AlfalfaGEDB | MS.gene061336

M. sativa cultivar XinJiangDaYe / MS.gene061336

KEGG: -
GO: -
PFAM: PF03140.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene061336.t1	XP_013443753.1	95.3	426	20	0	1	426	1	426	3.60E-245	857.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene061336.t1	Q9SD53	26.6	425	256	11	19	417	38	432	3.3e-29	131.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene061336.t1	A0A072TLP8	95.3	426	20	0	1	426	1	426	2.6e-245	857.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050020	MS.gene061336	0.850828	1.32E-60	-1.69E-46
MS.gene050100	MS.gene061336	0.815772	7.79E-52	-1.69E-46
MS.gene050137	MS.gene061336	0.803528	3.34E-49	-1.69E-46
MS.gene050206	MS.gene061336	0.801685	8.01E-49	-1.69E-46
MS.gene050298	MS.gene061336	0.8064	8.38E-50	-1.69E-46
MS.gene050563	MS.gene061336	0.832016	1.20E-55	-1.69E-46
MS.gene050584	MS.gene061336	0.827442	1.56E-54	-1.69E-46
MS.gene050585	MS.gene061336	0.812071	5.10E-51	-1.69E-46
MS.gene050586	MS.gene061336	0.80928	2.05E-50	-1.69E-46
MS.gene050587	MS.gene061336	0.815267	1.01E-51	-1.69E-46
MS.gene050807	MS.gene061336	0.801462	8.90E-49	-1.69E-46
MS.gene05143	MS.gene061336	0.828487	8.75E-55	-1.69E-46
MS.gene051789	MS.gene061336	0.846772	1.76E-59	-1.69E-46
MS.gene052142	MS.gene061336	0.881368	2.54E-70	-1.69E-46
MS.gene052187	MS.gene061336	0.850976	1.20E-60	-1.69E-46
MS.gene052456	MS.gene061336	0.821654	3.60E-53	-1.69E-46
MS.gene052698	MS.gene061336	0.843734	1.17E-58	-1.69E-46
MS.gene053074	MS.gene061336	0.887742	1.09E-72	-1.69E-46
MS.gene053383	MS.gene061336	0.882677	8.53E-71	-1.69E-46
MS.gene053798	MS.gene061336	0.800101	1.69E-48	-1.69E-46
MS.gene05456	MS.gene061336	0.862372	5.31E-64	-1.69E-46
MS.gene054596	MS.gene061336	0.836823	7.47E-57	-1.69E-46
MS.gene055357	MS.gene061336	0.806356	8.56E-50	-1.69E-46
MS.gene055359	MS.gene061336	0.960199	2.74E-118	-1.69E-46
MS.gene058168	MS.gene061336	0.859312	4.51E-63	-1.69E-46
MS.gene059006	MS.gene061336	0.877546	5.76E-69	-1.69E-46
MS.gene059124	MS.gene061336	0.816834	4.51E-52	-1.69E-46
MS.gene059632	MS.gene061336	0.865344	6.32E-65	-1.69E-46
MS.gene059768	MS.gene061336	0.805722	1.16E-49	-1.69E-46
MS.gene060513	MS.gene061336	0.802693	4.97E-49	-1.69E-46
MS.gene060691	MS.gene061336	0.80287	4.57E-49	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene061336	MS.gene91806	PPI
MS.gene061336	MS.gene019468	PPI
MS.gene061336	MS.gene022562	PPI
MS.gene061336	MS.gene91808	PPI
MS.gene061336	MS.gene38854	PPI
MS.gene061336	MS.gene055359	PPI
MS.gene061336	MS.gene91805	PPI
MS.gene061336	MS.gene061337	PPI
MS.gene061336	MS.gene061334	PPI
MS.gene061336	MS.gene055358	PPI
MS.gene061336	MS.gene022560	PPI
MS.gene061336	MS.gene91809	PPI
MS.gene061336	MS.gene022561	PPI
MS.gene061336	MS.gene055354	PPI
MS.gene061336	MS.gene061335	PPI
MS.gene91807	MS.gene061336	PPI
MS.gene061336	MS.gene055356	PPI
MS.gene061336	MS.gene055357	PPI
MS.gene022559	MS.gene061336	PPI
MS.gene061336	MS.gene022559	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene061336.t1	MTR_8g005235	95.082	427	21	0	1	427	1	427	0.0	853
MS.gene061336.t1	MTR_8g005325	78.505	428	91	1	1	427	30	457	0.0	711
MS.gene061336.t1	MTR_8g006525	77.700	426	83	3	2	427	3	416	0.0	674
MS.gene061336.t1	MTR_0209s0060	77.327	419	87	3	3	420	5	416	0.0	667
MS.gene061336.t1	MTR_0209s0030	77.327	419	87	3	3	420	5	416	0.0	667
MS.gene061336.t1	MTR_8g005295	51.033	484	165	9	9	427	19	495	1.71e-156	452
MS.gene061336.t1	MTR_8g005285	52.137	468	170	9	9	427	19	481	1.95e-153	444
MS.gene061336.t1	MTR_8g005265	53.699	419	172	9	26	427	26	439	1.70e-145	422
MS.gene061336.t1	MTR_8g005225	51.408	426	191	6	12	426	22	442	7.35e-139	405
MS.gene061336.t1	MTR_4g112660	41.608	423	143	12	26	427	5	344	6.47e-88	271
MS.gene061336.t1	MTR_6g009590	33.879	428	232	17	12	426	7	396	3.42e-65	214
MS.gene061336.t1	MTR_6g011050	33.721	430	240	13	3	426	4	394	3.73e-65	214
MS.gene061336.t1	MTR_0024s0080	34.074	405	222	12	28	426	26	391	1.82e-64	213
MS.gene061336.t1	MTR_6g011060	33.107	441	241	14	4	427	2	405	1.25e-62	208
MS.gene061336.t1	MTR_3g107590	35.035	431	239	11	6	425	5	405	1.95e-62	208
MS.gene061336.t1	MTR_6g009610	34.266	429	229	17	9	426	10	396	7.06e-62	206
MS.gene061336.t1	MTR_6g010920	33.012	415	232	13	21	427	19	395	1.19e-60	202
MS.gene061336.t1	MTR_6g010890	32.494	437	244	17	9	426	7	411	2.34e-60	202
MS.gene061336.t1	MTR_3g079390	31.828	443	240	15	14	427	27	436	6.68e-58	196
MS.gene061336.t1	MTR_6g009170	33.176	425	234	14	17	425	15	405	7.66e-58	196
MS.gene061336.t1	MTR_6g010810	32.857	420	234	14	17	426	12	393	6.67e-56	190
MS.gene061336.t1	MTR_2g041180	30.848	389	235	14	26	405	49	412	8.96e-49	173
MS.gene061336.t1	MTR_2g036320	28.465	404	264	11	26	425	66	448	2.58e-45	164
MS.gene061336.t1	MTR_5g016570	27.692	455	250	12	12	417	79	503	1.76e-41	154
MS.gene061336.t1	MTR_6g010850	31.977	344	178	13	97	426	33	334	9.24e-38	141
MS.gene061336.t1	MTR_2g035640	30.458	371	213	10	64	426	1	334	2.37e-36	137
MS.gene061336.t1	MTR_5g086340	25.701	428	255	12	24	426	29	418	1.98e-33	130
MS.gene061336.t1	MTR_6g009580	35.071	211	110	5	221	425	30	219	5.98e-30	116
MS.gene061336.t1	MTR_7g011980	35.047	214	110	6	222	427	136	328	3.69e-29	117
MS.gene061336.t1	MTR_7g011980	34.641	153	64	6	20	169	18	137	4.34e-15	76.6
MS.gene061336.t1	MTR_8g042830	25.166	453	235	12	7	426	18	399	5.58e-28	115
MS.gene061336.t1	MTR_7g060260	26.714	423	263	14	9	417	14	403	4.13e-25	107
MS.gene061336.t1	MTR_7g060840	25.740	439	268	16	3	417	5	409	2.08e-24	105
MS.gene061336.t1	MTR_7g060310	23.614	487	272	13	3	417	6	464	3.64e-23	102
MS.gene061336.t1	MTR_7g060320	24.550	444	284	14	9	417	14	441	1.85e-22	99.8
MS.gene061336.t1	MTR_6g009600	36.774	155	73	6	244	394	17	150	1.25e-21	91.3
MS.gene061336.t1	MTR_7g446270	24.249	466	282	16	10	417	9	461	5.69e-21	95.1
MS.gene061336.t1	MTR_7g059540	24.153	472	275	14	3	421	6	447	1.14e-20	94.4
MS.gene061336.t1	MTR_7g060115	26.263	396	232	15	41	398	41	414	2.05e-20	93.6
MS.gene061336.t1	MTR_7g060020	25.400	437	258	18	10	414	9	409	2.54e-20	93.2
MS.gene061336.t1	MTR_7g059540	23.790	496	257	16	3	421	5	456	3.01e-20	93.2
MS.gene061336.t1	MTR_5g087580	28.652	178	106	2	249	425	42	199	2.50e-19	86.7
MS.gene061336.t1	MTR_7g059510	24.312	436	239	13	12	413	20	398	5.91e-19	89.0
MS.gene061336.t1	MTR_5g086230	32.787	183	105	5	1	173	7	181	1.04e-18	84.3
MS.gene061336.t1	MTR_7g059810	25.185	405	250	11	41	417	42	421	1.27e-18	88.2
MS.gene061336.t1	MTR_7g059520	29.050	179	105	4	250	427	5	162	2.69e-18	82.4
MS.gene061336.t1	MTR_7g060220	25.126	398	246	12	44	417	44	413	4.16e-18	86.3
MS.gene061336.t1	MTR_8g042170	26.591	440	259	16	29	426	26	443	5.37e-18	86.3
MS.gene061336.t1	MTR_5g086260	31.176	170	95	4	250	417	136	285	1.70e-16	80.5
MS.gene061336.t1	MTR_7g059525	27.586	174	109	2	245	417	103	260	2.02e-16	79.7
MS.gene061336.t1	MTR_7g060160	26.178	382	200	15	41	397	41	365	3.20e-16	80.5
MS.gene061336.t1	MTR_7g060080	29.082	196	116	4	233	427	1	174	3.71e-16	77.0
MS.gene061336.t1	MTR_8g037920	25.369	406	241	16	48	417	7	386	1.21e-15	79.0
MS.gene061336.t1	MTR_3g107600	27.830	212	101	6	221	426	406	571	1.35e-15	79.3
MS.gene061336.t1	MTR_0182s0060	31.953	169	97	4	250	417	342	493	1.63e-15	79.0
MS.gene061336.t1	MTR_4g009340	31.677	161	94	6	27	175	42	198	8.60e-14	73.6
MS.gene061336.t1	MTR_4g009340	31.667	120	81	1	300	418	409	528	8.11e-12	67.4
MS.gene061336.t1	MTR_7g059480	30.709	127	87	1	292	417	624	750	1.03e-13	73.6
MS.gene061336.t1	MTR_4g009590	27.523	218	139	7	27	232	42	252	2.78e-13	72.0
MS.gene061336.t1	MTR_4g009620	32.919	161	91	7	27	175	42	197	4.18e-13	71.6
MS.gene061336.t1	MTR_3g466740	25.258	388	228	15	29	379	32	394	8.71e-13	70.1
MS.gene061336.t1	MTR_7g017620	32.203	118	79	1	302	418	401	518	1.48e-12	69.7
MS.gene061336.t1	MTR_0067s0010	25.000	392	218	17	29	379	45	401	2.81e-12	68.6
MS.gene061336.t1	MTR_2g036310	31.200	125	83	2	303	425	19	142	5.24e-11	61.2
MS.gene061336.t1	MTR_6g010830	40.476	84	48	2	318	401	1	82	5.28e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene061336.t1	AT2G28580	34.965	429	216	13	27	427	41	434	1.47e-63	212
MS.gene061336.t1	AT2G28580	34.965	429	216	14	27	427	109	502	5.21e-63	212
MS.gene061336.t1	AT2G28580	34.965	429	216	14	27	427	123	516	9.53e-63	212
MS.gene061336.t1	AT2G44930	33.410	434	225	11	24	423	75	478	8.25e-62	208
MS.gene061336.t1	AT2G28580	34.772	417	216	13	27	427	109	485	4.81e-61	206
MS.gene061336.t1	AT2G28580	34.772	417	216	13	27	427	123	499	9.29e-61	206
MS.gene061336.t1	AT1G67150	29.298	413	249	7	28	427	7	389	1.36e-50	176
MS.gene061336.t1	AT1G67150	29.298	413	249	7	28	427	7	389	1.36e-50	176
MS.gene061336.t1	AT1G67150	29.017	417	249	7	28	427	7	393	4.79e-50	175
MS.gene061336.t1	AT4G31980	29.177	401	247	11	26	422	292	659	9.96e-49	176
MS.gene061336.t1	AT3G50150	28.668	443	253	13	4	417	70	478	1.53e-47	170
MS.gene061336.t1	AT3G50170	27.991	443	263	10	4	417	93	508	6.40e-46	166
MS.gene061336.t1	AT5G11290	26.812	414	270	9	14	423	18	402	1.47e-44	160
MS.gene061336.t1	AT3G50160	28.095	420	250	9	22	427	99	480	1.71e-44	162
MS.gene061336.t1	AT2G36430	28.288	403	253	12	25	417	43	419	1.84e-44	160
MS.gene061336.t1	AT2G28580	35.000	360	171	14	27	358	123	447	2.07e-44	161
MS.gene061336.t1	AT1G65985	30.626	431	238	12	28	417	15	425	3.25e-44	160
MS.gene061336.t1	AT1G65985	30.626	431	238	12	28	417	15	425	3.25e-44	160
MS.gene061336.t1	AT3G47210	31.017	403	220	13	19	401	85	449	4.66e-44	160
MS.gene061336.t1	AT3G50140	27.438	441	266	11	5	417	94	508	6.89e-44	161
MS.gene061336.t1	AT3G50120	28.764	445	253	14	12	417	81	500	2.34e-43	159
MS.gene061336.t1	AT1G67150	27.670	412	214	9	28	427	7	346	2.71e-43	155
MS.gene061336.t1	AT3G50130	28.764	445	256	14	4	417	119	533	3.44e-41	154
MS.gene061336.t1	AT3G50180	28.176	433	259	12	4	417	158	557	9.84e-41	153
MS.gene061336.t1	AT5G22540	27.603	413	241	12	27	417	31	407	3.85e-40	149
MS.gene061336.t1	AT3G47250	25.576	434	261	11	19	422	53	454	4.46e-37	141
MS.gene061336.t1	AT3G47250	25.576	434	261	11	19	422	53	454	4.46e-37	141
MS.gene061336.t1	AT3G47250	25.576	434	261	11	19	422	53	454	4.46e-37	141
MS.gene061336.t1	AT3G47200	26.761	426	254	13	19	417	38	432	5.53e-37	141
MS.gene061336.t1	AT3G47200	26.761	426	254	13	19	417	38	432	5.53e-37	141
MS.gene061336.t1	AT5G22550	26.281	449	240	14	27	417	44	459	4.12e-35	136
MS.gene061336.t1	AT3G50190	26.835	436	246	13	5	417	77	462	1.79e-34	134
MS.gene061336.t1	AT5G11290	25.758	330	216	7	96	423	31	333	5.48e-30	119
MS.gene061336.t1	AT3G44710	24.609	447	285	14	20	422	40	478	7.76e-27	112
MS.gene061336.t1	AT3G60470	34.034	238	108	7	21	227	26	245	8.61e-27	112
MS.gene061336.t1	AT3G60470	29.915	234	122	7	199	423	317	517	5.30e-22	98.6
MS.gene061336.t1	AT3G50150	25.762	361	216	12	4	326	70	416	4.95e-24	103
MS.gene061336.t1	AT3G50170	25.333	300	190	7	4	276	93	385	1.77e-22	99.4
MS.gene061336.t1	AT3G50140	25.839	298	189	8	5	276	94	385	5.88e-22	97.8
MS.gene061336.t1	AT5G22560	27.753	227	139	5	27	236	47	265	7.37e-22	98.2
MS.gene061336.t1	AT3G50190	26.027	292	164	10	5	276	77	336	5.93e-18	85.1
MS.gene061336.t1	AT3G50190	26.027	292	164	10	5	276	77	336	8.17e-18	85.1
MS.gene061336.t1	AT3G50190	26.027	292	164	10	5	276	77	336	8.17e-18	85.1
MS.gene061336.t1	AT3G02645	28.000	175	107	2	245	418	341	497	1.39e-16	82.4
MS.gene061336.t1	AT3G44700	32.258	124	78	5	14	131	34	157	6.04e-13	68.2

Find 55 sgRNAs with CRISPR-Local

Find 78 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGAAGCAGTTCTACCATAAT+TGG	0.193723	8.1:-87184902	MS.gene061336:CDS
ATAGATATTTCCATTACTTT+TGG	0.255996	8.1:-87185948	MS.gene061336:CDS
ATTGGTTGACATGATACTAT+TGG	0.305573	8.1:-87185812	MS.gene061336:CDS
TGATATCTGCGAATTTCTTT+TGG	0.336636	8.1:+87185845	None:intergenic
TAGAACAGCTATCCCAATTA+TGG	0.339485	8.1:+87184889	None:intergenic
TTGAGTTGGTTTCTTTGTTT+AGG	0.358010	8.1:-87185313	MS.gene061336:CDS
AGAAGCAATCGTGCACGAAT+TGG	0.361763	8.1:-87185089	MS.gene061336:CDS
GTCGTGTTATTACCAACTTA+TGG	0.367785	8.1:-87185005	MS.gene061336:CDS
ACAAAGAATGTTTGATGGTA+AGG	0.389012	8.1:-87185426	MS.gene061336:CDS
ACACCTCTACTCATATCTAT+TGG	0.391628	8.1:-87186021	MS.gene061336:CDS
CTGGGATGTTAATTATTTGT+TGG	0.398663	8.1:+87186127	None:intergenic
GAAAGTTTGAGGCAAAGAAA+TGG	0.405649	8.1:-87185528	MS.gene061336:CDS
AAAGTTTGAGGCAAAGAAAT+GGG	0.406405	8.1:-87185527	MS.gene061336:CDS
TTGCAAATGTAAGGCTCATC+AGG	0.412545	8.1:+87185175	None:intergenic
TAGTAACTCTGCGTCTTCTT+CGG	0.437485	8.1:+87185120	None:intergenic
CATTAAGATCTTCCATAAGT+TGG	0.441137	8.1:+87184993	None:intergenic
AGATATCAACAATGAACAAT+TGG	0.443215	8.1:-87185830	MS.gene061336:CDS
GAAACATAATTGCAAATGTA+AGG	0.443461	8.1:+87185166	None:intergenic
GAAGCAATCGTGCACGAATT+GGG	0.450078	8.1:-87185088	MS.gene061336:CDS
TTCACCTTCAAAAGAGTAGC+AGG	0.450633	8.1:+87186057	None:intergenic
CATCTTGTTACCCGCATCAC+AGG	0.462910	8.1:-87185564	MS.gene061336:CDS
ACTACAACAGTGAATGGAAA+AGG	0.467565	8.1:-87184967	MS.gene061336:CDS
ATTGGATTCTGTGTTCATCA+TGG	0.468580	8.1:-87185794	MS.gene061336:CDS
TCAGCTTCCGATTTATGTGT+TGG	0.469424	8.1:-87185665	MS.gene061336:CDS
ATGAACACTACAACAGTGAA+TGG	0.475271	8.1:-87184973	MS.gene061336:CDS
CTGAAGATTCCCTGTGATGC+GGG	0.477114	8.1:+87185554	None:intergenic
CAGTGAATGGAAAAGGGCTA+TGG	0.481943	8.1:-87184960	MS.gene061336:CDS
GAAGCAGTTCTACCATAATT+GGG	0.495113	8.1:-87184901	MS.gene061336:CDS
GACACTGCTCAAAAGCGATT+AGG	0.499699	8.1:+87185203	None:intergenic
GATACAACATTGAGGCCAAT+GGG	0.502608	8.1:+87186089	None:intergenic
CTTAAACTTTATGTCAAGCA+AGG	0.508420	8.1:+87185348	None:intergenic
CTACAACAGTGAATGGAAAA+GGG	0.513538	8.1:-87184966	MS.gene061336:CDS
GCAACAAAGTTGAATGAAGC+TGG	0.514234	8.1:-87185400	MS.gene061336:CDS
GGGCTATGGGTACATTAAAG+TGG	0.515344	8.1:-87184946	MS.gene061336:CDS
GCCTCAATGTTGTATCTACA+AGG	0.517588	8.1:-87186082	MS.gene061336:CDS
TAGGTTCCTCAAAACACATT+CGG	0.523556	8.1:+87185222	None:intergenic
GGCTATGGGTACATTAAAGT+GGG	0.534765	8.1:-87184945	MS.gene061336:CDS
CTAGGCGATTCCAAAAGTAA+TGG	0.536662	8.1:+87185938	None:intergenic
TCTGAAGATTCCCTGTGATG+CGG	0.546993	8.1:+87185553	None:intergenic
ATCTTCAGAAAGAAAGTTTG+AGG	0.554166	8.1:-87185539	MS.gene061336:CDS
AGATACAACATTGAGGCCAA+TGG	0.562113	8.1:+87186088	None:intergenic
AGCTGGTATAAGCTTTGAGA+AGG	0.574187	8.1:-87185383	MS.gene061336:CDS
GTTTGCACAGATTGTTAACA+AGG	0.589492	8.1:+87185044	None:intergenic
AGTGAATGGAAAAGGGCTAT+GGG	0.589763	8.1:-87184959	MS.gene061336:CDS
AAAATATAGAGCCTTCCCAT+TGG	0.601300	8.1:-87186104	MS.gene061336:CDS
ATCTTGTTACCCGCATCACA+GGG	0.604095	8.1:-87185563	MS.gene061336:CDS
CAACATTGAGGCCAATGGGA+AGG	0.610470	8.1:+87186093	None:intergenic
CAAGAAGCAATAAATCACGC+TGG	0.619840	8.1:+87185692	None:intergenic
ATGGTAGAACTGCTTCTCCA+AGG	0.620610	8.1:+87184908	None:intergenic
CCATAACAACAAAAGACTTG+AGG	0.631898	8.1:-87185989	MS.gene061336:CDS
CAAAGAAACCAACTCAACAA+AGG	0.633809	8.1:+87185319	None:intergenic
GGTCCAATAGATATGAGTAG+AGG	0.668562	8.1:+87186018	None:intergenic
GCTTTGAAGCACTTGCAACA+CGG	0.686234	8.1:+87185283	None:intergenic
GCACGAATTGGGAAGCAACG+AGG	0.702046	8.1:-87185077	MS.gene061336:CDS
ACCTTGTAGATACAACATTG+AGG	0.707204	8.1:+87186081	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TCTAAGAGAAAACAAAAAAT+GGG	-	chr8.1:87185284-87185303	MS.gene061336:CDS	20.0%
!!!	ACTGATTTTTTAGTTTCATA+GGG	+	chr8.1:87185590-87185609	None:intergenic	20.0%
!!!	ATAGATATTTCCATTACTTT+TGG	-	chr8.1:87185100-87185119	MS.gene061336:CDS	20.0%
!!!	TACTGATTTTTTAGTTTCAT+AGG	+	chr8.1:87185591-87185610	None:intergenic	20.0%
!!!	TTCTAAGAGAAAACAAAAAA+TGG	-	chr8.1:87185283-87185302	MS.gene061336:CDS	20.0%
!	AGATATCAACAATGAACAAT+TGG	-	chr8.1:87185218-87185237	MS.gene061336:CDS	25.0%
!	GAAACATAATTGCAAATGTA+AGG	+	chr8.1:87185885-87185904	None:intergenic	25.0%
!!	AGTTTTTCCAACACATAAAT+CGG	+	chr8.1:87185393-87185412	None:intergenic	25.0%
!!	TTTTCACAAAGAATGTTTGA+TGG	-	chr8.1:87185617-87185636	MS.gene061336:CDS	25.0%
!!!	TGAAATCACTTTTTTTGTCT+AGG	+	chr8.1:87185131-87185150	None:intergenic	25.0%
	AGAAAAAACCTTTGTTGAGT+TGG	-	chr8.1:87185721-87185740	MS.gene061336:CDS	30.0%
	ATCTTCAGAAAGAAAGTTTG+AGG	-	chr8.1:87185509-87185528	MS.gene061336:CDS	30.0%
	ATTGGTTGACATGATACTAT+TGG	-	chr8.1:87185236-87185255	MS.gene061336:CDS	30.0%
	CATTAAGATCTTCCATAAGT+TGG	+	chr8.1:87186058-87186077	None:intergenic	30.0%
	CTGGGATGTTAATTATTTGT+TGG	+	chr8.1:87184924-87184943	None:intergenic	30.0%
	CTTAAACTTTATGTCAAGCA+AGG	+	chr8.1:87185703-87185722	None:intergenic	30.0%
!	AAAGTTTGAGGCAAAGAAAT+GGG	-	chr8.1:87185521-87185540	MS.gene061336:CDS	30.0%
!	ACAAAGAATGTTTGATGGTA+AGG	-	chr8.1:87185622-87185641	MS.gene061336:CDS	30.0%
!	TATTTTGCTCTTCTTGTTGA+AGG	+	chr8.1:87185170-87185189	None:intergenic	30.0%
!	TGATATCTGCGAATTTCTTT+TGG	+	chr8.1:87185206-87185225	None:intergenic	30.0%
!!	CGAATTTCTTTTGGTAACAT+CGG	+	chr8.1:87185197-87185216	None:intergenic	30.0%
!!	TTGAGTTGGTTTCTTTGTTT+AGG	-	chr8.1:87185735-87185754	MS.gene061336:CDS	30.0%
	AAAATATAGAGCCTTCCCAT+TGG	-	chr8.1:87184944-87184963	MS.gene061336:CDS	35.0%
	ACACCTCTACTCATATCTAT+TGG	-	chr8.1:87185027-87185046	MS.gene061336:CDS	35.0%
	ACCTTGTAGATACAACATTG+AGG	+	chr8.1:87184970-87184989	None:intergenic	35.0%
	ACTACAACAGTGAATGGAAA+AGG	-	chr8.1:87186081-87186100	MS.gene061336:CDS	35.0%
	AGAAGCAGTTCTACCATAAT+TGG	-	chr8.1:87186146-87186165	MS.gene061336:CDS	35.0%
	ATGAACACTACAACAGTGAA+TGG	-	chr8.1:87186075-87186094	MS.gene061336:CDS	35.0%
	ATTGGATTCTGTGTTCATCA+TGG	-	chr8.1:87185254-87185273	MS.gene061336:CDS	35.0%
	CAAAGAAACCAACTCAACAA+AGG	+	chr8.1:87185732-87185751	None:intergenic	35.0%
	CCATAACAACAAAAGACTTG+AGG	-	chr8.1:87185059-87185078	MS.gene061336:CDS	35.0%
	CTACAACAGTGAATGGAAAA+GGG	-	chr8.1:87186082-87186101	MS.gene061336:CDS	35.0%
	GAAGCAGTTCTACCATAATT+GGG	-	chr8.1:87186147-87186166	MS.gene061336:CDS	35.0%
	GTTTGCACAGATTGTTAACA+AGG	+	chr8.1:87186007-87186026	None:intergenic	35.0%
	TAGGTTCCTCAAAACACATT+CGG	+	chr8.1:87185829-87185848	None:intergenic	35.0%
!	GAAAGTTTGAGGCAAAGAAA+TGG	-	chr8.1:87185520-87185539	MS.gene061336:CDS	35.0%
!	GCAATGTCAAAAAGCACAAT+TGG	-	chr8.1:87185433-87185452	MS.gene061336:CDS	35.0%
!	GTCGTGTTATTACCAACTTA+TGG	-	chr8.1:87186043-87186062	MS.gene061336:CDS	35.0%
!!	CGTGATCTACTTTTAACTGT+GGG	+	chr8.1:87185803-87185822	None:intergenic	35.0%
!!	TACTCTTTTGAAGGTGAAAG+AGG	-	chr8.1:87184996-87185015	MS.gene061336:CDS	35.0%
!!	TTGTGCTTTTTGACATTGCT+TGG	+	chr8.1:87185432-87185451	None:intergenic	35.0%
!!!	CAAGTCTTTTGTTGTTATGG+TGG	+	chr8.1:87185059-87185078	None:intergenic	35.0%
!!!	CCTCAAGTCTTTTGTTGTTA+TGG	+	chr8.1:87185062-87185081	None:intergenic	35.0%
!!!	CTTTTGTTGTTATGGTGGAT+AGG	+	chr8.1:87185054-87185073	None:intergenic	35.0%
	AGATACAACATTGAGGCCAA+TGG	+	chr8.1:87184963-87184982	None:intergenic	40.0%
	AGTGAATGGAAAAGGGCTAT+GGG	-	chr8.1:87186089-87186108	MS.gene061336:CDS	40.0%
	CAAGAAGCAATAAATCACGC+TGG	+	chr8.1:87185359-87185378	None:intergenic	40.0%
	CTAGGCGATTCCAAAAGTAA+TGG	+	chr8.1:87185113-87185132	None:intergenic	40.0%
	GATACAACATTGAGGCCAAT+GGG	+	chr8.1:87184962-87184981	None:intergenic	40.0%
	GCAACAAAGTTGAATGAAGC+TGG	-	chr8.1:87185648-87185667	MS.gene061336:CDS	40.0%
	GCCTCAATGTTGTATCTACA+AGG	-	chr8.1:87184966-87184985	MS.gene061336:CDS	40.0%
	GGCTATGGGTACATTAAAGT+GGG	-	chr8.1:87186103-87186122	MS.gene061336:CDS	40.0%
	GGTCCAATAGATATGAGTAG+AGG	+	chr8.1:87185033-87185052	None:intergenic	40.0%
	TAGTAACTCTGCGTCTTCTT+CGG	+	chr8.1:87185931-87185950	None:intergenic	40.0%
	TCAGCTTCCGATTTATGTGT+TGG	-	chr8.1:87185383-87185402	MS.gene061336:CDS	40.0%
	TTCACCTTCAAAAGAGTAGC+AGG	+	chr8.1:87184994-87185013	None:intergenic	40.0%
	TTGCAAATGTAAGGCTCATC+AGG	+	chr8.1:87185876-87185895	None:intergenic	40.0%
!	GGGAAGGCTCTATATTTTCT+GGG	+	chr8.1:87184942-87184961	None:intergenic	40.0%
!	TGGGAAGGCTCTATATTTTC+TGG	+	chr8.1:87184943-87184962	None:intergenic	40.0%
!!	AGCTGGTATAAGCTTTGAGA+AGG	-	chr8.1:87185665-87185684	MS.gene061336:CDS	40.0%
!!	GCGTGATCTACTTTTAACTG+TGG	+	chr8.1:87185804-87185823	None:intergenic	40.0%
!!	GGGTTTATTTTCGTGATCCT+TGG	-	chr8.1:87186123-87186142	MS.gene061336:CDS	40.0%
!!	TCTTTTGAAGGTGAAAGAGG+AGG	-	chr8.1:87184999-87185018	MS.gene061336:CDS	40.0%
	AGAAGCAATCGTGCACGAAT+TGG	-	chr8.1:87185959-87185978	MS.gene061336:CDS	45.0%
	ATCTTGTTACCCGCATCACA+GGG	-	chr8.1:87185485-87185504	MS.gene061336:CDS	45.0%
	ATGGTAGAACTGCTTCTCCA+AGG	+	chr8.1:87186143-87186162	None:intergenic	45.0%
	CAGTGAATGGAAAAGGGCTA+TGG	-	chr8.1:87186088-87186107	MS.gene061336:CDS	45.0%
	GAAGCAATCGTGCACGAATT+GGG	-	chr8.1:87185960-87185979	MS.gene061336:CDS	45.0%
	GACACTGCTCAAAAGCGATT+AGG	+	chr8.1:87185848-87185867	None:intergenic	45.0%
	GGGCTATGGGTACATTAAAG+TGG	-	chr8.1:87186102-87186121	MS.gene061336:CDS	45.0%
	TCTGAAGATTCCCTGTGATG+CGG	+	chr8.1:87185498-87185517	None:intergenic	45.0%
!	GGTTCCTGCTACTCTTTTGA+AGG	-	chr8.1:87184987-87185006	MS.gene061336:CDS	45.0%
!!	GCTTTGAAGCACTTGCAACA+CGG	+	chr8.1:87185768-87185787	None:intergenic	45.0%
	CAACATTGAGGCCAATGGGA+AGG	+	chr8.1:87184958-87184977	None:intergenic	50.0%
	CATCTTGTTACCCGCATCAC+AGG	-	chr8.1:87185484-87185503	MS.gene061336:CDS	50.0%
	CTGAAGATTCCCTGTGATGC+GGG	+	chr8.1:87185497-87185516	None:intergenic	50.0%
!	ACGCGACCGAATGTGTTTTG+AGG	-	chr8.1:87185820-87185839	MS.gene061336:CDS	50.0%
	GCACGAATTGGGAAGCAACG+AGG	-	chr8.1:87185971-87185990	MS.gene061336:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	87184895	87186175	87184895	ID=MS.gene061336
chr8.1	mRNA	87184895	87186175	87184895	ID=MS.gene061336.t1;Parent=MS.gene061336
chr8.1	exon	87184895	87186175	87184895	ID=MS.gene061336.t1.exon1;Parent=MS.gene061336.t1
chr8.1	CDS	87184895	87186175	87184895	ID=cds.MS.gene061336.t1;Parent=MS.gene061336.t1

Gene Sequence

>MS.gene061336

ATGGGATCTTCTATTGAAGATCATATCCAACAAATAATTAACATCCCAGAAAATATAGAGCCTTCCCATTGGCCTCAATGTTGTATCTACAAGGTTCCTGCTACTCTTTTGAAGGTGAAAGAGGAGGCTTATACACCTCTACTCATATCTATTGGACCTATCCACCATAACAACAAAAGACTTGAGGAATTGCAAGAGTACAAACATAGATATTTCCATTACTTTTGGAATCGCCTAGACAAAAAAAGTGATTTCATGAGCTACAAAGTATTCCTTCAACAAGAAGAGCAAAATATACGCCGATGTTACCAAAAGAAATTCGCAGATATCAACAATGAACAATTGGTTGACATGATACTATTGGATTCTGTGTTCATCATGGAGTTGTTTCTAAGAGAAAACAAAAAATGGGAGCACAAAGATGATTATATAATAACTCAACTTTGTGTAAGTAAAAGTATCCAGCGTGATTTATTGCTTCTTGAGAATCAGCTTCCGATTTATGTGTTGGAAAAACTATATGACACAATTGTTCCAAGCAATGTCAAAAAGCACAATTGGTTTCTCAAGCTTGCACATGAGTATTTTGCATCTTGTTACCCGCATCACAGGGAATCTTCAGAAAGAAAGTTTGAGGCAAAGAAATGGGAGAAATCACGTCATTTCACTGATTTGATTAGATATTCGTATCTCCCTATGAAACTAAAAAATCAGTATAATGATTTTCACAAAGAATGTTTGATGGTAAGGACTGCAACAAAGTTGAATGAAGCTGGTATAAGCTTTGAGAAGGTTCATAACAGATCCTTGCTTGACATAAAGTTTAAGAAAAAACCTTTGTTGAGTTGGTTTCTTTGTTTAGGTTGTTTACCGTGTTGCAAGTGCTTCAAAGCTAGATTTCTATTCCCACAGTTAAAAGTAGATCACGCGACCGAATGTGTTTTGAGGAACCTAATCGCTTTTGAGCAGTGTCACTATCCTGATGAGCCTTACATTTGCAATTATGTTTCTTTGATTGATTCTCTTATTCACACCGAAGAAGACGCAGAGTTACTAGTTGAGAAAGAAGCAATCGTGCACGAATTGGGAAGCAACGAGGAATTAGCGAGCCTTGTTAACAATCTGTGCAAACATGTTGTGACAAATTCGTCGTGTTATTACCAACTTATGGAAGATCTTAATGAACACTACAACAGTGAATGGAAAAGGGCTATGGGTACATTAAAGTGGGTTTATTTTCGTGATCCTTGGAGAAGCAGTTCTACCATAATTGGGATAGCT

Protein sequence

>MS.gene061336.t1

MGSSIEDHIQQIINIPENIEPSHWPQCCIYKVPATLLKVKEEAYTPLLISIGPIHHNNKRLEELQEYKHRYFHYFWNRLDKKSDFMSYKVFLQQEEQNIRRCYQKKFADINNEQLVDMILLDSVFIMELFLRENKKWEHKDDYIITQLCVSKSIQRDLLLLENQLPIYVLEKLYDTIVPSNVKKHNWFLKLAHEYFASCYPHHRESSERKFEAKKWEKSRHFTDLIRYSYLPMKLKNQYNDFHKECLMVRTATKLNEAGISFEKVHNRSLLDIKFKKKPLLSWFLCLGCLPCCKCFKARFLFPQLKVDHATECVLRNLIAFEQCHYPDEPYICNYVSLIDSLIHTEEDAELLVEKEAIVHELGSNEELASLVNNLCKHVVTNSSCYYQLMEDLNEHYNSEWKRAMGTLKWVYFRDPWRSSSTIIGIA