AlfalfaGEDB | MS.gene91806

M. sativa cultivar XinJiangDaYe / MS.gene91806

KEGG: -
GO: -
PFAM: PF03140.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91806.t1	XP_013443756.1	94.8	458	24	0	1	458	1	458	1.00E-258	902.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91806.t1	Q9SD53	27.7	444	267	13	18	442	37	445	1.2e-32	142.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91806.t1	A0A072TKP8	94.8	458	24	0	1	458	1	458	7.5e-259	902.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049350	MS.gene91806	0.838815	2.30E-57	-1.69E-46
MS.gene050901	MS.gene91806	0.824401	8.24E-54	-1.69E-46
MS.gene051720	MS.gene91806	0.817602	3.03E-52	-1.69E-46
MS.gene053144	MS.gene91806	0.802582	5.24E-49	-1.69E-46
MS.gene053536	MS.gene91806	0.832311	1.02E-55	-1.69E-46
MS.gene053538	MS.gene91806	0.837212	5.94E-57	-1.69E-46
MS.gene054142	MS.gene91806	0.808696	2.73E-50	-1.69E-46
MS.gene055537	MS.gene91806	0.820156	7.96E-53	-1.69E-46
MS.gene05894	MS.gene91806	0.831105	2.02E-55	-1.69E-46
MS.gene059424	MS.gene91806	0.829504	4.96E-55	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene061336	MS.gene91806	PPI
MS.gene91806	MS.gene38854	PPI
MS.gene91806	MS.gene91809	PPI
MS.gene055356	MS.gene91806	PPI
MS.gene91806	MS.gene061337	PPI
MS.gene91806	MS.gene061334	PPI
MS.gene91806	MS.gene055358	PPI
MS.gene91806	MS.gene055357	PPI
MS.gene91806	MS.gene022560	PPI
MS.gene91807	MS.gene91806	PPI
MS.gene91806	MS.gene022561	PPI
MS.gene91806	MS.gene061335	PPI
MS.gene022559	MS.gene91806	PPI
MS.gene019468	MS.gene91806	PPI
MS.gene055354	MS.gene91806	PPI
MS.gene91806	MS.gene022562	PPI
MS.gene91806	MS.gene91808	PPI
MS.gene91805	MS.gene91806	PPI
MS.gene91806	MS.gene055359	PPI
MS.gene91806	MS.gene91805	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91806.t1	MTR_8g005265	94.760	458	24	0	1	458	1	458	0.0	887
MS.gene91806.t1	MTR_4g112660	73.016	441	37	5	22	458	1	363	0.0	619
MS.gene91806.t1	MTR_8g005225	60.131	459	164	10	4	455	13	459	0.0	526
MS.gene91806.t1	MTR_8g005235	50.655	458	206	7	1	454	1	442	9.92e-157	451
MS.gene91806.t1	MTR_8g005325	52.993	451	193	7	8	454	37	472	1.20e-156	452
MS.gene91806.t1	MTR_8g005295	43.922	510	206	12	9	455	19	511	4.15e-132	391
MS.gene91806.t1	MTR_0209s0060	47.640	445	199	10	9	449	11	425	5.60e-132	388
MS.gene91806.t1	MTR_0209s0030	47.640	445	199	10	9	449	11	425	5.60e-132	388
MS.gene91806.t1	MTR_8g006525	48.770	447	195	11	8	449	9	426	1.09e-130	385
MS.gene91806.t1	MTR_8g005285	45.030	493	211	13	9	455	19	497	1.37e-129	384
MS.gene91806.t1	MTR_0024s0080	36.145	415	212	15	28	438	26	391	3.96e-66	218
MS.gene91806.t1	MTR_6g010890	33.185	449	253	14	9	446	7	419	2.89e-64	213
MS.gene91806.t1	MTR_6g011060	33.484	442	238	13	17	446	15	412	7.95e-64	212
MS.gene91806.t1	MTR_6g010920	33.486	436	229	13	19	441	10	397	9.96e-64	211
MS.gene91806.t1	MTR_6g011050	32.857	420	229	10	25	438	22	394	5.73e-62	207
MS.gene91806.t1	MTR_6g009590	33.971	418	228	12	25	438	23	396	2.09e-61	206
MS.gene91806.t1	MTR_6g009610	33.333	417	232	9	25	438	23	396	8.03e-61	204
MS.gene91806.t1	MTR_3g107590	33.180	434	249	10	9	437	8	405	7.07e-59	199
MS.gene91806.t1	MTR_3g079390	30.603	464	254	12	9	446	22	443	7.60e-58	197
MS.gene91806.t1	MTR_6g010810	32.414	435	238	14	20	446	15	401	8.04e-58	196
MS.gene91806.t1	MTR_6g009170	34.192	427	233	15	20	437	18	405	1.31e-57	196
MS.gene91806.t1	MTR_5g016570	30.490	469	249	15	7	433	74	507	7.72e-43	159
MS.gene91806.t1	MTR_2g035640	30.412	388	218	10	64	446	2	342	7.63e-42	152
MS.gene91806.t1	MTR_2g036320	27.804	428	264	14	24	443	64	454	1.26e-41	155
MS.gene91806.t1	MTR_6g010850	32.143	364	198	11	98	457	33	351	1.91e-40	149
MS.gene91806.t1	MTR_2g041180	27.869	427	266	15	24	443	47	438	2.53e-39	148
MS.gene91806.t1	MTR_5g086340	27.918	437	258	12	23	444	28	422	1.26e-37	143
MS.gene91806.t1	MTR_7g011980	32.917	240	124	6	213	444	123	333	1.50e-29	118
MS.gene91806.t1	MTR_7g011980	36.000	150	66	3	20	169	18	137	1.89e-18	86.7
MS.gene91806.t1	MTR_6g009580	34.112	214	116	5	226	437	29	219	2.48e-28	112
MS.gene91806.t1	MTR_8g042830	25.778	450	239	14	14	444	30	403	1.16e-26	111
MS.gene91806.t1	MTR_5g087580	30.653	199	117	2	258	455	39	217	2.02e-21	92.8
MS.gene91806.t1	MTR_5g086260	28.829	222	131	4	241	455	110	311	2.29e-20	92.0
MS.gene91806.t1	MTR_6g009600	36.364	132	65	2	261	392	22	134	8.76e-20	86.3
MS.gene91806.t1	MTR_7g060840	23.364	428	270	10	41	451	42	428	1.84e-19	90.9
MS.gene91806.t1	MTR_8g042170	25.561	446	268	17	29	438	26	443	2.74e-19	90.5
MS.gene91806.t1	MTR_7g060020	24.235	425	258	14	44	452	48	424	6.90e-19	89.0
MS.gene91806.t1	MTR_7g059810	24.337	415	257	12	41	431	42	423	2.60e-17	84.3
MS.gene91806.t1	MTR_7g059540	23.293	498	284	17	1	442	2	457	8.05e-17	82.8
MS.gene91806.t1	MTR_7g059510	23.620	453	248	16	29	452	31	414	1.34e-16	82.0
MS.gene91806.t1	MTR_7g060260	22.991	448	280	13	1	429	2	403	6.07e-16	80.1
MS.gene91806.t1	MTR_7g060115	22.561	492	293	18	1	452	1	444	1.10e-15	79.3
MS.gene91806.t1	MTR_7g060310	22.768	448	302	12	41	451	43	483	3.82e-15	77.8
MS.gene91806.t1	MTR_7g059520	29.091	165	100	3	262	425	5	153	4.57e-15	73.6
MS.gene91806.t1	MTR_0182s0060	30.366	191	112	5	262	451	342	512	5.51e-15	77.4
MS.gene91806.t1	MTR_5g086230	31.953	169	105	5	14	173	14	181	7.52e-15	73.6
MS.gene91806.t1	MTR_7g059540	28.415	183	113	4	262	442	300	466	1.99e-14	75.5
MS.gene91806.t1	MTR_7g446270	22.970	505	275	18	1	432	1	464	2.93e-14	75.1
MS.gene91806.t1	MTR_7g059525	30.496	141	96	2	304	442	134	274	5.42e-14	72.8
MS.gene91806.t1	MTR_7g060220	22.970	431	262	15	29	431	27	415	1.39e-13	72.8
MS.gene91806.t1	MTR_7g060320	27.811	169	105	3	262	429	289	441	2.32e-13	72.4
MS.gene91806.t1	MTR_1g040690	24.757	412	252	14	25	411	25	403	2.85e-13	72.0
MS.gene91806.t1	MTR_7g060080	26.776	183	116	3	262	442	16	182	6.00e-13	67.8
MS.gene91806.t1	MTR_7g060160	24.213	413	255	11	41	452	41	396	7.73e-13	70.5
MS.gene91806.t1	MTR_7g059480	27.465	142	102	1	304	444	624	765	1.63e-12	70.1
MS.gene91806.t1	MTR_3g107600	27.230	213	107	6	227	438	406	571	1.73e-12	70.1
MS.gene91806.t1	MTR_7g017620	25.668	187	118	3	258	443	364	530	1.20e-11	67.0
MS.gene91806.t1	MTR_3g466740	27.822	381	196	19	29	370	32	372	1.85e-11	66.2
MS.gene91806.t1	MTR_2g036310	28.889	135	93	2	311	443	15	148	5.69e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91806.t1	AT2G28580	30.455	440	251	11	25	446	39	441	2.30e-54	188
MS.gene91806.t1	AT2G28580	30.455	440	251	11	25	446	107	509	1.35e-53	188
MS.gene91806.t1	AT2G28580	30.455	440	251	11	25	446	121	523	1.81e-53	188
MS.gene91806.t1	AT4G31980	30.788	419	241	13	23	437	289	662	9.16e-52	186
MS.gene91806.t1	AT2G28580	29.698	431	249	10	25	446	107	492	1.09e-51	182
MS.gene91806.t1	AT2G28580	29.698	431	249	10	25	446	121	506	1.33e-51	182
MS.gene91806.t1	AT2G44930	29.047	451	250	13	25	447	82	490	3.07e-50	179
MS.gene91806.t1	AT2G36430	30.900	411	240	15	27	429	45	419	3.88e-50	177
MS.gene91806.t1	AT1G67150	28.146	437	257	13	22	444	1	394	1.20e-43	158
MS.gene91806.t1	AT1G67150	28.146	437	257	13	22	444	1	394	1.20e-43	158
MS.gene91806.t1	AT3G50120	27.212	452	270	11	20	444	96	515	1.34e-43	160
MS.gene91806.t1	AT3G50170	27.740	447	260	11	26	444	112	523	4.46e-43	159
MS.gene91806.t1	AT1G67150	27.891	441	257	13	22	444	1	398	4.99e-43	157
MS.gene91806.t1	AT5G11290	25.556	450	288	11	2	446	6	413	5.49e-43	157
MS.gene91806.t1	AT3G50150	25.847	472	290	12	12	456	68	506	1.24e-41	155
MS.gene91806.t1	AT3G50140	28.062	449	258	14	25	444	111	523	7.19e-41	153
MS.gene91806.t1	AT3G50160	26.517	445	266	12	25	456	102	498	6.72e-40	150
MS.gene91806.t1	AT3G50130	27.938	451	258	13	12	429	117	533	1.90e-38	147
MS.gene91806.t1	AT3G47200	28.090	445	265	13	18	442	37	446	2.64e-38	145
MS.gene91806.t1	AT3G47200	28.090	445	265	13	18	442	37	446	2.64e-38	145
MS.gene91806.t1	AT3G50180	28.539	438	252	15	26	444	177	572	3.72e-37	144
MS.gene91806.t1	AT1G65985	28.381	451	234	15	28	429	15	425	1.16e-36	140
MS.gene91806.t1	AT1G65985	28.381	451	234	15	28	429	15	425	1.16e-36	140
MS.gene91806.t1	AT3G47250	26.154	455	266	14	18	444	52	464	5.36e-36	139
MS.gene91806.t1	AT3G47250	26.154	455	266	14	18	444	52	464	5.36e-36	139
MS.gene91806.t1	AT3G47250	26.154	455	266	14	18	444	52	464	5.36e-36	139
MS.gene91806.t1	AT2G28580	30.769	364	197	11	25	370	121	447	7.41e-36	138
MS.gene91806.t1	AT3G47210	27.901	405	245	11	18	413	84	450	1.13e-33	132
MS.gene91806.t1	AT5G22550	25.536	466	283	13	27	450	44	487	8.49e-32	127
MS.gene91806.t1	AT5G22540	26.024	415	261	11	25	429	29	407	1.61e-30	123
MS.gene91806.t1	AT3G50190	27.315	432	254	14	25	444	94	477	2.53e-30	123
MS.gene91806.t1	AT5G11290	23.377	385	251	9	64	446	2	344	1.10e-27	113
MS.gene91806.t1	AT1G67150	24.541	436	231	16	22	444	1	351	4.02e-26	109
MS.gene91806.t1	AT5G22560	28.390	236	134	6	24	240	44	263	5.85e-25	107
MS.gene91806.t1	AT3G44710	31.466	232	135	9	15	238	34	249	2.85e-22	99.8
MS.gene91806.t1	AT3G50170	26.298	289	172	9	26	288	112	385	4.70e-20	92.4
MS.gene91806.t1	AT3G60470	31.053	190	110	3	264	452	365	534	7.28e-20	92.8
MS.gene91806.t1	AT3G60470	32.222	180	93	5	21	173	26	203	1.74e-16	82.4
MS.gene91806.t1	AT3G50140	28.179	291	166	11	25	288	111	385	3.01e-18	87.0
MS.gene91806.t1	AT3G50150	23.188	345	218	12	25	338	88	416	2.25e-17	84.7
MS.gene91806.t1	AT3G02645	27.374	179	111	2	254	431	338	498	1.78e-15	79.0
MS.gene91806.t1	AT3G50190	26.296	270	166	10	25	288	94	336	4.27e-13	70.9
MS.gene91806.t1	AT3G50190	26.296	270	166	10	25	288	94	336	4.27e-13	70.9
MS.gene91806.t1	AT3G50190	26.296	270	166	10	25	288	94	336	5.39e-13	70.5

Find 55 sgRNAs with CRISPR-Local

Find 71 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCAAATTCCTATGTTTATTT+TGG	0.091254	8.3:+81492749	MS.gene91806:CDS
AAAGGTACTTTCATGCATTT+TGG	0.130004	8.3:+81492463	MS.gene91806:CDS
AACATAGGCTCAATGATTTC+TGG	0.230505	8.3:-81492306	None:intergenic
TAACTGGTGGAAACATTATA+TGG	0.253364	8.3:+81493490	MS.gene91806:CDS
AGTACATATTCTGGTCTAAA+AGG	0.297271	8.3:-81493020	None:intergenic
GCTGTTCTTAGTACATATTC+TGG	0.309895	8.3:-81493029	None:intergenic
CTGCATGACTTCCAAGTTCA+TGG	0.314386	8.3:-81493373	None:intergenic
TGTTTCTCTTGATTAAGTTC+TGG	0.332904	8.3:-81492435	None:intergenic
TCCAAGAGAAATTCAAGTTA+AGG	0.333547	8.3:+81492971	MS.gene91806:CDS
ATCCTGGCAAAGTTCTTGTT+TGG	0.335574	8.3:-81492574	None:intergenic
GAATTGGCAACATTGGTAAA+TGG	0.343095	8.3:+81493395	MS.gene91806:CDS
AAGCAACAGAATGTGTTCTT+AGG	0.348136	8.3:+81493222	MS.gene91806:CDS
CCAAGAGAAATTCAAGTTAA+GGG	0.361703	8.3:+81492972	MS.gene91806:CDS
ACACCAAAGTTTATCTCAAT+AGG	0.368142	8.3:+81492393	MS.gene91806:CDS
TGAATGAACATTATAATAAC+TGG	0.371937	8.3:+81493474	MS.gene91806:CDS
GACATTGTTCGAACGCGATT+AGG	0.372840	8.3:-81493247	None:intergenic
AAATAAACAAACTTTAGCTT+TGG	0.384668	8.3:+81492497	MS.gene91806:CDS
CCCTTAACTTGAATTTCTCT+TGG	0.389209	8.3:-81492972	None:intergenic
TTGTTATGGAAAGATCATTA+AGG	0.389525	8.3:+81493448	MS.gene91806:CDS
GAATGGTTGCAATAGCAATA+AGG	0.400363	8.3:+81492806	MS.gene91806:CDS
ACTTGGAAGTCATGCAGAAT+TGG	0.403752	8.3:+81493379	MS.gene91806:CDS
ATCTAATCAAATCAGTGAAA+TGG	0.406351	8.3:-81492938	None:intergenic
GGACCTATTGAGATAAACTT+TGG	0.441928	8.3:-81492396	None:intergenic
ACATGAAGATGTTGAGTTGT+TGG	0.443426	8.3:+81493331	MS.gene91806:CDS
ATTTCATGTTTACAACATCA+TGG	0.446527	8.3:+81492685	MS.gene91806:CDS
AGAGTTAGTTCAACTGTTGT+TGG	0.459714	8.3:+81493548	MS.gene91806:CDS
TAAGAACACATTCTGTTGCT+TGG	0.460229	8.3:-81493220	None:intergenic
TTCCAAACAAGAACTTTGCC+AGG	0.463658	8.3:+81492572	MS.gene91806:CDS
AACATTATATGGGAATGTTA+AGG	0.469604	8.3:+81493501	MS.gene91806:CDS
ATTAGTTTCGAGAAAGTTCA+AGG	0.472626	8.3:+81493074	MS.gene91806:CDS
GTGGTGACATCAAATTGTTA+TGG	0.484272	8.3:+81493434	MS.gene91806:CDS
GAAATCATTAGCCATGAACT+TGG	0.500879	8.3:+81493362	MS.gene91806:CDS
GCTACAAAGTTGAGTGAAGC+AGG	0.504844	8.3:+81493050	MS.gene91806:CDS
CATAGTTGCATATGAAAGGT+TGG	0.506971	8.3:-81493280	None:intergenic
TCTGGATTCTGACTATGAAA+AGG	0.511649	8.3:-81492417	None:intergenic
AACTGGTGGAAACATTATAT+GGG	0.515685	8.3:+81493491	MS.gene91806:CDS
CTTGGTCTACATTCAAATGA+GGG	0.527598	8.3:-81493202	None:intergenic
CTTCATTCAACTTCAAGAGA+TGG	0.534037	8.3:-81492362	None:intergenic
GCTTGGTCTACATTCAAATG+AGG	0.535531	8.3:-81493203	None:intergenic
GTGTTATTAGCTGAAAAGAA+TGG	0.538677	8.3:+81492789	MS.gene91806:CDS
GAAACATAGTTGCATATGAA+AGG	0.547120	8.3:-81493284	None:intergenic
AATTCCTCCAAAATAAACAT+AGG	0.557088	8.3:-81492756	None:intergenic
TCATGCAGAATTGGCAACAT+TGG	0.557270	8.3:+81493388	MS.gene91806:CDS
GATTCGACAAATTTAAAACA+TGG	0.566903	8.3:-81493167	None:intergenic
TTCAACTTCAAGAGATGGTG+AGG	0.578382	8.3:-81492357	None:intergenic
AAATCAGTGAAATGGTTGCA+AGG	0.586489	8.3:-81492930	None:intergenic
ACAGTTGAACTAACTCTCCA+AGG	0.590172	8.3:-81493542	None:intergenic
ATCAAGAGAAACAGAAACAA+AGG	0.600906	8.3:+81492445	MS.gene91806:CDS
ATGAACATTATAATAACTGG+TGG	0.615438	8.3:+81493477	MS.gene91806:CDS
GATTTACAAAATGACACAGA+GGG	0.630083	8.3:+81492707	MS.gene91806:CDS
TTGATTATGTGCTGAATCTG+TGG	0.644996	8.3:-81492279	None:intergenic
TGGTCTTTGCAAATATGTTG+TGG	0.649266	8.3:+81493415	MS.gene91806:CDS
TTATATGGGAATGTTAAGGT+CGG	0.661560	8.3:+81493505	MS.gene91806:CDS
TTTGGAGGAATTACACAGAG+GGG	0.695602	8.3:+81492767	MS.gene91806:CDS
GGATTTACAAAATGACACAG+AGG	0.748966	8.3:+81492706	MS.gene91806:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAGTTAACAAGTCAAAAAT+TGG	+	chr8.3:81492887-81492906	MS.gene91806:CDS	20.0%
!!	TGAATGAACATTATAATAAC+TGG	+	chr8.3:81493474-81493493	MS.gene91806:CDS	20.0%
!!!	AAATAAACAAACTTTAGCTT+TGG	+	chr8.3:81492497-81492516	MS.gene91806:CDS	20.0%
!!!	TCAAATTCCTATGTTTATTT+TGG	+	chr8.3:81492749-81492768	MS.gene91806:CDS	20.0%
!	AACATTATATGGGAATGTTA+AGG	+	chr8.3:81493501-81493520	MS.gene91806:CDS	25.0%
!	AATTCCTCCAAAATAAACAT+AGG	-	chr8.3:81492759-81492778	None:intergenic	25.0%
!	ATCTAATCAAATCAGTGAAA+TGG	-	chr8.3:81492941-81492960	None:intergenic	25.0%
!	ATGAACATTATAATAACTGG+TGG	+	chr8.3:81493477-81493496	MS.gene91806:CDS	25.0%
!	ATTTCATGTTTACAACATCA+TGG	+	chr8.3:81492685-81492704	MS.gene91806:CDS	25.0%
!	TGAAAAATGTTGCATTTACA+AGG	+	chr8.3:81492332-81492351	MS.gene91806:CDS	25.0%
!	TTGTTATGGAAAGATCATTA+AGG	+	chr8.3:81493448-81493467	MS.gene91806:CDS	25.0%
!!	CAACATTTTTCATGTAACAT+AGG	-	chr8.3:81492324-81492343	None:intergenic	25.0%
!!	GATTCGACAAATTTAAAACA+TGG	-	chr8.3:81493170-81493189	None:intergenic	25.0%
!!	GTCAATTTTCTTAGAGTTAT+TGG	+	chr8.3:81493596-81493615	MS.gene91806:CDS	25.0%
!!!	AATTCCTATGTTTATTTTGG+AGG	+	chr8.3:81492752-81492771	MS.gene91806:CDS	25.0%
!!!	TTTTGACTTGTTAACTTTTG+AGG	-	chr8.3:81492885-81492904	None:intergenic	25.0%
	AACTGGTGGAAACATTATAT+GGG	+	chr8.3:81493491-81493510	MS.gene91806:CDS	30.0%
	ACACCAAAGTTTATCTCAAT+AGG	+	chr8.3:81492393-81492412	MS.gene91806:CDS	30.0%
	AGTACATATTCTGGTCTAAA+AGG	-	chr8.3:81493023-81493042	None:intergenic	30.0%
	ATCAAGAGAAACAGAAACAA+AGG	+	chr8.3:81492445-81492464	MS.gene91806:CDS	30.0%
	GAAACATAGTTGCATATGAA+AGG	-	chr8.3:81493287-81493306	None:intergenic	30.0%
	GATTTACAAAATGACACAGA+GGG	+	chr8.3:81492707-81492726	MS.gene91806:CDS	30.0%
	TAACTGGTGGAAACATTATA+TGG	+	chr8.3:81493490-81493509	MS.gene91806:CDS	30.0%
	TGTTTCTCTTGATTAAGTTC+TGG	-	chr8.3:81492438-81492457	None:intergenic	30.0%
	TTATATGGGAATGTTAAGGT+CGG	+	chr8.3:81493505-81493524	MS.gene91806:CDS	30.0%
!	ATTAGTTTCGAGAAAGTTCA+AGG	+	chr8.3:81493074-81493093	MS.gene91806:CDS	30.0%
!	CCAAGAGAAATTCAAGTTAA+GGG	+	chr8.3:81492972-81492991	MS.gene91806:CDS	30.0%
!	GTGTTATTAGCTGAAAAGAA+TGG	+	chr8.3:81492789-81492808	MS.gene91806:CDS	30.0%
!	GTTAGACTCAGTTTTCATAA+TGG	+	chr8.3:81492620-81492639	MS.gene91806:CDS	30.0%
!	TCCAAGAGAAATTCAAGTTA+AGG	+	chr8.3:81492971-81492990	MS.gene91806:CDS	30.0%
!!	AAAGGTGTGAAACTTTTTGA+TGG	-	chr8.3:81493005-81493024	None:intergenic	30.0%
!!!	AAAGGTACTTTCATGCATTT+TGG	+	chr8.3:81492463-81492482	MS.gene91806:CDS	30.0%
	AAATCAGTGAAATGGTTGCA+AGG	-	chr8.3:81492933-81492952	None:intergenic	35.0%
	AACATAGGCTCAATGATTTC+TGG	-	chr8.3:81492309-81492328	None:intergenic	35.0%
	AAGCAACAGAATGTGTTCTT+AGG	+	chr8.3:81493222-81493241	MS.gene91806:CDS	35.0%
	AGAGTTAGTTCAACTGTTGT+TGG	+	chr8.3:81493548-81493567	MS.gene91806:CDS	35.0%
	CACAAAAACCAGCTCAAAAT+CGG	-	chr8.3:81493134-81493153	None:intergenic	35.0%
	CATAGTTGCATATGAAAGGT+TGG	-	chr8.3:81493283-81493302	None:intergenic	35.0%
	CTTCATTCAACTTCAAGAGA+TGG	-	chr8.3:81492365-81492384	None:intergenic	35.0%
	CTTGGTCTACATTCAAATGA+GGG	-	chr8.3:81493205-81493224	None:intergenic	35.0%
	GAAATCATTAGCCATGAACT+TGG	+	chr8.3:81493362-81493381	MS.gene91806:CDS	35.0%
	GAATGGTTGCAATAGCAATA+AGG	+	chr8.3:81492806-81492825	MS.gene91806:CDS	35.0%
	GAATTGGCAACATTGGTAAA+TGG	+	chr8.3:81493395-81493414	MS.gene91806:CDS	35.0%
	GCTGTTCTTAGTACATATTC+TGG	-	chr8.3:81493032-81493051	None:intergenic	35.0%
	GGACCTATTGAGATAAACTT+TGG	-	chr8.3:81492399-81492418	None:intergenic	35.0%
	GGATTTACAAAATGACACAG+AGG	+	chr8.3:81492706-81492725	MS.gene91806:CDS	35.0%
	GTGGTGACATCAAATTGTTA+TGG	+	chr8.3:81493434-81493453	MS.gene91806:CDS	35.0%
	TAAGAACACATTCTGTTGCT+TGG	-	chr8.3:81493223-81493242	None:intergenic	35.0%
	TCTGGATTCTGACTATGAAA+AGG	-	chr8.3:81492420-81492439	None:intergenic	35.0%
	TGGTCTTTGCAAATATGTTG+TGG	+	chr8.3:81493415-81493434	MS.gene91806:CDS	35.0%
	TTGATTATGTGCTGAATCTG+TGG	-	chr8.3:81492282-81492301	None:intergenic	35.0%
	TTTCCAAAAACTTCTCATCC+TGG	-	chr8.3:81492593-81492612	None:intergenic	35.0%
!	ACATGAAGATGTTGAGTTGT+TGG	+	chr8.3:81493331-81493350	MS.gene91806:CDS	35.0%
!	CCCTTAACTTGAATTTCTCT+TGG	-	chr8.3:81492975-81492994	None:intergenic	35.0%
!!	ATTTTGGAGGAATTACACAG+AGG	+	chr8.3:81492765-81492784	MS.gene91806:CDS	35.0%
!!	TTTTGGAGGAATTACACAGA+GGG	+	chr8.3:81492766-81492785	MS.gene91806:CDS	35.0%
	ACAGTTGAACTAACTCTCCA+AGG	-	chr8.3:81493545-81493564	None:intergenic	40.0%
	ACTTGGAAGTCATGCAGAAT+TGG	+	chr8.3:81493379-81493398	MS.gene91806:CDS	40.0%
	ATCCTGGCAAAGTTCTTGTT+TGG	-	chr8.3:81492577-81492596	None:intergenic	40.0%
	GCTTGGTCTACATTCAAATG+AGG	-	chr8.3:81493206-81493225	None:intergenic	40.0%
	TCATGCAGAATTGGCAACAT+TGG	+	chr8.3:81493388-81493407	MS.gene91806:CDS	40.0%
	TTCAACTTCAAGAGATGGTG+AGG	-	chr8.3:81492360-81492379	None:intergenic	40.0%
	TTCCAAACAAGAACTTTGCC+AGG	+	chr8.3:81492572-81492591	MS.gene91806:CDS	40.0%
	TTTGGAGGAATTACACAGAG+GGG	+	chr8.3:81492767-81492786	MS.gene91806:CDS	40.0%
!	TTGCCAGGATGAGAAGTTTT+TGG	+	chr8.3:81492587-81492606	MS.gene91806:CDS	40.0%
!!!	TTGAGCTGGTTTTTGTGCTT+AGG	+	chr8.3:81493137-81493156	MS.gene91806:CDS	40.0%
	CTGCATGACTTCCAAGTTCA+TGG	-	chr8.3:81493376-81493395	None:intergenic	45.0%
	GACATTGTTCGAACGCGATT+AGG	-	chr8.3:81493250-81493269	None:intergenic	45.0%
	GCTACAAAGTTGAGTGAAGC+AGG	+	chr8.3:81493050-81493069	MS.gene91806:CDS	45.0%
!	CGGTGTATTTTCGTGATCCT+TGG	+	chr8.3:81493525-81493544	MS.gene91806:CDS	45.0%
!!!	AGAAGACGCCGATTTTGAGC+TGG	+	chr8.3:81493123-81493142	MS.gene91806:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.3	gene	81492261	81493637	81492261	ID=MS.gene91806
chr8.3	mRNA	81492261	81493637	81492261	ID=MS.gene91806.t1;Parent=MS.gene91806
chr8.3	exon	81492261	81493637	81492261	ID=MS.gene91806.t1.exon1;Parent=MS.gene91806.t1
chr8.3	CDS	81492261	81493637	81492261	ID=cds.MS.gene91806.t1;Parent=MS.gene91806.t1

Gene Sequence

>MS.gene91806

ATGGGTTCTGAAACTATACCACAGATTCAGCACATAATCAACATTCCAGAAATCATTGAGCCTATGTTACATGAAAAATGTTGCATTTACAAGGTTCCTCACCATCTCTTGAAGTTGAATGAAGATGCTTTTACACCAAAGTTTATCTCAATAGGTCCTTTTCATAGTCAGAATCCAGAACTTAATCAAGAGAAACAGAAACAAAGGTACTTTCATGCATTTTGGAAACGTTTATCAAATAAACAAACTTTAGCTTTGGTACAATATAAAGCTTTTCTTGAAGAAAACAGAGAAAATATTGCTAATTGTTATTCCAAACAAGAACTTTGCCAGGATGAGAAGTTTTTGGAAATGATTTTGTTAGACTCAGTTTTCATAATGGAGTTGTTTTTGAGAAAAGTTAATGAATCTGAACAGAAAAATGATTTCATGTTTACAACATCATGGATTTACAAAATGACACAGAGGGATTTGTTGCTGCTTGAAAATCAAATTCCTATGTTTATTTTGGAGGAATTACACAGAGGGGTGTTATTAGCTGAAAAGAATGGTTGCAATAGCAATAAGGAAAATTGTGCTAGTTTTATTGATCTTGCTTTTAACTACTTTGAAGATTATTATCCTCAAAAGTTAACAAGTCAAAAATTGGAGTTGACTCAAAATTGCAAACCTTGCAACCATTTCACTGATTTGATTAGATATACTTATCTTCCAAGAGAAATTCAAGTTAAGGGTGTGAATCCATCAAAAAGTTTCACACCTTTTAGACCAGAATATGTACTAAGAACAGCTACAAAGTTGAGTGAAGCAGGTATTAGTTTCGAGAAAGTTCAAGGTAAAAGCTATTGTGACTTAAAGTTTAAGAAGACGCCGATTTTGAGCTGGTTTTTGTGCTTAGGTTGTGTACCATGTTTTAAATTTGTCGAATCTAAGTTACGAATCCCTCATTTGAATGTAGACCAAGCAACAGAATGTGTTCTTAGGAACCTAATCGCGTTCGAACAATGTCACTATTCAGACCAACCTTTCATATGCAACTATGTTTCTTTAATTGATTCTTTGATTCATACACATGAAGATGTTGAGTTGTTGGTTGACACAGAAATCATTAGCCATGAACTTGGAAGTCATGCAGAATTGGCAACATTGGTAAATGGTCTTTGCAAATATGTTGTGGTGACATCAAATTGTTATGGAAAGATCATTAAGGAAATGAATGAACATTATAATAACTGGTGGAAACATTATATGGGAATGTTAAGGTCGGTGTATTTTCGTGATCCTTGGAGAGTTAGTTCAACTGTTGTTGGAATTGCTATTTTCTTATTTGCTGCTGTCAATTTTCTTAGAGTTATTGGTGTATTTCGTTTGAAGTAG

Protein sequence

>MS.gene91806.t1

MGSETIPQIQHIINIPEIIEPMLHEKCCIYKVPHHLLKLNEDAFTPKFISIGPFHSQNPELNQEKQKQRYFHAFWKRLSNKQTLALVQYKAFLEENRENIANCYSKQELCQDEKFLEMILLDSVFIMELFLRKVNESEQKNDFMFTTSWIYKMTQRDLLLLENQIPMFILEELHRGVLLAEKNGCNSNKENCASFIDLAFNYFEDYYPQKLTSQKLELTQNCKPCNHFTDLIRYTYLPREIQVKGVNPSKSFTPFRPEYVLRTATKLSEAGISFEKVQGKSYCDLKFKKTPILSWFLCLGCVPCFKFVESKLRIPHLNVDQATECVLRNLIAFEQCHYSDQPFICNYVSLIDSLIHTHEDVELLVDTEIISHELGSHAELATLVNGLCKYVVVTSNCYGKIIKEMNEHYNNWWKHYMGMLRSVYFRDPWRVSSTVVGIAIFLFAAVNFLRVIGVFRLK