Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065836.t1 | AES63022.2 | 75.7 | 709 | 59 | 10 | 62 | 661 | 130 | 834 | 6.30E-257 | 896.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065836.t1 | Q9C7E7 | 53.1 | 654 | 227 | 11 | 79 | 658 | 139 | 786 | 1.4e-156 | 554.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065836.t1 | G7IF06 | 75.7 | 709 | 59 | 10 | 62 | 661 | 130 | 834 | 4.5e-257 | 896.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065836.t1 | MTR_1g115920 | 93.534 | 464 | 23 | 2 | 204 | 661 | 372 | 834 | 0.0 | 807 |
MS.gene065836.t1 | MTR_1g115920 | 62.724 | 279 | 38 | 12 | 4 | 221 | 43 | 316 | 3.97e-74 | 255 |
MS.gene065836.t1 | MTR_4g094355 | 89.005 | 191 | 18 | 1 | 474 | 661 | 250 | 440 | 1.45e-113 | 348 |
MS.gene065836.t1 | MTR_4g094355 | 80.498 | 241 | 13 | 2 | 150 | 390 | 45 | 251 | 2.92e-113 | 347 |
MS.gene065836.t1 | MTR_4g094355 | 83.721 | 43 | 7 | 0 | 34 | 76 | 2 | 44 | 1.70e-12 | 70.5 |
MS.gene065836.t1 | MTR_5g039050 | 86.099 | 223 | 22 | 3 | 354 | 576 | 67 | 280 | 1.65e-111 | 342 |
MS.gene065836.t1 | MTR_5g039050 | 82.222 | 45 | 7 | 1 | 216 | 259 | 6 | 50 | 5.59e-14 | 75.1 |
MS.gene065836.t1 | MTR_5g039100 | 55.814 | 215 | 28 | 7 | 3 | 175 | 5 | 194 | 5.59e-51 | 175 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065836.t1 | AT1G28060 | 52.653 | 735 | 257 | 15 | 2 | 658 | 65 | 786 | 0.0 | 639 |
MS.gene065836.t1 | AT1G28060 | 52.653 | 735 | 257 | 15 | 2 | 658 | 65 | 786 | 0.0 | 639 |
MS.gene065836.t1 | AT1G28060 | 52.653 | 735 | 257 | 15 | 2 | 658 | 65 | 786 | 0.0 | 639 |
MS.gene065836.t1 | AT3G55930 | 62.214 | 262 | 96 | 3 | 397 | 655 | 9 | 270 | 3.28e-97 | 300 |
MS.gene065836.t1 | AT3G56790 | 68.333 | 60 | 18 | 1 | 422 | 480 | 144 | 203 | 1.57e-11 | 64.7 |
Find 180 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCACACCAGAACACATTTAT+TGG | 0.127318 | 2.2:-26740325 | None:intergenic |
ATAAAATTGAAGAGTAAATT+TGG | 0.190886 | 2.2:+26739454 | MS.gene065836:CDS |
CTCATCTTGACCTTTGGTTT+TGG | 0.219944 | 2.2:-26739886 | None:intergenic |
TGCTGGGGTTCCTCATTATT+GGG | 0.233213 | 2.2:+26740434 | MS.gene065836:CDS |
AATTGGATGATAAGAGAATT+AGG | 0.237950 | 2.2:+26738675 | MS.gene065836:CDS |
ATGCTGGGGTTCCTCATTAT+TGG | 0.242299 | 2.2:+26740433 | MS.gene065836:CDS |
CTTCTGCATTCTGGAAATTA+TGG | 0.253483 | 2.2:+26739637 | MS.gene065836:CDS |
ACAGGTGTGTCCAATGTATT+TGG | 0.256768 | 2.2:-26740081 | None:intergenic |
AGAAGGAACGTAGGAGATTT+GGG | 0.270274 | 2.2:+26738711 | MS.gene065836:CDS |
TGATGAATGCAAACTGAAAA+TGG | 0.271409 | 2.2:+26739684 | MS.gene065836:CDS |
ACACACCTGTCTCACTTTAC+AGG | 0.272620 | 2.2:+26740094 | MS.gene065836:CDS |
AAGAAGGAACGTAGGAGATT+TGG | 0.290068 | 2.2:+26738710 | MS.gene065836:CDS |
CTTTGCTAGCTGTGCTTGTT+TGG | 0.291419 | 2.2:-26739503 | None:intergenic |
CTCCTTAGCTATACGCCTTT+GGG | 0.294775 | 2.2:-26739821 | None:intergenic |
CTGCTCCTGTTTAGTTAGCT+TGG | 0.303650 | 2.2:-26739785 | None:intergenic |
ACGTCCCACCACTCAATATC+TGG | 0.306527 | 2.2:-26739610 | None:intergenic |
TCTCCTTAGCTATACGCCTT+TGG | 0.307916 | 2.2:-26739822 | None:intergenic |
TTGGGAGGTTGAGGTGGTGG+AGG | 0.312517 | 2.2:-26739766 | None:intergenic |
AAGCAACCTTAGCACATTAA+AGG | 0.318390 | 2.2:+26739249 | MS.gene065836:CDS |
TGCTCCTGTTTAGTTAGCTT+GGG | 0.318790 | 2.2:-26739784 | None:intergenic |
CGTGAAGTGTTTGTGGATGC+TGG | 0.322935 | 2.2:+26740417 | MS.gene065836:CDS |
CACCACTCAATATCTGGAAT+TGG | 0.327730 | 2.2:-26739604 | None:intergenic |
GGTGGAGGGGCGGGCTCAGC+AGG | 0.333316 | 2.2:-26739751 | None:intergenic |
GACGTGGCACTTCTGCATTC+TGG | 0.335270 | 2.2:+26739628 | MS.gene065836:CDS |
AGCTTGGGAGGTTGAGGTGG+TGG | 0.339497 | 2.2:-26739769 | None:intergenic |
GTTCATCTATTTCACGTCCC+TGG | 0.343803 | 2.2:-26739198 | None:intergenic |
TCAAAATGAGGATTAGATTC+AGG | 0.353354 | 2.2:-26739334 | None:intergenic |
TGAAATACTAAAACCTGTAT+TGG | 0.355353 | 2.2:+26739303 | MS.gene065836:CDS |
ATTGGATGATAAGAGAATTA+GGG | 0.360540 | 2.2:+26738676 | MS.gene065836:CDS |
GAACCTATTGAAGCTCGATT+TGG | 0.361063 | 2.2:-26740361 | None:intergenic |
ATCAACTCTATAGCGGGCCT+TGG | 0.361133 | 2.2:-26740136 | None:intergenic |
AAATTACTCATCTTGACCTT+TGG | 0.381357 | 2.2:-26739892 | None:intergenic |
AAGTCTCATGAGGAGGATTC+TGG | 0.387509 | 2.2:+26738905 | MS.gene065836:CDS |
GGTTGAGGTGGTGGAGGGGC+GGG | 0.389700 | 2.2:-26739760 | None:intergenic |
TGTTTGTGGAGGAAGGAAAA+TGG | 0.392737 | 2.2:+26739413 | MS.gene065836:CDS |
AGGTTGAGGTGGTGGAGGGG+CGG | 0.392897 | 2.2:-26739761 | None:intergenic |
TTTGTAATTTCTATTAAGTT+CGG | 0.393587 | 2.2:-26739550 | None:intergenic |
TCTACAACTGCTGGAAAACT+TGG | 0.400509 | 2.2:+26738941 | MS.gene065836:CDS |
AGCAAGTCAATTAAGAGGTA+TGG | 0.404160 | 2.2:+26740237 | MS.gene065836:CDS |
TAGTGTGGCTCTGACATCTT+TGG | 0.404372 | 2.2:+26738823 | MS.gene065836:CDS |
TTCTTCTCACGCAGCTCAGC+AGG | 0.405655 | 2.2:-26740036 | None:intergenic |
TTGCCAAATCGAGCTTCAAT+AGG | 0.406342 | 2.2:+26740358 | MS.gene065836:CDS |
TGCAGCTGCTGAGCGTGAGC+AGG | 0.412035 | 2.2:+26739978 | MS.gene065836:CDS |
TTCATCTATTTCACGTCCCT+GGG | 0.414957 | 2.2:-26739197 | None:intergenic |
TGATAATGAGGCTAGGGTTA+AGG | 0.417089 | 2.2:+26738742 | MS.gene065836:CDS |
ATTAGTGTTGTTGTGGTTGA+AGG | 0.421250 | 2.2:+26740210 | MS.gene065836:CDS |
GAATCTACAGCTATGTTTCC+TGG | 0.422589 | 2.2:+26739106 | MS.gene065836:CDS |
TTCCTCTTATGCGAGGAGTA+TGG | 0.424460 | 2.2:-26738626 | None:intergenic |
CACCATACTCCTCGCATAAG+AGG | 0.428130 | 2.2:+26738624 | MS.gene065836:CDS |
TTTAATGTGCTAAGGTTGCT+TGG | 0.430099 | 2.2:-26739247 | None:intergenic |
ACATAGCTATGATCGGGAAT+TGG | 0.430206 | 2.2:+26738658 | MS.gene065836:CDS |
GGCTCAGCAGGCGGTTCAAT+AGG | 0.433119 | 2.2:-26739739 | None:intergenic |
CAAAGCTCCTGCGGCCTAAG+AGG | 0.436122 | 2.2:+26739380 | MS.gene065836:CDS |
TAACGTCTGGTGTAGCAATC+TGG | 0.436715 | 2.2:-26739129 | None:intergenic |
ACCTCCCAAGCTAACTAAAC+AGG | 0.443090 | 2.2:+26739780 | MS.gene065836:CDS |
TTATGCGTAGACGTATTGAT+TGG | 0.448965 | 2.2:+26740265 | MS.gene065836:CDS |
AACAGAAAATTCATCCTCTT+AGG | 0.449563 | 2.2:-26739394 | None:intergenic |
CGCCTTCTTAGCCTTTGCTA+AGG | 0.450874 | 2.2:-26738984 | None:intergenic |
GGAGGGGCGGGCTCAGCAGG+CGG | 0.453459 | 2.2:-26739748 | None:intergenic |
AGTAATTTACATAAGGTACT+AGG | 0.456676 | 2.2:+26739907 | MS.gene065836:CDS |
GTGAAGTGTTTGTGGATGCT+GGG | 0.458044 | 2.2:+26740418 | MS.gene065836:CDS |
TAGGGTTTGTGAAGCAAAGA+AGG | 0.462240 | 2.2:+26738694 | MS.gene065836:CDS |
AGATGCCAATAAATGTGTTC+TGG | 0.462586 | 2.2:+26740320 | MS.gene065836:CDS |
TGTTCTTCGTCTTGACGCCC+AGG | 0.463631 | 2.2:+26739180 | MS.gene065836:CDS |
GGGTCATCATCTACAACTGC+TGG | 0.466544 | 2.2:+26738932 | MS.gene065836:CDS |
TGGGAGGTTGAGGTGGTGGA+GGG | 0.468936 | 2.2:-26739765 | None:intergenic |
TCAGGATTGACATCCAATAC+AGG | 0.470166 | 2.2:-26739316 | None:intergenic |
GCTCAAGAAAATCGTTTGAC+TGG | 0.472903 | 2.2:+26740165 | MS.gene065836:CDS |
GGGAGGTTGAGGTGGTGGAG+GGG | 0.473436 | 2.2:-26739764 | None:intergenic |
TGCTGAGCTGCGTGAGAAGA+AGG | 0.474449 | 2.2:+26740038 | MS.gene065836:CDS |
ACCACTCAATATCTGGAATT+GGG | 0.474879 | 2.2:-26739603 | None:intergenic |
CGAAGAACAGGAACCTTGGT+TGG | 0.478730 | 2.2:-26739166 | None:intergenic |
CATGAGGAGGATTCTGGAGA+TGG | 0.480820 | 2.2:+26738911 | MS.gene065836:CDS |
TGGGGATTATTATGATAATG+AGG | 0.482713 | 2.2:+26738730 | MS.gene065836:CDS |
TTAGTTAGCTTGGGAGGTTG+AGG | 0.485289 | 2.2:-26739775 | None:intergenic |
GTGAGCAGGCTCACATAGAT+AGG | 0.485650 | 2.2:+26739992 | MS.gene065836:CDS |
GAGGAAGTTACTATTACTAA+TGG | 0.487185 | 2.2:+26738764 | MS.gene065836:CDS |
AATCGTGGCGGCTCCGATGA+TGG | 0.489243 | 2.2:-26738535 | None:intergenic |
AGCTGCTCGTGAAGTGTTTG+TGG | 0.491618 | 2.2:+26740410 | MS.gene065836:CDS |
CCTCTGTATAGTTGACAGCT+TGG | 0.492819 | 2.2:-26740458 | None:intergenic |
GTTAGCTTGGGAGGTTGAGG+TGG | 0.493935 | 2.2:-26739772 | None:intergenic |
AGATCCCACCCGGCTCGAAA+AGG | 0.494619 | 2.2:+26739945 | MS.gene065836:CDS |
AGCTAAGGAGAAAGAGCGAC+AGG | 0.494652 | 2.2:+26739834 | MS.gene065836:CDS |
GCGACAGGAGATGATTAGAC+AGG | 0.494709 | 2.2:+26739849 | MS.gene065836:CDS |
TCCTCCTTCCTTTCCTACCA+AGG | 0.496795 | 2.2:+26738850 | MS.gene065836:CDS |
CAAGATGAGTAATTTACATA+AGG | 0.497213 | 2.2:+26739900 | MS.gene065836:CDS |
GGAACCTTGGTTGGTTTCTG+AGG | 0.507895 | 2.2:-26739157 | None:intergenic |
TTCACAAGAAAGCACACAGT+TGG | 0.508164 | 2.2:+26739072 | MS.gene065836:CDS |
TGGGCGTCAAGACGAAGAAC+AGG | 0.509477 | 2.2:-26739178 | None:intergenic |
GGCGGCTCCGATGATGGTTA+CGG | 0.511230 | 2.2:-26738529 | None:intergenic |
GCAAGTCAATTAAGAGGTAT+GGG | 0.512247 | 2.2:+26740238 | MS.gene065836:CDS |
TCAACTCTATAGCGGGCCTT+GGG | 0.512863 | 2.2:-26740135 | None:intergenic |
TCCTGTTTAGTTAGCTTGGG+AGG | 0.513523 | 2.2:-26739781 | None:intergenic |
CAGGTGTGTCCAATGTATTT+GGG | 0.514012 | 2.2:-26740080 | None:intergenic |
TTTACCCTGTAAAGTGAGAC+AGG | 0.519082 | 2.2:-26740099 | None:intergenic |
TCACAAGAAAGCACACAGTT+GGG | 0.520179 | 2.2:+26739073 | MS.gene065836:CDS |
TGATGGTATTAGTGTTGTTG+TGG | 0.521019 | 2.2:+26740203 | MS.gene065836:CDS |
CGAAGATACCTTGGTAGGAA+AGG | 0.521337 | 2.2:-26738858 | None:intergenic |
GTGGAAGCAAGTCAATTAAG+AGG | 0.522404 | 2.2:+26740232 | MS.gene065836:CDS |
ATTATTATGATAATGAGGCT+AGG | 0.526801 | 2.2:+26738735 | MS.gene065836:CDS |
TTCATCATCTATAGTACCGT+TGG | 0.528603 | 2.2:-26739668 | None:intergenic |
TAGAGAACATAGCTATGATC+GGG | 0.530400 | 2.2:+26738652 | MS.gene065836:CDS |
ACTTCGATTTAGATCGATGA+TGG | 0.530842 | 2.2:-26738571 | None:intergenic |
TGATTGGACTGATGTTTCAA+AGG | 0.530923 | 2.2:+26740281 | MS.gene065836:CDS |
CACACCTGTCTCACTTTACA+GGG | 0.531003 | 2.2:+26740095 | MS.gene065836:CDS |
ATTTAGATCGATGATGGCAG+TGG | 0.531501 | 2.2:-26738565 | None:intergenic |
GTCAGAGCCACACTAGCAGC+AGG | 0.532669 | 2.2:-26738815 | None:intergenic |
TTCTGAGGGATAGTAACGTC+TGG | 0.532884 | 2.2:-26739142 | None:intergenic |
TGCCTTAGCAAAGGCTAAGA+AGG | 0.534221 | 2.2:+26738982 | MS.gene065836:CDS |
GACCCAAAGGCGTATAGCTA+AGG | 0.535984 | 2.2:+26739819 | MS.gene065836:CDS |
AGTGTTGTTGTGGTTGAAGG+TGG | 0.536548 | 2.2:+26740213 | MS.gene065836:CDS |
TAATGAGGCTAGGGTTAAGG+AGG | 0.542515 | 2.2:+26738745 | MS.gene065836:CDS |
AGCTCAAGCAAAAGAGCTGA+AGG | 0.543647 | 2.2:+26739480 | MS.gene065836:CDS |
TGATTATTCACGTGTTGCCG+TGG | 0.545488 | 2.2:+26738787 | MS.gene065836:CDS |
GAACCTTGGTTGGTTTCTGA+GGG | 0.546067 | 2.2:-26739156 | None:intergenic |
AGCTGCGTGAGAAGAAGGAA+AGG | 0.547194 | 2.2:+26740043 | MS.gene065836:CDS |
ATAGAGAACATAGCTATGAT+CGG | 0.548241 | 2.2:+26738651 | MS.gene065836:CDS |
AGATATTGAGTGGTGGGACG+TGG | 0.548713 | 2.2:+26739612 | MS.gene065836:CDS |
TTATTATGATAATGAGGCTA+GGG | 0.548857 | 2.2:+26738736 | MS.gene065836:CDS |
CCCATTCTCTCATCAAAATG+AGG | 0.549338 | 2.2:-26739346 | None:intergenic |
CAAACAAGCACAGCTAGCAA+AGG | 0.555686 | 2.2:+26739504 | MS.gene065836:CDS |
GGGATCACCTGCTGCTAGTG+TGG | 0.556603 | 2.2:+26738808 | MS.gene065836:CDS |
TCGATGATGGCAGTGGTCAT+CGG | 0.557491 | 2.2:-26738558 | None:intergenic |
GGCAGTGGTCATCGGAATCG+TGG | 0.561202 | 2.2:-26738550 | None:intergenic |
TGTTGACCTTTAATGTGCTA+AGG | 0.561959 | 2.2:-26739255 | None:intergenic |
GTTCTTCGTCTTGACGCCCA+GGG | 0.562372 | 2.2:+26739181 | MS.gene065836:CDS |
ATTAACATCAACTCTATAGC+GGG | 0.562728 | 2.2:-26740142 | None:intergenic |
AATTCATCCTCTTAGGCCGC+AGG | 0.563858 | 2.2:-26739387 | None:intergenic |
TCTGGTGTAGCAATCTGGCC+AGG | 0.566957 | 2.2:-26739124 | None:intergenic |
AACGCGACCGTAACCATCAT+CGG | 0.568326 | 2.2:+26738522 | MS.gene065836:CDS |
GATACCTTGGTAGGAAAGGA+AGG | 0.574315 | 2.2:-26738854 | None:intergenic |
GTATTATGACCCAAATACAT+TGG | 0.579784 | 2.2:+26740071 | MS.gene065836:CDS |
GTAATTTACATAAGGTACTA+GGG | 0.581923 | 2.2:+26739908 | MS.gene065836:CDS |
ATCGAAGTGCGATGAAGAGA+GGG | 0.582378 | 2.2:+26738586 | MS.gene065836:CDS |
ATGAGGAGGATTCTGGAGAT+GGG | 0.584035 | 2.2:+26738912 | MS.gene065836:CDS |
CTCTTATGCGAGGAGTATGG+TGG | 0.584930 | 2.2:-26738623 | None:intergenic |
TTGGTAGGAAAGGAAGGAGG+AGG | 0.584935 | 2.2:-26738848 | None:intergenic |
CTAAGGCATCACTACTAGAG+AGG | 0.588190 | 2.2:-26738967 | None:intergenic |
TGGTAGGAAAGGAAGGAGGA+GGG | 0.588204 | 2.2:-26738847 | None:intergenic |
GGTAGGAAAGGAAGGAGGAG+GGG | 0.590732 | 2.2:-26738846 | None:intergenic |
TGAAAATAACAAGTCTCATG+AGG | 0.598446 | 2.2:+26738895 | MS.gene065836:CDS |
AATTCCAGATATTGAGTGGT+GGG | 0.600042 | 2.2:+26739606 | MS.gene065836:CDS |
AATCGAAGTGCGATGAAGAG+AGG | 0.601185 | 2.2:+26738585 | MS.gene065836:CDS |
TGAAGAGAGGGAAGATTCAG+TGG | 0.601353 | 2.2:+26738598 | MS.gene065836:CDS |
AGTAGTAATCGAAGATACCT+TGG | 0.605884 | 2.2:-26738867 | None:intergenic |
TCTATCTTTCCTCTTATGCG+AGG | 0.606208 | 2.2:-26738633 | None:intergenic |
CGACAGGAGATGATTAGACA+GGG | 0.610803 | 2.2:+26739850 | MS.gene065836:CDS |
AAGACGAAGAACAGGAACCT+TGG | 0.611050 | 2.2:-26739170 | None:intergenic |
GATTATTCACGTGTTGCCGT+GGG | 0.611853 | 2.2:+26738788 | MS.gene065836:CDS |
AAATGACCTCTCTCATCCCA+AGG | 0.616566 | 2.2:+26740119 | MS.gene065836:CDS |
GGATGTGCGGTGATTTGTGA+TGG | 0.616908 | 2.2:+26740186 | MS.gene065836:CDS |
TGTAATGAAAGCAAAACTGA+AGG | 0.617069 | 2.2:+26739579 | MS.gene065836:CDS |
ACAGCTTGGTCCCAATAATG+AGG | 0.617442 | 2.2:-26740444 | None:intergenic |
TAGTAGTGATGCCTTAGCAA+AGG | 0.620911 | 2.2:+26738973 | MS.gene065836:CDS |
AGCACAGCTAGCAAAGGCAA+AGG | 0.626359 | 2.2:+26739510 | MS.gene065836:CDS |
CAATTCCAGATATTGAGTGG+TGG | 0.626915 | 2.2:+26739605 | MS.gene065836:CDS |
GCAGGCGGTTCAATAGGCCG+AGG | 0.628346 | 2.2:-26739733 | None:intergenic |
CCAATAAATGTGTTCTGGTG+TGG | 0.635559 | 2.2:+26740325 | MS.gene065836:CDS |
ACTAGCAGCAGGTGATCCCA+CGG | 0.637646 | 2.2:-26738804 | None:intergenic |
GAATTTGAGTTATTCAACTG+AGG | 0.639060 | 2.2:-26739052 | None:intergenic |
GAAGGAACGTAGGAGATTTG+GGG | 0.644948 | 2.2:+26738712 | MS.gene065836:CDS |
ACCCAATTCCAGATATTGAG+TGG | 0.645164 | 2.2:+26739602 | MS.gene065836:CDS |
AGCGGGCCTTGGGATGAGAG+AGG | 0.647591 | 2.2:-26740125 | None:intergenic |
AAATAACAAGTCTCATGAGG+AGG | 0.649017 | 2.2:+26738898 | MS.gene065836:CDS |
CTTAGCAAAGGCTAAGAAGG+CGG | 0.652364 | 2.2:+26738985 | MS.gene065836:CDS |
GTAATCGAAGATACCTTGGT+AGG | 0.655300 | 2.2:-26738863 | None:intergenic |
GGACGTGAAATAGATGAACA+TGG | 0.655823 | 2.2:+26739202 | MS.gene065836:CDS |
AAATGTGTTCTGGTGTGGCA+AGG | 0.657323 | 2.2:+26740330 | MS.gene065836:CDS |
TGAAGTGTTTGTGGATGCTG+GGG | 0.659104 | 2.2:+26740419 | MS.gene065836:CDS |
CATAGAACCTCCAAAACCAA+AGG | 0.659248 | 2.2:+26739876 | MS.gene065836:CDS |
AATTATGGTGACATTGCCAA+CGG | 0.664930 | 2.2:+26739652 | MS.gene065836:CDS |
CATTAACATCAACTCTATAG+CGG | 0.679052 | 2.2:-26740143 | None:intergenic |
AGTGGTCATCGGAATCGTGG+CGG | 0.685299 | 2.2:-26738547 | None:intergenic |
TCGACAAAACAAAGCTCCTG+CGG | 0.696622 | 2.2:+26739371 | MS.gene065836:CDS |
GTGAAGCAAAGAAGGAACGT+AGG | 0.699586 | 2.2:+26738702 | MS.gene065836:CDS |
AAGCAACTCAAGATCCCACC+CGG | 0.703568 | 2.2:+26739935 | MS.gene065836:CDS |
AAATCGTTTGACTGGATGTG+CGG | 0.704841 | 2.2:+26740173 | MS.gene065836:CDS |
ACCTTGGTAGGAAAGGAAGG+AGG | 0.710617 | 2.2:-26738851 | None:intergenic |
CCAAGCTGTCAACTATACAG+AGG | 0.726035 | 2.2:+26740458 | MS.gene065836:CDS |
TATCCCTCAGAAACCAACCA+AGG | 0.735568 | 2.2:+26739153 | MS.gene065836:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAAATTGAAGAGTAAATT+TGG | + | chr2.2:26739454-26739473 | MS.gene065836:CDS | 15.0% |
!! | TTTGTAATTTCTATTAAGTT+CGG | - | chr2.2:26739553-26739572 | None:intergenic | 15.0% |
! | AATTGGATGATAAGAGAATT+AGG | + | chr2.2:26738675-26738694 | MS.gene065836:CDS | 25.0% |
! | ATTGGATGATAAGAGAATTA+GGG | + | chr2.2:26738676-26738695 | MS.gene065836:CDS | 25.0% |
! | CAAGATGAGTAATTTACATA+AGG | + | chr2.2:26739900-26739919 | MS.gene065836:CDS | 25.0% |
! | TGAAATACTAAAACCTGTAT+TGG | + | chr2.2:26739303-26739322 | MS.gene065836:CDS | 25.0% |
!! | AGTAATTTACATAAGGTACT+AGG | + | chr2.2:26739907-26739926 | MS.gene065836:CDS | 25.0% |
!! | ATTATTATGATAATGAGGCT+AGG | + | chr2.2:26738735-26738754 | MS.gene065836:CDS | 25.0% |
!! | GGAAAAATTCAACTTTTATG+TGG | + | chr2.2:26739705-26739724 | MS.gene065836:CDS | 25.0% |
!! | GTAATTTACATAAGGTACTA+GGG | + | chr2.2:26739908-26739927 | MS.gene065836:CDS | 25.0% |
!! | TTATTATGATAATGAGGCTA+GGG | + | chr2.2:26738736-26738755 | MS.gene065836:CDS | 25.0% |
AAATTACTCATCTTGACCTT+TGG | - | chr2.2:26739895-26739914 | None:intergenic | 30.0% | |
AACAGAAAATTCATCCTCTT+AGG | - | chr2.2:26739397-26739416 | None:intergenic | 30.0% | |
ATAGAGAACATAGCTATGAT+CGG | + | chr2.2:26738651-26738670 | MS.gene065836:CDS | 30.0% | |
ATTAACATCAACTCTATAGC+GGG | - | chr2.2:26740145-26740164 | None:intergenic | 30.0% | |
CATTAACATCAACTCTATAG+CGG | - | chr2.2:26740146-26740165 | None:intergenic | 30.0% | |
GAGGAAGTTACTATTACTAA+TGG | + | chr2.2:26738764-26738783 | MS.gene065836:CDS | 30.0% | |
GTATTATGACCCAAATACAT+TGG | + | chr2.2:26740071-26740090 | MS.gene065836:CDS | 30.0% | |
TCAAAATGAGGATTAGATTC+AGG | - | chr2.2:26739337-26739356 | None:intergenic | 30.0% | |
TGAAAATAACAAGTCTCATG+AGG | + | chr2.2:26738895-26738914 | MS.gene065836:CDS | 30.0% | |
TGATGAATGCAAACTGAAAA+TGG | + | chr2.2:26739684-26739703 | MS.gene065836:CDS | 30.0% | |
TGTAATGAAAGCAAAACTGA+AGG | + | chr2.2:26739579-26739598 | MS.gene065836:CDS | 30.0% | |
! | GAATTTGAGTTATTCAACTG+AGG | - | chr2.2:26739055-26739074 | None:intergenic | 30.0% |
! | TGGGGATTATTATGATAATG+AGG | + | chr2.2:26738730-26738749 | MS.gene065836:CDS | 30.0% |
AAATAACAAGTCTCATGAGG+AGG | + | chr2.2:26738898-26738917 | MS.gene065836:CDS | 35.0% | |
AACAGGAGCAGAAAAAACTA+AGG | + | chr2.2:26739797-26739816 | MS.gene065836:CDS | 35.0% | |
AAGCAACCTTAGCACATTAA+AGG | + | chr2.2:26739249-26739268 | MS.gene065836:CDS | 35.0% | |
AATTATGGTGACATTGCCAA+CGG | + | chr2.2:26739652-26739671 | MS.gene065836:CDS | 35.0% | |
AATTCCAGATATTGAGTGGT+GGG | + | chr2.2:26739606-26739625 | MS.gene065836:CDS | 35.0% | |
ACTTCGATTTAGATCGATGA+TGG | - | chr2.2:26738574-26738593 | None:intergenic | 35.0% | |
AGAAAAAACTAAGGACCCAA+AGG | + | chr2.2:26739806-26739825 | MS.gene065836:CDS | 35.0% | |
AGATGCCAATAAATGTGTTC+TGG | + | chr2.2:26740320-26740339 | MS.gene065836:CDS | 35.0% | |
AGCAAGTCAATTAAGAGGTA+TGG | + | chr2.2:26740237-26740256 | MS.gene065836:CDS | 35.0% | |
AGTAGTAATCGAAGATACCT+TGG | - | chr2.2:26738870-26738889 | None:intergenic | 35.0% | |
TAGAGAACATAGCTATGATC+GGG | + | chr2.2:26738652-26738671 | MS.gene065836:CDS | 35.0% | |
TGATTGGACTGATGTTTCAA+AGG | + | chr2.2:26740281-26740300 | MS.gene065836:CDS | 35.0% | |
TGTTGACCTTTAATGTGCTA+AGG | - | chr2.2:26739258-26739277 | None:intergenic | 35.0% | |
TTCATCATCTATAGTACCGT+TGG | - | chr2.2:26739671-26739690 | None:intergenic | 35.0% | |
TTTAATGTGCTAAGGTTGCT+TGG | - | chr2.2:26739250-26739269 | None:intergenic | 35.0% | |
! | AATTTTCTGTTTGTGGAGGA+AGG | + | chr2.2:26739406-26739425 | MS.gene065836:CDS | 35.0% |
! | ACCACTCAATATCTGGAATT+GGG | - | chr2.2:26739606-26739625 | None:intergenic | 35.0% |
! | ACTTTTATGTGGAACATCCT+CGG | + | chr2.2:26739716-26739735 | MS.gene065836:CDS | 35.0% |
! | ATTAGTGTTGTTGTGGTTGA+AGG | + | chr2.2:26740210-26740229 | MS.gene065836:CDS | 35.0% |
! | CTTCTGCATTCTGGAAATTA+TGG | + | chr2.2:26739637-26739656 | MS.gene065836:CDS | 35.0% |
! | GAGGATGAATTTTCTGTTTG+TGG | + | chr2.2:26739399-26739418 | MS.gene065836:CDS | 35.0% |
! | GATGAATTTTCTGTTTGTGG+AGG | + | chr2.2:26739402-26739421 | MS.gene065836:CDS | 35.0% |
! | GCAAGTCAATTAAGAGGTAT+GGG | + | chr2.2:26740238-26740257 | MS.gene065836:CDS | 35.0% |
! | TGATGGTATTAGTGTTGTTG+TGG | + | chr2.2:26740203-26740222 | MS.gene065836:CDS | 35.0% |
! | TTATGCGTAGACGTATTGAT+TGG | + | chr2.2:26740265-26740284 | MS.gene065836:CDS | 35.0% |
!! | CCTCATTTTGATGAGAGAAT+GGG | + | chr2.2:26739346-26739365 | MS.gene065836:CDS | 35.0% |
!! | TCCTCATTTTGATGAGAGAA+TGG | + | chr2.2:26739345-26739364 | MS.gene065836:CDS | 35.0% |
AAATCGTTTGACTGGATGTG+CGG | + | chr2.2:26740173-26740192 | MS.gene065836:CDS | 40.0% | |
AAGAAGGAACGTAGGAGATT+TGG | + | chr2.2:26738710-26738729 | MS.gene065836:CDS | 40.0% | |
ACAGGTGTGTCCAATGTATT+TGG | - | chr2.2:26740084-26740103 | None:intergenic | 40.0% | |
ACATAGCTATGATCGGGAAT+TGG | + | chr2.2:26738658-26738677 | MS.gene065836:CDS | 40.0% | |
ACCCAATTCCAGATATTGAG+TGG | + | chr2.2:26739602-26739621 | MS.gene065836:CDS | 40.0% | |
AGAAGGAACGTAGGAGATTT+GGG | + | chr2.2:26738711-26738730 | MS.gene065836:CDS | 40.0% | |
CAATTCCAGATATTGAGTGG+TGG | + | chr2.2:26739605-26739624 | MS.gene065836:CDS | 40.0% | |
CAGGTGTGTCCAATGTATTT+GGG | - | chr2.2:26740083-26740102 | None:intergenic | 40.0% | |
CATAGAACCTCCAAAACCAA+AGG | + | chr2.2:26739876-26739895 | MS.gene065836:CDS | 40.0% | |
CCAATAAATGTGTTCTGGTG+TGG | + | chr2.2:26740325-26740344 | MS.gene065836:CDS | 40.0% | |
CCACACCAGAACACATTTAT+TGG | - | chr2.2:26740328-26740347 | None:intergenic | 40.0% | |
CCCATTCTCTCATCAAAATG+AGG | - | chr2.2:26739349-26739368 | None:intergenic | 40.0% | |
GAACCTATTGAAGCTCGATT+TGG | - | chr2.2:26740364-26740383 | None:intergenic | 40.0% | |
GAATCTACAGCTATGTTTCC+TGG | + | chr2.2:26739106-26739125 | MS.gene065836:CDS | 40.0% | |
GCTCAAGAAAATCGTTTGAC+TGG | + | chr2.2:26740165-26740184 | MS.gene065836:CDS | 40.0% | |
GGACGTGAAATAGATGAACA+TGG | + | chr2.2:26739202-26739221 | MS.gene065836:CDS | 40.0% | |
GTAATCGAAGATACCTTGGT+AGG | - | chr2.2:26738866-26738885 | None:intergenic | 40.0% | |
GTGGAAGCAAGTCAATTAAG+AGG | + | chr2.2:26740232-26740251 | MS.gene065836:CDS | 40.0% | |
TAGGGTTTGTGAAGCAAAGA+AGG | + | chr2.2:26738694-26738713 | MS.gene065836:CDS | 40.0% | |
TAGTAGTGATGCCTTAGCAA+AGG | + | chr2.2:26738973-26738992 | MS.gene065836:CDS | 40.0% | |
TCAGGATTGACATCCAATAC+AGG | - | chr2.2:26739319-26739338 | None:intergenic | 40.0% | |
TCTACAACTGCTGGAAAACT+TGG | + | chr2.2:26738941-26738960 | MS.gene065836:CDS | 40.0% | |
TCTATCTTTCCTCTTATGCG+AGG | - | chr2.2:26738636-26738655 | None:intergenic | 40.0% | |
TGTTTGTGGAGGAAGGAAAA+TGG | + | chr2.2:26739413-26739432 | MS.gene065836:CDS | 40.0% | |
TTCATCTATTTCACGTCCCT+GGG | - | chr2.2:26739200-26739219 | None:intergenic | 40.0% | |
TTGCCAAATCGAGCTTCAAT+AGG | + | chr2.2:26740358-26740377 | MS.gene065836:CDS | 40.0% | |
TTTACCCTGTAAAGTGAGAC+AGG | - | chr2.2:26740102-26740121 | None:intergenic | 40.0% | |
! | ATTTAGATCGATGATGGCAG+TGG | - | chr2.2:26738568-26738587 | None:intergenic | 40.0% |
! | CACCACTCAATATCTGGAAT+TGG | - | chr2.2:26739607-26739626 | None:intergenic | 40.0% |
! | TCACAAGAAAGCACACAGTT+GGG | + | chr2.2:26739073-26739092 | MS.gene065836:CDS | 40.0% |
! | TGATAATGAGGCTAGGGTTA+AGG | + | chr2.2:26738742-26738761 | MS.gene065836:CDS | 40.0% |
! | TGCTCCTGTTTAGTTAGCTT+GGG | - | chr2.2:26739787-26739806 | None:intergenic | 40.0% |
! | TTCACAAGAAAGCACACAGT+TGG | + | chr2.2:26739072-26739091 | MS.gene065836:CDS | 40.0% |
!! | CTCATCTTGACCTTTGGTTT+TGG | - | chr2.2:26739889-26739908 | None:intergenic | 40.0% |
!!! | ATCTTGACCTTTGGTTTTGG+AGG | - | chr2.2:26739886-26739905 | None:intergenic | 40.0% |
AAATGACCTCTCTCATCCCA+AGG | + | chr2.2:26740119-26740138 | MS.gene065836:CDS | 45.0% | |
AAATGTGTTCTGGTGTGGCA+AGG | + | chr2.2:26740330-26740349 | MS.gene065836:CDS | 45.0% | |
AAGACGAAGAACAGGAACCT+TGG | - | chr2.2:26739173-26739192 | None:intergenic | 45.0% | |
AAGTCTCATGAGGAGGATTC+TGG | + | chr2.2:26738905-26738924 | MS.gene065836:CDS | 45.0% | |
AATCGAAGTGCGATGAAGAG+AGG | + | chr2.2:26738585-26738604 | MS.gene065836:CDS | 45.0% | |
ACACACCTGTCTCACTTTAC+AGG | + | chr2.2:26740094-26740113 | MS.gene065836:CDS | 45.0% | |
ACAGCTTGGTCCCAATAATG+AGG | - | chr2.2:26740447-26740466 | None:intergenic | 45.0% | |
ACCTCCCAAGCTAACTAAAC+AGG | + | chr2.2:26739780-26739799 | MS.gene065836:CDS | 45.0% | |
AGCTCAAGCAAAAGAGCTGA+AGG | + | chr2.2:26739480-26739499 | MS.gene065836:CDS | 45.0% | |
ATCGAAGTGCGATGAAGAGA+GGG | + | chr2.2:26738586-26738605 | MS.gene065836:CDS | 45.0% | |
ATGCTGGGGTTCCTCATTAT+TGG | + | chr2.2:26740433-26740452 | MS.gene065836:CDS | 45.0% | |
CAAACAAGCACAGCTAGCAA+AGG | + | chr2.2:26739504-26739523 | MS.gene065836:CDS | 45.0% | |
CACACCTGTCTCACTTTACA+GGG | + | chr2.2:26740095-26740114 | MS.gene065836:CDS | 45.0% | |
CCAAGCTGTCAACTATACAG+AGG | + | chr2.2:26740458-26740477 | MS.gene065836:CDS | 45.0% | |
CCTCTGTATAGTTGACAGCT+TGG | - | chr2.2:26740461-26740480 | None:intergenic | 45.0% | |
CGAAGATACCTTGGTAGGAA+AGG | - | chr2.2:26738861-26738880 | None:intergenic | 45.0% | |
CGACAGGAGATGATTAGACA+GGG | + | chr2.2:26739850-26739869 | MS.gene065836:CDS | 45.0% | |
CTCCTTAGCTATACGCCTTT+GGG | - | chr2.2:26739824-26739843 | None:intergenic | 45.0% | |
CTGCTCCTGTTTAGTTAGCT+TGG | - | chr2.2:26739788-26739807 | None:intergenic | 45.0% | |
CTTAGCAAAGGCTAAGAAGG+CGG | + | chr2.2:26738985-26739004 | MS.gene065836:CDS | 45.0% | |
CTTTGCTAGCTGTGCTTGTT+TGG | - | chr2.2:26739506-26739525 | None:intergenic | 45.0% | |
GAAGGAACGTAGGAGATTTG+GGG | + | chr2.2:26738712-26738731 | MS.gene065836:CDS | 45.0% | |
GATACCTTGGTAGGAAAGGA+AGG | - | chr2.2:26738857-26738876 | None:intergenic | 45.0% | |
GATTATTCACGTGTTGCCGT+GGG | + | chr2.2:26738788-26738807 | MS.gene065836:CDS | 45.0% | |
GTGAAGCAAAGAAGGAACGT+AGG | + | chr2.2:26738702-26738721 | MS.gene065836:CDS | 45.0% | |
GTTCATCTATTTCACGTCCC+TGG | - | chr2.2:26739201-26739220 | None:intergenic | 45.0% | |
TAACGTCTGGTGTAGCAATC+TGG | - | chr2.2:26739132-26739151 | None:intergenic | 45.0% | |
TAATGAGGCTAGGGTTAAGG+AGG | + | chr2.2:26738745-26738764 | MS.gene065836:CDS | 45.0% | |
TATCCCTCAGAAACCAACCA+AGG | + | chr2.2:26739153-26739172 | MS.gene065836:CDS | 45.0% | |
TCGACAAAACAAAGCTCCTG+CGG | + | chr2.2:26739371-26739390 | MS.gene065836:CDS | 45.0% | |
TCTCCTTAGCTATACGCCTT+TGG | - | chr2.2:26739825-26739844 | None:intergenic | 45.0% | |
TGAAGAGAGGGAAGATTCAG+TGG | + | chr2.2:26738598-26738617 | MS.gene065836:CDS | 45.0% | |
TGATTATTCACGTGTTGCCG+TGG | + | chr2.2:26738787-26738806 | MS.gene065836:CDS | 45.0% | |
TGCCTTAGCAAAGGCTAAGA+AGG | + | chr2.2:26738982-26739001 | MS.gene065836:CDS | 45.0% | |
TGCTGGGGTTCCTCATTATT+GGG | + | chr2.2:26740434-26740453 | MS.gene065836:CDS | 45.0% | |
TTCCTCTTATGCGAGGAGTA+TGG | - | chr2.2:26738629-26738648 | None:intergenic | 45.0% | |
! | AGTGTTGTTGTGGTTGAAGG+TGG | + | chr2.2:26740213-26740232 | MS.gene065836:CDS | 45.0% |
! | ATGAGGAGGATTCTGGAGAT+GGG | + | chr2.2:26738912-26738931 | MS.gene065836:CDS | 45.0% |
! | CTAAGGCATCACTACTAGAG+AGG | - | chr2.2:26738970-26738989 | None:intergenic | 45.0% |
! | GTGAAGTGTTTGTGGATGCT+GGG | + | chr2.2:26740418-26740437 | MS.gene065836:CDS | 45.0% |
! | TCCTGTTTAGTTAGCTTGGG+AGG | - | chr2.2:26739784-26739803 | None:intergenic | 45.0% |
! | TGAAGTGTTTGTGGATGCTG+GGG | + | chr2.2:26740419-26740438 | MS.gene065836:CDS | 45.0% |
! | TTAGTTAGCTTGGGAGGTTG+AGG | - | chr2.2:26739778-26739797 | None:intergenic | 45.0% |
! | TTCTGAGGGATAGTAACGTC+TGG | - | chr2.2:26739145-26739164 | None:intergenic | 45.0% |
!! | GAACCTTGGTTGGTTTCTGA+GGG | - | chr2.2:26739159-26739178 | None:intergenic | 45.0% |
!! | TACGTACTTCCTTTTCGAGC+CGG | - | chr2.2:26739957-26739976 | None:intergenic | 45.0% |
!! | TAGTGTGGCTCTGACATCTT+TGG | + | chr2.2:26738823-26738842 | MS.gene065836:CDS | 45.0% |
AACGCGACCGTAACCATCAT+CGG | + | chr2.2:26738522-26738541 | MS.gene065836:CDS | 50.0% | |
AAGCAACTCAAGATCCCACC+CGG | + | chr2.2:26739935-26739954 | MS.gene065836:CDS | 50.0% | |
AATTCATCCTCTTAGGCCGC+AGG | - | chr2.2:26739390-26739409 | None:intergenic | 50.0% | |
ACCTTGGTAGGAAAGGAAGG+AGG | - | chr2.2:26738854-26738873 | None:intergenic | 50.0% | |
ACGTCCCACCACTCAATATC+TGG | - | chr2.2:26739613-26739632 | None:intergenic | 50.0% | |
AGCACAGCTAGCAAAGGCAA+AGG | + | chr2.2:26739510-26739529 | MS.gene065836:CDS | 50.0% | |
AGCTAAGGAGAAAGAGCGAC+AGG | + | chr2.2:26739834-26739853 | MS.gene065836:CDS | 50.0% | |
AGCTGCGTGAGAAGAAGGAA+AGG | + | chr2.2:26740043-26740062 | MS.gene065836:CDS | 50.0% | |
CACCATACTCCTCGCATAAG+AGG | + | chr2.2:26738624-26738643 | MS.gene065836:CDS | 50.0% | |
CGAAGAACAGGAACCTTGGT+TGG | - | chr2.2:26739169-26739188 | None:intergenic | 50.0% | |
GCGACAGGAGATGATTAGAC+AGG | + | chr2.2:26739849-26739868 | MS.gene065836:CDS | 50.0% | |
GGGTCATCATCTACAACTGC+TGG | + | chr2.2:26738932-26738951 | MS.gene065836:CDS | 50.0% | |
GTGAGCAGGCTCACATAGAT+AGG | + | chr2.2:26739992-26740011 | MS.gene065836:CDS | 50.0% | |
TCCTCCTTCCTTTCCTACCA+AGG | + | chr2.2:26738850-26738869 | MS.gene065836:CDS | 50.0% | |
TGGTAGGAAAGGAAGGAGGA+GGG | - | chr2.2:26738850-26738869 | None:intergenic | 50.0% | |
TTGGTAGGAAAGGAAGGAGG+AGG | - | chr2.2:26738851-26738870 | None:intergenic | 50.0% | |
! | AGATATTGAGTGGTGGGACG+TGG | + | chr2.2:26739612-26739631 | MS.gene065836:CDS | 50.0% |
! | AGCTGCTCGTGAAGTGTTTG+TGG | + | chr2.2:26740410-26740429 | MS.gene065836:CDS | 50.0% |
! | CATGAGGAGGATTCTGGAGA+TGG | + | chr2.2:26738911-26738930 | MS.gene065836:CDS | 50.0% |
! | CGCCTTCTTAGCCTTTGCTA+AGG | - | chr2.2:26738987-26739006 | None:intergenic | 50.0% |
! | CGTGAAGTGTTTGTGGATGC+TGG | + | chr2.2:26740417-26740436 | MS.gene065836:CDS | 50.0% |
! | CTCTTATGCGAGGAGTATGG+TGG | - | chr2.2:26738626-26738645 | None:intergenic | 50.0% |
! | GACCCAAAGGCGTATAGCTA+AGG | + | chr2.2:26739819-26739838 | MS.gene065836:CDS | 50.0% |
! | GGATGTGCGGTGATTTGTGA+TGG | + | chr2.2:26740186-26740205 | MS.gene065836:CDS | 50.0% |
! | TCGATGATGGCAGTGGTCAT+CGG | - | chr2.2:26738561-26738580 | None:intergenic | 50.0% |
!! | ACGTACTTCCTTTTCGAGCC+GGG | - | chr2.2:26739956-26739975 | None:intergenic | 50.0% |
!! | ATCAACTCTATAGCGGGCCT+TGG | - | chr2.2:26740139-26740158 | None:intergenic | 50.0% |
!! | GGAACCTTGGTTGGTTTCTG+AGG | - | chr2.2:26739160-26739179 | None:intergenic | 50.0% |
!! | TCAACTCTATAGCGGGCCTT+GGG | - | chr2.2:26740138-26740157 | None:intergenic | 50.0% |
ACTAGCAGCAGGTGATCCCA+CGG | - | chr2.2:26738807-26738826 | None:intergenic | 55.0% | |
AGTGGTCATCGGAATCGTGG+CGG | - | chr2.2:26738550-26738569 | None:intergenic | 55.0% | |
GACGTGGCACTTCTGCATTC+TGG | + | chr2.2:26739628-26739647 | MS.gene065836:CDS | 55.0% | |
GGTAGGAAAGGAAGGAGGAG+GGG | - | chr2.2:26738849-26738868 | None:intergenic | 55.0% | |
GTTCTTCGTCTTGACGCCCA+GGG | + | chr2.2:26739181-26739200 | MS.gene065836:CDS | 55.0% | |
TCTGGTGTAGCAATCTGGCC+AGG | - | chr2.2:26739127-26739146 | None:intergenic | 55.0% | |
TGCTGAGCTGCGTGAGAAGA+AGG | + | chr2.2:26740038-26740057 | MS.gene065836:CDS | 55.0% | |
TGGGCGTCAAGACGAAGAAC+AGG | - | chr2.2:26739181-26739200 | None:intergenic | 55.0% | |
TGTTCTTCGTCTTGACGCCC+AGG | + | chr2.2:26739180-26739199 | MS.gene065836:CDS | 55.0% | |
TTCTTCTCACGCAGCTCAGC+AGG | - | chr2.2:26740039-26740058 | None:intergenic | 55.0% | |
! | GTTAGCTTGGGAGGTTGAGG+TGG | - | chr2.2:26739775-26739794 | None:intergenic | 55.0% |
!! | ACTTCCTTTTCGAGCCGGGT+GGG | - | chr2.2:26739952-26739971 | None:intergenic | 55.0% |
!! | TACTTCCTTTTCGAGCCGGG+TGG | - | chr2.2:26739953-26739972 | None:intergenic | 55.0% |
AATCGTGGCGGCTCCGATGA+TGG | - | chr2.2:26738538-26738557 | None:intergenic | 60.0% | |
AGCTTGGGAGGTTGAGGTGG+TGG | - | chr2.2:26739772-26739791 | None:intergenic | 60.0% | |
CAAAGCTCCTGCGGCCTAAG+AGG | + | chr2.2:26739380-26739399 | MS.gene065836:CDS | 60.0% | |
GGCAGTGGTCATCGGAATCG+TGG | - | chr2.2:26738553-26738572 | None:intergenic | 60.0% | |
GGCTCAGCAGGCGGTTCAAT+AGG | - | chr2.2:26739742-26739761 | None:intergenic | 60.0% | |
GGGATCACCTGCTGCTAGTG+TGG | + | chr2.2:26738808-26738827 | MS.gene065836:CDS | 60.0% | |
GTCAGAGCCACACTAGCAGC+AGG | - | chr2.2:26738818-26738837 | None:intergenic | 60.0% | |
! | AGATCCCACCCGGCTCGAAA+AGG | + | chr2.2:26739945-26739964 | MS.gene065836:CDS | 60.0% |
! | GGCGGCTCCGATGATGGTTA+CGG | - | chr2.2:26738532-26738551 | None:intergenic | 60.0% |
! | TTGGGAGGTTGAGGTGGTGG+AGG | - | chr2.2:26739769-26739788 | None:intergenic | 60.0% |
!! | TGGGAGGTTGAGGTGGTGGA+GGG | - | chr2.2:26739768-26739787 | None:intergenic | 60.0% |
AGCGGGCCTTGGGATGAGAG+AGG | - | chr2.2:26740128-26740147 | None:intergenic | 65.0% | |
GCAGGCGGTTCAATAGGCCG+AGG | - | chr2.2:26739736-26739755 | None:intergenic | 65.0% | |
TGCAGCTGCTGAGCGTGAGC+AGG | + | chr2.2:26739978-26739997 | MS.gene065836:CDS | 65.0% | |
!! | AGGTTGAGGTGGTGGAGGGG+CGG | - | chr2.2:26739764-26739783 | None:intergenic | 65.0% |
!! | GGGAGGTTGAGGTGGTGGAG+GGG | - | chr2.2:26739767-26739786 | None:intergenic | 65.0% |
!! | GGTTGAGGTGGTGGAGGGGC+GGG | - | chr2.2:26739763-26739782 | None:intergenic | 70.0% |
!! | GGAGGGGCGGGCTCAGCAGG+CGG | - | chr2.2:26739751-26739770 | None:intergenic | 80.0% |
!! | GGTGGAGGGGCGGGCTCAGC+AGG | - | chr2.2:26739754-26739773 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 26738509 | 26740494 | 26738509 | ID=MS.gene065836 |
chr2.2 | mRNA | 26738509 | 26740494 | 26738509 | ID=MS.gene065836.t1;Parent=MS.gene065836 |
chr2.2 | exon | 26738509 | 26740494 | 26738509 | ID=MS.gene065836.t1.exon1;Parent=MS.gene065836.t1 |
chr2.2 | CDS | 26738509 | 26740494 | 26738509 | ID=cds.MS.gene065836.t1;Parent=MS.gene065836.t1 |
Gene Sequence |
Protein sequence |