AlfalfaGEDB | MS.gene91808

M. sativa cultivar XinJiangDaYe / MS.gene91808

KEGG: -
GO: -
PFAM: PF03140.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91808.t1	XP_013443757.1	82.8	500	65	4	1	481	1	498	3.00E-224	787.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91808.t1	Q9SD53	26.1	395	250	8	25	416	37	392	1.8e-23	112.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91808.t1	A0A072TK19	82.8	500	65	4	1	481	1	498	2.2e-224	787.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050020	MS.gene91808	0.807904	4.02E-50	-1.69E-46
MS.gene050137	MS.gene91808	0.80003	1.74E-48	-1.69E-46
MS.gene050787	MS.gene91808	0.802708	4.93E-49	-1.69E-46
MS.gene051265	MS.gene91808	0.836771	7.70E-57	-1.69E-46
MS.gene052020	MS.gene91808	0.81755	3.11E-52	-1.69E-46
MS.gene053147	MS.gene91808	0.807977	3.88E-50	-1.69E-46
MS.gene053221	MS.gene91808	0.801204	1.01E-48	-1.69E-46
MS.gene053584	MS.gene91808	0.80529	1.43E-49	-1.69E-46
MS.gene053641	MS.gene91808	0.815435	9.26E-52	-1.69E-46
MS.gene054291	MS.gene91808	-0.800924	1.15E-48	-1.69E-46
MS.gene054467	MS.gene91808	0.814089	1.84E-51	-1.69E-46
MS.gene054559	MS.gene91808	0.807221	5.62E-50	-1.69E-46
MS.gene054581	MS.gene91808	0.810638	1.04E-50	-1.69E-46
MS.gene055356	MS.gene91808	0.849348	3.43E-60	-1.69E-46
MS.gene055357	MS.gene91808	0.960459	1.40E-118	-1.69E-46
MS.gene055358	MS.gene91808	0.881614	2.07E-70	-1.69E-46
MS.gene055818	MS.gene91808	0.803835	2.88E-49	-1.69E-46
MS.gene056366	MS.gene91808	0.801953	7.06E-49	-1.69E-46
MS.gene057060	MS.gene91808	0.803584	3.25E-49	-1.69E-46
MS.gene059128	MS.gene91808	0.806994	6.28E-50	-1.69E-46
MS.gene059607	MS.gene91808	0.816575	5.15E-52	-1.69E-46
MS.gene060137	MS.gene91808	-0.817672	2.92E-52	-1.69E-46
MS.gene060322	MS.gene91808	0.803798	2.94E-49	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene022559	MS.gene91808	PPI
MS.gene022560	MS.gene91808	PPI
MS.gene061336	MS.gene91808	PPI
MS.gene055358	MS.gene91808	PPI
MS.gene91805	MS.gene91808	PPI
MS.gene055356	MS.gene91808	PPI
MS.gene022562	MS.gene91808	PPI
MS.gene055359	MS.gene91808	PPI
MS.gene055357	MS.gene91808	PPI
MS.gene022561	MS.gene91808	PPI
MS.gene019468	MS.gene91808	PPI
MS.gene91806	MS.gene91808	PPI
MS.gene061334	MS.gene91808	PPI
MS.gene38854	MS.gene91808	PPI
MS.gene061335	MS.gene91808	PPI
MS.gene91807	MS.gene91808	PPI
MS.gene91809	MS.gene91808	PPI
MS.gene061337	MS.gene91808	PPI
MS.gene055354	MS.gene91808	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91808.t1	MTR_8g005285	85.000	500	54	4	1	481	1	498	0.0	854
MS.gene91808.t1	MTR_8g005295	81.907	514	58	4	1	481	1	512	0.0	835
MS.gene91808.t1	MTR_8g005325	51.163	473	187	11	17	481	38	474	1.58e-154	448
MS.gene91808.t1	MTR_8g005235	50.939	479	192	10	10	481	2	444	3.24e-154	446
MS.gene91808.t1	MTR_8g005265	45.572	463	202	12	34	480	27	455	4.37e-128	380
MS.gene91808.t1	MTR_0209s0060	46.795	468	186	12	17	474	11	425	1.28e-126	375
MS.gene91808.t1	MTR_0209s0030	46.795	468	186	12	17	474	11	425	1.28e-126	375
MS.gene91808.t1	MTR_8g005225	44.444	495	222	12	1	479	1	458	8.84e-126	374
MS.gene91808.t1	MTR_8g006525	47.323	467	194	11	13	474	7	426	3.14e-125	372
MS.gene91808.t1	MTR_4g112660	35.421	463	167	14	34	476	6	356	6.41e-73	235
MS.gene91808.t1	MTR_3g079390	33.038	451	244	14	31	469	37	441	3.97e-61	207
MS.gene91808.t1	MTR_6g010920	31.567	453	234	13	30	474	21	405	2.20e-58	198
MS.gene91808.t1	MTR_6g009590	30.958	449	234	9	24	463	15	396	2.24e-58	198
MS.gene91808.t1	MTR_6g011050	31.350	437	227	11	34	463	24	394	7.16e-57	194
MS.gene91808.t1	MTR_6g009610	30.872	447	231	12	27	463	18	396	2.83e-55	190
MS.gene91808.t1	MTR_0024s0080	31.808	437	217	11	36	463	27	391	4.81e-55	189
MS.gene91808.t1	MTR_3g107590	32.957	443	224	12	32	462	24	405	2.41e-54	188
MS.gene91808.t1	MTR_6g011060	30.369	461	235	12	27	469	18	410	1.52e-53	186
MS.gene91808.t1	MTR_6g010890	31.092	476	237	15	17	469	10	417	5.84e-53	184
MS.gene91808.t1	MTR_6g010810	30.886	463	238	12	24	474	12	404	3.17e-52	182
MS.gene91808.t1	MTR_6g009170	30.989	455	234	13	24	462	15	405	4.70e-51	179
MS.gene91808.t1	MTR_2g041180	26.802	444	267	13	34	471	50	441	4.33e-41	154
MS.gene91808.t1	MTR_2g036320	26.754	456	264	14	27	471	61	457	9.94e-41	153
MS.gene91808.t1	MTR_2g035640	29.730	407	211	11	71	469	1	340	5.88e-40	147
MS.gene91808.t1	MTR_5g086340	27.964	447	248	13	35	466	33	420	1.63e-36	140
MS.gene91808.t1	MTR_6g010850	29.947	374	185	12	107	469	33	340	2.10e-33	130
MS.gene91808.t1	MTR_5g016570	28.381	451	253	12	30	454	97	503	3.00e-33	132
MS.gene91808.t1	MTR_7g011980	35.602	191	99	4	281	469	165	333	6.47e-28	114
MS.gene91808.t1	MTR_7g011980	31.361	169	77	5	15	183	8	137	7.68e-15	76.3
MS.gene91808.t1	MTR_7g059540	24.204	471	279	14	36	469	29	458	8.27e-26	110
MS.gene91808.t1	MTR_7g059540	23.493	481	280	13	36	469	28	467	6.45e-24	104
MS.gene91808.t1	MTR_5g086230	37.278	169	95	5	35	198	29	191	3.64e-23	97.4
MS.gene91808.t1	MTR_6g009580	31.604	212	115	4	259	462	30	219	1.40e-22	96.7
MS.gene91808.t1	MTR_7g060260	24.057	424	251	9	44	454	38	403	1.55e-21	97.1
MS.gene91808.t1	MTR_8g042830	22.078	462	237	14	35	470	42	406	2.71e-21	96.3
MS.gene91808.t1	MTR_7g060310	22.521	484	274	12	44	469	39	479	5.54e-21	95.9
MS.gene91808.t1	MTR_7g060220	23.326	433	272	10	36	454	27	413	4.01e-19	90.1
MS.gene91808.t1	MTR_7g060320	22.876	459	269	12	36	454	28	441	5.43e-19	89.7
MS.gene91808.t1	MTR_7g060115	22.926	458	272	14	48	471	41	451	6.22e-18	86.7
MS.gene91808.t1	MTR_7g060020	23.482	494	285	16	7	471	2	431	1.79e-17	85.1
MS.gene91808.t1	MTR_6g009600	32.414	145	74	2	284	427	23	144	2.38e-17	79.3
MS.gene91808.t1	MTR_7g059520	30.994	171	98	3	284	453	5	156	4.40e-17	79.3
MS.gene91808.t1	MTR_7g059525	29.412	187	112	2	284	469	108	275	4.43e-17	82.0
MS.gene91808.t1	MTR_7g059480	28.358	201	121	3	273	469	584	765	7.34e-17	84.0
MS.gene91808.t1	MTR_1g040690	25.476	420	248	14	34	433	27	401	1.33e-16	82.4
MS.gene91808.t1	MTR_5g086260	28.571	196	113	5	273	466	126	296	3.06e-16	80.1
MS.gene91808.t1	MTR_7g060840	23.297	455	264	13	44	480	38	425	4.16e-15	77.8
MS.gene91808.t1	MTR_5g087580	25.397	189	117	2	282	469	41	206	8.03e-15	73.9
MS.gene91808.t1	MTR_7g060080	31.081	148	97	2	329	471	42	189	1.11e-14	73.2
MS.gene91808.t1	MTR_7g067940	30.000	200	126	4	35	233	30	216	1.95e-14	75.9
MS.gene91808.t1	MTR_3g466740	25.128	390	217	14	35	396	31	373	2.87e-14	75.1
MS.gene91808.t1	MTR_0067s0010	24.935	385	217	14	35	396	44	379	5.59e-14	74.3
MS.gene91808.t1	MTR_7g059510	23.724	333	186	10	168	475	123	412	8.03e-14	73.6
MS.gene91808.t1	MTR_0182s0060	35.507	138	87	2	333	469	372	508	8.98e-14	73.9
MS.gene91808.t1	MTR_7g059810	23.788	433	259	10	44	454	38	421	1.63e-13	72.8
MS.gene91808.t1	MTR_7g446270	22.944	462	282	13	36	454	31	461	1.70e-13	72.8
MS.gene91808.t1	MTR_7g060160	24.834	451	250	19	36	471	27	403	3.44e-13	71.6
MS.gene91808.t1	MTR_7g067300	22.811	491	300	20	26	471	14	470	2.84e-12	68.9
MS.gene91808.t1	MTR_4g009620	33.974	156	93	4	34	184	42	192	6.72e-12	68.2
MS.gene91808.t1	MTR_4g009590	29.104	134	94	1	339	471	411	544	2.02e-11	66.6
MS.gene91808.t1	MTR_7g068070	29.091	165	114	3	31	194	26	188	3.79e-11	65.9
MS.gene91808.t1	MTR_1g038270	28.649	185	117	6	17	192	7	185	8.79e-11	64.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91808.t1	AT2G44930	30.998	471	223	12	34	469	84	487	3.99e-55	192
MS.gene91808.t1	AT2G28580	30.719	459	235	11	34	469	41	439	1.56e-54	189
MS.gene91808.t1	AT2G28580	31.087	460	232	12	34	469	109	507	4.84e-54	190
MS.gene91808.t1	AT2G28580	31.087	460	232	12	34	469	123	521	7.68e-54	189
MS.gene91808.t1	AT2G28580	30.958	449	230	11	34	469	109	490	8.92e-53	186
MS.gene91808.t1	AT2G28580	31.707	451	224	12	34	469	123	504	1.20e-52	186
MS.gene91808.t1	AT4G31980	29.263	434	238	11	34	462	293	662	6.43e-49	178
MS.gene91808.t1	AT5G11290	27.948	458	247	14	26	469	23	411	1.91e-44	161
MS.gene91808.t1	AT1G67150	27.692	455	246	11	33	469	5	394	5.93e-41	152
MS.gene91808.t1	AT1G67150	27.692	455	246	11	33	469	5	394	5.93e-41	152
MS.gene91808.t1	AT1G67150	27.451	459	246	11	33	469	5	398	2.19e-40	150
MS.gene91808.t1	AT2G36430	27.483	433	244	15	34	454	45	419	2.22e-39	148
MS.gene91808.t1	AT3G50150	28.571	448	264	11	36	471	92	495	3.54e-39	149
MS.gene91808.t1	AT3G50160	27.376	442	263	8	30	469	100	485	9.71e-39	147
MS.gene91808.t1	AT3G50170	27.233	459	259	11	36	469	115	523	1.08e-36	142
MS.gene91808.t1	AT1G65985	28.942	463	232	13	36	454	16	425	1.29e-36	140
MS.gene91808.t1	AT1G65985	28.942	463	232	13	36	454	16	425	1.29e-36	140
MS.gene91808.t1	AT2G28580	29.771	393	193	11	34	403	123	455	3.92e-36	139
MS.gene91808.t1	AT3G47250	26.754	456	280	13	25	469	52	464	2.90e-35	137
MS.gene91808.t1	AT3G47250	26.754	456	280	13	25	469	52	464	2.90e-35	137
MS.gene91808.t1	AT3G47250	26.754	456	280	13	25	469	52	464	2.90e-35	137
MS.gene91808.t1	AT3G50140	26.316	456	271	10	36	471	115	525	9.40e-34	134
MS.gene91808.t1	AT3G47210	28.846	416	205	12	25	419	84	429	2.21e-33	132
MS.gene91808.t1	AT3G50120	26.889	450	274	11	36	469	105	515	2.97e-33	132
MS.gene91808.t1	AT3G50180	26.981	467	246	12	30	469	174	572	8.49e-33	132
MS.gene91808.t1	AT3G47200	26.087	437	275	12	25	454	37	432	1.06e-29	121
MS.gene91808.t1	AT3G47200	26.087	437	275	12	25	454	37	432	1.06e-29	121
MS.gene91808.t1	AT5G22540	26.410	390	233	11	34	419	31	370	3.19e-29	119
MS.gene91808.t1	AT3G50130	27.107	439	254	13	36	454	141	533	9.65e-29	119
MS.gene91808.t1	AT3G50190	26.562	384	223	8	36	419	98	422	3.54e-26	111
MS.gene91808.t1	AT5G11290	25.061	411	227	13	71	469	1	342	7.73e-26	108
MS.gene91808.t1	AT5G22550	24.470	519	296	19	2	471	5	476	6.16e-25	107
MS.gene91808.t1	AT3G44710	23.542	480	285	16	34	469	47	488	3.78e-24	105
MS.gene91808.t1	AT3G60470	35.602	191	97	4	286	474	365	531	4.03e-24	105
MS.gene91808.t1	AT3G60470	39.106	179	85	5	36	193	34	209	4.75e-23	102
MS.gene91808.t1	AT1G67150	24.494	445	230	13	33	469	5	351	4.89e-24	103
MS.gene91808.t1	AT3G50150	26.496	351	211	11	36	364	92	417	3.13e-18	87.4
MS.gene91808.t1	AT3G50170	32.886	149	94	2	36	184	115	257	6.23e-18	86.3
MS.gene91808.t1	AT5G22560	26.599	297	160	11	3	278	10	269	1.41e-17	85.9
MS.gene91808.t1	AT3G50140	30.519	154	101	2	36	189	115	262	4.76e-14	74.3
MS.gene91808.t1	AT3G02645	33.051	118	78	1	339	455	380	497	1.51e-12	70.1
MS.gene91808.t1	AT3G50190	27.647	170	114	3	36	205	98	258	1.52e-12	69.3
MS.gene91808.t1	AT3G50190	27.647	170	114	3	36	205	98	258	1.52e-12	69.3
MS.gene91808.t1	AT3G50190	27.647	170	114	3	36	205	98	258	1.52e-12	69.3

Find 66 sgRNAs with CRISPR-Local

Find 84 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAATATCTCTTTGTCGATTT+TGG	0.072793	8.3:-81536933	None:intergenic
ATAACCATTATCAGAATATT+TGG	0.141712	8.3:+81537872	MS.gene91808:CDS
CTTGATACTGACATTGTTCT+AGG	0.157660	8.3:-81537651	None:intergenic
ATTAACTTTGTTACTGTTCT+TGG	0.162375	8.3:-81537427	None:intergenic
AAGAACAGTAACAAAGTTAA+TGG	0.202748	8.3:+81537429	MS.gene91808:CDS
TTATACCTTCCACCTGATTT+AGG	0.212491	8.3:+81537379	MS.gene91808:CDS
GAAACATAATTGCATATATA+AGG	0.271861	8.3:-81537679	None:intergenic
ACCATTTCAAAGCGCGTCTA+AGG	0.318480	8.3:+81537572	MS.gene91808:CDS
AGATCCATCAATACAGAAAA+AGG	0.321449	8.3:-81537118	None:intergenic
GTAACAAAGTTAATGGATTC+TGG	0.333596	8.3:+81537436	MS.gene91808:CDS
CATGATCATTGATTGTTGAT+TGG	0.336296	8.3:-81536846	None:intergenic
ATCAAATCAGTGAAATGTTT+AGG	0.346459	8.3:-81537349	None:intergenic
GGTTCCAAATATTCTGATAA+TGG	0.351805	8.3:-81537876	None:intergenic
GAGAAACAGTTCATTGAAAT+CGG	0.364761	8.3:+81537003	MS.gene91808:CDS
TCTCTATTAGAAAAGAATCT+TGG	0.372651	8.3:-81538010	None:intergenic
CGCCGTTAGGGACGACGGTT+TGG	0.383020	8.3:-81537144	None:intergenic
GAGCTAGTTCTACTTTGGTT+GGG	0.384217	8.3:+81537944	MS.gene91808:CDS
AACATTTCACTGATTTGATA+AGG	0.390830	8.3:+81537353	MS.gene91808:CDS
ACTCCTCAATTAATCTCAAT+TGG	0.392658	8.3:+81536734	MS.gene91808:CDS
ATAGACGCTCATAGAAGAAA+TGG	0.394603	8.3:-81536817	None:intergenic
GAAGTGGCAGTGCTTGTTAA+TGG	0.401978	8.3:+81537790	MS.gene91808:CDS
AGAGCTAGTTCTACTTTGGT+TGG	0.408855	8.3:+81537943	MS.gene91808:CDS
CCATCACTCTTTCCTAAATC+AGG	0.411801	8.3:-81537391	None:intergenic
TCCTTAGACGCGCTTTGAAA+TGG	0.415205	8.3:-81537573	None:intergenic
GTTTAGGAACTTGAATCCTA+TGG	0.427046	8.3:-81537333	None:intergenic
AATCAACATCAACTTGTGTA+TGG	0.449318	8.3:-81537720	None:intergenic
ACAAGTTGATGTTGATTTGT+TGG	0.455972	8.3:+81537726	MS.gene91808:CDS
GGAAGTGATTGTGCATGAAA+TGG	0.461128	8.3:+81537756	MS.gene91808:CDS
TAAGCTTATTAATAGTATCA+TGG	0.461800	8.3:-81537849	None:intergenic
GGACCAATTGAGATTAATTG+AGG	0.464532	8.3:-81536737	None:intergenic
TTGGAGAGCTAGTTCTACTT+TGG	0.466290	8.3:+81537939	MS.gene91808:CDS
CATCACCAAGCTTAGTTTCA+CGG	0.472507	8.3:-81537246	None:intergenic
ATCACCAAGCTTAGTTTCAC+GGG	0.494771	8.3:-81537245	None:intergenic
TCTAAGGATTCCGCAGTTGA+AGG	0.499213	8.3:+81537588	MS.gene91808:CDS
AGCAGATTGTAGCATCTACA+AGG	0.504878	8.3:+81536673	MS.gene91808:CDS
ATTACATTCTAACACAAGCT+TGG	0.511928	8.3:+81537047	MS.gene91808:CDS
TGTTGATTTGTTGGTGGAGA+AGG	0.512953	8.3:+81537735	MS.gene91808:CDS
GAAGTGATTGTGCATGAAAT+GGG	0.523677	8.3:+81537757	MS.gene91808:CDS
GGTGATGTTGCCGTTGGTAG+CGG	0.530910	8.3:+81537262	MS.gene91808:CDS
TTTGTCGCCGTTAGGGACGA+CGG	0.536027	8.3:-81537149	None:intergenic
GGCTCAGCAAAAGCATCGCA+AGG	0.540954	8.3:+81537068	MS.gene91808:CDS
TTGATACTGACATTGTTCTA+GGG	0.541956	8.3:-81537650	None:intergenic
TGGTTCAAACATGAAAATGA+AGG	0.548134	8.3:-81537553	None:intergenic
TCAATTGGTCCAATTCACCT+TGG	0.558480	8.3:+81536749	MS.gene91808:CDS
ATGAGCTTCAGACTCTATCT+CGG	0.572339	8.3:+81536866	MS.gene91808:CDS
AGTTGATGTTGATTTGTTGG+TGG	0.572996	8.3:+81537729	MS.gene91808:CDS
CACCAACCACAATGTAGTCA+TGG	0.576927	8.3:-81537902	None:intergenic
TACCAAACCGTCGTCCCTAA+CGG	0.578089	8.3:+81537142	MS.gene91808:CDS
AACTGAATTACCGCTACCAA+CGG	0.579233	8.3:-81537272	None:intergenic
TGGTCTTTGTAAACATGTTG+TGG	0.582048	8.3:+81537810	MS.gene91808:CDS
TCATCCCGTGAAACTAAGCT+TGG	0.589128	8.3:+81537241	MS.gene91808:CDS
GACATTGTTCTAGGGCAATG+AGG	0.593451	8.3:-81537642	None:intergenic
AATCTATGAGCAGTAACCAT+AGG	0.602676	8.3:+81537317	MS.gene91808:CDS
ACCACAATGTAGTCATGGTA+CGG	0.603090	8.3:-81537897	None:intergenic
CAAGATCAAGAAAACTTGCA+TGG	0.608575	8.3:-81537180	None:intergenic
TCTTTCCTAAATCAGGTGGA+AGG	0.615782	8.3:-81537384	None:intergenic
AATAAGAAAATGTTATGCAG+AGG	0.616750	8.3:+81536904	MS.gene91808:CDS
AAGCTTGGTGATGTTGCCGT+TGG	0.620314	8.3:+81537256	MS.gene91808:CDS
TCACTCTTTCCTAAATCAGG+TGG	0.629605	8.3:-81537388	None:intergenic
CCTGATTTAGGAAAGAGTGA+TGG	0.634152	8.3:+81537391	MS.gene91808:CDS
TACCATGACTACATTGTGGT+TGG	0.634943	8.3:+81537900	MS.gene91808:CDS
TGCTTTATCTGAATATGATG+TGG	0.636582	8.3:+81536607	MS.gene91808:CDS
AATGGGAAGTGATAAAGAAG+TGG	0.638138	8.3:+81537774	MS.gene91808:CDS
GCTCAGCAAAAGCATCGCAA+GGG	0.656302	8.3:+81537069	MS.gene91808:CDS
GTGTGATCAACCTTCAACTG+CGG	0.710202	8.3:-81537598	None:intergenic
ACCGTACCATGACTACATTG+TGG	0.800293	8.3:+81537896	MS.gene91808:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAACCATTATCAGAATATT+TGG	+	chr8.3:81537872-81537891	MS.gene91808:CDS	20.0%
!!	GAAACATAATTGCATATATA+AGG	-	chr8.3:81537682-81537701	None:intergenic	20.0%
!!	TAAGCTTATTAATAGTATCA+TGG	-	chr8.3:81537852-81537871	None:intergenic	20.0%
!!!	TTTATCAGAATGTTTTTTCT+TGG	-	chr8.3:81537299-81537318	None:intergenic	20.0%
!	AAGAACAGTAACAAAGTTAA+TGG	+	chr8.3:81537429-81537448	MS.gene91808:CDS	25.0%
!	AATAAGAAAATGTTATGCAG+AGG	+	chr8.3:81536904-81536923	MS.gene91808:CDS	25.0%
!	ATCAAATCAGTGAAATGTTT+AGG	-	chr8.3:81537352-81537371	None:intergenic	25.0%
!	ATTAACTTTGTTACTGTTCT+TGG	-	chr8.3:81537430-81537449	None:intergenic	25.0%
!!!	AACATTTCACTGATTTGATA+AGG	+	chr8.3:81537353-81537372	MS.gene91808:CDS	25.0%
!!!	AATATCTCTTTGTCGATTTT+GGG	-	chr8.3:81536935-81536954	None:intergenic	25.0%
	AATCAACATCAACTTGTGTA+TGG	-	chr8.3:81537723-81537742	None:intergenic	30.0%
	ACTCCTCAATTAATCTCAAT+TGG	+	chr8.3:81536734-81536753	MS.gene91808:CDS	30.0%
	AGATCCATCAATACAGAAAA+AGG	-	chr8.3:81537121-81537140	None:intergenic	30.0%
	ATTACATTCTAACACAAGCT+TGG	+	chr8.3:81537047-81537066	MS.gene91808:CDS	30.0%
	CAATGCAACAACACAAAAAA+AGG	+	chr8.3:81536789-81536808	MS.gene91808:CDS	30.0%
	GAGAAACAGTTCATTGAAAT+CGG	+	chr8.3:81537003-81537022	MS.gene91808:CDS	30.0%
	GGTTCCAAATATTCTGATAA+TGG	-	chr8.3:81537879-81537898	None:intergenic	30.0%
	TGCTTTATCTGAATATGATG+TGG	+	chr8.3:81536607-81536626	MS.gene91808:CDS	30.0%
	TGGTTCAAACATGAAAATGA+AGG	-	chr8.3:81537556-81537575	None:intergenic	30.0%
	TTGATACTGACATTGTTCTA+GGG	-	chr8.3:81537653-81537672	None:intergenic	30.0%
!	ACACAACAGAATGTGTTTTA+AGG	+	chr8.3:81537617-81537636	MS.gene91808:CDS	30.0%
!	CATGATCATTGATTGTTGAT+TGG	-	chr8.3:81536849-81536868	None:intergenic	30.0%
!	GATACCTTTTTCTGTATTGA+TGG	+	chr8.3:81537114-81537133	MS.gene91808:CDS	30.0%
!!	AAGCTTCTTGTTTCACTTTT+CGG	-	chr8.3:81536712-81536731	None:intergenic	30.0%
!!	ACAAGTTGATGTTGATTTGT+TGG	+	chr8.3:81537726-81537745	MS.gene91808:CDS	30.0%
!!	CTAAGTTATTTTCTCTGCTT+AGG	+	chr8.3:81537523-81537542	MS.gene91808:CDS	30.0%
!!	GTAACAAAGTTAATGGATTC+TGG	+	chr8.3:81537436-81537455	MS.gene91808:CDS	30.0%
!!!	CTTTTTTTGTGTTGTTGCAT+TGG	-	chr8.3:81536791-81536810	None:intergenic	30.0%
!!!	GAATATCTCTTTGTCGATTT+TGG	-	chr8.3:81536936-81536955	None:intergenic	30.0%
!!!	GTGAGTTTTGAGAAAATTGT+GGG	+	chr8.3:81537460-81537479	MS.gene91808:CDS	30.0%
!!!	TGAGTTTTGAGAAAATTGTG+GGG	+	chr8.3:81537461-81537480	MS.gene91808:CDS	30.0%
!!!	TGTGAGTTTTGAGAAAATTG+TGG	+	chr8.3:81537459-81537478	MS.gene91808:CDS	30.0%
	AATCTATGAGCAGTAACCAT+AGG	+	chr8.3:81537317-81537336	MS.gene91808:CDS	35.0%
	AATGGGAAGTGATAAAGAAG+TGG	+	chr8.3:81537774-81537793	MS.gene91808:CDS	35.0%
	ATAGACGCTCATAGAAGAAA+TGG	-	chr8.3:81536820-81536839	None:intergenic	35.0%
	CAAGATCAAGAAAACTTGCA+TGG	-	chr8.3:81537183-81537202	None:intergenic	35.0%
	CTTGATACTGACATTGTTCT+AGG	-	chr8.3:81537654-81537673	None:intergenic	35.0%
	GAAGTGATTGTGCATGAAAT+GGG	+	chr8.3:81537757-81537776	MS.gene91808:CDS	35.0%
	GGACCAATTGAGATTAATTG+AGG	-	chr8.3:81536740-81536759	None:intergenic	35.0%
	GTTTAGGAACTTGAATCCTA+TGG	-	chr8.3:81537336-81537355	None:intergenic	35.0%
	TGGTCTTTGTAAACATGTTG+TGG	+	chr8.3:81537810-81537829	MS.gene91808:CDS	35.0%
	TTATACCTTCCACCTGATTT+AGG	+	chr8.3:81537379-81537398	MS.gene91808:CDS	35.0%
!	GTTGAAGTTCTTCTTTTCCA+AGG	-	chr8.3:81536769-81536788	None:intergenic	35.0%
!	TCTTCTTTTCCAAGGTGAAT+TGG	-	chr8.3:81536761-81536780	None:intergenic	35.0%
!!	AGTTGATGTTGATTTGTTGG+TGG	+	chr8.3:81537729-81537748	MS.gene91808:CDS	35.0%
!!	TGGTGTATTTTAGAGATGCT+TGG	+	chr8.3:81537920-81537939	MS.gene91808:CDS	35.0%
!!!	GTTTGATGCTGTTTTCATCA+TGG	+	chr8.3:81536970-81536989	MS.gene91808:CDS	35.0%
	AACTGAATTACCGCTACCAA+CGG	-	chr8.3:81537275-81537294	None:intergenic	40.0%
	ACCACAATGTAGTCATGGTA+CGG	-	chr8.3:81537900-81537919	None:intergenic	40.0%
	AGCAGATTGTAGCATCTACA+AGG	+	chr8.3:81536673-81536692	MS.gene91808:CDS	40.0%
	ATCACCAAGCTTAGTTTCAC+GGG	-	chr8.3:81537248-81537267	None:intergenic	40.0%
	ATGAGCTTCAGACTCTATCT+CGG	+	chr8.3:81536866-81536885	MS.gene91808:CDS	40.0%
	CATCACCAAGCTTAGTTTCA+CGG	-	chr8.3:81537249-81537268	None:intergenic	40.0%
	CCATCACTCTTTCCTAAATC+AGG	-	chr8.3:81537394-81537413	None:intergenic	40.0%
	CCTGATTTAGGAAAGAGTGA+TGG	+	chr8.3:81537391-81537410	MS.gene91808:CDS	40.0%
	GGAAGTGATTGTGCATGAAA+TGG	+	chr8.3:81537756-81537775	MS.gene91808:CDS	40.0%
	TACCATGACTACATTGTGGT+TGG	+	chr8.3:81537900-81537919	MS.gene91808:CDS	40.0%
	TCAATTGGTCCAATTCACCT+TGG	+	chr8.3:81536749-81536768	MS.gene91808:CDS	40.0%
	TCACTCTTTCCTAAATCAGG+TGG	-	chr8.3:81537391-81537410	None:intergenic	40.0%
	TCTTTCCTAAATCAGGTGGA+AGG	-	chr8.3:81537387-81537406	None:intergenic	40.0%
!!	AGAGCTAGTTCTACTTTGGT+TGG	+	chr8.3:81537943-81537962	MS.gene91808:CDS	40.0%
!!	GAGCTAGTTCTACTTTGGTT+GGG	+	chr8.3:81537944-81537963	MS.gene91808:CDS	40.0%
!!	TGTTGATTTGTTGGTGGAGA+AGG	+	chr8.3:81537735-81537754	MS.gene91808:CDS	40.0%
!!	TTCACTTTTCGGAGATTGTG+AGG	-	chr8.3:81536701-81536720	None:intergenic	40.0%
!!	TTGGAGAGCTAGTTCTACTT+TGG	+	chr8.3:81537939-81537958	MS.gene91808:CDS	40.0%
!!!	CTTCTTTTTTGTCGCCGTTA+GGG	-	chr8.3:81537159-81537178	None:intergenic	40.0%
!!!	TCTTCTTTTTTGTCGCCGTT+AGG	-	chr8.3:81537160-81537179	None:intergenic	40.0%
	ACCATTTCAAAGCGCGTCTA+AGG	+	chr8.3:81537572-81537591	MS.gene91808:CDS	45.0%
	ACCGTACCATGACTACATTG+TGG	+	chr8.3:81537896-81537915	MS.gene91808:CDS	45.0%
	CACCAACCACAATGTAGTCA+TGG	-	chr8.3:81537905-81537924	None:intergenic	45.0%
	GTGTGATCAACCTTCAACTG+CGG	-	chr8.3:81537601-81537620	None:intergenic	45.0%
	TCATCCCGTGAAACTAAGCT+TGG	+	chr8.3:81537241-81537260	MS.gene91808:CDS	45.0%
	TCTAAGGATTCCGCAGTTGA+AGG	+	chr8.3:81537588-81537607	MS.gene91808:CDS	45.0%
!	CGCAAGGGACTTGATTTTGT+TGG	+	chr8.3:81537084-81537103	MS.gene91808:CDS	45.0%
!	GAAGTGGCAGTGCTTGTTAA+TGG	+	chr8.3:81537790-81537809	MS.gene91808:CDS	45.0%
!!	GACATTGTTCTAGGGCAATG+AGG	-	chr8.3:81537645-81537664	None:intergenic	45.0%
!!	TCCTTAGACGCGCTTTGAAA+TGG	-	chr8.3:81537576-81537595	None:intergenic	45.0%
	TACCAAACCGTCGTCCCTAA+CGG	+	chr8.3:81537142-81537161	MS.gene91808:CDS	50.0%
!!	AAGCTTGGTGATGTTGCCGT+TGG	+	chr8.3:81537256-81537275	MS.gene91808:CDS	50.0%
!!	GCTCAGCAAAAGCATCGCAA+GGG	+	chr8.3:81537069-81537088	MS.gene91808:CDS	50.0%
	TTTGTCGCCGTTAGGGACGA+CGG	-	chr8.3:81537152-81537171	None:intergenic	55.0%
!	GGTGATGTTGCCGTTGGTAG+CGG	+	chr8.3:81537262-81537281	MS.gene91808:CDS	55.0%
!!	GGCTCAGCAAAAGCATCGCA+AGG	+	chr8.3:81537068-81537087	MS.gene91808:CDS	55.0%
	CGCCGTTAGGGACGACGGTT+TGG	-	chr8.3:81537147-81537166	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.3	gene	81536581	81538026	81536581	ID=MS.gene91808
chr8.3	mRNA	81536581	81538026	81536581	ID=MS.gene91808.t1;Parent=MS.gene91808
chr8.3	exon	81536581	81538026	81536581	ID=MS.gene91808.t1.exon1;Parent=MS.gene91808.t1
chr8.3	CDS	81536581	81538026	81536581	ID=cds.MS.gene91808.t1;Parent=MS.gene91808.t1

Gene Sequence

>MS.gene91808

ATGGCACATGCTAATGCTTCTGCTGCTGCTTTATCTGAATATGATGTGGTGAAACACATCATTGACACTGATGTTCTAGAAGAGTTAAGTTTAGCAGATTGTAGCATCTACAAGGTTCCTCACAATCTCCGAAAAGTGAAACAAGAAGCTTACACTCCTCAATTAATCTCAATTGGTCCAATTCACCTTGGAAAAGAAGAACTTCAACCAATGCAACAACACAAAAAAAGGTATTTCCATTTCTTCTATGAGCGTCTATCTAAATCCAATCAACAATCAATGATCATGAGCTTCAGACTCTATCTCGGAAACAAAGAACAAGAAATAAGAAAATGTTATGCAGAGGATTTTCCCAAAATCGACAAAGAGATATTCGTCGAAACAATTTTGTTTGATGCTGTTTTCATCATGGAACTTTTGTTGAGAAACAGTTCATTGAAATCGGATACATCAAAAGATGAACATGATTACATTCTAACACAAGCTTGGCTCAGCAAAAGCATCGCAAGGGACTTGATTTTGTTGGAAAATCAGATACCTTTTTCTGTATTGATGGATCTTTACCAAACCGTCGTCCCTAACGGCGACAAAAAAGAAGACCATGCAAGTTTTCTTGATCTTGCACTTGAGTACTTTGCATTCTATGACACTCAGAAATCGTCATCCCGTGAAACTAAGCTTGGTGATGTTGCCGTTGGTAGCGGTAATTCAGTTTCCAAGAAAAAACATTCTGATAAATCTATGAGCAGTAACCATAGGATTCAAGTTCCTAAACATTTCACTGATTTGATAAGGTTTTTATACCTTCCACCTGATTTAGGAAAGAGTGATGGTTCTCATATTTTTCCAAGAACAGTAACAAAGTTAATGGATTCTGGTGTGAGTTTTGAGAAAATTGTGGGGAGAAGATTACTAGACATAAACTTTGAGAAGAAAAAGTTTCTAAGTTATTTTCTCTGCTTAGGTTGTTTACCTTCATTTTCATGTTTGAACCATTTCAAAGCGCGTCTAAGGATTCCGCAGTTGAAGGTTGATCACACAACAGAATGTGTTTTAAGGAACCTCATTGCCCTAGAACAATGTCAGTATCAAGAGAAACCTTATATATGCAATTATGTTTCACTTGTTGATTCTCTTATCCATACACAAGTTGATGTTGATTTGTTGGTGGAGAAGGAAGTGATTGTGCATGAAATGGGAAGTGATAAAGAAGTGGCAGTGCTTGTTAATGGTCTTTGTAAACATGTTGTGGTGAATTCAACTTGTTACCATGATACTATTAATAAGCTTAATAACCATTATCAGAATATTTGGAACCGTACCATGACTACATTGTGGTTGGTGTATTTTAGAGATGCTTGGAGAGCTAGTTCTACTTTGGTTGGGATTGCTTTTCTTGTTTACACAGCATTCGACTTTGTACGTCTTGCCAAGATTCTTTTCTAA

Protein sequence

>MS.gene91808.t1

MAHANASAAALSEYDVVKHIIDTDVLEELSLADCSIYKVPHNLRKVKQEAYTPQLISIGPIHLGKEELQPMQQHKKRYFHFFYERLSKSNQQSMIMSFRLYLGNKEQEIRKCYAEDFPKIDKEIFVETILFDAVFIMELLLRNSSLKSDTSKDEHDYILTQAWLSKSIARDLILLENQIPFSVLMDLYQTVVPNGDKKEDHASFLDLALEYFAFYDTQKSSSRETKLGDVAVGSGNSVSKKKHSDKSMSSNHRIQVPKHFTDLIRFLYLPPDLGKSDGSHIFPRTVTKLMDSGVSFEKIVGRRLLDINFEKKKFLSYFLCLGCLPSFSCLNHFKARLRIPQLKVDHTTECVLRNLIALEQCQYQEKPYICNYVSLVDSLIHTQVDVDLLVEKEVIVHEMGSDKEVAVLVNGLCKHVVVNSTCYHDTINKLNNHYQNIWNRTMTTLWLVYFRDAWRASSTLVGIAFLVYTAFDFVRLAKILF