AlfalfaGEDB | MS.gene022561

M. sativa cultivar XinJiangDaYe / MS.gene022561

KEGG: -
GO: -
PFAM: PF03140.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene022561.t1	XP_013443756.1	94.8	458	24	0	1	458	1	458	3.30E-257	897.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene022561.t1	Q9SD53	28.2	444	265	13	18	442	37	445	5.2e-33	143.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene022561.t1	A0A072TKP8	94.8	458	24	0	1	458	1	458	2.4e-257	897.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene055356	MS.gene022561	PPI
MS.gene019468	MS.gene022561	PPI
MS.gene022561	MS.gene061337	PPI
MS.gene022561	MS.gene061334	PPI
MS.gene022561	MS.gene055358	PPI
MS.gene022561	MS.gene055357	PPI
MS.gene91807	MS.gene022561	PPI
MS.gene061337	MS.gene022561	PPI
MS.gene022561	MS.gene061335	PPI
MS.gene022559	MS.gene022561	PPI
MS.gene91806	MS.gene022561	PPI
MS.gene055354	MS.gene022561	PPI
MS.gene061336	MS.gene022561	PPI
MS.gene022561	MS.gene022562	PPI
MS.gene022561	MS.gene91808	PPI
MS.gene022561	MS.gene38854	PPI
MS.gene91805	MS.gene022561	PPI
MS.gene022561	MS.gene055359	PPI
MS.gene022561	MS.gene022560	PPI
MS.gene022561	MS.gene91809	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene022561.t1	MTR_8g005265	94.760	458	24	0	1	458	1	458	0.0	884
MS.gene022561.t1	MTR_4g112660	72.789	441	38	5	22	458	1	363	0.0	615
MS.gene022561.t1	MTR_8g005225	60.566	459	162	10	4	455	13	459	0.0	531
MS.gene022561.t1	MTR_8g005325	53.215	451	192	6	8	454	37	472	3.47e-158	456
MS.gene022561.t1	MTR_8g005235	50.873	458	205	7	1	454	1	442	1.01e-156	451
MS.gene022561.t1	MTR_0209s0060	47.865	445	198	10	9	449	11	425	2.70e-132	389
MS.gene022561.t1	MTR_0209s0030	47.865	445	198	10	9	449	11	425	2.70e-132	389
MS.gene022561.t1	MTR_8g005295	43.922	510	206	12	9	455	19	511	3.16e-132	391
MS.gene022561.t1	MTR_8g006525	48.993	447	194	11	8	449	9	426	8.57e-131	385
MS.gene022561.t1	MTR_8g005285	45.233	493	210	13	9	455	19	497	7.82e-130	385
MS.gene022561.t1	MTR_0024s0080	35.904	415	213	14	28	438	26	391	4.59e-66	218
MS.gene022561.t1	MTR_6g011060	33.710	442	237	13	17	446	15	412	4.99e-64	213
MS.gene022561.t1	MTR_6g010890	33.185	449	253	14	9	446	7	419	1.02e-63	212
MS.gene022561.t1	MTR_6g010920	33.486	436	229	13	19	441	10	397	2.75e-63	210
MS.gene022561.t1	MTR_6g011050	32.857	420	229	10	25	438	22	394	2.19e-61	205
MS.gene022561.t1	MTR_6g009590	33.971	418	228	12	25	438	23	396	4.15e-61	205
MS.gene022561.t1	MTR_6g009610	33.333	417	232	9	25	438	23	396	1.87e-60	203
MS.gene022561.t1	MTR_3g107590	33.410	434	248	10	9	437	8	405	4.59e-59	200
MS.gene022561.t1	MTR_3g079390	30.388	464	255	11	9	446	22	443	3.69e-58	198
MS.gene022561.t1	MTR_6g009170	34.426	427	232	15	20	437	18	405	7.66e-58	197
MS.gene022561.t1	MTR_6g010810	32.414	435	238	14	20	446	15	401	1.95e-57	195
MS.gene022561.t1	MTR_2g036320	28.538	424	266	14	24	443	64	454	3.29e-42	156
MS.gene022561.t1	MTR_5g016570	30.277	469	250	16	7	433	74	507	1.30e-41	155
MS.gene022561.t1	MTR_2g035640	30.670	388	217	10	64	446	2	342	2.32e-41	151
MS.gene022561.t1	MTR_6g010850	32.143	364	198	11	98	457	33	351	2.09e-40	149
MS.gene022561.t1	MTR_2g041180	27.869	427	266	15	24	443	47	438	6.42e-39	147
MS.gene022561.t1	MTR_5g086340	27.918	437	258	12	23	444	28	422	7.31e-38	144
MS.gene022561.t1	MTR_7g011980	32.917	240	124	6	213	444	123	333	1.04e-29	119
MS.gene022561.t1	MTR_7g011980	36.667	150	65	3	20	169	18	137	1.19e-18	87.4
MS.gene022561.t1	MTR_6g009580	34.112	214	116	5	226	437	29	219	1.23e-28	113
MS.gene022561.t1	MTR_8g042830	25.835	449	240	13	14	444	30	403	5.61e-26	109
MS.gene022561.t1	MTR_5g087580	30.151	199	118	2	258	455	39	217	8.43e-21	91.3
MS.gene022561.t1	MTR_7g060840	23.380	432	265	11	41	451	42	428	3.03e-20	93.2
MS.gene022561.t1	MTR_6g009600	36.364	132	65	2	261	392	22	134	4.86e-20	87.0
MS.gene022561.t1	MTR_5g086260	28.378	222	132	4	241	455	110	311	8.06e-20	90.5
MS.gene022561.t1	MTR_7g060020	24.208	442	269	15	29	452	31	424	5.90e-19	89.4
MS.gene022561.t1	MTR_8g042170	25.508	443	272	16	29	438	26	443	8.59e-19	89.0
MS.gene022561.t1	MTR_7g059540	23.293	498	284	16	1	442	2	457	1.72e-17	85.1
MS.gene022561.t1	MTR_7g060260	22.646	446	284	12	1	429	2	403	7.75e-17	82.8
MS.gene022561.t1	MTR_7g059810	23.832	428	243	14	41	431	42	423	1.06e-16	82.4
MS.gene022561.t1	MTR_7g059510	23.400	453	249	16	29	452	31	414	1.83e-16	81.6
MS.gene022561.t1	MTR_7g059540	23.379	509	280	18	1	442	1	466	2.43e-16	81.6
MS.gene022561.t1	MTR_7g060115	22.904	489	295	18	1	452	1	444	9.39e-16	79.7
MS.gene022561.t1	MTR_7g060310	23.214	448	300	14	41	451	43	483	3.14e-15	78.2
MS.gene022561.t1	MTR_7g059520	29.091	165	100	3	262	425	5	153	3.95e-15	73.6
MS.gene022561.t1	MTR_5g086230	32.544	169	104	5	14	173	14	181	4.27e-15	74.3
MS.gene022561.t1	MTR_0182s0060	30.366	191	112	5	262	451	342	512	5.00e-15	77.8
MS.gene022561.t1	MTR_7g446270	23.305	472	256	16	29	432	31	464	2.18e-14	75.5
MS.gene022561.t1	MTR_7g059525	30.496	141	96	2	304	442	134	274	4.62e-14	72.8
MS.gene022561.t1	MTR_7g060220	23.380	432	259	15	29	431	27	415	4.80e-14	74.3
MS.gene022561.t1	MTR_7g060160	24.105	419	248	13	41	452	41	396	1.14e-13	72.8
MS.gene022561.t1	MTR_7g060320	27.811	169	105	3	262	429	289	441	1.94e-13	72.4
MS.gene022561.t1	MTR_1g040690	25.000	412	251	14	25	411	25	403	2.03e-13	72.4
MS.gene022561.t1	MTR_7g060080	26.776	183	116	3	262	442	16	182	5.05e-13	68.2
MS.gene022561.t1	MTR_3g107600	27.230	213	107	6	227	438	406	571	9.92e-13	70.9
MS.gene022561.t1	MTR_7g059480	27.465	142	102	1	304	444	624	765	1.60e-12	70.1
MS.gene022561.t1	MTR_3g466740	27.559	381	197	19	29	370	32	372	1.04e-11	67.0
MS.gene022561.t1	MTR_7g017620	25.668	187	118	3	258	443	364	530	1.29e-11	67.0
MS.gene022561.t1	MTR_2g036310	28.889	135	93	2	311	443	15	148	4.79e-11	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene022561.t1	AT2G28580	30.455	440	251	11	25	446	39	441	2.03e-54	189
MS.gene022561.t1	AT2G28580	30.455	440	251	11	25	446	107	509	1.07e-53	188
MS.gene022561.t1	AT2G28580	30.455	440	251	11	25	446	121	523	1.78e-53	188
MS.gene022561.t1	AT2G28580	29.698	431	249	10	25	446	107	492	8.66e-52	183
MS.gene022561.t1	AT2G28580	29.698	431	249	10	25	446	121	506	1.34e-51	182
MS.gene022561.t1	AT4G31980	31.084	415	237	13	23	433	289	658	2.33e-51	184
MS.gene022561.t1	AT2G44930	29.047	451	250	13	25	447	82	490	3.23e-51	181
MS.gene022561.t1	AT2G36430	31.144	411	239	15	27	429	45	419	1.20e-50	178
MS.gene022561.t1	AT3G50120	27.373	453	268	11	20	444	96	515	1.78e-44	163
MS.gene022561.t1	AT1G67150	28.146	437	257	13	22	444	1	394	5.11e-44	159
MS.gene022561.t1	AT1G67150	28.146	437	257	13	22	444	1	394	5.11e-44	159
MS.gene022561.t1	AT3G50170	27.740	447	260	10	26	444	112	523	7.44e-44	162
MS.gene022561.t1	AT5G11290	25.778	450	287	11	2	446	6	413	2.71e-43	158
MS.gene022561.t1	AT1G67150	27.891	441	257	13	22	444	1	398	2.90e-43	157
MS.gene022561.t1	AT3G50150	26.050	476	284	14	12	456	68	506	7.91e-42	155
MS.gene022561.t1	AT3G50140	28.062	449	258	14	25	444	111	523	6.38e-41	154
MS.gene022561.t1	AT3G50160	27.416	445	262	13	25	456	102	498	6.79e-40	150
MS.gene022561.t1	AT3G50130	28.160	451	257	13	12	429	117	533	2.30e-39	149
MS.gene022561.t1	AT3G47200	28.539	445	263	13	18	442	37	446	2.91e-39	148
MS.gene022561.t1	AT3G47200	28.539	445	263	13	18	442	37	446	2.91e-39	148
MS.gene022561.t1	AT3G50180	28.995	438	250	16	26	444	177	572	3.81e-38	146
MS.gene022561.t1	AT3G47250	26.593	455	264	14	18	444	52	464	6.26e-37	141
MS.gene022561.t1	AT3G47250	26.593	455	264	14	18	444	52	464	6.26e-37	141
MS.gene022561.t1	AT3G47250	26.593	455	264	14	18	444	52	464	6.26e-37	141
MS.gene022561.t1	AT1G65985	27.716	451	237	14	28	429	15	425	3.73e-36	139
MS.gene022561.t1	AT1G65985	27.716	451	237	14	28	429	15	425	3.73e-36	139
MS.gene022561.t1	AT2G28580	30.769	364	197	11	25	370	121	447	6.13e-36	139
MS.gene022561.t1	AT3G47210	28.395	405	243	11	18	413	84	450	9.96e-35	135
MS.gene022561.t1	AT5G22550	25.536	466	283	13	27	450	44	487	4.30e-32	128
MS.gene022561.t1	AT5G22540	26.024	415	261	11	25	429	29	407	1.97e-31	125
MS.gene022561.t1	AT3G50190	27.315	432	254	14	25	444	94	477	2.47e-31	126
MS.gene022561.t1	AT5G11290	23.636	385	250	9	64	446	2	344	4.50e-28	114
MS.gene022561.t1	AT1G67150	24.485	437	230	15	22	444	1	351	1.26e-26	110
MS.gene022561.t1	AT5G22560	28.390	236	134	6	24	240	44	263	1.93e-24	106
MS.gene022561.t1	AT3G44710	32.328	232	133	9	15	238	34	249	2.99e-23	102
MS.gene022561.t1	AT3G50170	26.298	289	172	8	26	288	112	385	2.72e-20	93.2
MS.gene022561.t1	AT3G60470	31.522	184	105	3	264	446	365	528	8.26e-20	92.4
MS.gene022561.t1	AT3G60470	31.667	180	94	5	21	173	26	203	2.32e-16	82.0
MS.gene022561.t1	AT3G50140	27.491	291	168	10	25	288	111	385	5.22e-18	86.3
MS.gene022561.t1	AT3G50150	23.496	349	212	14	25	338	88	416	1.16e-17	85.5
MS.gene022561.t1	AT3G02645	27.374	179	111	2	254	431	338	498	1.72e-15	79.3
MS.gene022561.t1	AT3G50190	26.296	270	166	10	25	288	94	336	9.85e-14	72.8
MS.gene022561.t1	AT3G50190	26.296	270	166	10	25	288	94	336	9.85e-14	72.8
MS.gene022561.t1	AT3G50190	26.296	270	166	10	25	288	94	336	1.09e-13	72.8

Find 54 sgRNAs with CRISPR-Local

Find 69 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACATAGGCTCAATGATTTC+TGG	0.230505	8.4:-80429528	None:intergenic
TCAAATTCCTATGTTTGTTT+TGG	0.230982	8.4:+80429971	MS.gene022561:CDS
TAACTGGTGGAAACATTATA+TGG	0.253364	8.4:+80430712	MS.gene022561:CDS
GAATTGGCAACATTGGTTAA+TGG	0.296171	8.4:+80430617	MS.gene022561:CDS
AGTACATATTCTGGTCTAAA+AGG	0.297271	8.4:-80430242	None:intergenic
GCTGTTCTTAGTACATATTC+TGG	0.309895	8.4:-80430251	None:intergenic
CTGCATGACTTCCAAGTTCA+TGG	0.314386	8.4:-80430595	None:intergenic
ATCCTGACAAAGTTCTTGTT+TGG	0.324444	8.4:-80429796	None:intergenic
TGTTTCTCTTGATTAAGTTC+TGG	0.332904	8.4:-80429657	None:intergenic
AAGCAACAGAATGTGTTCTT+AGG	0.348136	8.4:+80430444	MS.gene022561:CDS
ACACCAAAGTTTATCTCAAT+TGG	0.352179	8.4:+80429615	MS.gene022561:CDS
TGAATGAACATTATAATAAC+TGG	0.371937	8.4:+80430696	MS.gene022561:CDS
AAATAAACAAACTTTAGCTT+TGG	0.384668	8.4:+80429719	MS.gene022561:CDS
CCCTTTACTTGAATTTCTCT+TGG	0.389233	8.4:-80430194	None:intergenic
TTGTTATGGAAAGATCATTA+AGG	0.389525	8.4:+80430670	MS.gene022561:CDS
GAATGGTTGCAATAGCAATA+AGG	0.400363	8.4:+80430028	MS.gene022561:CDS
ACTTGGAAGTCATGCAGAAT+TGG	0.403752	8.4:+80430601	MS.gene022561:CDS
ATCTAATCAAATCAGTGAAA+TGG	0.406351	8.4:-80430160	None:intergenic
TTCCAAACAAGAACTTTGTC+AGG	0.413695	8.4:+80429794	MS.gene022561:CDS
CCAAGAGAAATTCAAGTAAA+GGG	0.431353	8.4:+80430194	MS.gene022561:CDS
TCCAAGAGAAATTCAAGTAA+AGG	0.438931	8.4:+80430193	MS.gene022561:CDS
ACATGAAGATGTTGAGTTGT+TGG	0.443426	8.4:+80430553	MS.gene022561:CDS
GGACCAATTGAGATAAACTT+TGG	0.444411	8.4:-80429618	None:intergenic
ATTTCATGTTTACAACATCA+TGG	0.446527	8.4:+80429907	MS.gene022561:CDS
AGAGTTAGTTCAACTGTTGT+TGG	0.459714	8.4:+80430770	MS.gene022561:CDS
TAAGAACACATTCTGTTGCT+TGG	0.460229	8.4:-80430442	None:intergenic
AACATTATATGGGAATGTTA+AGG	0.469604	8.4:+80430723	MS.gene022561:CDS
ATTAGTTTCGAGAAAGTTCA+AGG	0.472626	8.4:+80430296	MS.gene022561:CDS
GTGGTGACATCAAATTGTTA+TGG	0.484272	8.4:+80430656	MS.gene022561:CDS
GAAATCATTAGCCATGAACT+TGG	0.500879	8.4:+80430584	MS.gene022561:CDS
GCTACAAAGTTGAGTGAAGC+AGG	0.504844	8.4:+80430272	MS.gene022561:CDS
CATAGTTGCATATGAAAGGT+TGG	0.506971	8.4:-80430502	None:intergenic
TCTGGATTCTGACTATGAAA+AGG	0.511649	8.4:-80429639	None:intergenic
AACTGGTGGAAACATTATAT+GGG	0.515685	8.4:+80430713	MS.gene022561:CDS
GATTTACAAAATGACACAAA+GGG	0.517121	8.4:+80429929	MS.gene022561:CDS
CTTGGTCTACATTCAAATGC+GGG	0.526420	8.4:-80430424	None:intergenic
AATTCCTCCAAAACAAACAT+AGG	0.529945	8.4:-80429978	None:intergenic
CTTCATTCAACTTCAAGAGA+TGG	0.534037	8.4:-80429584	None:intergenic
TCATGCAGAATTGGCAACAT+TGG	0.537428	8.4:+80430610	MS.gene022561:CDS
GTGTTATTAGCTGAAAAGAA+TGG	0.538677	8.4:+80430011	MS.gene022561:CDS
GAAACATAGTTGCATATGAA+AGG	0.547120	8.4:-80430506	None:intergenic
AAAGTTAACAAGTCAAACAT+TGG	0.556528	8.4:+80430109	MS.gene022561:CDS
GATTCGACAAATTTAAAACA+TGG	0.566903	8.4:-80430389	None:intergenic
TTCAACTTCAAGAGATGGTG+AGG	0.578382	8.4:-80429579	None:intergenic
AAATCAGTGAAATGGTTGCA+AGG	0.586489	8.4:-80430152	None:intergenic
ACAGTTGAACTAACTCTCCA+AGG	0.590172	8.4:-80430764	None:intergenic
ATCAAGAGAAACAGAAACAA+AGG	0.600906	8.4:+80429667	MS.gene022561:CDS
GCTTGGTCTACATTCAAATG+CGG	0.614751	8.4:-80430425	None:intergenic
ATGAACATTATAATAACTGG+TGG	0.615438	8.4:+80430699	MS.gene022561:CDS
GGATTTACAAAATGACACAA+AGG	0.620547	8.4:+80429928	MS.gene022561:CDS
TGGTCTTTGCAAATATGTTG+TGG	0.629307	8.4:+80430637	MS.gene022561:CDS
TTGATTATGTGCTGAATCTG+TGG	0.644996	8.4:-80429501	None:intergenic
TTATATGGGAATGTTAAGGT+CGG	0.661560	8.4:+80430727	MS.gene022561:CDS
TTTGGAGGAATTACACAGAG+GGG	0.718017	8.4:+80429989	MS.gene022561:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGAATGAACATTATAATAAC+TGG	+	chr8.4:80430696-80430715	MS.gene022561:CDS	20.0%
!!!	AAATAAACAAACTTTAGCTT+TGG	+	chr8.4:80429719-80429738	MS.gene022561:CDS	20.0%
!	AAAGTTAACAAGTCAAACAT+TGG	+	chr8.4:80430109-80430128	MS.gene022561:CDS	25.0%
!	AACATTATATGGGAATGTTA+AGG	+	chr8.4:80430723-80430742	MS.gene022561:CDS	25.0%
!	ATCTAATCAAATCAGTGAAA+TGG	-	chr8.4:80430163-80430182	None:intergenic	25.0%
!	ATGAACATTATAATAACTGG+TGG	+	chr8.4:80430699-80430718	MS.gene022561:CDS	25.0%
!	ATTTCATGTTTACAACATCA+TGG	+	chr8.4:80429907-80429926	MS.gene022561:CDS	25.0%
!	GATTTACAAAATGACACAAA+GGG	+	chr8.4:80429929-80429948	MS.gene022561:CDS	25.0%
!	TGAAAAATGTTGCATTTACA+AGG	+	chr8.4:80429554-80429573	MS.gene022561:CDS	25.0%
!	TTGTTATGGAAAGATCATTA+AGG	+	chr8.4:80430670-80430689	MS.gene022561:CDS	25.0%
!!	CAACATTTTTCATGTAACAT+AGG	-	chr8.4:80429546-80429565	None:intergenic	25.0%
!!	GATTCGACAAATTTAAAACA+TGG	-	chr8.4:80430392-80430411	None:intergenic	25.0%
!!	GTCAATTTTCTTAGAGTTAT+TGG	+	chr8.4:80430818-80430837	MS.gene022561:CDS	25.0%
!!	TCAAATTCCTATGTTTGTTT+TGG	+	chr8.4:80429971-80429990	MS.gene022561:CDS	25.0%
	AACTGGTGGAAACATTATAT+GGG	+	chr8.4:80430713-80430732	MS.gene022561:CDS	30.0%
	AATTCCTCCAAAACAAACAT+AGG	-	chr8.4:80429981-80430000	None:intergenic	30.0%
	ACACCAAAGTTTATCTCAAT+TGG	+	chr8.4:80429615-80429634	MS.gene022561:CDS	30.0%
	AGTACATATTCTGGTCTAAA+AGG	-	chr8.4:80430245-80430264	None:intergenic	30.0%
	ATCAAGAGAAACAGAAACAA+AGG	+	chr8.4:80429667-80429686	MS.gene022561:CDS	30.0%
	CCAAGAGAAATTCAAGTAAA+GGG	+	chr8.4:80430194-80430213	MS.gene022561:CDS	30.0%
	GAAACATAGTTGCATATGAA+AGG	-	chr8.4:80430509-80430528	None:intergenic	30.0%
	GGATTTACAAAATGACACAA+AGG	+	chr8.4:80429928-80429947	MS.gene022561:CDS	30.0%
	TAACTGGTGGAAACATTATA+TGG	+	chr8.4:80430712-80430731	MS.gene022561:CDS	30.0%
	TCCAAGAGAAATTCAAGTAA+AGG	+	chr8.4:80430193-80430212	MS.gene022561:CDS	30.0%
	TGTTTCTCTTGATTAAGTTC+TGG	-	chr8.4:80429660-80429679	None:intergenic	30.0%
	TTATATGGGAATGTTAAGGT+CGG	+	chr8.4:80430727-80430746	MS.gene022561:CDS	30.0%
!	ATTAGTTTCGAGAAAGTTCA+AGG	+	chr8.4:80430296-80430315	MS.gene022561:CDS	30.0%
!	GTGTTATTAGCTGAAAAGAA+TGG	+	chr8.4:80430011-80430030	MS.gene022561:CDS	30.0%
!	GTTAGACTCAGTTTTCATAA+TGG	+	chr8.4:80429842-80429861	MS.gene022561:CDS	30.0%
!!	AAAGGTGTGAAACTTTTTGA+TGG	-	chr8.4:80430227-80430246	None:intergenic	30.0%
!!!	AAAGGTACTTTCATGCTTTT+TGG	+	chr8.4:80429685-80429704	MS.gene022561:CDS	30.0%
!!!	AATTCCTATGTTTGTTTTGG+AGG	+	chr8.4:80429974-80429993	MS.gene022561:CDS	30.0%
!!!	GTTTGACTTGTTAACTTTTG+AGG	-	chr8.4:80430107-80430126	None:intergenic	30.0%
	AAATCAGTGAAATGGTTGCA+AGG	-	chr8.4:80430155-80430174	None:intergenic	35.0%
	AACATAGGCTCAATGATTTC+TGG	-	chr8.4:80429531-80429550	None:intergenic	35.0%
	AAGCAACAGAATGTGTTCTT+AGG	+	chr8.4:80430444-80430463	MS.gene022561:CDS	35.0%
	AGAGTTAGTTCAACTGTTGT+TGG	+	chr8.4:80430770-80430789	MS.gene022561:CDS	35.0%
	ATCCTGACAAAGTTCTTGTT+TGG	-	chr8.4:80429799-80429818	None:intergenic	35.0%
	CACAAAAACCAGCTCAAAAT+CGG	-	chr8.4:80430356-80430375	None:intergenic	35.0%
	CATAGTTGCATATGAAAGGT+TGG	-	chr8.4:80430505-80430524	None:intergenic	35.0%
	CCCTTTACTTGAATTTCTCT+TGG	-	chr8.4:80430197-80430216	None:intergenic	35.0%
	CTTCATTCAACTTCAAGAGA+TGG	-	chr8.4:80429587-80429606	None:intergenic	35.0%
	GAAATCATTAGCCATGAACT+TGG	+	chr8.4:80430584-80430603	MS.gene022561:CDS	35.0%
	GAATGGTTGCAATAGCAATA+AGG	+	chr8.4:80430028-80430047	MS.gene022561:CDS	35.0%
	GCTGTTCTTAGTACATATTC+TGG	-	chr8.4:80430254-80430273	None:intergenic	35.0%
	GGACCAATTGAGATAAACTT+TGG	-	chr8.4:80429621-80429640	None:intergenic	35.0%
	GTGGTGACATCAAATTGTTA+TGG	+	chr8.4:80430656-80430675	MS.gene022561:CDS	35.0%
	TAAGAACACATTCTGTTGCT+TGG	-	chr8.4:80430445-80430464	None:intergenic	35.0%
	TCTGGATTCTGACTATGAAA+AGG	-	chr8.4:80429642-80429661	None:intergenic	35.0%
	TGGTCTTTGCAAATATGTTG+TGG	+	chr8.4:80430637-80430656	MS.gene022561:CDS	35.0%
	TTCCAAACAAGAACTTTGTC+AGG	+	chr8.4:80429794-80429813	MS.gene022561:CDS	35.0%
	TTGATTATGTGCTGAATCTG+TGG	-	chr8.4:80429504-80429523	None:intergenic	35.0%
!	ACATGAAGATGTTGAGTTGT+TGG	+	chr8.4:80430553-80430572	MS.gene022561:CDS	35.0%
!	GAATTGGCAACATTGGTTAA+TGG	+	chr8.4:80430617-80430636	MS.gene022561:CDS	35.0%
!	TTGTCAGGATGAGAAGTTTT+TGG	+	chr8.4:80429809-80429828	MS.gene022561:CDS	35.0%
!!	TTTTGGAGGAATTACACAGA+GGG	+	chr8.4:80429988-80430007	MS.gene022561:CDS	35.0%
	ACAGTTGAACTAACTCTCCA+AGG	-	chr8.4:80430767-80430786	None:intergenic	40.0%
	ACTTGGAAGTCATGCAGAAT+TGG	+	chr8.4:80430601-80430620	MS.gene022561:CDS	40.0%
	CTTGGTCTACATTCAAATGC+GGG	-	chr8.4:80430427-80430446	None:intergenic	40.0%
	GCTTGGTCTACATTCAAATG+CGG	-	chr8.4:80430428-80430447	None:intergenic	40.0%
	TCATGCAGAATTGGCAACAT+TGG	+	chr8.4:80430610-80430629	MS.gene022561:CDS	40.0%
	TTCAACTTCAAGAGATGGTG+AGG	-	chr8.4:80429582-80429601	None:intergenic	40.0%
	TTTGGAGGAATTACACAGAG+GGG	+	chr8.4:80429989-80430008	MS.gene022561:CDS	40.0%
!!!	GTTTTGGAGGAATTACACAG+AGG	+	chr8.4:80429987-80430006	MS.gene022561:CDS	40.0%
!!!	TTGAGCTGGTTTTTGTGCTT+AGG	+	chr8.4:80430359-80430378	MS.gene022561:CDS	40.0%
	CTGCATGACTTCCAAGTTCA+TGG	-	chr8.4:80430598-80430617	None:intergenic	45.0%
	GCTACAAAGTTGAGTGAAGC+AGG	+	chr8.4:80430272-80430291	MS.gene022561:CDS	45.0%
!	CGGTGTATTTTCGTGATCCT+TGG	+	chr8.4:80430747-80430766	MS.gene022561:CDS	45.0%
!!!	AGAAGACGCCGATTTTGAGC+TGG	+	chr8.4:80430345-80430364	MS.gene022561:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.4	gene	80429483	80430859	80429483	ID=MS.gene022561
chr8.4	mRNA	80429483	80430859	80429483	ID=MS.gene022561.t1;Parent=MS.gene022561
chr8.4	exon	80429483	80430859	80429483	ID=MS.gene022561.t1.exon1;Parent=MS.gene022561.t1
chr8.4	CDS	80429483	80430859	80429483	ID=cds.MS.gene022561.t1;Parent=MS.gene022561.t1

Gene Sequence

>MS.gene022561

ATGGGTTCTGAAACTATACCACAGATTCAGCACATAATCAACATTCCAGAAATCATTGAGCCTATGTTACATGAAAAATGTTGCATTTACAAGGTTCCTCACCATCTCTTGAAGTTGAATGAAGATGCTTTTACACCAAAGTTTATCTCAATTGGTCCTTTTCATAGTCAGAATCCAGAACTTAATCAAGAGAAACAGAAACAAAGGTACTTTCATGCTTTTTGGAAACGTTTATCAAATAAACAAACTTTAGCTTTGGTACAATATAAAGCTTTTCTTGAAGAAAACAGAGAAAATATTGCTAATTGTTATTCCAAACAAGAACTTTGTCAGGATGAGAAGTTTTTGGAAATGATTTTGTTAGACTCAGTTTTCATAATGGAGTTGTTTTTGAGAAAAGTTAATGAATCTGAACAGAAAAATGATTTCATGTTTACAACATCATGGATTTACAAAATGACACAAAGGGATTTGTTGCTGCTTGAAAATCAAATTCCTATGTTTGTTTTGGAGGAATTACACAGAGGGGTGTTATTAGCTGAAAAGAATGGTTGCAATAGCAATAAGGAAAATTCTGCTAGTTTTATTGATCTTGCTTTTAACTACTTTGAAGATTATTATCCTCAAAAGTTAACAAGTCAAACATTGGAGTTGACTCAAAATTGCAAACCTTGCAACCATTTCACTGATTTGATTAGATATACTTATCTTCCAAGAGAAATTCAAGTAAAGGGTGTGAATCCATCAAAAAGTTTCACACCTTTTAGACCAGAATATGTACTAAGAACAGCTACAAAGTTGAGTGAAGCAGGTATTAGTTTCGAGAAAGTTCAAGGTAAAAGCTATTGTGACTTAAAGTTTAAGAAGACGCCGATTTTGAGCTGGTTTTTGTGCTTAGGTTGTGTACCATGTTTTAAATTTGTCGAATCTAAGTTACAAATCCCGCATTTGAATGTAGACCAAGCAACAGAATGTGTTCTTAGGAACTTAATCGCGTTCGAACAATGTCACTATTCAGACCAACCTTTCATATGCAACTATGTTTCTTTAATTGATTCTTTGATTCATACACATGAAGATGTTGAGTTGTTGGTTGACACAGAAATCATTAGCCATGAACTTGGAAGTCATGCAGAATTGGCAACATTGGTTAATGGTCTTTGCAAATATGTTGTGGTGACATCAAATTGTTATGGAAAGATCATTAAGGAAATGAATGAACATTATAATAACTGGTGGAAACATTATATGGGAATGTTAAGGTCGGTGTATTTTCGTGATCCTTGGAGAGTTAGTTCAACTGTTGTTGGAATTGCTATTTTCTTATTTGCTGCTGTCAATTTTCTTAGAGTTATTGGTGTATTTCGTTTGAAGTAG

Protein sequence

>MS.gene022561.t1

MGSETIPQIQHIINIPEIIEPMLHEKCCIYKVPHHLLKLNEDAFTPKFISIGPFHSQNPELNQEKQKQRYFHAFWKRLSNKQTLALVQYKAFLEENRENIANCYSKQELCQDEKFLEMILLDSVFIMELFLRKVNESEQKNDFMFTTSWIYKMTQRDLLLLENQIPMFVLEELHRGVLLAEKNGCNSNKENSASFIDLAFNYFEDYYPQKLTSQTLELTQNCKPCNHFTDLIRYTYLPREIQVKGVNPSKSFTPFRPEYVLRTATKLSEAGISFEKVQGKSYCDLKFKKTPILSWFLCLGCVPCFKFVESKLQIPHLNVDQATECVLRNLIAFEQCHYSDQPFICNYVSLIDSLIHTHEDVELLVDTEIISHELGSHAELATLVNGLCKYVVVTSNCYGKIIKEMNEHYNNWWKHYMGMLRSVYFRDPWRVSSTVVGIAIFLFAAVNFLRVIGVFRLK