Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91807.t1 | XP_013443758.1 | 92.8 | 515 | 34 | 1 | 1 | 515 | 1 | 512 | 1.90E-272 | 948 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91807.t1 | Q9SD53 | 24.4 | 483 | 291 | 10 | 25 | 503 | 35 | 447 | 2.1e-22 | 108.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91807.t1 | A0A072TLQ6 | 92.8 | 515 | 34 | 1 | 1 | 515 | 1 | 512 | 1.4e-272 | 948.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049150 | MS.gene91807 | 0.813931 | 1.99E-51 | -1.69E-46 |
MS.gene049233 | MS.gene91807 | 0.802076 | 6.66E-49 | -1.69E-46 |
MS.gene049260 | MS.gene91807 | 0.822836 | 1.91E-53 | -1.69E-46 |
MS.gene04933 | MS.gene91807 | 0.806192 | 9.27E-50 | -1.69E-46 |
MS.gene050020 | MS.gene91807 | 0.810099 | 1.36E-50 | -1.69E-46 |
MS.gene050137 | MS.gene91807 | 0.803652 | 3.15E-49 | -1.69E-46 |
MS.gene050226 | MS.gene91807 | 0.802569 | 5.27E-49 | -1.69E-46 |
MS.gene050227 | MS.gene91807 | 0.812278 | 4.59E-51 | -1.69E-46 |
MS.gene050228 | MS.gene91807 | 0.804707 | 1.90E-49 | -1.69E-46 |
MS.gene050442 | MS.gene91807 | 0.828254 | 9.96E-55 | -1.69E-46 |
MS.gene050478 | MS.gene91807 | 0.819435 | 1.16E-52 | -1.69E-46 |
MS.gene050546 | MS.gene91807 | 0.814275 | 1.67E-51 | -1.69E-46 |
MS.gene050558 | MS.gene91807 | 0.822709 | 2.05E-53 | -1.69E-46 |
MS.gene050560 | MS.gene91807 | 0.805487 | 1.30E-49 | -1.69E-46 |
MS.gene050680 | MS.gene91807 | 0.832571 | 8.76E-56 | -1.69E-46 |
MS.gene050787 | MS.gene91807 | 0.875725 | 2.46E-68 | -1.69E-46 |
MS.gene050844 | MS.gene91807 | 0.803227 | 3.86E-49 | -1.69E-46 |
MS.gene050959 | MS.gene91807 | 0.804501 | 2.10E-49 | -1.69E-46 |
MS.gene051265 | MS.gene91807 | 0.85096 | 1.21E-60 | -1.69E-46 |
MS.gene051344 | MS.gene91807 | 0.803385 | 3.57E-49 | -1.69E-46 |
MS.gene051860 | MS.gene91807 | 0.829889 | 4.00E-55 | -1.69E-46 |
MS.gene052190 | MS.gene91807 | 0.842305 | 2.80E-58 | -1.69E-46 |
MS.gene052333 | MS.gene91807 | 0.814083 | 1.85E-51 | -1.69E-46 |
MS.gene052355 | MS.gene91807 | 0.805717 | 1.17E-49 | -1.69E-46 |
MS.gene052611 | MS.gene91807 | 0.820159 | 7.95E-53 | -1.69E-46 |
MS.gene052613 | MS.gene91807 | 0.80972 | 1.65E-50 | -1.69E-46 |
MS.gene053147 | MS.gene91807 | 0.807718 | 4.41E-50 | -1.69E-46 |
MS.gene053166 | MS.gene91807 | 0.818587 | 1.81E-52 | -1.69E-46 |
MS.gene053184 | MS.gene91807 | 0.827933 | 1.19E-54 | -1.69E-46 |
MS.gene053836 | MS.gene91807 | 0.807564 | 4.75E-50 | -1.69E-46 |
MS.gene054183 | MS.gene91807 | 0.833925 | 4.03E-56 | -1.69E-46 |
MS.gene054291 | MS.gene91807 | -0.81365 | 2.30E-51 | -1.69E-46 |
MS.gene054433 | MS.gene91807 | 0.851729 | 7.34E-61 | -1.69E-46 |
MS.gene054467 | MS.gene91807 | 0.851856 | 6.76E-61 | -1.69E-46 |
MS.gene054468 | MS.gene91807 | 0.84933 | 3.47E-60 | -1.69E-46 |
MS.gene054473 | MS.gene91807 | 0.837546 | 4.88E-57 | -1.69E-46 |
MS.gene054542 | MS.gene91807 | 0.806476 | 8.08E-50 | -1.69E-46 |
MS.gene054559 | MS.gene91807 | 0.828135 | 1.06E-54 | -1.69E-46 |
MS.gene054581 | MS.gene91807 | 0.802168 | 6.38E-49 | -1.69E-46 |
MS.gene055356 | MS.gene91807 | 0.92032 | 1.49E-87 | -1.69E-46 |
MS.gene055357 | MS.gene91807 | 0.871293 | 7.63E-67 | -1.69E-46 |
MS.gene055358 | MS.gene91807 | 0.979992 | 3.34E-149 | -1.69E-46 |
MS.gene055507 | MS.gene91807 | 0.816199 | 6.25E-52 | -1.69E-46 |
MS.gene055604 | MS.gene91807 | 0.809296 | 2.03E-50 | -1.69E-46 |
MS.gene055818 | MS.gene91807 | 0.80188 | 7.31E-49 | -1.69E-46 |
MS.gene05604 | MS.gene91807 | 0.815142 | 1.08E-51 | -1.69E-46 |
MS.gene057026 | MS.gene91807 | 0.803412 | 3.53E-49 | -1.69E-46 |
MS.gene057060 | MS.gene91807 | 0.809209 | 2.12E-50 | -1.69E-46 |
MS.gene057200 | MS.gene91807 | 0.818934 | 1.51E-52 | -1.69E-46 |
MS.gene057395 | MS.gene91807 | 0.810037 | 1.41E-50 | -1.69E-46 |
MS.gene057469 | MS.gene91807 | 0.844644 | 6.65E-59 | -1.69E-46 |
MS.gene057639 | MS.gene91807 | 0.801821 | 7.51E-49 | -1.69E-46 |
MS.gene058168 | MS.gene91807 | 0.804718 | 1.89E-49 | -1.69E-46 |
MS.gene058829 | MS.gene91807 | 0.802248 | 6.14E-49 | -1.69E-46 |
MS.gene058935 | MS.gene91807 | 0.806894 | 6.59E-50 | -1.69E-46 |
MS.gene059128 | MS.gene91807 | 0.825186 | 5.38E-54 | -1.69E-46 |
MS.gene059607 | MS.gene91807 | 0.829262 | 5.68E-55 | -1.69E-46 |
MS.gene059609 | MS.gene91807 | 0.816092 | 6.61E-52 | -1.69E-46 |
MS.gene059789 | MS.gene91807 | 0.81085 | 9.39E-51 | -1.69E-46 |
MS.gene059896 | MS.gene91807 | -0.807743 | 4.36E-50 | -1.69E-46 |
MS.gene060137 | MS.gene91807 | -0.826304 | 2.92E-54 | -1.69E-46 |
MS.gene060322 | MS.gene91807 | 0.851757 | 7.21E-61 | -1.69E-46 |
MS.gene060553 | MS.gene91807 | 0.814197 | 1.74E-51 | -1.69E-46 |
MS.gene060683 | MS.gene91807 | 0.804843 | 1.78E-49 | -1.69E-46 |
MS.gene060685 | MS.gene91807 | 0.806069 | 9.84E-50 | -1.69E-46 |
MS.gene060781 | MS.gene91807 | 0.81934 | 1.22E-52 | -1.69E-46 |
MS.gene060803 | MS.gene91807 | 0.82377 | 1.16E-53 | -1.69E-46 |
MS.gene061040 | MS.gene91807 | -0.823352 | 1.45E-53 | -1.69E-46 |
MS.gene061114 | MS.gene91807 | -0.864484 | 1.18E-64 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene91807 | MS.gene055354 | PPI |
MS.gene91807 | MS.gene91805 | PPI |
MS.gene91807 | MS.gene061337 | PPI |
MS.gene91807 | MS.gene061334 | PPI |
MS.gene91807 | MS.gene055358 | PPI |
MS.gene91807 | MS.gene055357 | PPI |
MS.gene91807 | MS.gene022560 | PPI |
MS.gene91807 | MS.gene91809 | PPI |
MS.gene91807 | MS.gene022561 | PPI |
MS.gene91807 | MS.gene061335 | PPI |
MS.gene91807 | MS.gene91806 | PPI |
MS.gene91807 | MS.gene055356 | PPI |
MS.gene91807 | MS.gene022559 | PPI |
MS.gene91807 | MS.gene061336 | PPI |
MS.gene91807 | MS.gene055359 | PPI |
MS.gene91807 | MS.gene019468 | PPI |
MS.gene91807 | MS.gene022562 | PPI |
MS.gene91807 | MS.gene91808 | PPI |
MS.gene91807 | MS.gene38854 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91807.t1 | MTR_8g005295 | 92.816 | 515 | 34 | 1 | 1 | 515 | 1 | 512 | 0.0 | 984 |
MS.gene91807.t1 | MTR_8g005285 | 88.178 | 516 | 44 | 1 | 1 | 516 | 1 | 499 | 0.0 | 932 |
MS.gene91807.t1 | MTR_8g005325 | 49.513 | 513 | 189 | 9 | 8 | 515 | 27 | 474 | 2.58e-161 | 467 |
MS.gene91807.t1 | MTR_8g005235 | 49.603 | 504 | 179 | 11 | 19 | 515 | 9 | 444 | 2.08e-158 | 458 |
MS.gene91807.t1 | MTR_0209s0060 | 46.263 | 495 | 181 | 13 | 19 | 508 | 11 | 425 | 4.14e-134 | 395 |
MS.gene91807.t1 | MTR_0209s0030 | 46.263 | 495 | 181 | 13 | 19 | 508 | 11 | 425 | 4.14e-134 | 395 |
MS.gene91807.t1 | MTR_8g006525 | 46.245 | 506 | 188 | 13 | 12 | 512 | 4 | 430 | 1.44e-132 | 392 |
MS.gene91807.t1 | MTR_8g005265 | 45.749 | 494 | 189 | 15 | 36 | 515 | 27 | 455 | 4.24e-128 | 381 |
MS.gene91807.t1 | MTR_8g005225 | 42.722 | 529 | 225 | 14 | 1 | 518 | 1 | 462 | 3.98e-123 | 369 |
MS.gene91807.t1 | MTR_3g079390 | 33.468 | 496 | 247 | 16 | 17 | 503 | 20 | 441 | 2.14e-64 | 216 |
MS.gene91807.t1 | MTR_6g010920 | 31.557 | 488 | 220 | 17 | 32 | 508 | 21 | 405 | 1.09e-61 | 208 |
MS.gene91807.t1 | MTR_6g009590 | 30.346 | 491 | 226 | 16 | 22 | 497 | 7 | 396 | 5.97e-60 | 204 |
MS.gene91807.t1 | MTR_6g011050 | 30.297 | 472 | 218 | 14 | 36 | 497 | 24 | 394 | 5.51e-58 | 198 |
MS.gene91807.t1 | MTR_4g112660 | 38.824 | 340 | 118 | 9 | 188 | 510 | 90 | 356 | 2.57e-57 | 195 |
MS.gene91807.t1 | MTR_4g112660 | 46.429 | 84 | 41 | 3 | 36 | 118 | 6 | 86 | 6.69e-15 | 76.6 |
MS.gene91807.t1 | MTR_6g009610 | 30.947 | 475 | 226 | 14 | 29 | 497 | 18 | 396 | 8.83e-57 | 195 |
MS.gene91807.t1 | MTR_6g011060 | 29.555 | 494 | 236 | 15 | 25 | 503 | 14 | 410 | 5.26e-56 | 193 |
MS.gene91807.t1 | MTR_0024s0080 | 30.538 | 465 | 218 | 14 | 38 | 497 | 27 | 391 | 3.28e-52 | 183 |
MS.gene91807.t1 | MTR_6g010890 | 29.492 | 512 | 240 | 19 | 19 | 508 | 10 | 422 | 1.39e-51 | 181 |
MS.gene91807.t1 | MTR_3g107590 | 30.526 | 475 | 225 | 14 | 34 | 496 | 24 | 405 | 2.27e-51 | 181 |
MS.gene91807.t1 | MTR_6g010810 | 29.424 | 486 | 229 | 16 | 35 | 508 | 21 | 404 | 4.62e-49 | 174 |
MS.gene91807.t1 | MTR_6g009170 | 29.577 | 497 | 230 | 17 | 22 | 496 | 7 | 405 | 2.24e-48 | 173 |
MS.gene91807.t1 | MTR_2g036320 | 27.349 | 479 | 263 | 14 | 38 | 514 | 69 | 464 | 9.99e-44 | 162 |
MS.gene91807.t1 | MTR_2g041180 | 27.331 | 472 | 261 | 13 | 36 | 505 | 50 | 441 | 4.04e-42 | 157 |
MS.gene91807.t1 | MTR_2g035640 | 27.189 | 434 | 219 | 9 | 73 | 503 | 1 | 340 | 4.60e-38 | 143 |
MS.gene91807.t1 | MTR_5g086340 | 25.684 | 475 | 272 | 10 | 37 | 508 | 33 | 429 | 3.55e-34 | 134 |
MS.gene91807.t1 | MTR_5g016570 | 27.311 | 476 | 258 | 14 | 32 | 488 | 97 | 503 | 2.87e-32 | 130 |
MS.gene91807.t1 | MTR_6g010850 | 28.889 | 405 | 181 | 14 | 109 | 503 | 33 | 340 | 7.31e-32 | 126 |
MS.gene91807.t1 | MTR_7g011980 | 34.211 | 190 | 101 | 3 | 316 | 503 | 166 | 333 | 1.76e-25 | 107 |
MS.gene91807.t1 | MTR_7g011980 | 31.579 | 171 | 66 | 4 | 29 | 199 | 18 | 137 | 6.02e-17 | 82.8 |
MS.gene91807.t1 | MTR_7g060310 | 24.540 | 489 | 290 | 15 | 46 | 503 | 39 | 479 | 1.83e-23 | 103 |
MS.gene91807.t1 | MTR_7g059540 | 22.397 | 509 | 273 | 15 | 38 | 503 | 29 | 458 | 2.25e-22 | 100 |
MS.gene91807.t1 | MTR_6g009580 | 30.841 | 214 | 119 | 4 | 289 | 496 | 29 | 219 | 1.26e-21 | 94.4 |
MS.gene91807.t1 | MTR_7g059540 | 22.287 | 516 | 275 | 16 | 38 | 503 | 28 | 467 | 2.24e-21 | 97.4 |
MS.gene91807.t1 | MTR_7g060260 | 22.532 | 466 | 256 | 12 | 38 | 488 | 28 | 403 | 3.31e-19 | 90.5 |
MS.gene91807.t1 | MTR_7g060115 | 22.822 | 482 | 269 | 15 | 53 | 505 | 44 | 451 | 2.79e-18 | 87.8 |
MS.gene91807.t1 | MTR_7g060320 | 22.774 | 483 | 272 | 16 | 38 | 488 | 28 | 441 | 4.17e-18 | 87.4 |
MS.gene91807.t1 | MTR_5g086230 | 30.939 | 181 | 103 | 4 | 37 | 213 | 29 | 191 | 8.04e-18 | 82.4 |
MS.gene91807.t1 | MTR_0182s0060 | 24.852 | 507 | 303 | 17 | 40 | 503 | 37 | 508 | 5.66e-17 | 84.3 |
MS.gene91807.t1 | MTR_7g059525 | 28.877 | 187 | 113 | 2 | 318 | 503 | 108 | 275 | 6.02e-17 | 81.6 |
MS.gene91807.t1 | MTR_7g059520 | 30.409 | 171 | 99 | 3 | 318 | 487 | 5 | 156 | 1.37e-16 | 78.2 |
MS.gene91807.t1 | MTR_6g009600 | 32.593 | 135 | 67 | 2 | 318 | 451 | 23 | 134 | 1.53e-16 | 77.4 |
MS.gene91807.t1 | MTR_7g060080 | 32.432 | 148 | 95 | 2 | 363 | 505 | 42 | 189 | 1.75e-16 | 78.6 |
MS.gene91807.t1 | MTR_5g087580 | 25.980 | 204 | 126 | 3 | 316 | 518 | 41 | 220 | 2.97e-16 | 78.2 |
MS.gene91807.t1 | MTR_5g086260 | 28.079 | 203 | 120 | 4 | 318 | 518 | 136 | 314 | 4.20e-16 | 79.7 |
MS.gene91807.t1 | MTR_7g446270 | 23.780 | 492 | 273 | 20 | 38 | 488 | 31 | 461 | 7.00e-16 | 80.5 |
MS.gene91807.t1 | MTR_7g060220 | 23.191 | 470 | 259 | 14 | 38 | 488 | 27 | 413 | 1.16e-15 | 79.7 |
MS.gene91807.t1 | MTR_7g059480 | 32.394 | 142 | 95 | 1 | 363 | 503 | 624 | 765 | 6.01e-15 | 78.2 |
MS.gene91807.t1 | MTR_4g009340 | 31.176 | 170 | 104 | 4 | 36 | 205 | 42 | 198 | 6.25e-15 | 77.8 |
MS.gene91807.t1 | MTR_4g009340 | 27.841 | 176 | 103 | 4 | 315 | 489 | 376 | 528 | 7.64e-11 | 65.1 |
MS.gene91807.t1 | MTR_7g060840 | 31.333 | 150 | 92 | 3 | 367 | 515 | 287 | 426 | 7.54e-15 | 77.0 |
MS.gene91807.t1 | MTR_7g060020 | 33.803 | 142 | 90 | 3 | 367 | 505 | 291 | 431 | 9.51e-15 | 76.6 |
MS.gene91807.t1 | MTR_4g009620 | 32.727 | 165 | 97 | 4 | 36 | 200 | 42 | 192 | 8.08e-14 | 74.3 |
MS.gene91807.t1 | MTR_4g009590 | 27.895 | 190 | 124 | 4 | 36 | 225 | 42 | 218 | 1.06e-13 | 73.9 |
MS.gene91807.t1 | MTR_4g009590 | 29.104 | 134 | 94 | 1 | 373 | 505 | 411 | 544 | 9.20e-12 | 67.8 |
MS.gene91807.t1 | MTR_8g042170 | 31.788 | 151 | 89 | 2 | 367 | 503 | 299 | 449 | 2.32e-13 | 72.8 |
MS.gene91807.t1 | MTR_7g060160 | 33.333 | 147 | 84 | 5 | 367 | 505 | 263 | 403 | 4.08e-13 | 71.6 |
MS.gene91807.t1 | MTR_2g036310 | 29.927 | 137 | 93 | 2 | 371 | 505 | 16 | 151 | 1.38e-12 | 66.2 |
MS.gene91807.t1 | MTR_7g017620 | 28.788 | 198 | 126 | 6 | 4 | 200 | 9 | 192 | 1.57e-12 | 70.5 |
MS.gene91807.t1 | MTR_7g017620 | 30.075 | 133 | 91 | 2 | 371 | 502 | 399 | 530 | 3.87e-11 | 65.9 |
MS.gene91807.t1 | MTR_8g042830 | 21.965 | 346 | 209 | 10 | 184 | 518 | 124 | 419 | 2.82e-12 | 68.9 |
MS.gene91807.t1 | MTR_7g059810 | 24.249 | 466 | 248 | 18 | 46 | 488 | 38 | 421 | 7.40e-12 | 67.8 |
MS.gene91807.t1 | MTR_7g059510 | 28.369 | 141 | 98 | 2 | 369 | 506 | 282 | 422 | 1.52e-11 | 66.6 |
MS.gene91807.t1 | MTR_3g466740 | 27.320 | 194 | 122 | 6 | 37 | 230 | 31 | 205 | 2.26e-11 | 66.6 |
MS.gene91807.t1 | MTR_7g067600 | 27.273 | 176 | 114 | 3 | 37 | 209 | 29 | 193 | 6.03e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91807.t1 | AT2G44930 | 30.162 | 494 | 239 | 9 | 36 | 508 | 84 | 492 | 5.63e-56 | 196 |
MS.gene91807.t1 | AT3G60470 | 29.870 | 539 | 269 | 15 | 38 | 508 | 34 | 531 | 3.99e-55 | 194 |
MS.gene91807.t1 | AT2G28580 | 28.921 | 491 | 244 | 10 | 36 | 508 | 41 | 444 | 4.32e-52 | 184 |
MS.gene91807.t1 | AT2G28580 | 28.921 | 491 | 244 | 10 | 36 | 508 | 109 | 512 | 1.25e-51 | 184 |
MS.gene91807.t1 | AT2G28580 | 28.921 | 491 | 244 | 10 | 36 | 508 | 123 | 526 | 1.66e-51 | 184 |
MS.gene91807.t1 | AT2G28580 | 29.167 | 480 | 240 | 9 | 36 | 508 | 109 | 495 | 2.93e-51 | 183 |
MS.gene91807.t1 | AT2G28580 | 29.167 | 480 | 240 | 9 | 36 | 508 | 123 | 509 | 3.82e-51 | 183 |
MS.gene91807.t1 | AT4G31980 | 27.660 | 470 | 231 | 12 | 36 | 496 | 293 | 662 | 9.64e-47 | 173 |
MS.gene91807.t1 | AT5G11290 | 25.519 | 482 | 265 | 15 | 24 | 503 | 22 | 411 | 4.78e-40 | 150 |
MS.gene91807.t1 | AT1G67150 | 27.178 | 482 | 246 | 12 | 35 | 503 | 5 | 394 | 5.88e-39 | 147 |
MS.gene91807.t1 | AT1G67150 | 27.178 | 482 | 246 | 12 | 35 | 503 | 5 | 394 | 5.88e-39 | 147 |
MS.gene91807.t1 | AT2G36430 | 25.055 | 455 | 259 | 11 | 36 | 488 | 45 | 419 | 1.04e-38 | 147 |
MS.gene91807.t1 | AT3G50150 | 27.542 | 472 | 270 | 11 | 38 | 505 | 92 | 495 | 1.64e-38 | 147 |
MS.gene91807.t1 | AT1G67150 | 26.955 | 486 | 246 | 12 | 35 | 503 | 5 | 398 | 2.07e-38 | 145 |
MS.gene91807.t1 | AT3G50170 | 25.819 | 519 | 304 | 13 | 2 | 503 | 69 | 523 | 7.48e-38 | 146 |
MS.gene91807.t1 | AT3G47250 | 26.176 | 489 | 273 | 13 | 27 | 503 | 52 | 464 | 9.07e-37 | 142 |
MS.gene91807.t1 | AT3G47250 | 26.176 | 489 | 273 | 13 | 27 | 503 | 52 | 464 | 9.07e-37 | 142 |
MS.gene91807.t1 | AT3G47250 | 26.176 | 489 | 273 | 13 | 27 | 503 | 52 | 464 | 9.07e-37 | 142 |
MS.gene91807.t1 | AT3G47210 | 28.166 | 458 | 220 | 12 | 25 | 467 | 82 | 445 | 1.93e-35 | 138 |
MS.gene91807.t1 | AT3G50140 | 26.273 | 491 | 259 | 14 | 38 | 505 | 115 | 525 | 3.51e-34 | 135 |
MS.gene91807.t1 | AT3G50120 | 26.383 | 470 | 283 | 12 | 38 | 503 | 105 | 515 | 3.40e-33 | 133 |
MS.gene91807.t1 | AT2G28580 | 27.488 | 422 | 197 | 11 | 36 | 437 | 123 | 455 | 5.92e-33 | 131 |
MS.gene91807.t1 | AT3G50130 | 26.432 | 454 | 270 | 12 | 38 | 488 | 141 | 533 | 3.17e-31 | 127 |
MS.gene91807.t1 | AT3G50180 | 25.667 | 487 | 259 | 16 | 32 | 503 | 174 | 572 | 7.77e-29 | 120 |
MS.gene91807.t1 | AT3G47200 | 25.470 | 479 | 261 | 13 | 25 | 488 | 35 | 432 | 1.77e-27 | 115 |
MS.gene91807.t1 | AT3G47200 | 25.470 | 479 | 261 | 13 | 25 | 488 | 35 | 432 | 1.77e-27 | 115 |
MS.gene91807.t1 | AT5G22540 | 24.065 | 428 | 227 | 12 | 36 | 453 | 31 | 370 | 2.47e-26 | 112 |
MS.gene91807.t1 | AT3G44710 | 24.248 | 499 | 316 | 14 | 36 | 516 | 47 | 501 | 5.67e-26 | 111 |
MS.gene91807.t1 | AT3G50190 | 23.579 | 475 | 259 | 13 | 38 | 503 | 98 | 477 | 6.39e-23 | 102 |
MS.gene91807.t1 | AT5G11290 | 23.095 | 433 | 240 | 14 | 73 | 503 | 1 | 342 | 1.55e-22 | 99.4 |
MS.gene91807.t1 | AT1G65985 | 34.054 | 185 | 79 | 4 | 38 | 204 | 16 | 175 | 3.88e-20 | 93.6 |
MS.gene91807.t1 | AT1G65985 | 37.903 | 124 | 76 | 1 | 368 | 490 | 304 | 427 | 1.79e-16 | 82.4 |
MS.gene91807.t1 | AT1G65985 | 34.054 | 185 | 79 | 4 | 38 | 204 | 16 | 175 | 3.88e-20 | 93.6 |
MS.gene91807.t1 | AT1G65985 | 37.903 | 124 | 76 | 1 | 368 | 490 | 304 | 427 | 1.79e-16 | 82.4 |
MS.gene91807.t1 | AT3G50170 | 29.439 | 214 | 121 | 5 | 2 | 205 | 69 | 262 | 7.90e-20 | 92.4 |
MS.gene91807.t1 | AT5G22550 | 31.579 | 209 | 119 | 8 | 2 | 206 | 9 | 197 | 1.02e-19 | 92.4 |
MS.gene91807.t1 | AT3G50160 | 31.285 | 179 | 103 | 4 | 32 | 210 | 100 | 258 | 1.88e-18 | 88.6 |
MS.gene91807.t1 | AT3G50160 | 27.679 | 224 | 133 | 3 | 286 | 503 | 285 | 485 | 9.54e-17 | 83.6 |
MS.gene91807.t1 | AT1G67150 | 29.947 | 187 | 107 | 3 | 318 | 503 | 188 | 351 | 2.84e-18 | 87.0 |
MS.gene91807.t1 | AT1G67150 | 31.694 | 183 | 94 | 5 | 35 | 207 | 5 | 166 | 2.89e-15 | 77.8 |
MS.gene91807.t1 | AT3G50150 | 31.429 | 175 | 99 | 4 | 38 | 210 | 92 | 247 | 1.02e-16 | 83.2 |
MS.gene91807.t1 | AT3G50140 | 30.952 | 168 | 96 | 4 | 38 | 205 | 115 | 262 | 7.85e-16 | 80.1 |
MS.gene91807.t1 | AT5G22560 | 26.882 | 186 | 103 | 4 | 36 | 207 | 47 | 213 | 2.47e-15 | 79.0 |
MS.gene91807.t1 | AT3G50190 | 27.717 | 184 | 110 | 5 | 38 | 221 | 98 | 258 | 6.72e-13 | 70.9 |
MS.gene91807.t1 | AT3G50190 | 27.717 | 184 | 110 | 5 | 38 | 221 | 98 | 258 | 6.72e-13 | 70.9 |
MS.gene91807.t1 | AT3G50190 | 27.717 | 184 | 110 | 5 | 38 | 221 | 98 | 258 | 8.17e-13 | 70.1 |
MS.gene91807.t1 | AT3G02645 | 32.203 | 118 | 79 | 1 | 373 | 489 | 380 | 497 | 8.81e-13 | 71.2 |
Find 59 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATAAGCATTATCAGAATATT+TGG | 0.154201 | 8.3:+81506430 | MS.gene91807:CDS |
CTTGATACTGACATTGTTCT+AGG | 0.157660 | 8.3:-81506209 | None:intergenic |
ATTAACTTTGTTACTGTTCT+TGG | 0.162375 | 8.3:-81505985 | None:intergenic |
CTGCTAAACTTAACTCTTCT+AGG | 0.268196 | 8.3:-81505117 | None:intergenic |
ACCATTTCAAAGCGCGTCTA+AGG | 0.318480 | 8.3:+81506130 | MS.gene91807:CDS |
ACGTGAAACTAAGCTTGTTT+TGG | 0.326591 | 8.3:+81505750 | MS.gene91807:CDS |
GAAACATAATTGCATATATA+AGG | 0.329067 | 8.3:-81506237 | None:intergenic |
GACTTTGTAGTTCTTGATCA+TGG | 0.348123 | 8.3:-81505320 | None:intergenic |
TCTTTATTTCCAAGGTGAAT+TGG | 0.350401 | 8.3:-81505220 | None:intergenic |
ATCAAATCAGTGAAATGTTT+AGG | 0.353279 | 8.3:-81505898 | None:intergenic |
TTACCTTCCAGCTGATTTAA+CGG | 0.361070 | 8.3:+81505930 | MS.gene91807:CDS |
AACATTTCACTGATTTGATA+AGG | 0.390830 | 8.3:+81505902 | MS.gene91807:CDS |
ACTCCTCAATTAATCTCAAT+TGG | 0.392658 | 8.3:+81505196 | MS.gene91807:CDS |
GTAACAAAGTTAATAGATTC+TGG | 0.396787 | 8.3:+81505994 | MS.gene91807:CDS |
AAGAAACCGTTCATGGAAAT+CGG | 0.400354 | 8.3:+81505465 | MS.gene91807:CDS |
GAAGTGGCAGTGCTTGTTAA+TGG | 0.401978 | 8.3:+81506348 | MS.gene91807:CDS |
ATAGACGCTCATAGAAGAAA+TGG | 0.406927 | 8.3:-81505279 | None:intergenic |
TCCTTAGACGCGCTTTGAAA+TGG | 0.415205 | 8.3:-81506131 | None:intergenic |
TCTAAATCCGTTAAATCAGC+TGG | 0.442093 | 8.3:-81505937 | None:intergenic |
AGCAATAACCATAGGTTTCA+AGG | 0.443493 | 8.3:+81505874 | MS.gene91807:CDS |
CAGAGAAAATAACTCAGAAA+TGG | 0.447228 | 8.3:-81506075 | None:intergenic |
AATCAACATCAACTTGTGTA+TGG | 0.449318 | 8.3:-81506278 | None:intergenic |
ATCTGAAACTGAATATGAAA+TGG | 0.454211 | 8.3:+81505069 | MS.gene91807:CDS |
GTTTAGGACCTTGAAACCTA+TGG | 0.455366 | 8.3:-81505882 | None:intergenic |
ACAAGTTGATGTTGATTTGT+TGG | 0.455972 | 8.3:+81506284 | MS.gene91807:CDS |
AGAGCTAGTTCTACTTTGGT+TGG | 0.457619 | 8.3:+81506501 | MS.gene91807:CDS |
GGAAGTGATTGTGCATGAAA+TGG | 0.461128 | 8.3:+81506314 | MS.gene91807:CDS |
GGACCAATTGAGATTAATTG+AGG | 0.464532 | 8.3:-81505199 | None:intergenic |
TTGGAGAGCTAGTTCTACTT+TGG | 0.466290 | 8.3:+81506497 | MS.gene91807:CDS |
AGTGGCTTAATTGGTGATGT+TGG | 0.493716 | 8.3:+81505805 | MS.gene91807:CDS |
GTTGAAGTTCTTTATTTCCA+AGG | 0.495312 | 8.3:-81505228 | None:intergenic |
TCTAAGGATTCCGCAGTTGA+AGG | 0.499213 | 8.3:+81506146 | MS.gene91807:CDS |
ATTACATTCTAACACAAGCT+TGG | 0.511928 | 8.3:+81505551 | MS.gene91807:CDS |
TGTTGATTTGTTGGTGGAGA+AGG | 0.512953 | 8.3:+81506293 | MS.gene91807:CDS |
TTGATACTGACATTGTTCTA+GGG | 0.522905 | 8.3:-81506208 | None:intergenic |
ATGTTTCAATCTAAATGACT+TGG | 0.523292 | 8.3:-81505521 | None:intergenic |
GAAGTGATTGTGCATGAAAT+GGG | 0.523677 | 8.3:+81506315 | MS.gene91807:CDS |
AGCAGACTGTAGCATCTACA+AGG | 0.532357 | 8.3:+81505135 | MS.gene91807:CDS |
TTAACGGATTTAGAAAAGAG+TGG | 0.543465 | 8.3:+81505946 | MS.gene91807:CDS |
CACCAACCACAATGCAGCCA+TGG | 0.546124 | 8.3:-81506460 | None:intergenic |
TGGTTCAAACATGAAAATGA+AGG | 0.548134 | 8.3:-81506111 | None:intergenic |
TCAATTGGTCCAATTCACCT+TGG | 0.558480 | 8.3:+81505211 | MS.gene91807:CDS |
TTAATTGGTGATGTTGGTAG+TGG | 0.564871 | 8.3:+81505811 | MS.gene91807:CDS |
ACCACAATGCAGCCATGGTA+CGG | 0.571593 | 8.3:-81506455 | None:intergenic |
AGTTGATGTTGATTTGTTGG+TGG | 0.572996 | 8.3:+81506287 | MS.gene91807:CDS |
ATGTATCCGATTTCCATGAA+CGG | 0.580945 | 8.3:-81505471 | None:intergenic |
TGGTCTTTGTAAACATGTTG+TGG | 0.582048 | 8.3:+81506368 | MS.gene91807:CDS |
AATCTATGAGCAATAACCAT+AGG | 0.583238 | 8.3:+81505866 | MS.gene91807:CDS |
GACATTGTTCTAGGGCAATG+AGG | 0.593451 | 8.3:-81506200 | None:intergenic |
GGCTCAGCAAAAGCATCACA+AGG | 0.605591 | 8.3:+81505572 | MS.gene91807:CDS |
AACTTTGTACGTCTTGCCAG+AGG | 0.608544 | 8.3:+81506552 | MS.gene91807:CDS |
TACCATGGCTGCATTGTGGT+TGG | 0.611964 | 8.3:+81506458 | MS.gene91807:CDS |
AATCCGTTAAATCAGCTGGA+AGG | 0.622325 | 8.3:-81505933 | None:intergenic |
AATGGGAAGTGATAAAGAAG+TGG | 0.638138 | 8.3:+81506332 | MS.gene91807:CDS |
GAATATTTGGAACCGTACCA+TGG | 0.643141 | 8.3:+81506443 | MS.gene91807:CDS |
TTTCTGGTAGAAGAGACCTC+TGG | 0.652209 | 8.3:-81506568 | None:intergenic |
GTGTGATCAACCTTCAACTG+CGG | 0.710202 | 8.3:-81506156 | None:intergenic |
GCTCAGCAAAAGCATCACAA+GGG | 0.717992 | 8.3:+81505573 | MS.gene91807:CDS |
ACCGTACCATGGCTGCATTG+TGG | 0.722473 | 8.3:+81506454 | MS.gene91807:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAGCATTATCAGAATATT+TGG | + | chr8.3:81506430-81506449 | MS.gene91807:CDS | 20.0% |
!! | GAAACATAATTGCATATATA+AGG | - | chr8.3:81506240-81506259 | None:intergenic | 20.0% |
!!! | AAATTTTTCTTTGCTTATGT+TGG | - | chr8.3:81505398-81505417 | None:intergenic | 20.0% |
!!! | AAGAAATATTATTTTGTGAG+TGG | + | chr8.3:81505787-81505806 | MS.gene91807:CDS | 20.0% |
!!! | AATTTTTCTTTGCTTATGTT+GGG | - | chr8.3:81505397-81505416 | None:intergenic | 20.0% |
!!! | TTTATCAGAATGTTTTTTCT+TGG | - | chr8.3:81505848-81505867 | None:intergenic | 20.0% |
! | ATCAAATCAGTGAAATGTTT+AGG | - | chr8.3:81505901-81505920 | None:intergenic | 25.0% |
! | ATGTTTCAATCTAAATGACT+TGG | - | chr8.3:81505524-81505543 | None:intergenic | 25.0% |
! | ATTAACTTTGTTACTGTTCT+TGG | - | chr8.3:81505988-81506007 | None:intergenic | 25.0% |
! | CATAAGCAAAGAAAAATTTG+TGG | + | chr8.3:81505399-81505418 | MS.gene91807:CDS | 25.0% |
! | GTAACAAAGTTAATAGATTC+TGG | + | chr8.3:81505994-81506013 | MS.gene91807:CDS | 25.0% |
!! | ATCTGAAACTGAATATGAAA+TGG | + | chr8.3:81505069-81505088 | MS.gene91807:CDS | 25.0% |
!! | ATTTGTGGAAACAATTTTGT+TGG | + | chr8.3:81505414-81505433 | MS.gene91807:CDS | 25.0% |
!! | CAAGATCAAGAAAACTTTTA+TGG | - | chr8.3:81505687-81505706 | None:intergenic | 25.0% |
!!! | AACATTTCACTGATTTGATA+AGG | + | chr8.3:81505902-81505921 | MS.gene91807:CDS | 25.0% |
AATCAACATCAACTTGTGTA+TGG | - | chr8.3:81506281-81506300 | None:intergenic | 30.0% | |
AATCTATGAGCAATAACCAT+AGG | + | chr8.3:81505866-81505885 | MS.gene91807:CDS | 30.0% | |
ACTCCTCAATTAATCTCAAT+TGG | + | chr8.3:81505196-81505215 | MS.gene91807:CDS | 30.0% | |
AGATTCATCAGCACAAAAAA+AGG | - | chr8.3:81505625-81505644 | None:intergenic | 30.0% | |
ATTACATTCTAACACAAGCT+TGG | + | chr8.3:81505551-81505570 | MS.gene91807:CDS | 30.0% | |
CAATGCAACAACACAAAAAA+AGG | + | chr8.3:81505251-81505270 | MS.gene91807:CDS | 30.0% | |
CAGAGAAAATAACTCAGAAA+TGG | - | chr8.3:81506078-81506097 | None:intergenic | 30.0% | |
TGGTTCAAACATGAAAATGA+AGG | - | chr8.3:81506114-81506133 | None:intergenic | 30.0% | |
TTGATACTGACATTGTTCTA+GGG | - | chr8.3:81506211-81506230 | None:intergenic | 30.0% | |
! | ACACAACAGAATGTGTTTTA+AGG | + | chr8.3:81506175-81506194 | MS.gene91807:CDS | 30.0% |
! | GTTGAAGTTCTTTATTTCCA+AGG | - | chr8.3:81505231-81505250 | None:intergenic | 30.0% |
! | TATTTTGTGAGTGGCTTAAT+TGG | + | chr8.3:81505796-81505815 | MS.gene91807:CDS | 30.0% |
! | TCTTTATTTCCAAGGTGAAT+TGG | - | chr8.3:81505223-81505242 | None:intergenic | 30.0% |
! | TTTTGTTAAGAAACCGTTCA+TGG | + | chr8.3:81505458-81505477 | MS.gene91807:CDS | 30.0% |
!! | AAGCTTCTTGTTTCACTTTT+CGG | - | chr8.3:81505174-81505193 | None:intergenic | 30.0% |
!! | ACAAGTTGATGTTGATTTGT+TGG | + | chr8.3:81506284-81506303 | MS.gene91807:CDS | 30.0% |
!! | TTAACGGATTTAGAAAAGAG+TGG | + | chr8.3:81505946-81505965 | MS.gene91807:CDS | 30.0% |
!!! | CTTTTTTTGTGTTGTTGCAT+TGG | - | chr8.3:81505253-81505272 | None:intergenic | 30.0% |
AAGAAACCGTTCATGGAAAT+CGG | + | chr8.3:81505465-81505484 | MS.gene91807:CDS | 35.0% | |
AATGGGAAGTGATAAAGAAG+TGG | + | chr8.3:81506332-81506351 | MS.gene91807:CDS | 35.0% | |
AGCAATAACCATAGGTTTCA+AGG | + | chr8.3:81505874-81505893 | MS.gene91807:CDS | 35.0% | |
ATAGACGCTCATAGAAGAAA+TGG | - | chr8.3:81505282-81505301 | None:intergenic | 35.0% | |
ATGTATCCGATTTCCATGAA+CGG | - | chr8.3:81505474-81505493 | None:intergenic | 35.0% | |
CTGCTAAACTTAACTCTTCT+AGG | - | chr8.3:81505120-81505139 | None:intergenic | 35.0% | |
CTTGATACTGACATTGTTCT+AGG | - | chr8.3:81506212-81506231 | None:intergenic | 35.0% | |
GAAGTGATTGTGCATGAAAT+GGG | + | chr8.3:81506315-81506334 | MS.gene91807:CDS | 35.0% | |
GACTTTGTAGTTCTTGATCA+TGG | - | chr8.3:81505323-81505342 | None:intergenic | 35.0% | |
GGACCAATTGAGATTAATTG+AGG | - | chr8.3:81505202-81505221 | None:intergenic | 35.0% | |
TCTAAATCCGTTAAATCAGC+TGG | - | chr8.3:81505940-81505959 | None:intergenic | 35.0% | |
TGGTCTTTGTAAACATGTTG+TGG | + | chr8.3:81506368-81506387 | MS.gene91807:CDS | 35.0% | |
! | TTACCTTCCAGCTGATTTAA+CGG | + | chr8.3:81505930-81505949 | MS.gene91807:CDS | 35.0% |
!! | ACGTGAAACTAAGCTTGTTT+TGG | + | chr8.3:81505750-81505769 | MS.gene91807:CDS | 35.0% |
!! | AGTTGATGTTGATTTGTTGG+TGG | + | chr8.3:81506287-81506306 | MS.gene91807:CDS | 35.0% |
!! | CTGAGTTATTTTCTCTGCTT+AGG | + | chr8.3:81506081-81506100 | MS.gene91807:CDS | 35.0% |
!! | TGGTGTATTTTAGAGATGCT+TGG | + | chr8.3:81506478-81506497 | MS.gene91807:CDS | 35.0% |
!! | TTAATTGGTGATGTTGGTAG+TGG | + | chr8.3:81505811-81505830 | MS.gene91807:CDS | 35.0% |
!!! | CTTCTTTTTTGTCGTCGTTA+GGG | - | chr8.3:81505663-81505682 | None:intergenic | 35.0% |
!!! | GTGAGTTTTGAGAAAGTTGT+GGG | + | chr8.3:81506018-81506037 | MS.gene91807:CDS | 35.0% |
!!! | TCTTCTTTTTTGTCGTCGTT+AGG | - | chr8.3:81505664-81505683 | None:intergenic | 35.0% |
!!! | TGAGTTTTGAGAAAGTTGTG+GGG | + | chr8.3:81506019-81506038 | MS.gene91807:CDS | 35.0% |
!!! | TGTGAGTTTTGAGAAAGTTG+TGG | + | chr8.3:81506017-81506036 | MS.gene91807:CDS | 35.0% |
AATCCGTTAAATCAGCTGGA+AGG | - | chr8.3:81505936-81505955 | None:intergenic | 40.0% | |
GGAAGTGATTGTGCATGAAA+TGG | + | chr8.3:81506314-81506333 | MS.gene91807:CDS | 40.0% | |
TCAATTGGTCCAATTCACCT+TGG | + | chr8.3:81505211-81505230 | MS.gene91807:CDS | 40.0% | |
! | CACAAGGGACTTGATTTTGT+TGG | + | chr8.3:81505588-81505607 | MS.gene91807:CDS | 40.0% |
! | GAATATTTGGAACCGTACCA+TGG | + | chr8.3:81506443-81506462 | MS.gene91807:CDS | 40.0% |
! | GTTTAGGACCTTGAAACCTA+TGG | - | chr8.3:81505885-81505904 | None:intergenic | 40.0% |
!! | AGAGCTAGTTCTACTTTGGT+TGG | + | chr8.3:81506501-81506520 | MS.gene91807:CDS | 40.0% |
!! | AGTGGCTTAATTGGTGATGT+TGG | + | chr8.3:81505805-81505824 | MS.gene91807:CDS | 40.0% |
!! | TGTTGATTTGTTGGTGGAGA+AGG | + | chr8.3:81506293-81506312 | MS.gene91807:CDS | 40.0% |
!! | TTCACTTTTCGGAGATTGTG+AGG | - | chr8.3:81505163-81505182 | None:intergenic | 40.0% |
!! | TTGGAGAGCTAGTTCTACTT+TGG | + | chr8.3:81506497-81506516 | MS.gene91807:CDS | 40.0% |
!!! | GTTGGATGCTGTTTTCATCA+TGG | + | chr8.3:81505432-81505451 | MS.gene91807:CDS | 40.0% |
AACTTTGTACGTCTTGCCAG+AGG | + | chr8.3:81506552-81506571 | MS.gene91807:CDS | 45.0% | |
ACCATTTCAAAGCGCGTCTA+AGG | + | chr8.3:81506130-81506149 | MS.gene91807:CDS | 45.0% | |
AGCAGACTGTAGCATCTACA+AGG | + | chr8.3:81505135-81505154 | MS.gene91807:CDS | 45.0% | |
GTGTGATCAACCTTCAACTG+CGG | - | chr8.3:81506159-81506178 | None:intergenic | 45.0% | |
TCTAAGGATTCCGCAGTTGA+AGG | + | chr8.3:81506146-81506165 | MS.gene91807:CDS | 45.0% | |
! | GAAGTGGCAGTGCTTGTTAA+TGG | + | chr8.3:81506348-81506367 | MS.gene91807:CDS | 45.0% |
! | TTTCTGGTAGAAGAGACCTC+TGG | - | chr8.3:81506571-81506590 | None:intergenic | 45.0% |
!! | GACATTGTTCTAGGGCAATG+AGG | - | chr8.3:81506203-81506222 | None:intergenic | 45.0% |
!! | GCTCAGCAAAAGCATCACAA+GGG | + | chr8.3:81505573-81505592 | MS.gene91807:CDS | 45.0% |
!! | TCCTTAGACGCGCTTTGAAA+TGG | - | chr8.3:81506134-81506153 | None:intergenic | 45.0% |
ACCACAATGCAGCCATGGTA+CGG | - | chr8.3:81506458-81506477 | None:intergenic | 50.0% | |
TACCATGGCTGCATTGTGGT+TGG | + | chr8.3:81506458-81506477 | MS.gene91807:CDS | 50.0% | |
!! | GGCTCAGCAAAAGCATCACA+AGG | + | chr8.3:81505572-81505591 | MS.gene91807:CDS | 50.0% |
ACCGTACCATGGCTGCATTG+TGG | + | chr8.3:81506454-81506473 | MS.gene91807:CDS | 55.0% | |
CACCAACCACAATGCAGCCA+TGG | - | chr8.3:81506463-81506482 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 81505037 | 81506605 | 81505037 | ID=MS.gene91807 |
chr8.3 | mRNA | 81505037 | 81506605 | 81505037 | ID=MS.gene91807.t1;Parent=MS.gene91807 |
chr8.3 | exon | 81505037 | 81506605 | 81505037 | ID=MS.gene91807.t1.exon1;Parent=MS.gene91807.t1 |
chr8.3 | CDS | 81505037 | 81506605 | 81505037 | ID=cds.MS.gene91807.t1;Parent=MS.gene91807.t1 |
Gene Sequence |
Protein sequence |