Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029082.t1 | AES63022.2 | 94.3 | 705 | 40 | 0 | 106 | 810 | 130 | 834 | 0.00E+00 | 1230.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029082.t1 | Q9C7E7 | 57.1 | 685 | 258 | 8 | 133 | 807 | 128 | 786 | 3.1e-190 | 666.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029082.t1 | G7IF06 | 94.3 | 705 | 40 | 0 | 106 | 810 | 130 | 834 | 0.0e+00 | 1230.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029082.t1 | MTR_1g115920 | 96.420 | 810 | 28 | 1 | 1 | 810 | 26 | 834 | 0.0 | 1593 |
| MS.gene029082.t1 | MTR_4g094355 | 92.784 | 194 | 11 | 1 | 617 | 810 | 250 | 440 | 7.20e-120 | 369 |
| MS.gene029082.t1 | MTR_4g094355 | 93.785 | 177 | 9 | 1 | 360 | 534 | 75 | 251 | 2.89e-100 | 318 |
| MS.gene029082.t1 | MTR_4g094355 | 86.667 | 45 | 6 | 0 | 78 | 122 | 2 | 46 | 7.97e-15 | 78.2 |
| MS.gene029082.t1 | MTR_4g094355 | 61.538 | 65 | 18 | 1 | 217 | 274 | 45 | 109 | 1.82e-11 | 67.4 |
| MS.gene029082.t1 | MTR_5g039050 | 88.288 | 222 | 18 | 2 | 498 | 719 | 67 | 280 | 4.66e-117 | 361 |
| MS.gene029082.t1 | MTR_5g039050 | 84.444 | 45 | 6 | 1 | 360 | 403 | 6 | 50 | 1.47e-14 | 77.0 |
| MS.gene029082.t1 | MTR_5g039100 | 70.536 | 224 | 31 | 2 | 18 | 241 | 6 | 194 | 3.99e-90 | 282 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029082.t1 | AT1G28060 | 56.533 | 796 | 281 | 15 | 28 | 807 | 40 | 786 | 0.0 | 775 |
| MS.gene029082.t1 | AT1G28060 | 56.533 | 796 | 281 | 15 | 28 | 807 | 40 | 786 | 0.0 | 775 |
| MS.gene029082.t1 | AT1G28060 | 56.533 | 796 | 281 | 15 | 28 | 807 | 40 | 786 | 0.0 | 775 |
| MS.gene029082.t1 | AT3G55930 | 62.637 | 273 | 95 | 3 | 534 | 804 | 3 | 270 | 5.72e-102 | 316 |
| MS.gene029082.t1 | AT3G56790 | 45.536 | 112 | 55 | 2 | 518 | 623 | 92 | 203 | 7.52e-12 | 65.9 |
Find 222 sgRNAs with CRISPR-Local
Find 515 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACACCAGAACACATTTAT+TGG | 0.132544 | 1.3:+78984111 | None:intergenic |
| TGCCTCATGCAGAGTAAATT+TGG | 0.191514 | 1.3:-78987426 | MS.gene029082:intron |
| TCTCCTTAGCTATACGCTTT+TGG | 0.192141 | 1.3:+78984632 | None:intergenic |
| TACTACCACAAATGAAAATA+AGG | 0.214775 | 1.3:-78988589 | MS.gene029082:CDS |
| CAATGAATCATTGTTGTCTT+TGG | 0.231745 | 1.3:+78989239 | None:intergenic |
| TGCTGGGGTTCCTCATTATT+GGG | 0.233213 | 1.3:-78984002 | MS.gene029082:CDS |
| AATTGGATGATAAGAGAATT+AGG | 0.237950 | 1.3:-78989371 | MS.gene029082:CDS |
| ATGCTGGGGTTCCTCATTAT+TGG | 0.242299 | 1.3:-78984003 | MS.gene029082:CDS |
| CCCTGTCTCTGCTTCCTTCT+CGG | 0.249774 | 1.3:+78989532 | None:intergenic |
| CTTCTGCATTCTGGAAATTA+TGG | 0.253483 | 1.3:-78984814 | MS.gene029082:CDS |
| ACACACTTGTCTCACTTTAC+AGG | 0.257138 | 1.3:-78984360 | MS.gene029082:CDS |
| ACAAGTGTGTCCAATGTATT+TGG | 0.267435 | 1.3:+78984373 | None:intergenic |
| AGAAGGAACGTAGGAGATTT+GGG | 0.277133 | 1.3:-78989335 | MS.gene029082:CDS |
| CTCATCTTGACCTTTGGTTT+TGG | 0.279974 | 1.3:+78984568 | None:intergenic |
| AAGAAGGAACGTAGGAGATT+TGG | 0.280438 | 1.3:-78989336 | MS.gene029082:CDS |
| CTTTGCTAGCTGTGCTTGTT+TGG | 0.291419 | 1.3:+78987377 | None:intergenic |
| ACCTCTCAAGCTAACTAAAA+AGG | 0.293051 | 1.3:-78984674 | MS.gene029082:CDS |
| CTCGGTCTTCTCTGTGATTC+CGG | 0.301582 | 1.3:+78989550 | None:intergenic |
| ATTAAGTTCGGATTGATATC+AGG | 0.315138 | 1.3:+78987342 | None:intergenic |
| ACTTACCACCACTCAATATC+TGG | 0.318366 | 1.3:+78987270 | None:intergenic |
| CACCACTCAATATCTGGAAT+TGG | 0.324849 | 1.3:+78987276 | None:intergenic |
| GACGTGGCACTTCTGCATTC+TGG | 0.325916 | 1.3:-78984823 | MS.gene029082:CDS |
| AAGTAACCTTAGCACATTAA+AGG | 0.326015 | 1.3:-78987828 | MS.gene029082:intron |
| ATCAACTCTAAAGCGGGCCT+TGG | 0.332933 | 1.3:+78984318 | None:intergenic |
| AGATGAAGGCAATCTTAAAA+TGG | 0.335054 | 1.3:-78984770 | MS.gene029082:CDS |
| AACAGCTCTCATGAGGATTC+TGG | 0.336110 | 1.3:-78988555 | MS.gene029082:CDS |
| GTTCATCTATTTCACGTCCC+TGG | 0.343803 | 1.3:+78987879 | None:intergenic |
| CCTGCCACCTCAGCTTCTTC+AGG | 0.351954 | 1.3:-78988154 | MS.gene029082:CDS |
| GGTTGAGGTGGTGGAGGGGC+AGG | 0.353286 | 1.3:+78984694 | None:intergenic |
| GCCAGTGGCACTGGTGCTCC+TGG | 0.353805 | 1.3:-78988082 | MS.gene029082:CDS |
| TGAAATACTAAAACCTGTAT+TGG | 0.355353 | 1.3:-78987685 | MS.gene029082:CDS |
| CTCTTATGCGAGGAGTATCT+TGG | 0.356963 | 1.3:+78989423 | None:intergenic |
| ATTGGATGATAAGAGAATTA+GGG | 0.360540 | 1.3:-78989370 | MS.gene029082:CDS |
| GAACCTATTGAAGCTCGATT+TGG | 0.361063 | 1.3:+78984075 | None:intergenic |
| TGTACTTTCTTCTGAATTTG+AGG | 0.379576 | 1.3:+78988237 | None:intergenic |
| AGCTTCAAAGTTGGTTGCAT+TGG | 0.380123 | 1.3:+78988054 | None:intergenic |
| AAATTACTCATCTTGACCTT+TGG | 0.381357 | 1.3:+78984562 | None:intergenic |
| GGTGGAGGGGCAGGCTCAGC+AGG | 0.382361 | 1.3:+78984703 | None:intergenic |
| CCAGGAAACATATTTATTAG+AGG | 0.384776 | 1.3:+78987971 | None:intergenic |
| AGCTTGAGAGGTTGAGGTGG+TGG | 0.385964 | 1.3:+78984685 | None:intergenic |
| TGTTTGTGGAGGAAGGAAAA+TGG | 0.392737 | 1.3:-78987575 | MS.gene029082:CDS |
| TCTGTAATTTCTATTAAGTT+CGG | 0.393587 | 1.3:+78987330 | None:intergenic |
| TGATAATGAGGCCAGGGTTA+AGG | 0.395447 | 1.3:-78989283 | MS.gene029082:CDS |
| TTTAATGTGCTAAGGTTACT+TGG | 0.396566 | 1.3:+78987830 | None:intergenic |
| TCTACAACTGCTGGAAAACT+TGG | 0.400509 | 1.3:-78988510 | MS.gene029082:CDS |
| TCCTCCTTCCTTTCCTATCA+AGG | 0.400709 | 1.3:-78988622 | MS.gene029082:CDS |
| TTGAGAGGTTGAGGTGGTGG+AGG | 0.402450 | 1.3:+78984688 | None:intergenic |
| GCCGGCCAATAAATGTGTTC+TGG | 0.403741 | 1.3:-78984116 | MS.gene029082:CDS |
| AGCAAGTCAATTAAGAGGTA+TGG | 0.404160 | 1.3:-78984217 | MS.gene029082:CDS |
| TTCTTCTCACGCAGCTCAGC+AGG | 0.405655 | 1.3:+78984418 | None:intergenic |
| TTGCCAAATCGAGCTTCAAT+AGG | 0.406342 | 1.3:-78984078 | MS.gene029082:CDS |
| TCAAAATGAGGATTAGATTC+AGG | 0.407433 | 1.3:+78987654 | None:intergenic |
| GGCTCAGCAGGCGGTTCAAT+AGG | 0.408739 | 1.3:+78984715 | None:intergenic |
| ACATAGCGAGGATCGGGAAT+TGG | 0.409452 | 1.3:-78989388 | MS.gene029082:CDS |
| TGCAGCTGCTGAGCGTGAGC+AGG | 0.412035 | 1.3:-78984476 | MS.gene029082:CDS |
| TCGATCTCTGTTTCGCCTAT+CGG | 0.413474 | 1.3:+78989650 | None:intergenic |
| ACCGAGAAGGAAGCAGAGAC+AGG | 0.414870 | 1.3:-78989533 | MS.gene029082:CDS |
| TTCATCTATTTCACGTCCCT+GGG | 0.414957 | 1.3:+78987880 | None:intergenic |
| TGCTGAATCAATAAAATTGA+AGG | 0.422601 | 1.3:-78987544 | MS.gene029082:intron |
| CCTCTAATAAATATGTTTCC+TGG | 0.427265 | 1.3:-78987971 | MS.gene029082:CDS |
| TCAGAAGAAAGTACACAGTT+TGG | 0.427302 | 1.3:-78988229 | MS.gene029082:CDS |
| CAGGAGCTTGCTGCCAGGAT+GGG | 0.427734 | 1.3:-78988019 | MS.gene029082:CDS |
| CAAGATACTCCTCGCATAAG+AGG | 0.431589 | 1.3:-78989422 | MS.gene029082:CDS |
| CAAAGCTCCTGCGGCCTAAG+AGG | 0.436122 | 1.3:-78987608 | MS.gene029082:CDS |
| TAACGTCTGGTGTAGCAATC+TGG | 0.436715 | 1.3:+78987948 | None:intergenic |
| GCTACGGTCGCGGTCACGTT+CGG | 0.436891 | 1.3:+78989623 | None:intergenic |
| TCAGGAGCTTGCTGCCAGGA+TGG | 0.439505 | 1.3:-78988020 | MS.gene029082:CDS |
| TGTTCTTCGTCTTGACGCCC+AGG | 0.441585 | 1.3:-78987897 | MS.gene029082:CDS |
| TTATGCTTAGGCGTATCAAT+TGG | 0.445510 | 1.3:-78984189 | MS.gene029082:CDS |
| CATCAGAATCGTGGCGGCTC+CGG | 0.447371 | 1.3:+78989595 | None:intergenic |
| AACAGAAAATTCATCCTCTT+AGG | 0.449563 | 1.3:+78987594 | None:intergenic |
| TAGAGAACATAGCGAGGATC+GGG | 0.453467 | 1.3:-78989394 | MS.gene029082:CDS |
| AGTAATTTACATAAGGTACT+AGG | 0.456676 | 1.3:-78984547 | MS.gene029082:CDS |
| AATCGTGGCGGCTCCGGTGA+TGG | 0.459978 | 1.3:+78989601 | None:intergenic |
| GCGACAGGAGCTGATTAGAC+AGG | 0.461212 | 1.3:-78984605 | MS.gene029082:CDS |
| TGAAGCTGTCAGACGTGCTC+AGG | 0.465608 | 1.3:-78988038 | MS.gene029082:CDS |
| TGCTGTGGTGCCTGCTAGTG+TGG | 0.467097 | 1.3:-78988664 | MS.gene029082:CDS |
| TCCGGTGATGGCTACGGTCG+CGG | 0.467330 | 1.3:+78989613 | None:intergenic |
| TAGGGTTTCTGAAGCGAAGA+AGG | 0.468422 | 1.3:-78989352 | MS.gene029082:CDS |
| TTAGTTAGCTTGAGAGGTTG+AGG | 0.468472 | 1.3:+78984679 | None:intergenic |
| ATTAGCGTTGTTGTGGTTGA+AGG | 0.468898 | 1.3:-78984244 | MS.gene029082:CDS |
| GCTCAAGAAAACCGTTTGAC+TGG | 0.469577 | 1.3:-78984289 | MS.gene029082:CDS |
| GATGGATCATCTACAACTGC+TGG | 0.469655 | 1.3:-78988519 | MS.gene029082:CDS |
| TGCTGAGCTGCGTGAGAAGA+AGG | 0.474449 | 1.3:-78984416 | MS.gene029082:CDS |
| AGATCCCACCCGGCTTGAAA+AGG | 0.474598 | 1.3:-78984509 | MS.gene029082:CDS |
| ACCAGGAGCACCAGTGCCAC+TGG | 0.474959 | 1.3:+78988081 | None:intergenic |
| GGAGCACCAGTGCCACTGGC+TGG | 0.478750 | 1.3:+78988085 | None:intergenic |
| GATGTCACAGCCACACTAGC+AGG | 0.479557 | 1.3:+78988654 | None:intergenic |
| AAAAGGAGCATAAGAAACTA+AGG | 0.481402 | 1.3:-78984657 | MS.gene029082:CDS |
| ACTACCACAAATGAAAATAA+GGG | 0.482926 | 1.3:-78988588 | MS.gene029082:CDS |
| ACCACTCAATATCTGGAATT+GGG | 0.483308 | 1.3:+78987277 | None:intergenic |
| CACACTTGTCTCACTTTACA+GGG | 0.483911 | 1.3:-78984359 | MS.gene029082:CDS |
| ACAGTGCCCTCTCTTAGTGC+TGG | 0.485201 | 1.3:-78988190 | MS.gene029082:CDS |
| GTGAGCAGGCTCACATAGAT+AGG | 0.485650 | 1.3:-78984462 | MS.gene029082:CDS |
| GTAATCGAAGATACCTTGAT+AGG | 0.492242 | 1.3:+78988609 | None:intergenic |
| AAAATTGACATATTTGCAGC+AGG | 0.493671 | 1.3:+78988130 | None:intergenic |
| CAAGATGAGTAATTTACATA+AGG | 0.497213 | 1.3:-78984554 | MS.gene029082:CDS |
| ACCAGAACACATTTATTGGC+CGG | 0.498365 | 1.3:+78984115 | None:intergenic |
| AATCCTCCAGCCAGTGGCAC+TGG | 0.498599 | 1.3:-78988091 | MS.gene029082:CDS |
| TACTCACCTTTAATGTGCTA+AGG | 0.500336 | 1.3:+78987822 | None:intergenic |
| TGGGCGTCAAGACGAAGAAC+AGG | 0.500740 | 1.3:+78987899 | None:intergenic |
| TCAGGATCGACATCCAATAC+AGG | 0.501479 | 1.3:+78987672 | None:intergenic |
| GGAGCCTTGGTTGGTTTCTG+AGG | 0.503520 | 1.3:+78987920 | None:intergenic |
| AGCTAAGGAGAAAGAGCGAC+AGG | 0.504282 | 1.3:-78984620 | MS.gene029082:CDS |
| ATCATGGCGGAATCCCATCC+TGG | 0.504457 | 1.3:+78988006 | None:intergenic |
| TCAACTCTAAAGCGGGCCTT+GGG | 0.504713 | 1.3:+78984319 | None:intergenic |
| GAGGAGCAAATTGTGGATCA+TGG | 0.506301 | 1.3:+78987990 | None:intergenic |
| GTTAAGGAGGAAGTTACTAA+TGG | 0.507245 | 1.3:-78989267 | MS.gene029082:CDS |
| TGCCTTAGCAAAGGCTAAGA+AGG | 0.507867 | 1.3:-78988469 | MS.gene029082:CDS |
| CCTGAAGAAGCTGAGGTGGC+AGG | 0.508974 | 1.3:+78988154 | None:intergenic |
| GCCTTCATCTATAGTACCGT+TGG | 0.510107 | 1.3:+78984783 | None:intergenic |
| TGAGAGGTTGAGGTGGTGGA+GGG | 0.511983 | 1.3:+78984689 | None:intergenic |
| GCAAGTCAATTAAGAGGTAT+GGG | 0.512247 | 1.3:-78984216 | MS.gene029082:CDS |
| GTGCTCAGGAGCTTGCTGCC+AGG | 0.513129 | 1.3:-78988024 | MS.gene029082:CDS |
| CAAGTGTGTCCAATGTATTT+GGG | 0.514012 | 1.3:+78984374 | None:intergenic |
| ATTATTATGATAATGAGGCC+AGG | 0.515428 | 1.3:-78989290 | MS.gene029082:CDS |
| CGAAGAACAGGAGCCTTGGT+TGG | 0.517067 | 1.3:+78987911 | None:intergenic |
| CCTCAGTATAGTTGACAGCT+TGG | 0.520608 | 1.3:+78983978 | None:intergenic |
| GCTGTTTCAGGGCGTTGCCG+TGG | 0.520851 | 1.3:-78988694 | MS.gene029082:intron |
| TTTATTAGAGGAGCAAATTG+TGG | 0.521484 | 1.3:+78987983 | None:intergenic |
| GTGGAAGCAAGTCAATTAAG+AGG | 0.522404 | 1.3:-78984222 | MS.gene029082:CDS |
| GGAGGATTTACAACAGCAGC+AGG | 0.525427 | 1.3:+78988106 | None:intergenic |
| AGGAAGCAGAGACAGGGAGA+GGG | 0.526886 | 1.3:-78989526 | MS.gene029082:CDS |
| GGCGGCTCCGGTGATGGCTA+CGG | 0.528950 | 1.3:+78989607 | None:intergenic |
| TTGGTTGCATTGGCGACACC+AGG | 0.530093 | 1.3:+78988064 | None:intergenic |
| CTGTTTCAGGGCGTTGCCGT+GGG | 0.530691 | 1.3:-78988693 | MS.gene029082:intron |
| AAGGAAGCAGAGACAGGGAG+AGG | 0.530922 | 1.3:-78989527 | MS.gene029082:CDS |
| GAGCCTTGGTTGGTTTCTGA+GGG | 0.531813 | 1.3:+78987921 | None:intergenic |
| GGAAGCAGAGACAGGGAGAG+GGG | 0.532735 | 1.3:-78989525 | MS.gene029082:CDS |
| TTCTGAGGGATAGTAACGTC+TGG | 0.532884 | 1.3:+78987935 | None:intergenic |
| AGCTCAAGCAAAAGAGCAGA+AGG | 0.535132 | 1.3:-78987400 | MS.gene029082:CDS |
| CCGAGAAGGAAGCAGAGACA+GGG | 0.539039 | 1.3:-78989532 | MS.gene029082:CDS |
| TTTCGATGACCCAAATACAT+TGG | 0.539572 | 1.3:-78984383 | MS.gene029082:CDS |
| TCTGGAAAATCTAGTACAGA+TGG | 0.540285 | 1.3:-78988537 | MS.gene029082:CDS |
| ATCGAAGCGCGATGAAGAGA+GGG | 0.541984 | 1.3:-78989460 | MS.gene029082:CDS |
| CGAAGATACCTTGATAGGAA+AGG | 0.543016 | 1.3:+78988614 | None:intergenic |
| GTTAGCTTGAGAGGTTGAGG+TGG | 0.545509 | 1.3:+78984682 | None:intergenic |
| GCCCTCTCTTAGTGCTGGAG+TGG | 0.546210 | 1.3:-78988185 | MS.gene029082:CDS |
| AGCTGCGTGAGAAGAAGGAA+AGG | 0.547194 | 1.3:-78984411 | MS.gene029082:CDS |
| ATAGAGAACATAGCGAGGAT+CGG | 0.548369 | 1.3:-78989395 | MS.gene029082:CDS |
| CCCATTCTCTCATCAAAATG+AGG | 0.549338 | 1.3:+78987642 | None:intergenic |
| GGTATGGGAAACTTATGCTT+AGG | 0.550753 | 1.3:-78984201 | MS.gene029082:CDS |
| ATAGGAAAGGAAGGAGGAGG+TGG | 0.551217 | 1.3:+78988627 | None:intergenic |
| AATCGAAGCGCGATGAAGAG+AGG | 0.554231 | 1.3:-78989461 | MS.gene029082:CDS |
| GAGAGGTTGAGGTGGTGGAG+GGG | 0.555080 | 1.3:+78984690 | None:intergenic |
| CAAACAAGCACAGCTAGCAA+AGG | 0.555686 | 1.3:-78987376 | MS.gene029082:CDS |
| AAGACGAAGAACAGGAGCCT+TGG | 0.557281 | 1.3:+78987907 | None:intergenic |
| ACCGCGACCGTAGCCATCAC+CGG | 0.559344 | 1.3:-78989614 | MS.gene029082:CDS |
| TCACCGCACATCCAGTCAAA+CGG | 0.560006 | 1.3:+78984278 | None:intergenic |
| ATTAACATCAACTCTAAAGC+GGG | 0.562029 | 1.3:+78984312 | None:intergenic |
| GTTCTTCGTCTTGACGCCCA+GGG | 0.562372 | 1.3:-78987896 | MS.gene029082:CDS |
| TGATGGTATTAGCGTTGTTG+TGG | 0.562974 | 1.3:-78984251 | MS.gene029082:CDS |
| GACCCAAAAGCGTATAGCTA+AGG | 0.563409 | 1.3:-78984635 | MS.gene029082:CDS |
| ACACTAGCAGGCACCACAGC+AGG | 0.563417 | 1.3:+78988666 | None:intergenic |
| AATTCATCCTCTTAGGCCGC+AGG | 0.563858 | 1.3:+78987601 | None:intergenic |
| TCTGGTGTAGCAATCTGGCC+AGG | 0.566957 | 1.3:+78987953 | None:intergenic |
| GACGAAAGAGAGGGTAGCAA+AGG | 0.567020 | 1.3:-78989492 | MS.gene029082:CDS |
| ACCAACGGTACTATAGATGA+AGG | 0.569914 | 1.3:-78984784 | MS.gene029082:CDS |
| AGACGATTATTATGATAATG+AGG | 0.570457 | 1.3:-78989295 | MS.gene029082:CDS |
| AGGACCTGAAGAAGCTGAGG+TGG | 0.576116 | 1.3:+78988150 | None:intergenic |
| TTATTATGATAATGAGGCCA+GGG | 0.581357 | 1.3:-78989289 | MS.gene029082:CDS |
| GTAATTTACATAAGGTACTA+GGG | 0.581923 | 1.3:-78984546 | MS.gene029082:CDS |
| AGCCTTCTTAGCCTTTGCTA+AGG | 0.581971 | 1.3:+78988467 | None:intergenic |
| GGTCAGATCGATGATGGCGG+TGG | 0.582301 | 1.3:+78989571 | None:intergenic |
| AGCGTTGTTGTGGTTGAAGG+TGG | 0.582371 | 1.3:-78984241 | MS.gene029082:CDS |
| ACGTCTGACAGCTTCAAAGT+TGG | 0.584985 | 1.3:+78988045 | None:intergenic |
| CTAAGGCATCACTACTAGAG+AGG | 0.588190 | 1.3:+78988484 | None:intergenic |
| GAAGCTGAAGAAAATTCCTC+AGG | 0.588505 | 1.3:-78988418 | MS.gene029082:intron |
| GATTCCGGTCAGATCGATGA+TGG | 0.589596 | 1.3:+78989565 | None:intergenic |
| GATACCTTGATAGGAAAGGA+AGG | 0.591174 | 1.3:+78988618 | None:intergenic |
| AGATTCAGACGATGACAAGC+CGG | 0.594289 | 1.3:-78984134 | MS.gene029082:CDS |
| GGAGGGGCAGGCTCAGCAGG+CGG | 0.594324 | 1.3:+78984706 | None:intergenic |
| TAGTATTAACAGCTCTCATG+AGG | 0.594654 | 1.3:-78988562 | MS.gene029082:CDS |
| AAAGAGAGGGTAGCAAAGGT+AGG | 0.594676 | 1.3:-78989488 | MS.gene029082:CDS |
| GCACCAGTGCCACTGGCTGG+AGG | 0.597781 | 1.3:+78988088 | None:intergenic |
| CACCACAGCAGGTGATCCCA+CGG | 0.598270 | 1.3:+78988677 | None:intergenic |
| GCTTAGGCGTATCAATTGGA+CGG | 0.603320 | 1.3:-78984185 | MS.gene029082:CDS |
| TCTATCTTTCCTCTTATGCG+AGG | 0.606208 | 1.3:+78989413 | None:intergenic |
| GGCGGTGGTCATCAGAATCG+TGG | 0.608862 | 1.3:+78989586 | None:intergenic |
| ACCGCCATCATCGATCTGAC+CGG | 0.610844 | 1.3:-78989569 | MS.gene029082:CDS |
| TGCCGTGGGATCACCTGCTG+TGG | 0.611626 | 1.3:-78988679 | MS.gene029082:CDS |
| CGACAGGAGCTGATTAGACA+GGG | 0.614849 | 1.3:-78984604 | MS.gene029082:CDS |
| TTGATAGGAAAGGAAGGAGG+AGG | 0.615996 | 1.3:+78988624 | None:intergenic |
| AAATGACCTCTCTCATCCCA+AGG | 0.616566 | 1.3:-78984335 | MS.gene029082:CDS |
| AGTAACTTCCTCCTTAACCC+TGG | 0.616657 | 1.3:+78989272 | None:intergenic |
| GGATGTGCGGTGATTTGTGA+TGG | 0.616908 | 1.3:-78984268 | MS.gene029082:CDS |
| TGTAATGAAAGCAAAACTGA+AGG | 0.617069 | 1.3:-78987301 | MS.gene029082:CDS |
| ACAGCTTGGTCCCAATAATG+AGG | 0.617442 | 1.3:+78983992 | None:intergenic |
| TAGTAGTGATGCCTTAGCAA+AGG | 0.620911 | 1.3:-78988478 | MS.gene029082:CDS |
| CATAGAACCGCCAAAACCAA+AGG | 0.624392 | 1.3:-78984578 | MS.gene029082:CDS |
| ATACGATAGAGACGAAAGAG+AGG | 0.625770 | 1.3:-78989502 | MS.gene029082:CDS |
| AGCACAGCTAGCAAAGGCAA+AGG | 0.626359 | 1.3:-78987370 | MS.gene029082:CDS |
| GCAGGCGGTTCAATAGGCCG+AGG | 0.628346 | 1.3:+78984721 | None:intergenic |
| TAATGAGGCCAGGGTTAAGG+AGG | 0.630593 | 1.3:-78989280 | MS.gene029082:CDS |
| TGCCACTCCAGCACTAAGAG+AGG | 0.632266 | 1.3:+78988183 | None:intergenic |
| AGCAGGACCTGAAGAAGCTG+AGG | 0.633784 | 1.3:+78988147 | None:intergenic |
| GTTGTAAATCCTCCAGCCAG+TGG | 0.634542 | 1.3:-78988097 | MS.gene029082:CDS |
| GCCACTCCAGCACTAAGAGA+GGG | 0.644669 | 1.3:+78988184 | None:intergenic |
| ACCCAATTCCAGATATTGAG+TGG | 0.645164 | 1.3:-78987278 | MS.gene029082:CDS |
| TGAAGAGAGGGAAGATTCAG+CGG | 0.646031 | 1.3:-78989448 | MS.gene029082:CDS |
| AGCGGGCCTTGGGATGAGAG+AGG | 0.647591 | 1.3:+78984329 | None:intergenic |
| CCAATAAATGTGTTCTGGTG+TGG | 0.648398 | 1.3:-78984111 | MS.gene029082:CDS |
| GAAAGATAGAGAACATAGCG+AGG | 0.651265 | 1.3:-78989400 | MS.gene029082:CDS |
| CTGAAGCGAAGAAGGAACGT+AGG | 0.651432 | 1.3:-78989344 | MS.gene029082:CDS |
| AATTATGGTGACATTACCAA+CGG | 0.654556 | 1.3:-78984799 | MS.gene029082:CDS |
| GGACGTGAAATAGATGAACA+TGG | 0.655823 | 1.3:-78987875 | MS.gene029082:CDS |
| AAATGTGTTCTGGTGTGGCA+AGG | 0.657323 | 1.3:-78984106 | MS.gene029082:CDS |
| TACGATAGAGACGAAAGAGA+GGG | 0.657871 | 1.3:-78989501 | MS.gene029082:CDS |
| ACCTTGATAGGAAAGGAAGG+AGG | 0.662265 | 1.3:+78988621 | None:intergenic |
| CATTAACATCAACTCTAAAG+CGG | 0.666533 | 1.3:+78984311 | None:intergenic |
| ACGAGAGAGACAAATCCGAT+AGG | 0.669354 | 1.3:-78989665 | MS.gene029082:CDS |
| AATCACAGAGAAGACCGAGA+AGG | 0.670001 | 1.3:-78989546 | MS.gene029082:CDS |
| CAATTCCAGATATTGAGTGG+TGG | 0.676443 | 1.3:-78987275 | MS.gene029082:intron |
| GAAGGAACGTAGGAGATTTG+GGG | 0.681742 | 1.3:-78989334 | MS.gene029082:CDS |
| TCGACAAAACAAAGCTCCTG+CGG | 0.696622 | 1.3:-78987617 | MS.gene029082:CDS |
| TCCGGTCAGATCGATGATGG+CGG | 0.696675 | 1.3:+78989568 | None:intergenic |
| AAGCAACTCAAGATCCCACC+CGG | 0.703568 | 1.3:-78984519 | MS.gene029082:CDS |
| AAACCGTTTGACTGGATGTG+CGG | 0.703995 | 1.3:-78984281 | MS.gene029082:CDS |
| CCAAGCTGTCAACTATACTG+AGG | 0.711460 | 1.3:-78983978 | MS.gene029082:CDS |
| GGTGGTCATCAGAATCGTGG+CGG | 0.717210 | 1.3:+78989589 | None:intergenic |
| TATCCCTCAGAAACCAACCA+AGG | 0.732982 | 1.3:-78987924 | MS.gene029082:CDS |
| GAGCAAATTGTGGATCATGG+CGG | 0.762331 | 1.3:+78987993 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTTAATAGATTTATAAA+AGG | + | chr1.3:78988776-78988795 | None:intergenic | 10.0% |
| !! | AAGTTAATAGATTTATAAAA+GGG | + | chr1.3:78988775-78988794 | None:intergenic | 10.0% |
| !!! | ACACTTTTTTAATAATAATT+GGG | - | chr1.3:78987582-78987601 | MS.gene029082:CDS | 10.0% |
| !!! | TCATTTTCTTAAATTATTAT+TGG | - | chr1.3:78984747-78984766 | MS.gene029082:CDS | 10.0% |
| !!! | TTTATAAATCTATTAACTTT+TGG | - | chr1.3:78988776-78988795 | MS.gene029082:intron | 10.0% |
| !! | AATTTAATGGAAAATATTGT+GGG | + | chr1.3:78987550-78987569 | None:intergenic | 15.0% |
| !! | GTTAAATTAACTTAATCATA+TGG | + | chr1.3:78987305-78987324 | None:intergenic | 15.0% |
| !! | TAATTTAATGGAAAATATTG+TGG | + | chr1.3:78987551-78987570 | None:intergenic | 15.0% |
| !! | TTATAAAACATAAACAAACA+AGG | + | chr1.3:78988465-78988484 | None:intergenic | 15.0% |
| !!! | CACACTTTTTTAATAATAAT+TGG | - | chr1.3:78987581-78987600 | MS.gene029082:CDS | 15.0% |
| !!! | GTTTGTTTATGTTTTATAAA+GGG | - | chr1.3:78988466-78988485 | MS.gene029082:CDS | 15.0% |
| !!! | TAAATCATGTATAGTATTTT+AGG | - | chr1.3:78988295-78988314 | MS.gene029082:intron | 15.0% |
| !!! | TGTTTGTTTATGTTTTATAA+AGG | - | chr1.3:78988465-78988484 | MS.gene029082:CDS | 15.0% |
| !!! | TTTTATTAATAGTACCTAAT+AGG | + | chr1.3:78986513-78986532 | None:intergenic | 15.0% |
| !! | AAATATACTTTACATACACT+GGG | + | chr1.3:78988136-78988155 | None:intergenic | 20.0% |
| !! | AAATTATAAATTAGTACACG+TGG | - | chr1.3:78987718-78987737 | MS.gene029082:CDS | 20.0% |
| !! | AAGAAAATGACAAAATTGAA+TGG | + | chr1.3:78984737-78984756 | None:intergenic | 20.0% |
| !! | AATAAACAATATGACATGAA+CGG | - | chr1.3:78988354-78988373 | MS.gene029082:intron | 20.0% |
| !! | AATTATAAATTAGTACACGT+GGG | - | chr1.3:78987719-78987738 | MS.gene029082:CDS | 20.0% |
| !! | ATGAAATAAAACCAAGATAA+AGG | + | chr1.3:78984442-78984461 | None:intergenic | 20.0% |
| !! | TAAATATACTTTACATACAC+TGG | + | chr1.3:78988137-78988156 | None:intergenic | 20.0% |
| !! | TAACACCAAGTAAATTAAAT+TGG | + | chr1.3:78984841-78984860 | None:intergenic | 20.0% |
| !! | TCTGTAATTTCTATTAAGTT+CGG | + | chr1.3:78986306-78986325 | None:intergenic | 20.0% |
| !! | TGCAAGAATGATTAATTTAA+TGG | + | chr1.3:78987563-78987582 | None:intergenic | 20.0% |
| !!! | GAAAACTTGTTTTGATTAAA+GGG | - | chr1.3:78988016-78988035 | MS.gene029082:CDS | 20.0% |
| !!! | TCTATCCAATTTAATTTACT+TGG | - | chr1.3:78984833-78984852 | MS.gene029082:intron | 20.0% |
| !!! | TCTCATGTATTATTTGTTTT+GGG | - | chr1.3:78984875-78984894 | MS.gene029082:intron | 20.0% |
| !!! | TGAAAACTTGTTTTGATTAA+AGG | - | chr1.3:78988015-78988034 | MS.gene029082:CDS | 20.0% |
| !!! | TTCTCATGTATTATTTGTTT+TGG | - | chr1.3:78984874-78984893 | MS.gene029082:intron | 20.0% |
| ! | AAAACATAAACAAACAAGGA+GGG | + | chr1.3:78988461-78988480 | None:intergenic | 25.0% |
| ! | AACAATAAACAATTTACCTG+AGG | + | chr1.3:78985234-78985253 | None:intergenic | 25.0% |
| ! | AACTGTTTACTGAATTTGAA+TGG | - | chr1.3:78984592-78984611 | MS.gene029082:CDS | 25.0% |
| ! | AAGAAATTTGTGTGCTTATT+AGG | - | chr1.3:78987682-78987701 | MS.gene029082:CDS | 25.0% |
| ! | AAGCACACAAATTTCTTAAA+TGG | + | chr1.3:78987679-78987698 | None:intergenic | 25.0% |
| ! | AATGAAGTGATTGTATTAAG+AGG | + | chr1.3:78987948-78987967 | None:intergenic | 25.0% |
| ! | AATTGGATGATAAGAGAATT+AGG | - | chr1.3:78984262-78984281 | MS.gene029082:CDS | 25.0% |
| ! | ACTACCACAAATGAAAATAA+GGG | - | chr1.3:78985045-78985064 | MS.gene029082:intron | 25.0% |
| ! | ACTGTTTACTGAATTTGAAT+GGG | - | chr1.3:78984593-78984612 | MS.gene029082:CDS | 25.0% |
| ! | AGAATATCACTTCAAATTGT+AGG | - | chr1.3:78984542-78984561 | MS.gene029082:CDS | 25.0% |
| ! | AGCACACAAATTTCTTAAAT+GGG | + | chr1.3:78987678-78987697 | None:intergenic | 25.0% |
| ! | ATTGGAAAGAAATAAGTCAA+AGG | + | chr1.3:78986157-78986176 | None:intergenic | 25.0% |
| ! | ATTGGATGATAAGAGAATTA+GGG | - | chr1.3:78984263-78984282 | MS.gene029082:CDS | 25.0% |
| ! | CAAGATGAGTAATTTACATA+AGG | - | chr1.3:78989079-78989098 | MS.gene029082:intron | 25.0% |
| ! | CAGACTGTAATATAATCAAA+AGG | + | chr1.3:78987045-78987064 | None:intergenic | 25.0% |
| ! | GGTTAAACTAACTTATCATA+TGG | + | chr1.3:78987132-78987151 | None:intergenic | 25.0% |
| ! | GTAATTATAATGAGAGAAAG+AGG | + | chr1.3:78986130-78986149 | None:intergenic | 25.0% |
| ! | TAAAACATAAACAAACAAGG+AGG | + | chr1.3:78988462-78988481 | None:intergenic | 25.0% |
| ! | TACTACCACAAATGAAAATA+AGG | - | chr1.3:78985044-78985063 | MS.gene029082:intron | 25.0% |
| ! | TATGCATAGGTTTAGAAAAA+AGG | - | chr1.3:78986895-78986914 | MS.gene029082:intron | 25.0% |
| ! | TGAAATAAATCAGTATCCTA+AGG | + | chr1.3:78985304-78985323 | None:intergenic | 25.0% |
| ! | TGAAATACTAAAACCTGTAT+TGG | - | chr1.3:78985948-78985967 | MS.gene029082:intron | 25.0% |
| ! | TGCTGAATCAATAAAATTGA+AGG | - | chr1.3:78986089-78986108 | MS.gene029082:intron | 25.0% |
| ! | TGTTCTTATGATTACTTTGT+TGG | - | chr1.3:78984480-78984499 | MS.gene029082:CDS | 25.0% |
| ! | TTACTATTTAGATAACAAGC+CGG | + | chr1.3:78988402-78988421 | None:intergenic | 25.0% |
| ! | TTAGAAACCTATACTTTACA+AGG | - | chr1.3:78987972-78987991 | MS.gene029082:CDS | 25.0% |
| ! | TTGTAATTTATCTGCATTCA+GGG | - | chr1.3:78988701-78988720 | MS.gene029082:intron | 25.0% |
| ! | TTTATGTGTCAATGCTTTAT+AGG | - | chr1.3:78984770-78984789 | MS.gene029082:CDS | 25.0% |
| ! | TTTGTAATTTATCTGCATTC+AGG | - | chr1.3:78988700-78988719 | MS.gene029082:intron | 25.0% |
| !! | AGACGATTATTATGATAATG+AGG | - | chr1.3:78984338-78984357 | MS.gene029082:CDS | 25.0% |
| !! | AGTAATTTACATAAGGTACT+AGG | - | chr1.3:78989086-78989105 | MS.gene029082:intron | 25.0% |
| !! | AGTTATTGATAGTTGATTAG+TGG | - | chr1.3:78987650-78987669 | MS.gene029082:CDS | 25.0% |
| !! | ATTAACTTTTGGATTTTGTC+AGG | - | chr1.3:78988787-78988806 | MS.gene029082:intron | 25.0% |
| !! | GGAAAAATTCAACTTTTATG+TGG | - | chr1.3:78988884-78988903 | MS.gene029082:intron | 25.0% |
| !! | GTAATTTACATAAGGTACTA+GGG | - | chr1.3:78989087-78989106 | MS.gene029082:intron | 25.0% |
| !! | GTTATTGATAGTTGATTAGT+GGG | - | chr1.3:78987651-78987670 | MS.gene029082:CDS | 25.0% |
| !! | TGTAAAGTATATTTAGAGCA+AGG | - | chr1.3:78988142-78988161 | MS.gene029082:CDS | 25.0% |
| !! | TTAACTTTTGGATTTTGTCA+GGG | - | chr1.3:78988788-78988807 | MS.gene029082:intron | 25.0% |
| !!! | ACGATTTGGTGTTAATAAAA+TGG | - | chr1.3:78987170-78987189 | MS.gene029082:intron | 25.0% |
| !!! | ATTTTAGAACCATAAGAGAA+TGG | + | chr1.3:78986702-78986721 | None:intergenic | 25.0% |
| !!! | CATTTTAGAAACTTATGCAT+AGG | - | chr1.3:78986882-78986901 | MS.gene029082:intron | 25.0% |
| !!! | TCTTATGGTTCTAAAATTTC+TGG | - | chr1.3:78986705-78986724 | MS.gene029082:intron | 25.0% |
| !!! | TGATTTTGATTCCATAGTAT+TGG | - | chr1.3:78984509-78984528 | MS.gene029082:CDS | 25.0% |
| AAAATTGACATATTTGCAGC+AGG | + | chr1.3:78985506-78985525 | None:intergenic | 30.0% | |
| AAACACACAAGCTATTCAAA+GGG | + | chr1.3:78987245-78987264 | None:intergenic | 30.0% | |
| AAACATAAACAAACAAGGAG+GGG | + | chr1.3:78988460-78988479 | None:intergenic | 30.0% | |
| AAATTACTCATCTTGACCTT+TGG | + | chr1.3:78989074-78989093 | None:intergenic | 30.0% | |
| AACAGAAAATTCATCCTCTT+AGG | + | chr1.3:78986042-78986061 | None:intergenic | 30.0% | |
| AAGTAACCTTAGCACATTAA+AGG | - | chr1.3:78985805-78985824 | MS.gene029082:intron | 30.0% | |
| AATTATGGTGACATTACCAA+CGG | - | chr1.3:78988834-78988853 | MS.gene029082:intron | 30.0% | |
| ACAGTTACAAGATATAACGA+AGG | + | chr1.3:78984578-78984597 | None:intergenic | 30.0% | |
| ACCAAATCGTCTTACTATTA+GGG | + | chr1.3:78987333-78987352 | None:intergenic | 30.0% | |
| ACCAAATCGTCTTTACTATT+AGG | + | chr1.3:78987160-78987179 | None:intergenic | 30.0% | |
| AGATGAAGGCAATCTTAAAA+TGG | - | chr1.3:78988863-78988882 | MS.gene029082:intron | 30.0% | |
| ATCATATAAGGATGCAATAG+AGG | - | chr1.3:78987817-78987836 | MS.gene029082:intron | 30.0% | |
| ATTAAGTTCGGATTGATATC+AGG | + | chr1.3:78986294-78986313 | None:intergenic | 30.0% | |
| CAAAGCACATATAAGACAAT+TGG | + | chr1.3:78986175-78986194 | None:intergenic | 30.0% | |
| CAATGAATCATTGTTGTCTT+TGG | + | chr1.3:78984397-78984416 | None:intergenic | 30.0% | |
| CAGAGAAAGATGTATAACTA+TGG | + | chr1.3:78985327-78985346 | None:intergenic | 30.0% | |
| CCAAATCGTCTTTACTATTA+GGG | + | chr1.3:78987159-78987178 | None:intergenic | 30.0% | |
| CCAGGAAACATATTTATTAG+AGG | + | chr1.3:78985665-78985684 | None:intergenic | 30.0% | |
| CCTCTAATAAATATGTTTCC+TGG | - | chr1.3:78985662-78985681 | MS.gene029082:intron | 30.0% | |
| CTTTAAATCGTAGATCAGTT+TGG | - | chr1.3:78986952-78986971 | MS.gene029082:intron | 30.0% | |
| GATATCCTTGTCATCATATA+AGG | - | chr1.3:78987805-78987824 | MS.gene029082:intron | 30.0% | |
| GGAATACGACATATATTGTA+GGG | + | chr1.3:78985894-78985913 | None:intergenic | 30.0% | |
| GTGCCAAACTTGAATATTAT+GGG | - | chr1.3:78987279-78987298 | MS.gene029082:CDS | 30.0% | |
| GTGGATGATAATAATGTTAG+CGG | - | chr1.3:78988049-78988068 | MS.gene029082:CDS | 30.0% | |
| GTTATACATCTTTCTCTGAA+TGG | - | chr1.3:78985329-78985348 | MS.gene029082:intron | 30.0% | |
| TAAATCCAACACCAATACTA+TGG | + | chr1.3:78984523-78984542 | None:intergenic | 30.0% | |
| TACAATATATGTCGTATTCC+AGG | - | chr1.3:78985894-78985913 | MS.gene029082:intron | 30.0% | |
| TATTGTGTTTGTGTAGTTCA+AGG | - | chr1.3:78986421-78986440 | MS.gene029082:intron | 30.0% | |
| TCAAAATGAGGATTAGATTC+AGG | + | chr1.3:78985982-78986001 | None:intergenic | 30.0% | |
| TCTGTTTATTAATGTTGACC+TGG | + | chr1.3:78985915-78985934 | None:intergenic | 30.0% | |
| TGATGACAAGGATATCTTTA+AGG | + | chr1.3:78987801-78987820 | None:intergenic | 30.0% | |
| TGGAATACGACATATATTGT+AGG | + | chr1.3:78985895-78985914 | None:intergenic | 30.0% | |
| TGGTAAGTTCATACTTTACT+TGG | - | chr1.3:78986378-78986397 | MS.gene029082:intron | 30.0% | |
| TGTAATGAAAGCAAAACTGA+AGG | - | chr1.3:78986332-78986351 | MS.gene029082:intron | 30.0% | |
| TGTACTTTCTTCTGAATTTG+AGG | + | chr1.3:78985399-78985418 | None:intergenic | 30.0% | |
| TGTATGGGGATAATAAATAC+AGG | - | chr1.3:78988193-78988212 | MS.gene029082:CDS | 30.0% | |
| TGTGCCAAACTTGAATATTA+TGG | - | chr1.3:78987278-78987297 | MS.gene029082:CDS | 30.0% | |
| TTTAATGTGCTAAGGTTACT+TGG | + | chr1.3:78985806-78985825 | None:intergenic | 30.0% | |
| TTTATTAGAGGAGCAAATTG+TGG | + | chr1.3:78985653-78985672 | None:intergenic | 30.0% | |
| ! | AAAAGGAGCATAAGAAACTA+AGG | - | chr1.3:78988976-78988995 | MS.gene029082:intron | 30.0% |
| ! | ATTATTATGATAATGAGGCC+AGG | - | chr1.3:78984343-78984362 | MS.gene029082:CDS | 30.0% |
| ! | CATTAACATCAACTCTAAAG+CGG | + | chr1.3:78989325-78989344 | None:intergenic | 30.0% |
| ! | CTTCTTTTATGCCTTTATCT+TGG | - | chr1.3:78984428-78984447 | MS.gene029082:CDS | 30.0% |
| ! | TTATTATGATAATGAGGCCA+GGG | - | chr1.3:78984344-78984363 | MS.gene029082:CDS | 30.0% |
| ! | TTGATTAAAGGGTATAACCT+CGG | - | chr1.3:78988027-78988046 | MS.gene029082:CDS | 30.0% |
| !! | ATTAACATCAACTCTAAAGC+GGG | + | chr1.3:78989324-78989343 | None:intergenic | 30.0% |
| !! | TTAGCTTGCTTGAATATTGT+AGG | - | chr1.3:78987106-78987125 | MS.gene029082:intron | 30.0% |
| AAAAAAGTGATGTGTCCATG+TGG | - | chr1.3:78986540-78986559 | MS.gene029082:intron | 35.0% | |
| AAAAAGTGATGTGTCCATGT+GGG | - | chr1.3:78986541-78986560 | MS.gene029082:intron | 35.0% | |
| AACATTATTATCATCCACCG+AGG | + | chr1.3:78988047-78988066 | None:intergenic | 35.0% | |
| ACAAGTGTGTCCAATGTATT+TGG | + | chr1.3:78989263-78989282 | None:intergenic | 35.0% | |
| ACATGGACAATGTTCCAAAT+GGG | + | chr1.3:78987408-78987427 | None:intergenic | 35.0% | |
| ACCTCTCAAGCTAACTAAAA+AGG | - | chr1.3:78988959-78988978 | MS.gene029082:intron | 35.0% | |
| ACTAACAGAGTCTACATTCA+AGG | + | chr1.3:78988568-78988587 | None:intergenic | 35.0% | |
| ACTAACGAAGTCTGCATTTA+GGG | - | chr1.3:78988640-78988659 | MS.gene029082:CDS | 35.0% | |
| ACTAATGGAGTCTACATTCA+GGG | - | chr1.3:78988608-78988627 | MS.gene029082:CDS | 35.0% | |
| ACTTACAGAGTCTACATTCA+GGG | - | chr1.3:78988672-78988691 | MS.gene029082:CDS | 35.0% | |
| AGACTCTGTTAGTCAATTTC+AGG | - | chr1.3:78988575-78988594 | MS.gene029082:CDS | 35.0% | |
| AGCAAGTCAATTAAGAGGTA+TGG | - | chr1.3:78989416-78989435 | MS.gene029082:CDS | 35.0% | |
| AGCCATGTAATCACCTTAAA+CGG | + | chr1.3:78987384-78987403 | None:intergenic | 35.0% | |
| AGTTAATGAGTGAGGTGTAT+GGG | - | chr1.3:78988178-78988197 | MS.gene029082:CDS | 35.0% | |
| ATTAGGATAGGCTATCAGTT+CGG | - | chr1.3:78986986-78987005 | MS.gene029082:intron | 35.0% | |
| CAAACACACAAGCTATTCAA+AGG | + | chr1.3:78987246-78987265 | None:intergenic | 35.0% | |
| CAAGTGTGTCCAATGTATTT+GGG | + | chr1.3:78989262-78989281 | None:intergenic | 35.0% | |
| CACCAAATCGTCTTACTATT+AGG | + | chr1.3:78987334-78987353 | None:intergenic | 35.0% | |
| CATCAAAATTCACGACACTT+TGG | - | chr1.3:78987066-78987085 | MS.gene029082:intron | 35.0% | |
| CATGATTATACTCTGTTAGC+TGG | - | chr1.3:78985260-78985279 | MS.gene029082:intron | 35.0% | |
| CCAGAATCCTTGTAAAGTAT+AGG | + | chr1.3:78987982-78988001 | None:intergenic | 35.0% | |
| CCATTTAAGTACCCTACAAT+GGG | - | chr1.3:78987744-78987763 | MS.gene029082:intron | 35.0% | |
| CCCTAATAGTAAAGACGATT+TGG | - | chr1.3:78987156-78987175 | MS.gene029082:intron | 35.0% | |
| CCTATACTTTACAAGGATTC+TGG | - | chr1.3:78987979-78987998 | MS.gene029082:CDS | 35.0% | |
| CCTCTTTGAGTAGAATCAAA+GGG | + | chr1.3:78987895-78987914 | None:intergenic | 35.0% | |
| CTAATAGGTACTCAACCATA+CGG | + | chr1.3:78986498-78986517 | None:intergenic | 35.0% | |
| CTTGCAAATCTAGTATTGTC+CGG | - | chr1.3:78988380-78988399 | MS.gene029082:intron | 35.0% | |
| GAAGAGAGAAATGCATTCAT+TGG | - | chr1.3:78984904-78984923 | MS.gene029082:intron | 35.0% | |
| GACGATTTCTTTCCTATTCA+GGG | - | chr1.3:78988732-78988751 | MS.gene029082:intron | 35.0% | |
| GACTCTGTTAGTCAATTTCA+GGG | - | chr1.3:78988576-78988595 | MS.gene029082:CDS | 35.0% | |
| GATGATAATAATGTTAGCGG+AGG | - | chr1.3:78988052-78988071 | MS.gene029082:CDS | 35.0% | |
| GCTTAGTGTTGTAACAAACT+TGG | - | chr1.3:78988319-78988338 | MS.gene029082:intron | 35.0% | |
| GGATCAACCACAATAAATGA+AGG | + | chr1.3:78987024-78987043 | None:intergenic | 35.0% | |
| GTAATCGAAGATACCTTGAT+AGG | + | chr1.3:78985027-78985046 | None:intergenic | 35.0% | |
| GTAGAATCAAAGGGTTGAAA+AGG | + | chr1.3:78987886-78987905 | None:intergenic | 35.0% | |
| GTTAAGGAGGAAGTTACTAA+TGG | - | chr1.3:78984366-78984385 | MS.gene029082:CDS | 35.0% | |
| TACATGGACAATGTTCCAAA+TGG | + | chr1.3:78987409-78987428 | None:intergenic | 35.0% | |
| TACTCACCTTTAATGTGCTA+AGG | + | chr1.3:78985814-78985833 | None:intergenic | 35.0% | |
| TACTTTACAAGGATTCTGGT+TGG | - | chr1.3:78987983-78988002 | MS.gene029082:CDS | 35.0% | |
| TAGTATTAACAGCTCTCATG+AGG | - | chr1.3:78985071-78985090 | MS.gene029082:intron | 35.0% | |
| TAGTTAATGAGTGAGGTGTA+TGG | - | chr1.3:78988177-78988196 | MS.gene029082:CDS | 35.0% | |
| TATATGCCTGTTTAACCGTA+TGG | - | chr1.3:78986480-78986499 | MS.gene029082:intron | 35.0% | |
| TCATACTTTACTTGGACTAC+TGG | - | chr1.3:78986386-78986405 | MS.gene029082:intron | 35.0% | |
| TCCATTTAAGTACCCTACAA+TGG | - | chr1.3:78987743-78987762 | MS.gene029082:intron | 35.0% | |
| TCCCTAATAGTAAGACGATT+TGG | - | chr1.3:78987329-78987348 | MS.gene029082:CDS | 35.0% | |
| TCCTCTTTGAGTAGAATCAA+AGG | + | chr1.3:78987896-78987915 | None:intergenic | 35.0% | |
| TCTGGAAAATCTAGTACAGA+TGG | - | chr1.3:78985096-78985115 | MS.gene029082:intron | 35.0% | |
| TCTTAGGTGGTGATATATCT+CGG | - | chr1.3:78986607-78986626 | MS.gene029082:intron | 35.0% | |
| TGACGATTTCTTTCCTATTC+AGG | - | chr1.3:78988731-78988750 | MS.gene029082:intron | 35.0% | |
| TGCATCCTTATATGATGACA+AGG | + | chr1.3:78987813-78987832 | None:intergenic | 35.0% | |
| TTATGCTTAGGCGTATCAAT+TGG | - | chr1.3:78989444-78989463 | MS.gene029082:CDS | 35.0% | |
| TTGCAATTTCTCTGCATTCA+GGG | + | chr1.3:78988539-78988558 | None:intergenic | 35.0% | |
| TTGGAACATTGTCCATGTAT+GGG | - | chr1.3:78987410-78987429 | MS.gene029082:CDS | 35.0% | |
| TTGTGCTTTCCATTCTCTTA+TGG | - | chr1.3:78986690-78986709 | MS.gene029082:intron | 35.0% | |
| TTTCGATGACCCAAATACAT+TGG | - | chr1.3:78989250-78989269 | MS.gene029082:CDS | 35.0% | |
| TTTGCAATTTCTCTGCATTC+AGG | + | chr1.3:78988540-78988559 | None:intergenic | 35.0% | |
| ! | AAAAGGGAGATTAGTCACTT+TGG | + | chr1.3:78988759-78988778 | None:intergenic | 35.0% |
| ! | AATTTTCTGTTTGTGGAGGA+AGG | - | chr1.3:78986051-78986070 | MS.gene029082:intron | 35.0% |
| ! | ACCACTCAATATCTGGAATT+GGG | + | chr1.3:78986359-78986378 | None:intergenic | 35.0% |
| ! | ACTTTTATGTGGAACATCCT+CGG | - | chr1.3:78988895-78988914 | MS.gene029082:intron | 35.0% |
| ! | AGAAGAGCTTTTACCGTTTA+AGG | - | chr1.3:78987368-78987387 | MS.gene029082:CDS | 35.0% |
| ! | ATAAGAGAATGGAAAGCACA+AGG | + | chr1.3:78986691-78986710 | None:intergenic | 35.0% |
| ! | ATATTTAGAGCAAGGAGACA+GGG | - | chr1.3:78988150-78988169 | MS.gene029082:CDS | 35.0% |
| ! | ATCAATTTTGTGTCTGTCAC+CGG | - | chr1.3:78984689-78984708 | MS.gene029082:CDS | 35.0% |
| ! | CTTCTGCATTCTGGAAATTA+TGG | - | chr1.3:78988819-78988838 | MS.gene029082:intron | 35.0% |
| ! | GAGGATGAATTTTCTGTTTG+TGG | - | chr1.3:78986044-78986063 | MS.gene029082:intron | 35.0% |
| ! | GATGAATTTTCTGTTTGTGG+AGG | - | chr1.3:78986047-78986066 | MS.gene029082:intron | 35.0% |
| ! | GCAAGTCAATTAAGAGGTAT+GGG | - | chr1.3:78989417-78989436 | MS.gene029082:CDS | 35.0% |
| ! | GTAAAGTTTTTGTGGATGCT+GGG | - | chr1.3:78989615-78989634 | MS.gene029082:CDS | 35.0% |
| ! | GTTTAAGACCTCAAATGTGA+GGG | - | chr1.3:78986568-78986587 | MS.gene029082:intron | 35.0% |
| ! | TAAAGTTTTTGTGGATGCTG+GGG | - | chr1.3:78989616-78989635 | MS.gene029082:CDS | 35.0% |
| ! | TACCGTTTAAGGTGATTACA+TGG | - | chr1.3:78987379-78987398 | MS.gene029082:CDS | 35.0% |
| ! | TATATTTAGAGCAAGGAGAC+AGG | - | chr1.3:78988149-78988168 | MS.gene029082:CDS | 35.0% |
| ! | TCACATTTGAGGTCTTAAAC+AGG | + | chr1.3:78986568-78986587 | None:intergenic | 35.0% |
| ! | TCAGAAGAAAGTACACAGTT+TGG | - | chr1.3:78985404-78985423 | MS.gene029082:intron | 35.0% |
| ! | TGACTACTCTTTTCTCATTC+AGG | + | chr1.3:78988509-78988528 | None:intergenic | 35.0% |
| ! | TGGCCCATAATATTCAAGTT+TGG | + | chr1.3:78987285-78987304 | None:intergenic | 35.0% |
| ! | TGTTTAAGACCTCAAATGTG+AGG | - | chr1.3:78986567-78986586 | MS.gene029082:intron | 35.0% |
| ! | TTTAAGACCCGATACCTATT+AGG | - | chr1.3:78987446-78987465 | MS.gene029082:intron | 35.0% |
| ! | TTTGGAACATTGTCCATGTA+TGG | - | chr1.3:78987409-78987428 | MS.gene029082:CDS | 35.0% |
| !! | AATTCTTTTGGAGGTCCTAT+AGG | - | chr1.3:78987485-78987504 | MS.gene029082:intron | 35.0% |
| !! | CCTCATTTTGATGAGAGAAT+GGG | - | chr1.3:78985991-78986010 | MS.gene029082:intron | 35.0% |
| !! | TCCTCATTTTGATGAGAGAA+TGG | - | chr1.3:78985990-78986009 | MS.gene029082:intron | 35.0% |
| !! | TGATTCCATAGTATTGGTGT+TGG | - | chr1.3:78984515-78984534 | MS.gene029082:CDS | 35.0% |
| !!! | AACGCCCTTATTTTCATTTG+TGG | + | chr1.3:78985052-78985071 | None:intergenic | 35.0% |
| !!! | GAATTTGTTGGAAGGTCTTT+TGG | - | chr1.3:78986802-78986821 | MS.gene029082:intron | 35.0% |
| !!! | TCCTTTTTAGTTAGCTTGAG+AGG | + | chr1.3:78988963-78988982 | None:intergenic | 35.0% |
| AAAAGAATTCTCCCCAATGG+GGG | + | chr1.3:78987474-78987493 | None:intergenic | 40.0% | |
| AACATTGTCCATGTATGGGA+GGG | - | chr1.3:78987414-78987433 | MS.gene029082:CDS | 40.0% | |
| AAGAAGGAACGTAGGAGATT+TGG | - | chr1.3:78984297-78984316 | MS.gene029082:CDS | 40.0% | |
| AAGCATCCCATTCTTAAGTG+GGG | - | chr1.3:78987524-78987543 | MS.gene029082:intron | 40.0% | |
| AAGCTCTTCTTGATGTTGCT+TGG | + | chr1.3:78987358-78987377 | None:intergenic | 40.0% | |
| ACAACGAAGCACATTTCTCT+CGG | + | chr1.3:78984809-78984828 | None:intergenic | 40.0% | |
| ACACACTTGTCTCACTTTAC+AGG | - | chr1.3:78989273-78989292 | MS.gene029082:CDS | 40.0% | |
| ACCAACGGTACTATAGATGA+AGG | - | chr1.3:78988849-78988868 | MS.gene029082:intron | 40.0% | |
| ACCAGAACACATTTATTGGC+CGG | + | chr1.3:78989521-78989540 | None:intergenic | 40.0% | |
| ACCCAATTCCAGATATTGAG+TGG | - | chr1.3:78986355-78986374 | MS.gene029082:intron | 40.0% | |
| ACTCAACCATACGGTTAAAC+AGG | + | chr1.3:78986489-78986508 | None:intergenic | 40.0% | |
| ACTGATAGCCTATCCTAATC+AGG | + | chr1.3:78986985-78987004 | None:intergenic | 40.0% | |
| ACTTACCACCACTCAATATC+TGG | + | chr1.3:78986366-78986385 | None:intergenic | 40.0% | |
| AGAAGGAACGTAGGAGATTT+GGG | - | chr1.3:78984298-78984317 | MS.gene029082:CDS | 40.0% | |
| ATACGATAGAGACGAAAGAG+AGG | - | chr1.3:78984131-78984150 | MS.gene029082:CDS | 40.0% | |
| ATAGAGAACATAGCGAGGAT+CGG | - | chr1.3:78984238-78984257 | MS.gene029082:CDS | 40.0% | |
| ATGCAATTGGTGTGTCAGTT+AGG | - | chr1.3:78988238-78988257 | MS.gene029082:CDS | 40.0% | |
| ATTAGCGTTGTTGTGGTTGA+AGG | - | chr1.3:78989389-78989408 | MS.gene029082:CDS | 40.0% | |
| CAAAAGAATTCTCCCCAATG+GGG | + | chr1.3:78987475-78987494 | None:intergenic | 40.0% | |
| CAAGCATCCCATTCTTAAGT+GGG | - | chr1.3:78987523-78987542 | MS.gene029082:intron | 40.0% | |
| CAATTCCAGATATTGAGTGG+TGG | - | chr1.3:78986358-78986377 | MS.gene029082:intron | 40.0% | |
| CACACTTGTCTCACTTTACA+GGG | - | chr1.3:78989274-78989293 | MS.gene029082:CDS | 40.0% | |
| CCAAAAGAATTCTCCCCAAT+GGG | + | chr1.3:78987476-78987495 | None:intergenic | 40.0% | |
| CCAATAAATGTGTTCTGGTG+TGG | - | chr1.3:78989522-78989541 | MS.gene029082:CDS | 40.0% | |
| CCACACCAGAACACATTTAT+TGG | + | chr1.3:78989525-78989544 | None:intergenic | 40.0% | |
| CCCATTCTCTCATCAAAATG+AGG | + | chr1.3:78985994-78986013 | None:intergenic | 40.0% | |
| CCCTTTGATTCTACTCAAAG+AGG | - | chr1.3:78987892-78987911 | MS.gene029082:CDS | 40.0% | |
| CGAAGATACCTTGATAGGAA+AGG | + | chr1.3:78985022-78985041 | None:intergenic | 40.0% | |
| CGTATGGTTGAGTACCTATT+AGG | - | chr1.3:78986496-78986515 | MS.gene029082:intron | 40.0% | |
| CGTCTTTACTATTAGGGAGT+TGG | + | chr1.3:78987153-78987172 | None:intergenic | 40.0% | |
| CTCCAAATTTACTCTGCATG+AGG | + | chr1.3:78986212-78986231 | None:intergenic | 40.0% | |
| CTGATAGCCTATCCTAATCA+GGG | + | chr1.3:78986984-78987003 | None:intergenic | 40.0% | |
| CTTAGGTGGTGATATATCTC+GGG | - | chr1.3:78986608-78986627 | MS.gene029082:intron | 40.0% | |
| GAAAGATAGAGAACATAGCG+AGG | - | chr1.3:78984233-78984252 | MS.gene029082:CDS | 40.0% | |
| GAACCTATTGAAGCTCGATT+TGG | + | chr1.3:78989561-78989580 | None:intergenic | 40.0% | |
| GAAGCTGAAGAAAATTCCTC+AGG | - | chr1.3:78985215-78985234 | MS.gene029082:intron | 40.0% | |
| GACTAACGAAGTCTGCATTT+AGG | - | chr1.3:78988639-78988658 | MS.gene029082:CDS | 40.0% | |
| GACTAATGGAGTCTACATTC+AGG | - | chr1.3:78988607-78988626 | MS.gene029082:CDS | 40.0% | |
| GACTTACAGAGTCTACATTC+AGG | - | chr1.3:78988671-78988690 | MS.gene029082:CDS | 40.0% | |
| GATAATAATGTTAGCGGAGG+TGG | - | chr1.3:78988055-78988074 | MS.gene029082:CDS | 40.0% | |
| GATACCTTGATAGGAAAGGA+AGG | + | chr1.3:78985018-78985037 | None:intergenic | 40.0% | |
| GATACTTCGAGTATCCACAA+TGG | + | chr1.3:78987775-78987794 | None:intergenic | 40.0% | |
| GGACGTGAAATAGATGAACA+TGG | - | chr1.3:78985758-78985777 | MS.gene029082:intron | 40.0% | |
| GGGTTGTTAGTTAATGAGTG+AGG | - | chr1.3:78988170-78988189 | MS.gene029082:CDS | 40.0% | |
| GGTATGGGAAACTTATGCTT+AGG | - | chr1.3:78989432-78989451 | MS.gene029082:CDS | 40.0% | |
| GTGGAAGCAAGTCAATTAAG+AGG | - | chr1.3:78989411-78989430 | MS.gene029082:CDS | 40.0% | |
| GTTAATGAGTGAGGTGTATG+GGG | - | chr1.3:78988179-78988198 | MS.gene029082:CDS | 40.0% | |
| TACGATAGAGACGAAAGAGA+GGG | - | chr1.3:78984132-78984151 | MS.gene029082:CDS | 40.0% | |
| TACTTTACATACACTGGGCT+AGG | + | chr1.3:78988131-78988150 | None:intergenic | 40.0% | |
| TAGTAGTGATGCCTTAGCAA+AGG | - | chr1.3:78985155-78985174 | MS.gene029082:intron | 40.0% | |
| TATAAGGATGCAATAGAGGC+AGG | - | chr1.3:78987821-78987840 | MS.gene029082:intron | 40.0% | |
| TCACCGACACTTCTAATCAA+AGG | - | chr1.3:78984634-78984653 | MS.gene029082:CDS | 40.0% | |
| TCAGGGACTAAAGTGACTAA+TGG | - | chr1.3:78988593-78988612 | MS.gene029082:CDS | 40.0% | |
| TCCAAAAGAATTCTCCCCAA+TGG | + | chr1.3:78987477-78987496 | None:intergenic | 40.0% | |
| TCTACAACTGCTGGAAAACT+TGG | - | chr1.3:78985123-78985142 | MS.gene029082:intron | 40.0% | |
| TCTATCTTTCCTCTTATGCG+AGG | + | chr1.3:78984223-78984242 | None:intergenic | 40.0% | |
| TCTCCATTGTAGATGCTCTT+AGG | - | chr1.3:78986591-78986610 | MS.gene029082:intron | 40.0% | |
| TGATGGTATTAGCGTTGTTG+TGG | - | chr1.3:78989382-78989401 | MS.gene029082:CDS | 40.0% | |
| TGATTACATGGCTACCCATT+TGG | - | chr1.3:78987391-78987410 | MS.gene029082:CDS | 40.0% | |
| TGCCTCATGCAGAGTAAATT+TGG | - | chr1.3:78986207-78986226 | MS.gene029082:intron | 40.0% | |
| TGTTTCAGCAAGGGAAGATT+AGG | - | chr1.3:78987851-78987870 | MS.gene029082:CDS | 40.0% | |
| TGTTTGTGGAGGAAGGAAAA+TGG | - | chr1.3:78986058-78986077 | MS.gene029082:intron | 40.0% | |
| TTAGGATAGGCTATCAGTTC+GGG | - | chr1.3:78986987-78987006 | MS.gene029082:intron | 40.0% | |
| TTAGGTGGTGATATATCTCG+GGG | - | chr1.3:78986609-78986628 | MS.gene029082:intron | 40.0% | |
| TTCACTCCATCACACATCTT+TGG | + | chr1.3:78986785-78986804 | None:intergenic | 40.0% | |
| TTCATCTATTTCACGTCCCT+GGG | + | chr1.3:78985756-78985775 | None:intergenic | 40.0% | |
| TTGCCAAATCGAGCTTCAAT+AGG | - | chr1.3:78989555-78989574 | MS.gene029082:CDS | 40.0% | |
| ! | ACATGTGTTAAGTATCGTGC+AGG | + | chr1.3:78984662-78984681 | None:intergenic | 40.0% |
| ! | AGCTGCTCGTAAAGTTTTTG+TGG | - | chr1.3:78989607-78989626 | MS.gene029082:CDS | 40.0% |
| ! | AGCTTCAAAGTTGGTTGCAT+TGG | + | chr1.3:78985582-78985601 | None:intergenic | 40.0% |
| ! | ATGTATTTTCTCCACAGCCT+GGG | + | chr1.3:78988276-78988295 | None:intergenic | 40.0% |
| ! | ATTAAAGGGTATAACCTCGG+TGG | - | chr1.3:78988030-78988049 | MS.gene029082:CDS | 40.0% |
| ! | ATTGGGGAGAATTCTTTTGG+AGG | - | chr1.3:78987476-78987495 | MS.gene029082:intron | 40.0% |
| ! | CACCACTCAATATCTGGAAT+TGG | + | chr1.3:78986360-78986379 | None:intergenic | 40.0% |
| ! | CCCATTGTAGGGTACTTAAA+TGG | + | chr1.3:78987747-78987766 | None:intergenic | 40.0% |
| ! | CGTAAAGTTTTTGTGGATGC+TGG | - | chr1.3:78989614-78989633 | MS.gene029082:CDS | 40.0% |
| ! | CTCCTTAGCTATACGCTTTT+GGG | + | chr1.3:78989003-78989022 | None:intergenic | 40.0% |
| ! | GTGCCTTTGATTAGAAGTGT+CGG | + | chr1.3:78984640-78984659 | None:intergenic | 40.0% |
| ! | GTGTGATGGAGTGAATTTGT+TGG | - | chr1.3:78986790-78986809 | MS.gene029082:intron | 40.0% |
| ! | TATGTATTTTCTCCACAGCC+TGG | + | chr1.3:78988277-78988296 | None:intergenic | 40.0% |
| ! | TCTCCTTAGCTATACGCTTT+TGG | + | chr1.3:78989004-78989023 | None:intergenic | 40.0% |
| ! | TTAGTTAGCTTGAGAGGTTG+AGG | + | chr1.3:78988957-78988976 | None:intergenic | 40.0% |
| !! | CTCATCTTGACCTTTGGTTT+TGG | + | chr1.3:78989068-78989087 | None:intergenic | 40.0% |
| !! | CTTTTGGTTGCATTGGAAGA+TGG | - | chr1.3:78986818-78986837 | MS.gene029082:intron | 40.0% |
| !! | GATGGAGTGAATTTGTTGGA+AGG | - | chr1.3:78986794-78986813 | MS.gene029082:intron | 40.0% |
| !! | GTTTGATGTGTGCTGTTTCA+GGG | - | chr1.3:78984928-78984947 | MS.gene029082:intron | 40.0% |
| !! | TACGTACTTCCTTTTCAAGC+CGG | + | chr1.3:78989136-78989155 | None:intergenic | 40.0% |
| !! | TGTTTGATGTGTGCTGTTTC+AGG | - | chr1.3:78984927-78984946 | MS.gene029082:intron | 40.0% |
| !!! | ACAGGTTGAGCTGTTTTGAT+AGG | - | chr1.3:78988211-78988230 | MS.gene029082:CDS | 40.0% |
| !!! | AGGTTGAGCTGTTTTGATAG+GGG | - | chr1.3:78988213-78988232 | MS.gene029082:CDS | 40.0% |
| !!! | ATCTTGACCTTTGGTTTTGG+CGG | + | chr1.3:78989065-78989084 | None:intergenic | 40.0% |
| !!! | CAGGTTGAGCTGTTTTGATA+GGG | - | chr1.3:78988212-78988231 | MS.gene029082:CDS | 40.0% |
| AAACCGTTTGACTGGATGTG+CGG | - | chr1.3:78989352-78989371 | MS.gene029082:CDS | 45.0% | |
| AAAGAGAGGGTAGCAAAGGT+AGG | - | chr1.3:78984145-78984164 | MS.gene029082:CDS | 45.0% | |
| AAATGACCTCTCTCATCCCA+AGG | - | chr1.3:78989298-78989317 | MS.gene029082:CDS | 45.0% | |
| AAATGTGTTCTGGTGTGGCA+AGG | - | chr1.3:78989527-78989546 | MS.gene029082:CDS | 45.0% | |
| AACAGCTCTCATGAGGATTC+TGG | - | chr1.3:78985078-78985097 | MS.gene029082:intron | 45.0% | |
| AATAAAATGGAGACGAGCGC+TGG | - | chr1.3:78987183-78987202 | MS.gene029082:intron | 45.0% | |
| AATCACAGAGAAGACCGAGA+AGG | - | chr1.3:78984087-78984106 | MS.gene029082:CDS | 45.0% | |
| AATGGAGACCCTCACATTTG+AGG | + | chr1.3:78986579-78986598 | None:intergenic | 45.0% | |
| ACAATGGAGACACCCATTGT+AGG | + | chr1.3:78987759-78987778 | None:intergenic | 45.0% | |
| ACAGCTTGGTCCCAATAATG+AGG | + | chr1.3:78989644-78989663 | None:intergenic | 45.0% | |
| ACCTATTAGGTACCCCCATT+GGG | - | chr1.3:78987459-78987478 | MS.gene029082:intron | 45.0% | |
| ACCTTGATAGGAAAGGAAGG+AGG | + | chr1.3:78985015-78985034 | None:intergenic | 45.0% | |
| ACGAGAGAGACAAATCCGAT+AGG | - | chr1.3:78983968-78983987 | MS.gene029082:CDS | 45.0% | |
| ACGTCTGACAGCTTCAAAGT+TGG | + | chr1.3:78985591-78985610 | None:intergenic | 45.0% | |
| ACTCCATCACACATCTTTGG+TGG | + | chr1.3:78986782-78986801 | None:intergenic | 45.0% | |
| AGAGTGCACAAGAGATTAGG+AGG | - | chr1.3:78986924-78986943 | MS.gene029082:intron | 45.0% | |
| AGATTCAGACGATGACAAGC+CGG | - | chr1.3:78989499-78989518 | MS.gene029082:CDS | 45.0% | |
| AGCAGAGTGCACAAGAGATT+AGG | - | chr1.3:78986921-78986940 | MS.gene029082:intron | 45.0% | |
| AGCTCAAGCAAAAGAGCAGA+AGG | - | chr1.3:78986233-78986252 | MS.gene029082:intron | 45.0% | |
| AGGTAAGGGATGTTTCAGCA+AGG | - | chr1.3:78987841-78987860 | MS.gene029082:CDS | 45.0% | |
| AGTAACTTCCTCCTTAACCC+TGG | + | chr1.3:78984364-78984383 | None:intergenic | 45.0% | |
| AGTGCACAAGAGATTAGGAG+GGG | - | chr1.3:78986926-78986945 | MS.gene029082:intron | 45.0% | |
| AGTTCTCTGACAGCTTCCTT+AGG | - | chr1.3:78985285-78985304 | MS.gene029082:intron | 45.0% | |
| ATGCCACCAAAGATGTGTGA+TGG | - | chr1.3:78986776-78986795 | MS.gene029082:intron | 45.0% | |
| ATGCTGGGGTTCCTCATTAT+TGG | - | chr1.3:78989630-78989649 | MS.gene029082:CDS | 45.0% | |
| CAAACAAGCACAGCTAGCAA+AGG | - | chr1.3:78986257-78986276 | MS.gene029082:intron | 45.0% | |
| CAAGATACTCCTCGCATAAG+AGG | - | chr1.3:78984211-78984230 | MS.gene029082:CDS | 45.0% | |
| CAATGGAGACACCCATTGTA+GGG | + | chr1.3:78987758-78987777 | None:intergenic | 45.0% | |
| CATAGAACCGCCAAAACCAA+AGG | - | chr1.3:78989055-78989074 | MS.gene029082:intron | 45.0% | |
| CCAAGCTGTCAACTATACTG+AGG | - | chr1.3:78989655-78989674 | MS.gene029082:CDS | 45.0% | |
| CCATTGTAGATGCTCTTAGG+TGG | - | chr1.3:78986594-78986613 | MS.gene029082:intron | 45.0% | |
| CCTCAGTATAGTTGACAGCT+TGG | + | chr1.3:78989658-78989677 | None:intergenic | 45.0% | |
| CTTTGCTAGCTGTGCTTGTT+TGG | + | chr1.3:78986259-78986278 | None:intergenic | 45.0% | |
| GAACATTGTCCATGTATGGG+AGG | - | chr1.3:78987413-78987432 | MS.gene029082:CDS | 45.0% | |
| GAAGGAACGTAGGAGATTTG+GGG | - | chr1.3:78984299-78984318 | MS.gene029082:CDS | 45.0% | |
| GAGCAAATTGTGGATCATGG+CGG | + | chr1.3:78985643-78985662 | None:intergenic | 45.0% | |
| GAGGAGCAAATTGTGGATCA+TGG | + | chr1.3:78985646-78985665 | None:intergenic | 45.0% | |
| GAGTGCACAAGAGATTAGGA+GGG | - | chr1.3:78986925-78986944 | MS.gene029082:intron | 45.0% | |
| GATGCAATAGAGGCAGGTAA+GGG | - | chr1.3:78987827-78987846 | MS.gene029082:intron | 45.0% | |
| GATGGATCATCTACAACTGC+TGG | - | chr1.3:78985114-78985133 | MS.gene029082:intron | 45.0% | |
| GCAAGCATCCCATTCTTAAG+TGG | - | chr1.3:78987522-78987541 | MS.gene029082:intron | 45.0% | |
| GCCTTCATCTATAGTACCGT+TGG | + | chr1.3:78988853-78988872 | None:intergenic | 45.0% | |
| GCTCAAGAAAACCGTTTGAC+TGG | - | chr1.3:78989344-78989363 | MS.gene029082:CDS | 45.0% | |
| GCTTAGGCGTATCAATTGGA+CGG | - | chr1.3:78989448-78989467 | MS.gene029082:CDS | 45.0% | |
| GGAGCTGCCTTCATTTATTG+TGG | - | chr1.3:78987014-78987033 | MS.gene029082:intron | 45.0% | |
| GGTAAGGGATGTTTCAGCAA+GGG | - | chr1.3:78987842-78987861 | MS.gene029082:CDS | 45.0% | |
| GTGACAACCCTGATTAGGAT+AGG | - | chr1.3:78986974-78986993 | MS.gene029082:intron | 45.0% | |
| GTGGTGCATAACAGAGAAGT+GGG | - | chr1.3:78988074-78988093 | MS.gene029082:CDS | 45.0% | |
| GTTCATCTATTTCACGTCCC+TGG | + | chr1.3:78985757-78985776 | None:intergenic | 45.0% | |
| GTTGCATTGGAAGATGGCAT+GGG | - | chr1.3:78986824-78986843 | MS.gene029082:intron | 45.0% | |
| TAACGTCTGGTGTAGCAATC+TGG | + | chr1.3:78985688-78985707 | None:intergenic | 45.0% | |
| TACAATGGGTGTCTCCATTG+TGG | - | chr1.3:78987758-78987777 | MS.gene029082:intron | 45.0% | |
| TACCTATTAGGTACCCCCAT+TGG | - | chr1.3:78987458-78987477 | MS.gene029082:intron | 45.0% | |
| TAGAGAACATAGCGAGGATC+GGG | - | chr1.3:78984239-78984258 | MS.gene029082:CDS | 45.0% | |
| TAGGTGGTGATATATCTCGG+GGG | - | chr1.3:78986610-78986629 | MS.gene029082:intron | 45.0% | |
| TATAGGGTGAGGCGATTTCA+CGG | - | chr1.3:78986740-78986759 | MS.gene029082:intron | 45.0% | |
| TATCCCTCAGAAACCAACCA+AGG | - | chr1.3:78985709-78985728 | MS.gene029082:intron | 45.0% | |
| TCAGGATCGACATCCAATAC+AGG | + | chr1.3:78985964-78985983 | None:intergenic | 45.0% | |
| TCCTCCTTCCTTTCCTATCA+AGG | - | chr1.3:78985011-78985030 | MS.gene029082:intron | 45.0% | |
| TCGACAAAACAAAGCTCCTG+CGG | - | chr1.3:78986016-78986035 | MS.gene029082:intron | 45.0% | |
| TCGATCTCTGTTTCGCCTAT+CGG | + | chr1.3:78983986-78984005 | None:intergenic | 45.0% | |
| TGAAGAGAGGGAAGATTCAG+CGG | - | chr1.3:78984185-78984204 | MS.gene029082:CDS | 45.0% | |
| TGCCTTAGCAAAGGCTAAGA+AGG | - | chr1.3:78985164-78985183 | MS.gene029082:intron | 45.0% | |
| TGCTGGGGTTCCTCATTATT+GGG | - | chr1.3:78989631-78989650 | MS.gene029082:CDS | 45.0% | |
| TGGTGCATAACAGAGAAGTG+GGG | - | chr1.3:78988075-78988094 | MS.gene029082:CDS | 45.0% | |
| TTCACGACACTTTGGATGAG+TGG | - | chr1.3:78987074-78987093 | MS.gene029082:intron | 45.0% | |
| TTGATAGGAAAGGAAGGAGG+AGG | + | chr1.3:78985012-78985031 | None:intergenic | 45.0% | |
| TTGCATTGGAAGATGGCATG+GGG | - | chr1.3:78986825-78986844 | MS.gene029082:intron | 45.0% | |
| TTTGATAGGGGGGATGCAAT+TGG | - | chr1.3:78988225-78988244 | MS.gene029082:CDS | 45.0% | |
| ! | AGCCTTCTTAGCCTTTGCTA+AGG | + | chr1.3:78985169-78985188 | None:intergenic | 45.0% |
| ! | AGTCACTTTGGTCCCTGAAT+AGG | + | chr1.3:78988747-78988766 | None:intergenic | 45.0% |
| ! | ATCACACATCTTTGGTGGCA+TGG | + | chr1.3:78986777-78986796 | None:intergenic | 45.0% |
| ! | CACGTTGTTAAGTGTTGTGC+CGG | + | chr1.3:78984711-78984730 | None:intergenic | 45.0% |
| ! | CCCATTGGGGAGAATTCTTT+TGG | - | chr1.3:78987473-78987492 | MS.gene029082:intron | 45.0% |
| ! | CTAAGGCATCACTACTAGAG+AGG | + | chr1.3:78985152-78985171 | None:intergenic | 45.0% |
| ! | GACCCAAAAGCGTATAGCTA+AGG | - | chr1.3:78988998-78989017 | MS.gene029082:intron | 45.0% |
| ! | GTTTGGTGACAACCCTGATT+AGG | - | chr1.3:78986969-78986988 | MS.gene029082:intron | 45.0% |
| ! | TGATAATGAGGCCAGGGTTA+AGG | - | chr1.3:78984350-78984369 | MS.gene029082:CDS | 45.0% |
| ! | TGTATTTTCTCCACAGCCTG+GGG | + | chr1.3:78988275-78988294 | None:intergenic | 45.0% |
| ! | TTCTGAGGGATAGTAACGTC+TGG | + | chr1.3:78985701-78985720 | None:intergenic | 45.0% |
| ! | TTTGGATTTTGTCAGGGACG+TGG | - | chr1.3:78988794-78988813 | MS.gene029082:intron | 45.0% |
| !! | ACGTACTTCCTTTTCAAGCC+GGG | + | chr1.3:78989135-78989154 | None:intergenic | 45.0% |
| !! | CCACCTAAGAGCATCTACAA+TGG | + | chr1.3:78986597-78986616 | None:intergenic | 45.0% |
| !! | CTCTTATGCGAGGAGTATCT+TGG | + | chr1.3:78984213-78984232 | None:intergenic | 45.0% |
| !! | CTGGTCCAACTTGCTGTATA+GGG | - | chr1.3:78986724-78986743 | MS.gene029082:intron | 45.0% |
| !! | GGAAGGTCTTTTGGTTGCAT+TGG | - | chr1.3:78986811-78986830 | MS.gene029082:intron | 45.0% |
| !! | TAGGGTTTCTGAAGCGAAGA+AGG | - | chr1.3:78984281-78984300 | MS.gene029082:CDS | 45.0% |
| !! | TCTGGTCCAACTTGCTGTAT+AGG | - | chr1.3:78986723-78986742 | MS.gene029082:intron | 45.0% |
| !! | TGGGGGTACCTAATAGGTAT+CGG | + | chr1.3:78987457-78987476 | None:intergenic | 45.0% |
| !!! | GGTTGAGCTGTTTTGATAGG+GGG | - | chr1.3:78988214-78988233 | MS.gene029082:CDS | 45.0% |
| !!! | GTTGAGCTGTTTTGATAGGG+GGG | - | chr1.3:78988215-78988234 | MS.gene029082:CDS | 45.0% |
| !!! | TTTTAATATTAAAAAAGTAT+GGG | + | chr1.3:78987609-78987628 | None:intergenic | 5.0% |
| !!! | TTTTTAATATTAAAAAAGTA+TGG | + | chr1.3:78987610-78987629 | None:intergenic | 5.0% |
| AAGACGAAGAACAGGAGCCT+TGG | + | chr1.3:78985729-78985748 | None:intergenic | 50.0% | |
| AAGCAACTCAAGATCCCACC+CGG | - | chr1.3:78989114-78989133 | MS.gene029082:intron | 50.0% | |
| AAGCACATTTCTCTCGGCTC+AGG | + | chr1.3:78984803-78984822 | None:intergenic | 50.0% | |
| AATCGAAGCGCGATGAAGAG+AGG | - | chr1.3:78984172-78984191 | MS.gene029082:CDS | 50.0% | |
| AATTCATCCTCTTAGGCCGC+AGG | + | chr1.3:78986035-78986054 | None:intergenic | 50.0% | |
| ACATAGCGAGGATCGGGAAT+TGG | - | chr1.3:78984245-78984264 | MS.gene029082:CDS | 50.0% | |
| AGCACAGCTAGCAAAGGCAA+AGG | - | chr1.3:78986263-78986282 | MS.gene029082:intron | 50.0% | |
| AGCGTTGTTGTGGTTGAAGG+TGG | - | chr1.3:78989392-78989411 | MS.gene029082:CDS | 50.0% | |
| AGCTAAGGAGAAAGAGCGAC+AGG | - | chr1.3:78989013-78989032 | MS.gene029082:intron | 50.0% | |
| AGCTGCGTGAGAAGAAGGAA+AGG | - | chr1.3:78989222-78989241 | MS.gene029082:intron | 50.0% | |
| ATAGGAAAGGAAGGAGGAGG+TGG | + | chr1.3:78985009-78985028 | None:intergenic | 50.0% | |
| ATCGAAGCGCGATGAAGAGA+GGG | - | chr1.3:78984173-78984192 | MS.gene029082:CDS | 50.0% | |
| CCTATTAGGTACCCCCATTG+GGG | - | chr1.3:78987460-78987479 | MS.gene029082:intron | 50.0% | |
| CCTCACCCTATACAGCAAGT+TGG | + | chr1.3:78986732-78986751 | None:intergenic | 50.0% | |
| CGACAGGAGCTGATTAGACA+GGG | - | chr1.3:78989029-78989048 | MS.gene029082:intron | 50.0% | |
| CTCGGTCTTCTCTGTGATTC+CGG | + | chr1.3:78984086-78984105 | None:intergenic | 50.0% | |
| CTGAAGCGAAGAAGGAACGT+AGG | - | chr1.3:78984289-78984308 | MS.gene029082:CDS | 50.0% | |
| CTTGAGACCTTGGGTCCTAT+AGG | + | chr1.3:78987503-78987522 | None:intergenic | 50.0% | |
| GACGAAAGAGAGGGTAGCAA+AGG | - | chr1.3:78984141-78984160 | MS.gene029082:CDS | 50.0% | |
| GATTCCGGTCAGATCGATGA+TGG | + | chr1.3:78984071-78984090 | None:intergenic | 50.0% | |
| GCCGGCCAATAAATGTGTTC+TGG | - | chr1.3:78989517-78989536 | MS.gene029082:CDS | 50.0% | |
| GGAGGATTTACAACAGCAGC+AGG | + | chr1.3:78985530-78985549 | None:intergenic | 50.0% | |
| GGATGCAATAGAGGCAGGTA+AGG | - | chr1.3:78987826-78987845 | MS.gene029082:intron | 50.0% | |
| GGATGCTTGCTTGAGACCTT+GGG | + | chr1.3:78987512-78987531 | None:intergenic | 50.0% | |
| GGTCTTAAACAGGTCCCACA+TGG | + | chr1.3:78986558-78986577 | None:intergenic | 50.0% | |
| GGTGGTGCATAACAGAGAAG+TGG | - | chr1.3:78988073-78988092 | MS.gene029082:CDS | 50.0% | |
| GGTTGCATTGGAAGATGGCA+TGG | - | chr1.3:78986823-78986842 | MS.gene029082:intron | 50.0% | |
| GTGAGCAGGCTCACATAGAT+AGG | - | chr1.3:78989171-78989190 | MS.gene029082:intron | 50.0% | |
| GTTGTAAATCCTCCAGCCAG+TGG | - | chr1.3:78985536-78985555 | MS.gene029082:intron | 50.0% | |
| TAATGAGGCCAGGGTTAAGG+AGG | - | chr1.3:78984353-78984372 | MS.gene029082:CDS | 50.0% | |
| TCACCGCACATCCAGTCAAA+CGG | + | chr1.3:78989358-78989377 | None:intergenic | 50.0% | |
| TGTGGGCCCCACTTAAGAAT+GGG | + | chr1.3:78987533-78987552 | None:intergenic | 50.0% | |
| TTGTGGGCCCCACTTAAGAA+TGG | + | chr1.3:78987534-78987553 | None:intergenic | 50.0% | |
| ! | ACTGAGGACGATGCTGTTTG+AGG | - | chr1.3:78989671-78989690 | MS.gene029082:CDS | 50.0% |
| ! | GGATGTGCGGTGATTTGTGA+TGG | - | chr1.3:78989365-78989384 | MS.gene029082:CDS | 50.0% |
| ! | GTATTTTCTCCACAGCCTGG+GGG | + | chr1.3:78988274-78988293 | None:intergenic | 50.0% |
| ! | GTTAGCTTGAGAGGTTGAGG+TGG | + | chr1.3:78988954-78988973 | None:intergenic | 50.0% |
| ! | GTTTGAGACCCTCCCATACA+TGG | + | chr1.3:78987425-78987444 | None:intergenic | 50.0% |
| !! | ACTTCCTTTTCAAGCCGGGT+GGG | + | chr1.3:78989131-78989150 | None:intergenic | 50.0% |
| !! | ATCAACTCTAAAGCGGGCCT+TGG | + | chr1.3:78989318-78989337 | None:intergenic | 50.0% |
| !! | CCAACTTGCTGTATAGGGTG+AGG | - | chr1.3:78986729-78986748 | MS.gene029082:intron | 50.0% |
| !! | GAGCCTTGGTTGGTTTCTGA+GGG | + | chr1.3:78985715-78985734 | None:intergenic | 50.0% |
| !! | GGGGGTACCTAATAGGTATC+GGG | + | chr1.3:78987456-78987475 | None:intergenic | 50.0% |
| !! | TACTTCCTTTTCAAGCCGGG+TGG | + | chr1.3:78989132-78989151 | None:intergenic | 50.0% |
| !! | TCAACTCTAAAGCGGGCCTT+GGG | + | chr1.3:78989317-78989336 | None:intergenic | 50.0% |
| AAGGAAGCAGAGACAGGGAG+AGG | - | chr1.3:78984106-78984125 | MS.gene029082:CDS | 55.0% | |
| ACAGTGCCCTCTCTTAGTGC+TGG | - | chr1.3:78985443-78985462 | MS.gene029082:intron | 55.0% | |
| ACCGAGAAGGAAGCAGAGAC+AGG | - | chr1.3:78984100-78984119 | MS.gene029082:CDS | 55.0% | |
| ACCGCCATCATCGATCTGAC+CGG | - | chr1.3:78984064-78984083 | MS.gene029082:CDS | 55.0% | |
| AGCAGGACCTGAAGAAGCTG+AGG | + | chr1.3:78985489-78985508 | None:intergenic | 55.0% | |
| AGCTTGAGAGGTTGAGGTGG+TGG | + | chr1.3:78988951-78988970 | None:intergenic | 55.0% | |
| AGGAAGCAGAGACAGGGAGA+GGG | - | chr1.3:78984107-78984126 | MS.gene029082:CDS | 55.0% | |
| AGGACCTGAAGAAGCTGAGG+TGG | + | chr1.3:78985486-78985505 | None:intergenic | 55.0% | |
| CAGAGAAGTGGGGCTCACTA+TGG | - | chr1.3:78988085-78988104 | MS.gene029082:CDS | 55.0% | |
| CCCTGTCTCTGCTTCCTTCT+CGG | + | chr1.3:78984104-78984123 | None:intergenic | 55.0% | |
| CCGAGAAGGAAGCAGAGACA+GGG | - | chr1.3:78984101-78984120 | MS.gene029082:CDS | 55.0% | |
| CGAAGAACAGGAGCCTTGGT+TGG | + | chr1.3:78985725-78985744 | None:intergenic | 55.0% | |
| GACGTGGCACTTCTGCATTC+TGG | - | chr1.3:78988810-78988829 | MS.gene029082:intron | 55.0% | |
| GATGTCACAGCCACACTAGC+AGG | + | chr1.3:78984982-78985001 | None:intergenic | 55.0% | |
| GCCACTCCAGCACTAAGAGA+GGG | + | chr1.3:78985452-78985471 | None:intergenic | 55.0% | |
| GCGACAGGAGCTGATTAGAC+AGG | - | chr1.3:78989028-78989047 | MS.gene029082:intron | 55.0% | |
| GGATAGGCTATCAGTTCGGG+AGG | - | chr1.3:78986990-78987009 | MS.gene029082:intron | 55.0% | |
| GGGATGCTTGCTTGAGACCT+TGG | + | chr1.3:78987513-78987532 | None:intergenic | 55.0% | |
| GGTGGTCATCAGAATCGTGG+CGG | + | chr1.3:78984047-78984066 | None:intergenic | 55.0% | |
| GTCGAGACACATTCTACGCG+TGG | + | chr1.3:78987921-78987940 | None:intergenic | 55.0% | |
| GTTCTTCGTCTTGACGCCCA+GGG | - | chr1.3:78985737-78985756 | MS.gene029082:intron | 55.0% | |
| TAGGCTATCAGTTCGGGAGG+TGG | - | chr1.3:78986993-78987012 | MS.gene029082:intron | 55.0% | |
| TCTGGTGTAGCAATCTGGCC+AGG | + | chr1.3:78985683-78985702 | None:intergenic | 55.0% | |
| TGAAGCTGTCAGACGTGCTC+AGG | - | chr1.3:78985595-78985614 | MS.gene029082:intron | 55.0% | |
| TGCCACTCCAGCACTAAGAG+AGG | + | chr1.3:78985453-78985472 | None:intergenic | 55.0% | |
| TGCTGAGCTGCGTGAGAAGA+AGG | - | chr1.3:78989217-78989236 | MS.gene029082:intron | 55.0% | |
| TGGAGGTCCTATAGGACCCA+AGG | - | chr1.3:78987493-78987512 | MS.gene029082:intron | 55.0% | |
| TGGGCGTCAAGACGAAGAAC+AGG | + | chr1.3:78985737-78985756 | None:intergenic | 55.0% | |
| TGTTCTTCGTCTTGACGCCC+AGG | - | chr1.3:78985736-78985755 | MS.gene029082:intron | 55.0% | |
| TTCTTCTCACGCAGCTCAGC+AGG | + | chr1.3:78989218-78989237 | None:intergenic | 55.0% | |
| ! | ACATACACTGGGCTAGGACC+AGG | + | chr1.3:78988125-78988144 | None:intergenic | 55.0% |
| ! | AGATCCCACCCGGCTTGAAA+AGG | - | chr1.3:78989124-78989143 | MS.gene029082:intron | 55.0% |
| ! | ATCATGGCGGAATCCCATCC+TGG | + | chr1.3:78985630-78985649 | None:intergenic | 55.0% |
| ! | TCCGGTCAGATCGATGATGG+CGG | + | chr1.3:78984068-78984087 | None:intergenic | 55.0% |
| ! | TTGAGAGGTTGAGGTGGTGG+AGG | + | chr1.3:78988948-78988967 | None:intergenic | 55.0% |
| ! | TTGGTTGCATTGGCGACACC+AGG | + | chr1.3:78985572-78985591 | None:intergenic | 55.0% |
| !! | CCCCAATGGGGGTACCTAAT+AGG | + | chr1.3:78987463-78987482 | None:intergenic | 55.0% |
| !! | GGAGCCTTGGTTGGTTTCTG+AGG | + | chr1.3:78985716-78985735 | None:intergenic | 55.0% |
| !! | TGAGAGGTTGAGGTGGTGGA+GGG | + | chr1.3:78988947-78988966 | None:intergenic | 55.0% |
| AATCCTCCAGCCAGTGGCAC+TGG | - | chr1.3:78985542-78985561 | MS.gene029082:intron | 60.0% | |
| ACACTAGCAGGCACCACAGC+AGG | + | chr1.3:78984970-78984989 | None:intergenic | 60.0% | |
| AGTGGGGCTCACTATGGACC+AGG | - | chr1.3:78988091-78988110 | MS.gene029082:CDS | 60.0% | |
| CAAAGCTCCTGCGGCCTAAG+AGG | - | chr1.3:78986025-78986044 | MS.gene029082:intron | 60.0% | |
| CACCACAGCAGGTGATCCCA+CGG | + | chr1.3:78984959-78984978 | None:intergenic | 60.0% | |
| CATCAGAATCGTGGCGGCTC+CGG | + | chr1.3:78984041-78984060 | None:intergenic | 60.0% | |
| CCTGAAGAAGCTGAGGTGGC+AGG | + | chr1.3:78985482-78985501 | None:intergenic | 60.0% | |
| CCTGCCACCTCAGCTTCTTC+AGG | - | chr1.3:78985479-78985498 | MS.gene029082:intron | 60.0% | |
| GCTCACTATGGACCAGGTGC+TGG | - | chr1.3:78988097-78988116 | MS.gene029082:CDS | 60.0% | |
| GGAAGCAGAGACAGGGAGAG+GGG | - | chr1.3:78984108-78984127 | MS.gene029082:CDS | 60.0% | |
| GGCGGTGGTCATCAGAATCG+TGG | + | chr1.3:78984050-78984069 | None:intergenic | 60.0% | |
| GGCTCAGCAGGCGGTTCAAT+AGG | + | chr1.3:78988921-78988940 | None:intergenic | 60.0% | |
| TAGGACCAGGTACCAGCACC+TGG | + | chr1.3:78988112-78988131 | None:intergenic | 60.0% | |
| TGCTGTGGTGCCTGCTAGTG+TGG | - | chr1.3:78984969-78984988 | MS.gene029082:intron | 60.0% | |
| ! | GCCCTCTCTTAGTGCTGGAG+TGG | - | chr1.3:78985448-78985467 | MS.gene029082:intron | 60.0% |
| !! | ATGGACCAGGTGCTGGTACC+TGG | - | chr1.3:78988104-78988123 | MS.gene029082:CDS | 60.0% |
| !! | CAGGAGCTTGCTGCCAGGAT+GGG | - | chr1.3:78985614-78985633 | MS.gene029082:intron | 60.0% |
| !! | CGAGCGCTGGTTGCTTGCTA+TGG | - | chr1.3:78987196-78987215 | MS.gene029082:intron | 60.0% |
| !! | CTGTTTCAGGGCGTTGCCGT+GGG | - | chr1.3:78984940-78984959 | MS.gene029082:intron | 60.0% |
| !! | GAGAGGTTGAGGTGGTGGAG+GGG | + | chr1.3:78988946-78988965 | None:intergenic | 60.0% |
| !! | GGTCAGATCGATGATGGCGG+TGG | + | chr1.3:78984065-78984084 | None:intergenic | 60.0% |
| !! | TCAGGAGCTTGCTGCCAGGA+TGG | - | chr1.3:78985613-78985632 | MS.gene029082:intron | 60.0% |
| AATCGTGGCGGCTCCGGTGA+TGG | + | chr1.3:78984035-78984054 | None:intergenic | 65.0% | |
| ACCGCGACCGTAGCCATCAC+CGG | - | chr1.3:78984019-78984038 | MS.gene029082:CDS | 65.0% | |
| AGCGGGCCTTGGGATGAGAG+AGG | + | chr1.3:78989307-78989326 | None:intergenic | 65.0% | |
| GCAGGCGGTTCAATAGGCCG+AGG | + | chr1.3:78988915-78988934 | None:intergenic | 65.0% | |
| GCTACGGTCGCGGTCACGTT+CGG | + | chr1.3:78984013-78984032 | None:intergenic | 65.0% | |
| TGCAGCTGCTGAGCGTGAGC+AGG | - | chr1.3:78989157-78989176 | MS.gene029082:intron | 65.0% | |
| TGCCGTGGGATCACCTGCTG+TGG | - | chr1.3:78984954-78984973 | MS.gene029082:intron | 65.0% | |
| ! | TCCGGTGATGGCTACGGTCG+CGG | + | chr1.3:78984023-78984042 | None:intergenic | 65.0% |
| !! | ACCAGGAGCACCAGTGCCAC+TGG | + | chr1.3:78985555-78985574 | None:intergenic | 65.0% |
| !! | GCTGTTTCAGGGCGTTGCCG+TGG | - | chr1.3:78984939-78984958 | MS.gene029082:intron | 65.0% |
| !! | GTGCTCAGGAGCTTGCTGCC+AGG | - | chr1.3:78985609-78985628 | MS.gene029082:intron | 65.0% |
| ! | GCACCAGTGCCACTGGCTGG+AGG | + | chr1.3:78985548-78985567 | None:intergenic | 70.0% |
| ! | GGAGCACCAGTGCCACTGGC+TGG | + | chr1.3:78985551-78985570 | None:intergenic | 70.0% |
| ! | GGCGGCTCCGGTGATGGCTA+CGG | + | chr1.3:78984029-78984048 | None:intergenic | 70.0% |
| !! | GCCAGTGGCACTGGTGCTCC+TGG | - | chr1.3:78985551-78985570 | MS.gene029082:intron | 70.0% |
| !! | GGTTGAGGTGGTGGAGGGGC+AGG | + | chr1.3:78988942-78988961 | None:intergenic | 70.0% |
| GGAGGGGCAGGCTCAGCAGG+CGG | + | chr1.3:78988930-78988949 | None:intergenic | 75.0% | |
| GGTGGAGGGGCAGGCTCAGC+AGG | + | chr1.3:78988933-78988952 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 78983964 | 78989691 | 78983964 | ID=MS.gene029082 |
| chr1.3 | mRNA | 78983964 | 78989691 | 78983964 | ID=MS.gene029082.t1;Parent=MS.gene029082 |
| chr1.3 | exon | 78989233 | 78989691 | 78989233 | ID=MS.gene029082.t1.exon1;Parent=MS.gene029082.t1 |
| chr1.3 | CDS | 78989233 | 78989691 | 78989233 | ID=cds.MS.gene029082.t1;Parent=MS.gene029082.t1 |
| chr1.3 | exon | 78988419 | 78988706 | 78988419 | ID=MS.gene029082.t1.exon2;Parent=MS.gene029082.t1 |
| chr1.3 | CDS | 78988419 | 78988706 | 78988419 | ID=cds.MS.gene029082.t1;Parent=MS.gene029082.t1 |
| chr1.3 | exon | 78987829 | 78988275 | 78987829 | ID=MS.gene029082.t1.exon3;Parent=MS.gene029082.t1 |
| chr1.3 | CDS | 78987829 | 78988275 | 78987829 | ID=cds.MS.gene029082.t1;Parent=MS.gene029082.t1 |
| chr1.3 | exon | 78987545 | 78987739 | 78987545 | ID=MS.gene029082.t1.exon4;Parent=MS.gene029082.t1 |
| chr1.3 | CDS | 78987545 | 78987739 | 78987545 | ID=cds.MS.gene029082.t1;Parent=MS.gene029082.t1 |
| chr1.3 | exon | 78987276 | 78987436 | 78987276 | ID=MS.gene029082.t1.exon5;Parent=MS.gene029082.t1 |
| chr1.3 | CDS | 78987276 | 78987436 | 78987276 | ID=cds.MS.gene029082.t1;Parent=MS.gene029082.t1 |
| chr1.3 | exon | 78983964 | 78984846 | 78983964 | ID=MS.gene029082.t1.exon6;Parent=MS.gene029082.t1 |
| chr1.3 | CDS | 78983964 | 78984846 | 78983964 | ID=cds.MS.gene029082.t1;Parent=MS.gene029082.t1 |
| Gene Sequence |
| Protein sequence |
