44e-48	150
MS.gene87167.t1	AT5G40370	72.527	91	25	0	17	107	42	132	1.45e-47	149
MS.gene87167.t1	AT2G20270	51.485	101	48	1	7	106	79	179	2.36e-27	99.0
MS.gene87167.t1	AT5G20500	46.809	94	50	0	7	100	36	129	6.82e-27	96.7
MS.gene87167.t1	AT1G77370	44.444	90	50	0	10	99	41	130	1.64e-24	90.5
MS.gene87167.t1	AT4G28730	43.564	101	56	1	7	106	74	174	8.91e-24	89.7
MS.gene87167.t1	AT2G20270	40.625	128	48	1	7	106	79	206	7.04e-23	88.2
MS.gene87167.t1	AT4G15700	44.792	96	53	0	7	102	5	100	1.98e-20	79.3
MS.gene87167.t1	AT4G15680	41.000	100	59	0	3	102	1	100	2.38e-19	76.6
MS.gene87167.t1	AT4G15690	41.000	100	59	0	3	102	1	100	5.86e-19	75.5
MS.gene87167.t1	AT4G15670	40.000	100	60	0	3	102	1	100	6.40e-19	75.5
MS.gene87167.t1	AT4G15660	40.000	100	60	0	3	102	1	100	8.67e-19	75.1
MS.gene87167.t1	AT1G77370	34.483	116	50	1	10	99	41	156	1.07e-18	76.3
MS.gene87167.t1	AT5G18600	40.000	95	57	0	8	102	6	100	1.33e-18	74.7
MS.gene87167.t1	AT3G62930	38.000	100	62	0	3	102	1	100	5.28e-18	73.2
MS.gene87167.t1	AT1G03020	38.000	100	62	0	3	102	1	100	4.25e-17	70.9
MS.gene87167.t1	AT3G21460	38.947	95	58	0	8	102	6	100	4.02e-16	68.2
MS.gene87167.t1	AT2G47880	36.000	100	64	0	3	102	1	100	2.60e-15	66.2
MS.gene87167.t1	AT5G14070	37.037	108	60	1	3	102	31	138	2.79e-15	67.0
MS.gene87167.t1	AT4G33040	35.294	102	62	1	5	102	41	142	3.35e-15	67.0
MS.gene87167.t1	AT3G62950	33.663	101	66	1	3	102	1	101	1.23e-14	64.3
MS.gene87167.t1	AT3G62960	36.170	94	60	0	3	96	1	94	1.97e-14	63.9
MS.gene87167.t1	AT4G28730	46.269	67	35	1	7	72	74	140	2.27e-14	64.7
MS.gene87167.t1	AT1G06830	36.170	94	60	0	3	96	1	94	3.55e-14	63.2
MS.gene87167.t1	AT2G30540	37.234	94	59	0	3	96	1	94	7.47e-14	62.4
MS.gene87167.t1	AT2G47870	30.693	101	69	1	3	102	1	101	8.53e-14	62.4
MS.gene87167.t1	AT3G02000	37.736	106	60	1	3	102	29	134	5.61e-13	60.8
MS.gene87167.t1	AT5G11930	32.323	99	57	3	5	102	57	146	6.44e-11	55.8

Find 32 sgRNAs with CRISPR-Local

Find 121 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAAGAAACTCTTCACTGATT+TGG	0.249041	7.4:+65193239	MS.gene87167:CDS
ACATCTGCTGGAGCTATTTC+CGG	0.264150	7.4:+65195374	MS.gene87167:CDS
AAGAAACTCTTCACTGATTT+GGG	0.299250	7.4:+65193240	MS.gene87167:CDS
CGGTCCTCTGACCAGTCCAC+TGG	0.398861	7.4:-65194979	None:intergenic
TTTCTTCACTTGAACGCAAA+AGG	0.401883	7.4:-65193223	None:intergenic
GACACGATCTCCTTTGCCTT+TGG	0.420598	7.4:-65193046	None:intergenic
GTACCCCTGCTGACATCTGC+TGG	0.425056	7.4:+65195362	MS.gene87167:CDS
TCCACTGGGCTAATGCTGCC+TGG	0.439792	7.4:-65194964	None:intergenic
AACAACAAACTTGCAGAACC+AGG	0.456474	7.4:+65195331	MS.gene87167:CDS
CCTGAAAACAACGACGGGAT+TGG	0.458655	7.4:-65193071	None:intergenic
TAGCTCCAGCAGATGTCAGC+AGG	0.465614	7.4:-65195367	None:intergenic
TCATCTTTATGAGGTTGAAC+CGG	0.477995	7.4:-65195393	None:intergenic
AAACCAAGCTCATCTTTATG+AGG	0.483988	7.4:-65195402	None:intergenic
TTCTTCACTTGAACGCAAAA+GGG	0.501319	7.4:-65193222	None:intergenic
AGCTGATGGAAGTGAGATCC+AGG	0.502280	7.4:+65194946	MS.gene87167:intron
ATTGGCGGAAACCACATTGG+CGG	0.544707	7.4:+65195016	MS.gene87167:CDS
GCAGGGGTACCAACTTGCCC+TGG	0.558407	7.4:-65195349	None:intergenic
GCAGCATTAGCCCAGTGGAC+TGG	0.561864	7.4:+65194968	MS.gene87167:CDS
CTTGCAGAACCAGGGCAAGT+TGG	0.566673	7.4:+65195340	MS.gene87167:CDS
ACATTCAGAATCAAGTTCAA+CGG	0.570967	7.4:-65193277	None:intergenic
GGTCCTCTGACCAGTCCACT+GGG	0.581734	7.4:-65194978	None:intergenic
TTTATTGGCGGAAACCACAT+TGG	0.582108	7.4:+65195013	MS.gene87167:CDS
TAGCAAAATGGCACTACCAA+AGG	0.597425	7.4:+65193030	None:intergenic
AGTTACCTGAAAACAACGAC+GGG	0.599879	7.4:-65193076	None:intergenic
AGCTCCAGCAGATGTCAGCA+GGG	0.606978	7.4:-65195366	None:intergenic
TAGCCCAGTGGACTGGTCAG+AGG	0.617235	7.4:+65194975	MS.gene87167:CDS
AATGGCACTACCAAAGGCAA+AGG	0.621312	7.4:+65193036	None:intergenic
TCCAGGCAGCATTAGCCCAG+TGG	0.640066	7.4:+65194963	MS.gene87167:CDS
ACAACAAACTTGCAGAACCA+GGG	0.645865	7.4:+65195332	MS.gene87167:CDS
TACAGTCACAGCCGCCAATG+TGG	0.654629	7.4:-65195027	None:intergenic
GAGTTACCTGAAAACAACGA+CGG	0.699277	7.4:-65193077	None:intergenic
GCTCCAGCAGATGTCAGCAG+GGG	0.702458	7.4:-65195365	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATTAAATTAAATAAATAAA+AGG	-	chr7.4:65193317-65193336	None:intergenic	0.0%
!!!	AGAATACTTTATTATATTTT+AGG	+	chr7.4:65193364-65193383	MS.gene87167:intron	10.0%
!!!	GAATACTTTATTATATTTTA+GGG	+	chr7.4:65193365-65193384	MS.gene87167:intron	10.0%
!!	TTATTATTCAAAAACTAAAG+TGG	-	chr7.4:65193460-65193479	None:intergenic	15.0%
!!!	AAAATTAATTTTGACATGTT+TGG	-	chr7.4:65194173-65194192	None:intergenic	15.0%
!!!	ATAATTGATTTTGATATGTT+TGG	+	chr7.4:65193566-65193585	MS.gene87167:intron	15.0%
!!!	CTTTAGTTTTTGAATAATAA+TGG	+	chr7.4:65193460-65193479	MS.gene87167:intron	15.0%
!!!	TAATTGATTTTGATATGTTT+GGG	+	chr7.4:65193567-65193586	MS.gene87167:intron	15.0%
!!!	TGTTTTTATTTATTTCATTG+AGG	-	chr7.4:65193901-65193920	None:intergenic	15.0%
!!	AAAACCATAAAATATACACA+AGG	-	chr7.4:65194848-65194867	None:intergenic	20.0%
!!	AGAACATAAGAAAAATGAAT+CGG	-	chr7.4:65193757-65193776	None:intergenic	20.0%
!!	ATCAACAGAAAAAAAAATGA+AGG	-	chr7.4:65193116-65193135	None:intergenic	20.0%
!!	CAATATAAGATCATTACAAT+AGG	-	chr7.4:65194380-65194399	None:intergenic	20.0%
!!!	ATAATTTTCACTTAGTCATA+TGG	+	chr7.4:65194778-65194797	MS.gene87167:intron	20.0%
!!!	ATTTCCTTGTGTATATTTTA+TGG	+	chr7.4:65194841-65194860	MS.gene87167:intron	20.0%
!!!	CAAGTTAGAATCAATTTTAA+AGG	+	chr7.4:65194123-65194142	MS.gene87167:intron	20.0%
!!!	TAGTTTTTGAATAATAATGG+TGG	+	chr7.4:65193463-65193482	MS.gene87167:intron	20.0%
!!!	TTAATTTTATGCATCACTTT+TGG	+	chr7.4:65194185-65194204	MS.gene87167:intron	20.0%
!!!	TTTGAATATTTTGTGAACAT+AGG	+	chr7.4:65194240-65194259	MS.gene87167:intron	20.0%
!	AATAAATGAAACCAGTGATT+AGG	-	chr7.4:65195276-65195295	None:intergenic	25.0%
!	ATCATGCAAATAAAGTGATT+AGG	-	chr7.4:65194451-65194470	None:intergenic	25.0%
!	GAACATAAGAAAAATGAATC+GGG	-	chr7.4:65193756-65193775	None:intergenic	25.0%
!	GATTATCTAGAAAACAACTA+TGG	-	chr7.4:65194749-65194768	None:intergenic	25.0%
!	TATTCAAAATGAAGTGTGTT+TGG	-	chr7.4:65194228-65194247	None:intergenic	25.0%
!	TTTGATTAGGTCAATGAATT+TGG	+	chr7.4:65193875-65193894	MS.gene87167:intron	25.0%
!!	TAAGTGTCATATGTTGTTTA+AGG	+	chr7.4:65194324-65194343	MS.gene87167:intron	25.0%
!!	TAATAAAGTATTCTCAGAAG+AGG	-	chr7.4:65193358-65193377	None:intergenic	25.0%
!!!	TCACTTTATTTGCATGATTT+TGG	+	chr7.4:65194453-65194472	MS.gene87167:intron	25.0%
	AAAAATGAATCGGGTGAAAA+TGG	-	chr7.4:65193747-65193766	None:intergenic	30.0%
	ACATTCAGAATCAAGTTCAA+CGG	-	chr7.4:65193280-65193299	None:intergenic	30.0%
	CTGTAGAATTCACTAGTAAT+TGG	+	chr7.4:65194818-65194837	MS.gene87167:intron	30.0%
	GACAAAACACATAGAAATCA+TGG	-	chr7.4:65194883-65194902	None:intergenic	30.0%
	TACAAGTGATTCACTTTGTT+TGG	+	chr7.4:65193423-65193442	MS.gene87167:intron	30.0%
	TTTCAGTAAAATGTGTACGA+AGG	+	chr7.4:65194606-65194625	MS.gene87167:intron	30.0%
	TTTCCGCCAATAAAAACATT+TGG	-	chr7.4:65195007-65195026	None:intergenic	30.0%
!	CAAACAATATTTTACATGCG+AGG	+	chr7.4:65193841-65193860	MS.gene87167:intron	30.0%
!	GTTTTGTATTATTCATGACG+AGG	-	chr7.4:65193946-65193965	None:intergenic	30.0%
!	TTGATATGTTTGGGTGTTAT+CGG	+	chr7.4:65193576-65193595	MS.gene87167:intron	30.0%
!	TTGGTGTGTATTTTGTTACT+TGG	+	chr7.4:65194472-65194491	MS.gene87167:intron	30.0%
!!	AAGAAACTCTTCACTGATTT+GGG	+	chr7.4:65193240-65193259	MS.gene87167:CDS	30.0%
!!	ACTCAATTTTCTAGTCAAAC+AGG	+	chr7.4:65193920-65193939	MS.gene87167:intron	30.0%
!!	CAACGCTGATTTGTTTAATT+CGG	+	chr7.4:65193155-65193174	MS.gene87167:intron	30.0%
	AATACAAAACAACTCCGTGT+TGG	+	chr7.4:65193956-65193975	MS.gene87167:intron	35.0%
	AATCACTCTGCTTCATTTAC+TGG	+	chr7.4:65194640-65194659	MS.gene87167:intron	35.0%
	ACCAAGTGAATTAACTGAAG+TGG	+	chr7.4:65194910-65194929	MS.gene87167:intron	35.0%
	ACCACTTCAGTTAATTCACT+TGG	-	chr7.4:65194914-65194933	None:intergenic	35.0%
	CATGTTTGGATGATGTCAAT+TGG	-	chr7.4:65194159-65194178	None:intergenic	35.0%
	CATTCACAAACTCATACCAA+AGG	-	chr7.4:65193812-65193831	None:intergenic	35.0%
	CGAACATTAGTAACCTATGT+TGG	+	chr7.4:65194690-65194709	MS.gene87167:intron	35.0%
	GCCAATAAAAACATTTGGCA+CGG	-	chr7.4:65195002-65195021	None:intergenic	35.0%
	GTCGTAAAATCAAACCAACA+CGG	-	chr7.4:65193973-65193992	None:intergenic	35.0%
	TAGTAACCTATGTTGGATCA+GGG	+	chr7.4:65194697-65194716	MS.gene87167:intron	35.0%
	TTAGTAACCTATGTTGGATC+AGG	+	chr7.4:65194696-65194715	MS.gene87167:intron	35.0%
	TTCTTCACTTGAACGCAAAA+GGG	-	chr7.4:65193225-65193244	None:intergenic	35.0%
	TTTCTTCACTTGAACGCAAA+AGG	-	chr7.4:65193226-65193245	None:intergenic	35.0%
	TTTGTGAACATAGGTTTCAC+TGG	+	chr7.4:65194249-65194268	MS.gene87167:intron	35.0%
!	ATGAAGTGTGTTTGGTTTCA+TGG	-	chr7.4:65194220-65194239	None:intergenic	35.0%
!	GAAGAAACTCTTCACTGATT+TGG	+	chr7.4:65193239-65193258	MS.gene87167:CDS	35.0%
!	GATTCACTTTGTTTGGATCA+CGG	+	chr7.4:65193430-65193449	MS.gene87167:intron	35.0%
!!	ACCGTGCCAAATGTTTTTAT+TGG	+	chr7.4:65194998-65195017	MS.gene87167:CDS	35.0%
!!	GTGCCAAATGTTTTTATTGG+CGG	+	chr7.4:65195001-65195020	MS.gene87167:CDS	35.0%
!!!	AGTTGGTTTTGGTTAAGTGT+TGG	+	chr7.4:65194545-65194564	MS.gene87167:intron	35.0%
!!!	TTTTTTCTACGATTCACGGA+TGG	-	chr7.4:65195090-65195109	None:intergenic	35.0%
	AACAACAAACTTGCAGAACC+AGG	+	chr7.4:65195331-65195350	MS.gene87167:CDS	40.0%
	AACAATCCCTGATCCAACAT+AGG	-	chr7.4:65194706-65194725	None:intergenic	40.0%
	ACAAACTCATACCAAAGGTG+GGG	-	chr7.4:65193807-65193826	None:intergenic	40.0%
	ACAACAAACTTGCAGAACCA+GGG	+	chr7.4:65195332-65195351	MS.gene87167:CDS	40.0%
	AGATTTAGTGTACGTCACGA+TGG	-	chr7.4:65193510-65193529	None:intergenic	40.0%
	AGTTACCTGAAAACAACGAC+GGG	-	chr7.4:65193079-65193098	None:intergenic	40.0%
	ATCGTGACGTACACTAAATC+TGG	+	chr7.4:65193509-65193528	MS.gene87167:intron	40.0%
	CACAAACTCATACCAAAGGT+GGG	-	chr7.4:65193808-65193827	None:intergenic	40.0%
	CCGTGAATCGTAGAAAAAAG+CGG	+	chr7.4:65195091-65195110	MS.gene87167:intron	40.0%
	GAAGCAGAGTGATTAACTGA+AGG	-	chr7.4:65194634-65194653	None:intergenic	40.0%
	GAGTTACCTGAAAACAACGA+CGG	-	chr7.4:65193080-65193099	None:intergenic	40.0%
	GTTTGACATTATGCAGCTGA+TGG	+	chr7.4:65194932-65194951	MS.gene87167:intron	40.0%
	TAGTCCTACCTCTCATTACA+GGG	+	chr7.4:65194517-65194536	MS.gene87167:intron	40.0%
	TATGCGAGTTTCCTAATCAC+TGG	+	chr7.4:65195262-65195281	MS.gene87167:intron	40.0%
	TCACAAACTCATACCAAAGG+TGG	-	chr7.4:65193809-65193828	None:intergenic	40.0%
	TCGTGACGTACACTAAATCT+GGG	+	chr7.4:65193510-65193529	MS.gene87167:intron	40.0%
	TTAAAGCAGAACAAATGCCC+TGG	-	chr7.4:65194307-65194326	None:intergenic	40.0%
	TTTATTGGCGGAAACCACAT+TGG	+	chr7.4:65195013-65195032	MS.gene87167:CDS	40.0%
!	AGTGTGTTTGGTTTCATGGT+AGG	-	chr7.4:65194216-65194235	None:intergenic	40.0%
!	CGATGGATTTGTCAGAATCA+CGG	-	chr7.4:65193493-65193512	None:intergenic	40.0%
!	CTAAATCTGGGCGACAATTT+TGG	+	chr7.4:65193522-65193541	MS.gene87167:intron	40.0%
!	GTGTGTTTGGTTTCATGGTA+GGG	-	chr7.4:65194215-65194234	None:intergenic	40.0%
!!	TTTACATGCGAGGTTTTAGC+TGG	+	chr7.4:65193851-65193870	MS.gene87167:intron	40.0%
!!!	CCGCTTTTTTCTACGATTCA+CGG	-	chr7.4:65195094-65195113	None:intergenic	40.0%
!!!	GGTTTTAGCTGGCTTTGATT+AGG	+	chr7.4:65193862-65193881	MS.gene87167:intron	40.0%
	CAAACATTTGTCCCCACCTT+TGG	+	chr7.4:65193793-65193812	MS.gene87167:intron	45.0%
	CTACCTCTCATTACAGGGTT+CGG	+	chr7.4:65194522-65194541	MS.gene87167:intron	45.0%
	CTAGTCCTACCTCTCATTAC+AGG	+	chr7.4:65194516-65194535	MS.gene87167:intron	45.0%
	CTGCTTCATTTACTGGCAGA+AGG	+	chr7.4:65194647-65194666	MS.gene87167:intron	45.0%
	TGCAAGATGACTGCAAACCA+GGG	+	chr7.4:65194287-65194306	MS.gene87167:intron	45.0%
	TGTTGCTGCATACAATCGCA+AGG	-	chr7.4:65195315-65195334	None:intergenic	45.0%
!	ACATCTGCTGGAGCTATTTC+CGG	+	chr7.4:65195374-65195393	MS.gene87167:CDS	45.0%
!	TGGTTTGCAGTCATCTTGCA+GGG	-	chr7.4:65194287-65194306	None:intergenic	45.0%
!!!	TTTAATTTTAAACTATAATT+TGG	+	chr7.4:65193625-65193644	MS.gene87167:intron	5.0%
	ACTCCGAACCCTGTAATGAG+AGG	-	chr7.4:65194528-65194547	None:intergenic	50.0%
	AGCTGATGGAAGTGAGATCC+AGG	+	chr7.4:65194946-65194965	MS.gene87167:intron	50.0%
	ATTGGCGGAAACCACATTGG+CGG	+	chr7.4:65195016-65195035	MS.gene87167:CDS	50.0%
	CCTGAAAACAACGACGGGAT+TGG	-	chr7.4:65193074-65193093	None:intergenic	50.0%
	CGAACCCTGTAATGAGAGGT+AGG	-	chr7.4:65194524-65194543	None:intergenic	50.0%
	CTCATTACAGGGTTCGGAGT+TGG	+	chr7.4:65194528-65194547	MS.gene87167:intron	50.0%
	CTGCAAGATGACTGCAAACC+AGG	+	chr7.4:65194286-65194305	MS.gene87167:intron	50.0%
	GACACGATCTCCTTTGCCTT+TGG	-	chr7.4:65193049-65193068	None:intergenic	50.0%
!	CTGGTTTGCAGTCATCTTGC+AGG	-	chr7.4:65194288-65194307	None:intergenic	50.0%
!!	ACAGGGTTCGGAGTTGGTTT+TGG	+	chr7.4:65194534-65194553	MS.gene87167:intron	50.0%
!!	CCAATCCCGTCGTTGTTTTC+AGG	+	chr7.4:65193071-65193090	MS.gene87167:CDS	50.0%
	AGCTCCAGCAGATGTCAGCA+GGG	-	chr7.4:65195369-65195388	None:intergenic	55.0%
	CTTGCAGAACCAGGGCAAGT+TGG	+	chr7.4:65195340-65195359	MS.gene87167:CDS	55.0%
	TACAGTCACAGCCGCCAATG+TGG	-	chr7.4:65195030-65195049	None:intergenic	55.0%
	TAGCTCCAGCAGATGTCAGC+AGG	-	chr7.4:65195370-65195389	None:intergenic	55.0%
	GCAGCATTAGCCCAGTGGAC+TGG	+	chr7.4:65194968-65194987	MS.gene87167:CDS	60.0%
	GCTCCAGCAGATGTCAGCAG+GGG	-	chr7.4:65195368-65195387	None:intergenic	60.0%
	GGTCCTCTGACCAGTCCACT+GGG	-	chr7.4:65194981-65195000	None:intergenic	60.0%
	GTACCCCTGCTGACATCTGC+TGG	+	chr7.4:65195362-65195381	MS.gene87167:CDS	60.0%
	TCCACTGGGCTAATGCTGCC+TGG	-	chr7.4:65194967-65194986	None:intergenic	60.0%
	TCCAGGCAGCATTAGCCCAG+TGG	+	chr7.4:65194963-65194982	MS.gene87167:CDS	60.0%
!!	TAGCCCAGTGGACTGGTCAG+AGG	+	chr7.4:65194975-65194994	MS.gene87167:CDS	60.0%
	CGGTCCTCTGACCAGTCCAC+TGG	-	chr7.4:65194982-65195001	None:intergenic	65.0%
!!	GCAGGGGTACCAACTTGCCC+TGG	-	chr7.4:65195352-65195371	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.4	gene	65193037	65195409	65193037	ID=MS.gene87167
chr7.4	mRNA	65193037	65195409	65193037	ID=MS.gene87167.t1;Parent=MS.gene87167
chr7.4	exon	65193037	65193092	65193037	ID=MS.gene87167.t1.exon1;Parent=MS.gene87167.t1
chr7.4	CDS	65193037	65193092	65193037	ID=cds.MS.gene87167.t1;Parent=MS.gene87167.t1
chr7.4	exon	65193209	65193297	65193209	ID=MS.gene87167.t1.exon2;Parent=MS.gene87167.t1
chr7.4	CDS	65193209	65193297	65193209	ID=cds.MS.gene87167.t1;Parent=MS.gene87167.t1
chr7.4	exon	65194948	65195046	65194948	ID=MS.gene87167.t1.exon3;Parent=MS.gene87167.t1
chr7.4	CDS	65194948	65195046	65194948	ID=cds.MS.gene87167.t1;Parent=MS.gene87167.t1
chr7.4	exon	65195330	65195409	65195330	ID=MS.gene87167.t1.exon4;Parent=MS.gene87167.t1
chr7.4	CDS	65195330	65195409	65195330	ID=cds.MS.gene87167.t1;Parent=MS.gene87167.t1

Gene Sequence

>MS.gene87167

ATGGCACTACCAAAGGCAAAGGAGATCGTGTCTTCCAATCCCGTCGTTGTTTTCAGGTAACTCGCTTTTTCTTATTCCTTCATTTTTTTTTCTGTTGATTCATTGTTTGTAAAAACAACAACGCTGATTTGTTTAATTCGGTGATTGATTGATTGATTGCATTTTTTTGCAGCAAAAGCTACTGTCCCTTTTGCGTTCAAGTGAAGAAACTCTTCACTGATTTGGGTGTCACTTTCAAAGCCGTTGAACTTGATTCTGAATGTAACTGCTTTCACATCCTTTTATTTATTTAATTTAATTTATTTTTTATTTATTTTTCCTCTTCTGAGAATACTTTATTATATTTTAGGGTTCGTAAATTGTTGCACATAATTATTTAAATCAATTACAAGTGATTCACTTTGTTTGGATCACGGCGAGCCACTTTAGTTTTTGAATAATAATGGTGGCTCACCGTGATTCTGACAAATCCATCGTGACGTACACTAAATCTGGGCGACAATTTTGGAAGAGATGAAATTGATTGTACATAATTGATTTTGATATGTTTGGGTGTTATCGGATAGAGTTGTTTTTTGTTATAAGTTTTTTAATTTTAAACTATAATTTGGAGCTTTTGTCTCTATAACTAAATTCAGTTTAAAATTTATTGTTTAACTTACTTTTACGTAAACTGAGATCAATTTTATAAAATCAATTCGATGAAACCATTTTCACCCGATTCATTTTTCTTATGTTCTCTTTCTAATGAAATGTCAAACATTTGTCCCCACCTTTGGTATGAGTTTGTGAATGTGAAATTGTCAAACAATATTTTACATGCGAGGTTTTAGCTGGCTTTGATTAGGTCAATGAATTTGGCCTCAATGAAATAAATAAAAACACTCAATTTTCTAGTCAAACAGGCCTCGTCATGAATAATACAAAACAACTCCGTGTTGGTTTGATTTTACGACACAAAAATTGATTTTGAATAAATTGATTTTAGTTTGAAGTGATTTATGTTTGTATTGTTTTATTTAGAAGTAAGTTGAACAATAAATTTTAGTGTAAAAATCACGTTGAGTCAAAAACTACAAAATTTATCAAGTTAGAATCAATTTTAAAGGCAAATCAATTCCAATTGACATCATCCAAACATGTCAAAATTAATTTTATGCATCACTTTTGGCTTTCCCTACCATGAAACCAAACACACTTCATTTTGAATATTTTGTGAACATAGGTTTCACTGGTTACTGTTTTTGCCCTGCAAGATGACTGCAAACCAGGGCATTTGTTCTGCTTTAAGTGTCATATGTTGTTTAAGGATGTATAAATCAGTTGATCTTAGTGTCACTCCTATTGTAATGATCTTATATTGTGTTCATTTTCAGACACTATTGACGTTATTTTCTGCTTTTGAGCGACACCTAATCACTTTATTTGCATGATTTTGGTGTGTATTTTGTTACTTGGAAGATTATACTTTTGCATTGTCTAGTCCTACCTCTCATTACAGGGTTCGGAGTTGGTTTTGGTTAAGTGTTGGATAATGTCTAAACTGTGTTCTATTTATCAGCAACGAGTTTTCAGTAAAATGTGTACGAAGGTGCCTTCAGTTAATCACTCTGCTTCATTTACTGGCAGAAGGCAAGAGTGAACTGAAAGTATCGAACATTAGTAACCTATGTTGGATCAGGGATTGTTTTTTCACAAAAATTATAGCTCCATAGTTGTTTTCTAGATAATCAAATAATATATAATTTTCACTTAGTCATATGGAAGTCTATGCATAAAATCTGTAGAATTCACTAGTAATTGGATTTCCTTGTGTATATTTTATGGTTTTTGTTTATTGTTTCCATGATTTCTATGTGTTTTGTCTGTGAAAACCAAGTGAATTAACTGAAGTGGTTTGACATTATGCAGCTGATGGAAGTGAGATCCAGGCAGCATTAGCCCAGTGGACTGGTCAGAGGACCGTGCCAAATGTTTTTATTGGCGGAAACCACATTGGCGGCTGTGACTGTAAGATATAGATTTTTTTTAATACATTTATGCATTGTTGCCATCCGTGAATCGTAGAAAAAAGCGGTTTGTTAAAATTTTGCTGCGCAACAATACTATAGCTCTACTACAGTTACTGTTTGACATCATTTTGCTCTAAATAGCAGATAGCAGAACAGTAGCAATTTGTTCAAATTCTACTATGCTATTGTGCTATAGTGCTGCTGTTTAGCATCTATGCGAGTTTCCTAATCACTGGTTTCATTTATTGAATTGTTTTCTTGATCCTTGCGATTGTATGCAGCAACAACAAACTTGCAGAACCAGGGCAAGTTGGTACCCCTGCTGACATCTGCTGGAGCTATTTCCGGTTCAACCTCATAA

Protein sequence

>MS.gene87167.t1

MALPKAKEIVSSNPVVVFSKSYCPFCVQVKKLFTDLGVTFKAVELDSESDGSEIQAALAQWTGQRTVPNVFIGGNHIGGCDSTTNLQNQGKLVPLLTSAGAISGSTS