Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043867.t1 | AES63022.2 | 78.4 | 685 | 43 | 10 | 114 | 697 | 154 | 834 | 9.30E-259 | 902.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043867.t1 | Q9C7E7 | 55.0 | 654 | 215 | 13 | 114 | 694 | 139 | 786 | 1.1e-162 | 575.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043867.t1 | G7IF06 | 78.4 | 685 | 43 | 10 | 114 | 697 | 154 | 834 | 6.7e-259 | 902.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043867.t1 | MTR_1g115920 | 93.319 | 464 | 24 | 2 | 240 | 697 | 372 | 834 | 0.0 | 806 |
MS.gene043867.t1 | MTR_1g115920 | 71.525 | 295 | 36 | 12 | 5 | 257 | 28 | 316 | 2.71e-100 | 327 |
MS.gene043867.t1 | MTR_4g094355 | 89.005 | 191 | 18 | 1 | 510 | 697 | 250 | 440 | 2.54e-113 | 348 |
MS.gene043867.t1 | MTR_4g094355 | 80.083 | 241 | 14 | 2 | 186 | 426 | 45 | 251 | 3.90e-112 | 345 |
MS.gene043867.t1 | MTR_4g094355 | 80.851 | 47 | 7 | 1 | 60 | 106 | 2 | 46 | 6.02e-12 | 68.9 |
MS.gene043867.t1 | MTR_5g039050 | 85.202 | 223 | 24 | 3 | 390 | 612 | 67 | 280 | 1.10e-109 | 338 |
MS.gene043867.t1 | MTR_5g039050 | 82.222 | 45 | 7 | 1 | 252 | 295 | 6 | 50 | 4.88e-14 | 75.1 |
MS.gene043867.t1 | MTR_5g039100 | 61.574 | 216 | 32 | 8 | 19 | 211 | 7 | 194 | 6.52e-59 | 197 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043867.t1 | AT1G28060 | 50.643 | 778 | 259 | 18 | 30 | 694 | 21 | 786 | 0.0 | 624 |
MS.gene043867.t1 | AT1G28060 | 50.643 | 778 | 259 | 18 | 30 | 694 | 21 | 786 | 0.0 | 624 |
MS.gene043867.t1 | AT1G28060 | 50.643 | 778 | 259 | 18 | 30 | 694 | 21 | 786 | 0.0 | 624 |
MS.gene043867.t1 | AT3G55930 | 62.214 | 262 | 96 | 3 | 433 | 691 | 9 | 270 | 3.80e-97 | 300 |
MS.gene043867.t1 | AT3G56790 | 68.333 | 60 | 18 | 1 | 458 | 516 | 144 | 203 | 1.39e-11 | 65.1 |
Find 189 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCACACCAGAACACATTTAT+TGG | 0.127318 | 2.4:+31324798 | None:intergenic |
ATAAAATTGAAGAGTAAATT+TGG | 0.190886 | 2.4:-31325669 | MS.gene043867:CDS |
CTCATCTTGACCTTTGGTTT+TGG | 0.219944 | 2.4:+31325237 | None:intergenic |
TGCTGGGGTTCCTCATTATT+GGG | 0.233213 | 2.4:-31324689 | MS.gene043867:CDS |
AATTGGATGATAAGAGAATT+AGG | 0.237950 | 2.4:-31326478 | MS.gene043867:CDS |
ATGCTGGGGTTCCTCATTAT+TGG | 0.242299 | 2.4:-31324690 | MS.gene043867:CDS |
CTTCTGCATTCTGGAAATTA+TGG | 0.253483 | 2.4:-31325486 | MS.gene043867:CDS |
ACAGGTGTGTCCAATGTATT+TGG | 0.256768 | 2.4:+31325042 | None:intergenic |
CCCTGTCTCTGCTTCCTTCT+CGG | 0.262332 | 2.4:+31326621 | None:intergenic |
TGATGAATGCAAACTGAAAA+TGG | 0.271409 | 2.4:-31325439 | MS.gene043867:CDS |
ACACACCTGTCTCACTTTAC+AGG | 0.272620 | 2.4:-31325029 | MS.gene043867:CDS |
CTTTGCTAGCTGTGCTTGTT+TGG | 0.291419 | 2.4:+31325620 | None:intergenic |
CTCCTTAGCTATACGCCTTT+GGG | 0.294775 | 2.4:+31325302 | None:intergenic |
CTCGGTCTTCTCTGTGATTC+CGG | 0.301582 | 2.4:+31326639 | None:intergenic |
CTGCTCCTGTTTAGTTAGCT+TGG | 0.303650 | 2.4:+31325338 | None:intergenic |
ACGTCCCACCACTCAATATC+TGG | 0.306527 | 2.4:+31325513 | None:intergenic |
TCTCCTTAGCTATACGCCTT+TGG | 0.307916 | 2.4:+31325301 | None:intergenic |
TTGGGAGGTTGAGGTGGTGG+AGG | 0.312517 | 2.4:+31325357 | None:intergenic |
TACTACTACAATTGAAAATC+AGG | 0.316128 | 2.4:-31326243 | MS.gene043867:CDS |
AAGCAACCTTAGCACATTAA+AGG | 0.318390 | 2.4:-31325874 | MS.gene043867:CDS |
TGCTCCTGTTTAGTTAGCTT+GGG | 0.318790 | 2.4:+31325339 | None:intergenic |
CGTGAAGTGTTTGTGGATGC+TGG | 0.322935 | 2.4:-31324706 | MS.gene043867:CDS |
CACCACTCAATATCTGGAAT+TGG | 0.327730 | 2.4:+31325519 | None:intergenic |
GGTGGAGGGGCGGGCTCAGC+AGG | 0.333316 | 2.4:+31325372 | None:intergenic |
GACGTGGCACTTCTGCATTC+TGG | 0.335270 | 2.4:-31325495 | MS.gene043867:CDS |
AGCTTGGGAGGTTGAGGTGG+TGG | 0.339497 | 2.4:+31325354 | None:intergenic |
GTTCATCTATTTCACGTCCC+TGG | 0.343803 | 2.4:+31325925 | None:intergenic |
ATGATAAGAGAATTAGGGTT+AGG | 0.350518 | 2.4:-31326472 | MS.gene043867:CDS |
TCAAAATGAGGATTAGATTC+AGG | 0.353354 | 2.4:+31325789 | None:intergenic |
TGAAATACTAAAACCTGTAT+TGG | 0.355353 | 2.4:-31325820 | MS.gene043867:CDS |
GAACCTATTGAAGCTCGATT+TGG | 0.361063 | 2.4:+31324762 | None:intergenic |
ATCAACTCTATAGCGGGCCT+TGG | 0.361133 | 2.4:+31324987 | None:intergenic |
AAGAAGGAACGTAGGAGATT+TGG | 0.374683 | 2.4:-31326437 | MS.gene043867:CDS |
AAATTACTCATCTTGACCTT+TGG | 0.381357 | 2.4:+31325231 | None:intergenic |
ATTGGATGATAAGAGAATTA+GGG | 0.389557 | 2.4:-31326477 | MS.gene043867:CDS |
GGTTGAGGTGGTGGAGGGGC+GGG | 0.389700 | 2.4:+31325363 | None:intergenic |
TGTTTGTGGAGGAAGGAAAA+TGG | 0.392737 | 2.4:-31325710 | MS.gene043867:CDS |
AGGTTGAGGTGGTGGAGGGG+CGG | 0.392897 | 2.4:+31325362 | None:intergenic |
TTTGTAATTTCTATTAAGTT+CGG | 0.393587 | 2.4:+31325573 | None:intergenic |
GTTCAGTCTCATGAGGATTC+TGG | 0.400470 | 2.4:-31326218 | MS.gene043867:CDS |
TCTACAACTGCTGGAAAACT+TGG | 0.400509 | 2.4:-31326182 | MS.gene043867:CDS |
AGCAAGTCAATTAAGAGGTA+TGG | 0.404160 | 2.4:-31324886 | MS.gene043867:CDS |
TAGTGTGGCTCTGACATCTT+TGG | 0.404372 | 2.4:-31326303 | MS.gene043867:CDS |
TTCTTCTCACGCAGCTCAGC+AGG | 0.405655 | 2.4:+31325087 | None:intergenic |
TTGCCAAATCGAGCTTCAAT+AGG | 0.406342 | 2.4:-31324765 | MS.gene043867:CDS |
TGCAGCTGCTGAGCGTGAGC+AGG | 0.412035 | 2.4:-31325145 | MS.gene043867:CDS |
TCGATCTCTGTTTCGCCTAT+CGG | 0.413474 | 2.4:+31326697 | None:intergenic |
TTCATCTATTTCACGTCCCT+GGG | 0.414957 | 2.4:+31325926 | None:intergenic |
TGATAATGAGGCTAGGGTTA+AGG | 0.417089 | 2.4:-31326384 | MS.gene043867:CDS |
ATTAGTGTTGTTGTGGTTGA+AGG | 0.421250 | 2.4:-31324913 | MS.gene043867:CDS |
GAATCTACAGCTATGTTTCC+TGG | 0.422589 | 2.4:-31326017 | MS.gene043867:CDS |
TTCCTCTTATGCGAGGAGTA+TGG | 0.424460 | 2.4:+31326527 | None:intergenic |
CACCATACTCCTCGCATAAG+AGG | 0.428130 | 2.4:-31326529 | MS.gene043867:CDS |
ACCGAGAAGGAAGCAGAGAC+AGG | 0.430015 | 2.4:-31326622 | MS.gene043867:CDS |
TTTAATGTGCTAAGGTTGCT+TGG | 0.430099 | 2.4:+31325876 | None:intergenic |
ACATAGCTATGATCGGGAAT+TGG | 0.430206 | 2.4:-31326495 | MS.gene043867:CDS |
GGCTCAGCAGGCGGTTCAAT+AGG | 0.433119 | 2.4:+31325384 | None:intergenic |
CAAAGCTCCTGCGGCCTAAG+AGG | 0.436122 | 2.4:-31325743 | MS.gene043867:CDS |
TAACGTCTGGTGTAGCAATC+TGG | 0.436715 | 2.4:+31325994 | None:intergenic |
ACCTCCCAAGCTAACTAAAC+AGG | 0.443090 | 2.4:-31325343 | MS.gene043867:CDS |
TTATGCGTAGACGTATTGAT+TGG | 0.448965 | 2.4:-31324858 | MS.gene043867:CDS |
AACAGAAAATTCATCCTCTT+AGG | 0.449563 | 2.4:+31325729 | None:intergenic |
CGCCTTCTTAGCCTTTGCTA+AGG | 0.450874 | 2.4:+31326139 | None:intergenic |
GGAGGGGCGGGCTCAGCAGG+CGG | 0.453459 | 2.4:+31325375 | None:intergenic |
TGATAAGAGAATTAGGGTTA+GGG | 0.455771 | 2.4:-31326471 | MS.gene043867:CDS |
AGTAATTTACATAAGGTACT+AGG | 0.456676 | 2.4:-31325216 | MS.gene043867:CDS |
GTGAAGTGTTTGTGGATGCT+GGG | 0.458044 | 2.4:-31324705 | MS.gene043867:CDS |
AGATGCCAATAAATGTGTTC+TGG | 0.462586 | 2.4:-31324803 | MS.gene043867:CDS |
TGTTCTTCGTCTTGACGCCC+AGG | 0.463631 | 2.4:-31325943 | MS.gene043867:CDS |
GGGTCATCATCTACAACTGC+TGG | 0.466544 | 2.4:-31326191 | MS.gene043867:CDS |
TGGGAGGTTGAGGTGGTGGA+GGG | 0.468936 | 2.4:+31325358 | None:intergenic |
TCAGGATTGACATCCAATAC+AGG | 0.470166 | 2.4:+31325807 | None:intergenic |
GCTCAAGAAAATCGTTTGAC+TGG | 0.472903 | 2.4:-31324958 | MS.gene043867:CDS |
GGGAGGTTGAGGTGGTGGAG+GGG | 0.473436 | 2.4:+31325359 | None:intergenic |
TGCTGAGCTGCGTGAGAAGA+AGG | 0.474449 | 2.4:-31325085 | MS.gene043867:CDS |
ACCACTCAATATCTGGAATT+GGG | 0.474879 | 2.4:+31325520 | None:intergenic |
CGAAGAACAGGAACCTTGGT+TGG | 0.478730 | 2.4:+31325957 | None:intergenic |
AGGAAGCAGAGACAGGGATA+GGG | 0.480678 | 2.4:-31326615 | MS.gene043867:CDS |
TCTCATGAGGATTCTGGAGA+TGG | 0.484386 | 2.4:-31326212 | MS.gene043867:CDS |
TTAGTTAGCTTGGGAGGTTG+AGG | 0.485289 | 2.4:+31325348 | None:intergenic |
GTGAGCAGGCTCACATAGAT+AGG | 0.485650 | 2.4:-31325131 | MS.gene043867:CDS |
GAGGAAGTTACTATTACTAA+TGG | 0.487185 | 2.4:-31326362 | MS.gene043867:CDS |
AGCTGCTCGTGAAGTGTTTG+TGG | 0.491618 | 2.4:-31324713 | MS.gene043867:CDS |
TAGGGTTTCTGAAGCAAAGA+AGG | 0.491982 | 2.4:-31326453 | MS.gene043867:CDS |
CCTCTGTATAGTTGACAGCT+TGG | 0.492819 | 2.4:+31324665 | None:intergenic |
GTTAGCTTGGGAGGTTGAGG+TGG | 0.493935 | 2.4:+31325351 | None:intergenic |
AGATCCCACCCGGCTCGAAA+AGG | 0.494619 | 2.4:-31325178 | MS.gene043867:CDS |
AGCTAAGGAGAAAGAGCGAC+AGG | 0.494652 | 2.4:-31325289 | MS.gene043867:CDS |
GCGACAGGAGATGATTAGAC+AGG | 0.494709 | 2.4:-31325274 | MS.gene043867:CDS |
TCCTCCTTCCTTTCCTACCA+AGG | 0.496795 | 2.4:-31326276 | MS.gene043867:CDS |
CAAGATGAGTAATTTACATA+AGG | 0.497213 | 2.4:-31325223 | MS.gene043867:CDS |
AAGGAAGCAGAGACAGGGAT+AGG | 0.502299 | 2.4:-31326616 | MS.gene043867:CDS |
GGAAGCAGAGACAGGGATAG+GGG | 0.504631 | 2.4:-31326614 | MS.gene043867:CDS |
ATGATGGTTACGGTCGCGTT+CGG | 0.505699 | 2.4:+31326670 | None:intergenic |
GGAACCTTGGTTGGTTTCTG+AGG | 0.507895 | 2.4:+31325966 | None:intergenic |
TTCACAAGAAAGCACACAGT+TGG | 0.508164 | 2.4:-31326051 | MS.gene043867:CDS |
TGGGCGTCAAGACGAAGAAC+AGG | 0.509477 | 2.4:+31325945 | None:intergenic |
GCAAGTCAATTAAGAGGTAT+GGG | 0.512247 | 2.4:-31324885 | MS.gene043867:CDS |
TCAACTCTATAGCGGGCCTT+GGG | 0.512863 | 2.4:+31324988 | None:intergenic |
TCCTGTTTAGTTAGCTTGGG+AGG | 0.513523 | 2.4:+31325342 | None:intergenic |
CAGGTGTGTCCAATGTATTT+GGG | 0.514012 | 2.4:+31325043 | None:intergenic |
TTTACCCTGTAAAGTGAGAC+AGG | 0.519082 | 2.4:+31325024 | None:intergenic |
TCACAAGAAAGCACACAGTT+GGG | 0.520179 | 2.4:-31326050 | MS.gene043867:CDS |
TGATGGTATTAGTGTTGTTG+TGG | 0.521019 | 2.4:-31324920 | MS.gene043867:CDS |
CGAAGATACCTTGGTAGGAA+AGG | 0.521337 | 2.4:+31326268 | None:intergenic |
GTGGAAGCAAGTCAATTAAG+AGG | 0.522404 | 2.4:-31324891 | MS.gene043867:CDS |
TTCATCATCTATAGTACCGT+TGG | 0.528603 | 2.4:+31325455 | None:intergenic |
TAGAGAACATAGCTATGATC+GGG | 0.530400 | 2.4:-31326501 | MS.gene043867:CDS |
TGATTGGACTGATGTTTCAA+AGG | 0.530923 | 2.4:-31324842 | MS.gene043867:CDS |
CACACCTGTCTCACTTTACA+GGG | 0.531003 | 2.4:-31325028 | MS.gene043867:CDS |
GGTCAGATCGATGATGGTTA+CGG | 0.531430 | 2.4:+31326660 | None:intergenic |
GTCAGAGCCACACTAGCAGC+AGG | 0.532669 | 2.4:+31326311 | None:intergenic |
TTCTGAGGGATAGTAACGTC+TGG | 0.532884 | 2.4:+31325981 | None:intergenic |
TGCCTTAGCAAAGGCTAAGA+AGG | 0.534221 | 2.4:-31326141 | MS.gene043867:CDS |
GACCCAAAGGCGTATAGCTA+AGG | 0.535984 | 2.4:-31325304 | MS.gene043867:CDS |
AGTGTTGTTGTGGTTGAAGG+TGG | 0.536548 | 2.4:-31324910 | MS.gene043867:CDS |
ATTATTATGATAATGAGGCT+AGG | 0.536671 | 2.4:-31326391 | MS.gene043867:CDS |
TAATGAGGCTAGGGTTAAGG+AGG | 0.542515 | 2.4:-31326381 | MS.gene043867:CDS |
AGCTCAAGCAAAAGAGCTGA+AGG | 0.543647 | 2.4:-31325643 | MS.gene043867:CDS |
TGATTATTCACGTGTTGCCG+TGG | 0.545488 | 2.4:-31326339 | MS.gene043867:CDS |
GAACCTTGGTTGGTTTCTGA+GGG | 0.546067 | 2.4:+31325967 | None:intergenic |
AGCTGCGTGAGAAGAAGGAA+AGG | 0.547194 | 2.4:-31325080 | MS.gene043867:CDS |
ATAGAGAACATAGCTATGAT+CGG | 0.548241 | 2.4:-31326502 | MS.gene043867:CDS |
AGATATTGAGTGGTGGGACG+TGG | 0.548713 | 2.4:-31325511 | MS.gene043867:CDS |
CCCATTCTCTCATCAAAATG+AGG | 0.549338 | 2.4:+31325777 | None:intergenic |
CAAACAAGCACAGCTAGCAA+AGG | 0.555686 | 2.4:-31325619 | MS.gene043867:CDS |
GGGATCACCTGCTGCTAGTG+TGG | 0.556603 | 2.4:-31326318 | MS.gene043867:CDS |
TTATTATGATAATGAGGCTA+GGG | 0.560539 | 2.4:-31326390 | MS.gene043867:CDS |
TGTTGACCTTTAATGTGCTA+AGG | 0.561959 | 2.4:+31325868 | None:intergenic |
GTTCTTCGTCTTGACGCCCA+GGG | 0.562372 | 2.4:-31325942 | MS.gene043867:CDS |
ATTAACATCAACTCTATAGC+GGG | 0.562728 | 2.4:+31324981 | None:intergenic |
AATTCATCCTCTTAGGCCGC+AGG | 0.563858 | 2.4:+31325736 | None:intergenic |
TCTGGTGTAGCAATCTGGCC+AGG | 0.566957 | 2.4:+31325999 | None:intergenic |
AGACGATTATTATGATAATG+AGG | 0.570867 | 2.4:-31326396 | MS.gene043867:CDS |
GATACCTTGGTAGGAAAGGA+AGG | 0.574315 | 2.4:+31326272 | None:intergenic |
GATTCCGGTCAGATCGATGA+TGG | 0.577382 | 2.4:+31326654 | None:intergenic |
CTCATGAGGATTCTGGAGAT+GGG | 0.578997 | 2.4:-31326211 | MS.gene043867:CDS |
GTATTATGACCCAAATACAT+TGG | 0.579784 | 2.4:-31325052 | MS.gene043867:CDS |
GTAATTTACATAAGGTACTA+GGG | 0.581923 | 2.4:-31325215 | MS.gene043867:CDS |
ATCGAAGTGCGATGAAGAGA+GGG | 0.582378 | 2.4:-31326567 | MS.gene043867:CDS |
CCGAGAAGGAAGCAGAGACA+GGG | 0.584656 | 2.4:-31326621 | MS.gene043867:CDS |
CTCTTATGCGAGGAGTATGG+TGG | 0.584930 | 2.4:+31326530 | None:intergenic |
TTGGTAGGAAAGGAAGGAGG+AGG | 0.584935 | 2.4:+31326278 | None:intergenic |
CTAAGGCATCACTACTAGAG+AGG | 0.588190 | 2.4:+31326156 | None:intergenic |
TGGTAGGAAAGGAAGGAGGA+GGG | 0.588204 | 2.4:+31326279 | None:intergenic |
GGTAGGAAAGGAAGGAGGAG+GGG | 0.590732 | 2.4:+31326280 | None:intergenic |
AATTCCAGATATTGAGTGGT+GGG | 0.600042 | 2.4:-31325517 | MS.gene043867:CDS |
AATCGAAGTGCGATGAAGAG+AGG | 0.601185 | 2.4:-31326568 | MS.gene043867:CDS |
TGAAGAGAGGGAAGATTCAG+TGG | 0.601353 | 2.4:-31326555 | MS.gene043867:CDS |
AGTAGTAATCGAAGATACCT+TGG | 0.605884 | 2.4:+31326259 | None:intergenic |
GGACGTGAAATAGATGAACA+TGG | 0.606106 | 2.4:-31325921 | MS.gene043867:CDS |
TCTATCTTTCCTCTTATGCG+AGG | 0.606208 | 2.4:+31326520 | None:intergenic |
CGACAGGAGATGATTAGACA+GGG | 0.610803 | 2.4:-31325273 | MS.gene043867:CDS |
AAGACGAAGAACAGGAACCT+TGG | 0.611050 | 2.4:+31325953 | None:intergenic |
GATTATTCACGTGTTGCCGT+GGG | 0.611853 | 2.4:-31326338 | MS.gene043867:CDS |
AAATGACCTCTCTCATCCCA+AGG | 0.616566 | 2.4:-31325004 | MS.gene043867:CDS |
GGATGTGCGGTGATTTGTGA+TGG | 0.616908 | 2.4:-31324937 | MS.gene043867:CDS |
ACAGCTTGGTCCCAATAATG+AGG | 0.617442 | 2.4:+31324679 | None:intergenic |
ACTACTACAATTGAAAATCA+GGG | 0.618705 | 2.4:-31326242 | MS.gene043867:CDS |
TAGTAGTGATGCCTTAGCAA+AGG | 0.620911 | 2.4:-31326150 | MS.gene043867:CDS |
AGCACAGCTAGCAAAGGCAA+AGG | 0.626359 | 2.4:-31325613 | MS.gene043867:CDS |
CAATTCCAGATATTGAGTGG+TGG | 0.626915 | 2.4:-31325518 | MS.gene043867:CDS |
GCAGGCGGTTCAATAGGCCG+AGG | 0.628346 | 2.4:+31325390 | None:intergenic |
CCAATAAATGTGTTCTGGTG+TGG | 0.635559 | 2.4:-31324798 | MS.gene043867:CDS |
GTAACCATCATCGATCTGAC+CGG | 0.636471 | 2.4:-31326658 | MS.gene043867:CDS |
ACTAGCAGCAGGTGATCCCA+CGG | 0.637646 | 2.4:+31326322 | None:intergenic |
GAATTTGAGTTATTCAACTG+AGG | 0.639060 | 2.4:+31326071 | None:intergenic |
AGCGGGCCTTGGGATGAGAG+AGG | 0.647591 | 2.4:+31324998 | None:intergenic |
GGGGATACGATAGCAAAGGT+AGG | 0.651424 | 2.4:-31326595 | MS.gene043867:CDS |
ACCCAATTCCAGATATTGAG+TGG | 0.652195 | 2.4:-31325521 | MS.gene043867:CDS |
CTTAGCAAAGGCTAAGAAGG+CGG | 0.652364 | 2.4:-31326138 | MS.gene043867:CDS |
GAGAGAGAGACAAATCCGAT+AGG | 0.653845 | 2.4:-31326712 | MS.gene043867:CDS |
GTAATCGAAGATACCTTGGT+AGG | 0.655300 | 2.4:+31326263 | None:intergenic |
AAATGTGTTCTGGTGTGGCA+AGG | 0.657323 | 2.4:-31324793 | MS.gene043867:CDS |
TCAGGGCGTTCAGTCTCATG+AGG | 0.657851 | 2.4:-31326225 | MS.gene043867:CDS |
TGAAGTGTTTGTGGATGCTG+GGG | 0.659104 | 2.4:-31324704 | MS.gene043867:CDS |
CATAGAACCTCCAAAACCAA+AGG | 0.659248 | 2.4:-31325247 | MS.gene043867:CDS |
GATAGGGGATACGATAGCAA+AGG | 0.660096 | 2.4:-31326599 | MS.gene043867:CDS |
GACGTGAAATAGATGAACAT+GGG | 0.662083 | 2.4:-31325920 | MS.gene043867:CDS |
AATTATGGTGACATTGCCAA+CGG | 0.664930 | 2.4:-31325471 | MS.gene043867:CDS |
AATCACAGAGAAGACCGAGA+AGG | 0.670001 | 2.4:-31326635 | MS.gene043867:CDS |
CTGAAGCAAAGAAGGAACGT+AGG | 0.673233 | 2.4:-31326445 | MS.gene043867:CDS |
CATTAACATCAACTCTATAG+CGG | 0.679052 | 2.4:+31324980 | None:intergenic |
TCGACAAAACAAAGCTCCTG+CGG | 0.696622 | 2.4:-31325752 | MS.gene043867:CDS |
AAGCAACTCAAGATCCCACC+CGG | 0.703568 | 2.4:-31325188 | MS.gene043867:CDS |
AAATCGTTTGACTGGATGTG+CGG | 0.704841 | 2.4:-31324950 | MS.gene043867:CDS |
ACCTTGGTAGGAAAGGAAGG+AGG | 0.710617 | 2.4:+31326275 | None:intergenic |
CCAAGCTGTCAACTATACAG+AGG | 0.726035 | 2.4:-31324665 | MS.gene043867:CDS |
TATCCCTCAGAAACCAACCA+AGG | 0.735568 | 2.4:-31325970 | MS.gene043867:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAAATTGAAGAGTAAATT+TGG | - | chr2.4:31325704-31325723 | MS.gene043867:CDS | 15.0% |
!! | TTTGTAATTTCTATTAAGTT+CGG | + | chr2.4:31325803-31325822 | None:intergenic | 15.0% |
! | AATTGGATGATAAGAGAATT+AGG | - | chr2.4:31324895-31324914 | MS.gene043867:CDS | 25.0% |
! | ACTACTACAATTGAAAATCA+GGG | - | chr2.4:31325131-31325150 | MS.gene043867:CDS | 25.0% |
! | ATTGGATGATAAGAGAATTA+GGG | - | chr2.4:31324896-31324915 | MS.gene043867:CDS | 25.0% |
! | CAAGATGAGTAATTTACATA+AGG | - | chr2.4:31326150-31326169 | MS.gene043867:CDS | 25.0% |
! | TACTACTACAATTGAAAATC+AGG | - | chr2.4:31325130-31325149 | MS.gene043867:CDS | 25.0% |
! | TGAAATACTAAAACCTGTAT+TGG | - | chr2.4:31325553-31325572 | MS.gene043867:CDS | 25.0% |
! | TGTAATGAAAGAAAAACTGA+CGG | - | chr2.4:31325829-31325848 | MS.gene043867:CDS | 25.0% |
!! | AGACGATTATTATGATAATG+AGG | - | chr2.4:31324977-31324996 | MS.gene043867:CDS | 25.0% |
!! | AGTAATTTACATAAGGTACT+AGG | - | chr2.4:31326157-31326176 | MS.gene043867:CDS | 25.0% |
!! | ATTATTATGATAATGAGGCT+AGG | - | chr2.4:31324982-31325001 | MS.gene043867:CDS | 25.0% |
!! | GGAAAAATTCAACTTTTATG+TGG | - | chr2.4:31325955-31325974 | MS.gene043867:CDS | 25.0% |
!! | GTAATTTACATAAGGTACTA+GGG | - | chr2.4:31326158-31326177 | MS.gene043867:CDS | 25.0% |
!! | TTATTATGATAATGAGGCTA+GGG | - | chr2.4:31324983-31325002 | MS.gene043867:CDS | 25.0% |
AAATTACTCATCTTGACCTT+TGG | + | chr2.4:31326145-31326164 | None:intergenic | 30.0% | |
AACAGAAAATTCATCCTCTT+AGG | + | chr2.4:31325647-31325666 | None:intergenic | 30.0% | |
ATAGAGAACATAGCTATGAT+CGG | - | chr2.4:31324871-31324890 | MS.gene043867:CDS | 30.0% | |
ATGATAAGAGAATTAGGGTT+AGG | - | chr2.4:31324901-31324920 | MS.gene043867:CDS | 30.0% | |
ATTAACATCAACTCTATAGC+GGG | + | chr2.4:31326395-31326414 | None:intergenic | 30.0% | |
CATTAACATCAACTCTATAG+CGG | + | chr2.4:31326396-31326415 | None:intergenic | 30.0% | |
GAGGAAGTTACTATTACTAA+TGG | - | chr2.4:31325011-31325030 | MS.gene043867:CDS | 30.0% | |
GTATTATGACCCAAATACAT+TGG | - | chr2.4:31326321-31326340 | MS.gene043867:CDS | 30.0% | |
TCAAAATGAGGATTAGATTC+AGG | + | chr2.4:31325587-31325606 | None:intergenic | 30.0% | |
TGATAAGAGAATTAGGGTTA+GGG | - | chr2.4:31324902-31324921 | MS.gene043867:CDS | 30.0% | |
TGATGAATGCAAACTGAAAA+TGG | - | chr2.4:31325934-31325953 | MS.gene043867:CDS | 30.0% | |
! | GAATTTGAGTTATTCAACTG+AGG | + | chr2.4:31325305-31325324 | None:intergenic | 30.0% |
AACAGGAGCAGAAAAAACTA+AGG | - | chr2.4:31326047-31326066 | MS.gene043867:CDS | 35.0% | |
AAGCAACCTTAGCACATTAA+AGG | - | chr2.4:31325499-31325518 | MS.gene043867:CDS | 35.0% | |
AATTATGGTGACATTGCCAA+CGG | - | chr2.4:31325902-31325921 | MS.gene043867:CDS | 35.0% | |
AATTCCAGATATTGAGTGGT+GGG | - | chr2.4:31325856-31325875 | MS.gene043867:CDS | 35.0% | |
AGAAAAAACTAAGGACCCAA+AGG | - | chr2.4:31326056-31326075 | MS.gene043867:CDS | 35.0% | |
AGATGCCAATAAATGTGTTC+TGG | - | chr2.4:31326570-31326589 | MS.gene043867:CDS | 35.0% | |
AGCAAGTCAATTAAGAGGTA+TGG | - | chr2.4:31326487-31326506 | MS.gene043867:CDS | 35.0% | |
AGTAGTAATCGAAGATACCT+TGG | + | chr2.4:31325117-31325136 | None:intergenic | 35.0% | |
GACGTGAAATAGATGAACAT+GGG | - | chr2.4:31325453-31325472 | MS.gene043867:CDS | 35.0% | |
TAGAGAACATAGCTATGATC+GGG | - | chr2.4:31324872-31324891 | MS.gene043867:CDS | 35.0% | |
TGATTGGACTGATGTTTCAA+AGG | - | chr2.4:31326531-31326550 | MS.gene043867:CDS | 35.0% | |
TGTTGACCTTTAATGTGCTA+AGG | + | chr2.4:31325508-31325527 | None:intergenic | 35.0% | |
TTCATCATCTATAGTACCGT+TGG | + | chr2.4:31325921-31325940 | None:intergenic | 35.0% | |
TTTAATGTGCTAAGGTTGCT+TGG | + | chr2.4:31325500-31325519 | None:intergenic | 35.0% | |
! | AATTTTCTGTTTGTGGAGGA+AGG | - | chr2.4:31325656-31325675 | MS.gene043867:CDS | 35.0% |
! | ACCACTCAATATCTGGAATT+GGG | + | chr2.4:31325856-31325875 | None:intergenic | 35.0% |
! | ACTTTTATGTGGAACATCCT+CGG | - | chr2.4:31325966-31325985 | MS.gene043867:CDS | 35.0% |
! | ATTAGTGTTGTTGTGGTTGA+AGG | - | chr2.4:31326460-31326479 | MS.gene043867:CDS | 35.0% |
! | CTTCTGCATTCTGGAAATTA+TGG | - | chr2.4:31325887-31325906 | MS.gene043867:CDS | 35.0% |
! | GAGGATGAATTTTCTGTTTG+TGG | - | chr2.4:31325649-31325668 | MS.gene043867:CDS | 35.0% |
! | GATGAATTTTCTGTTTGTGG+AGG | - | chr2.4:31325652-31325671 | MS.gene043867:CDS | 35.0% |
! | GCAAGTCAATTAAGAGGTAT+GGG | - | chr2.4:31326488-31326507 | MS.gene043867:CDS | 35.0% |
! | TGATGGTATTAGTGTTGTTG+TGG | - | chr2.4:31326453-31326472 | MS.gene043867:CDS | 35.0% |
! | TTATGCGTAGACGTATTGAT+TGG | - | chr2.4:31326515-31326534 | MS.gene043867:CDS | 35.0% |
!! | CCTCATTTTGATGAGAGAAT+GGG | - | chr2.4:31325596-31325615 | MS.gene043867:CDS | 35.0% |
!! | TCCTCATTTTGATGAGAGAA+TGG | - | chr2.4:31325595-31325614 | MS.gene043867:CDS | 35.0% |
AAATCGTTTGACTGGATGTG+CGG | - | chr2.4:31326423-31326442 | MS.gene043867:CDS | 40.0% | |
AAGAAGGAACGTAGGAGATT+TGG | - | chr2.4:31324936-31324955 | MS.gene043867:CDS | 40.0% | |
ACAGGTGTGTCCAATGTATT+TGG | + | chr2.4:31326334-31326353 | None:intergenic | 40.0% | |
ACATAGCTATGATCGGGAAT+TGG | - | chr2.4:31324878-31324897 | MS.gene043867:CDS | 40.0% | |
ACCCAATTCCAGATATTGAG+TGG | - | chr2.4:31325852-31325871 | MS.gene043867:CDS | 40.0% | |
CAATTCCAGATATTGAGTGG+TGG | - | chr2.4:31325855-31325874 | MS.gene043867:CDS | 40.0% | |
CAGGTGTGTCCAATGTATTT+GGG | + | chr2.4:31326333-31326352 | None:intergenic | 40.0% | |
CATAGAACCTCCAAAACCAA+AGG | - | chr2.4:31326126-31326145 | MS.gene043867:CDS | 40.0% | |
CCAATAAATGTGTTCTGGTG+TGG | - | chr2.4:31326575-31326594 | MS.gene043867:CDS | 40.0% | |
CCACACCAGAACACATTTAT+TGG | + | chr2.4:31326578-31326597 | None:intergenic | 40.0% | |
CCCATTCTCTCATCAAAATG+AGG | + | chr2.4:31325599-31325618 | None:intergenic | 40.0% | |
GAACCTATTGAAGCTCGATT+TGG | + | chr2.4:31326614-31326633 | None:intergenic | 40.0% | |
GAATCTACAGCTATGTTTCC+TGG | - | chr2.4:31325356-31325375 | MS.gene043867:CDS | 40.0% | |
GCTCAAGAAAATCGTTTGAC+TGG | - | chr2.4:31326415-31326434 | MS.gene043867:CDS | 40.0% | |
GGACGTGAAATAGATGAACA+TGG | - | chr2.4:31325452-31325471 | MS.gene043867:CDS | 40.0% | |
GTAATCGAAGATACCTTGGT+AGG | + | chr2.4:31325113-31325132 | None:intergenic | 40.0% | |
GTGGAAGCAAGTCAATTAAG+AGG | - | chr2.4:31326482-31326501 | MS.gene043867:CDS | 40.0% | |
TAGTAGTGATGCCTTAGCAA+AGG | - | chr2.4:31325223-31325242 | MS.gene043867:CDS | 40.0% | |
TCAGGATTGACATCCAATAC+AGG | + | chr2.4:31325569-31325588 | None:intergenic | 40.0% | |
TCTACAACTGCTGGAAAACT+TGG | - | chr2.4:31325191-31325210 | MS.gene043867:CDS | 40.0% | |
TCTATCTTTCCTCTTATGCG+AGG | + | chr2.4:31324856-31324875 | None:intergenic | 40.0% | |
TGTTTGTGGAGGAAGGAAAA+TGG | - | chr2.4:31325663-31325682 | MS.gene043867:CDS | 40.0% | |
TTCATCTATTTCACGTCCCT+GGG | + | chr2.4:31325450-31325469 | None:intergenic | 40.0% | |
TTGCCAAATCGAGCTTCAAT+AGG | - | chr2.4:31326608-31326627 | MS.gene043867:CDS | 40.0% | |
TTTACCCTGTAAAGTGAGAC+AGG | + | chr2.4:31326352-31326371 | None:intergenic | 40.0% | |
! | CACCACTCAATATCTGGAAT+TGG | + | chr2.4:31325857-31325876 | None:intergenic | 40.0% |
! | TCACAAGAAAGCACACAGTT+GGG | - | chr2.4:31325323-31325342 | MS.gene043867:CDS | 40.0% |
! | TGATAATGAGGCTAGGGTTA+AGG | - | chr2.4:31324989-31325008 | MS.gene043867:CDS | 40.0% |
! | TGCTCCTGTTTAGTTAGCTT+GGG | + | chr2.4:31326037-31326056 | None:intergenic | 40.0% |
! | TTCACAAGAAAGCACACAGT+TGG | - | chr2.4:31325322-31325341 | MS.gene043867:CDS | 40.0% |
!! | CTCATCTTGACCTTTGGTTT+TGG | + | chr2.4:31326139-31326158 | None:intergenic | 40.0% |
!! | TAGGGTTTCTGAAGCAAAGA+AGG | - | chr2.4:31324920-31324939 | MS.gene043867:CDS | 40.0% |
!!! | ATCTTGACCTTTGGTTTTGG+AGG | + | chr2.4:31326136-31326155 | None:intergenic | 40.0% |
AAATGACCTCTCTCATCCCA+AGG | - | chr2.4:31326369-31326388 | MS.gene043867:CDS | 45.0% | |
AAATGTGTTCTGGTGTGGCA+AGG | - | chr2.4:31326580-31326599 | MS.gene043867:CDS | 45.0% | |
AAGACGAAGAACAGGAACCT+TGG | + | chr2.4:31325423-31325442 | None:intergenic | 45.0% | |
AATCACAGAGAAGACCGAGA+AGG | - | chr2.4:31324738-31324757 | MS.gene043867:CDS | 45.0% | |
AATCGAAGTGCGATGAAGAG+AGG | - | chr2.4:31324805-31324824 | MS.gene043867:CDS | 45.0% | |
ACACACCTGTCTCACTTTAC+AGG | - | chr2.4:31326344-31326363 | MS.gene043867:CDS | 45.0% | |
ACAGCTTGGTCCCAATAATG+AGG | + | chr2.4:31326697-31326716 | None:intergenic | 45.0% | |
ACCTCCCAAGCTAACTAAAC+AGG | - | chr2.4:31326030-31326049 | MS.gene043867:CDS | 45.0% | |
AGCTCAAGCAAAAGAGCTGA+AGG | - | chr2.4:31325730-31325749 | MS.gene043867:CDS | 45.0% | |
ATCGAAGTGCGATGAAGAGA+GGG | - | chr2.4:31324806-31324825 | MS.gene043867:CDS | 45.0% | |
ATGCTGGGGTTCCTCATTAT+TGG | - | chr2.4:31326683-31326702 | MS.gene043867:CDS | 45.0% | |
CAAACAAGCACAGCTAGCAA+AGG | - | chr2.4:31325754-31325773 | MS.gene043867:CDS | 45.0% | |
CACACCTGTCTCACTTTACA+GGG | - | chr2.4:31326345-31326364 | MS.gene043867:CDS | 45.0% | |
CCAAGCTGTCAACTATACAG+AGG | - | chr2.4:31326708-31326727 | MS.gene043867:CDS | 45.0% | |
CCTCTGTATAGTTGACAGCT+TGG | + | chr2.4:31326711-31326730 | None:intergenic | 45.0% | |
CGAAGATACCTTGGTAGGAA+AGG | + | chr2.4:31325108-31325127 | None:intergenic | 45.0% | |
CGACAGGAGATGATTAGACA+GGG | - | chr2.4:31326100-31326119 | MS.gene043867:CDS | 45.0% | |
CTCCTTAGCTATACGCCTTT+GGG | + | chr2.4:31326074-31326093 | None:intergenic | 45.0% | |
CTGAAGCAAAGAAGGAACGT+AGG | - | chr2.4:31324928-31324947 | MS.gene043867:CDS | 45.0% | |
CTGCTCCTGTTTAGTTAGCT+TGG | + | chr2.4:31326038-31326057 | None:intergenic | 45.0% | |
CTTAGCAAAGGCTAAGAAGG+CGG | - | chr2.4:31325235-31325254 | MS.gene043867:CDS | 45.0% | |
CTTTGCTAGCTGTGCTTGTT+TGG | + | chr2.4:31325756-31325775 | None:intergenic | 45.0% | |
GAGAGAGAGACAAATCCGAT+AGG | - | chr2.4:31324661-31324680 | MS.gene043867:CDS | 45.0% | |
GATACCTTGGTAGGAAAGGA+AGG | + | chr2.4:31325104-31325123 | None:intergenic | 45.0% | |
GATAGGGGATACGATAGCAA+AGG | - | chr2.4:31324774-31324793 | MS.gene043867:CDS | 45.0% | |
GATTATTCACGTGTTGCCGT+GGG | - | chr2.4:31325035-31325054 | MS.gene043867:CDS | 45.0% | |
GTAACCATCATCGATCTGAC+CGG | - | chr2.4:31324715-31324734 | MS.gene043867:CDS | 45.0% | |
GTTCAGTCTCATGAGGATTC+TGG | - | chr2.4:31325155-31325174 | MS.gene043867:CDS | 45.0% | |
GTTCATCTATTTCACGTCCC+TGG | + | chr2.4:31325451-31325470 | None:intergenic | 45.0% | |
TAACGTCTGGTGTAGCAATC+TGG | + | chr2.4:31325382-31325401 | None:intergenic | 45.0% | |
TAATGAGGCTAGGGTTAAGG+AGG | - | chr2.4:31324992-31325011 | MS.gene043867:CDS | 45.0% | |
TATCCCTCAGAAACCAACCA+AGG | - | chr2.4:31325403-31325422 | MS.gene043867:CDS | 45.0% | |
TCGACAAAACAAAGCTCCTG+CGG | - | chr2.4:31325621-31325640 | MS.gene043867:CDS | 45.0% | |
TCGATCTCTGTTTCGCCTAT+CGG | + | chr2.4:31324679-31324698 | None:intergenic | 45.0% | |
TCTCCTTAGCTATACGCCTT+TGG | + | chr2.4:31326075-31326094 | None:intergenic | 45.0% | |
TGAAGAGAGGGAAGATTCAG+TGG | - | chr2.4:31324818-31324837 | MS.gene043867:CDS | 45.0% | |
TGATTATTCACGTGTTGCCG+TGG | - | chr2.4:31325034-31325053 | MS.gene043867:CDS | 45.0% | |
TGCCTTAGCAAAGGCTAAGA+AGG | - | chr2.4:31325232-31325251 | MS.gene043867:CDS | 45.0% | |
TGCTGGGGTTCCTCATTATT+GGG | - | chr2.4:31326684-31326703 | MS.gene043867:CDS | 45.0% | |
TTCCTCTTATGCGAGGAGTA+TGG | + | chr2.4:31324849-31324868 | None:intergenic | 45.0% | |
! | AGTGTTGTTGTGGTTGAAGG+TGG | - | chr2.4:31326463-31326482 | MS.gene043867:CDS | 45.0% |
! | CTAAGGCATCACTACTAGAG+AGG | + | chr2.4:31325220-31325239 | None:intergenic | 45.0% |
! | CTCATGAGGATTCTGGAGAT+GGG | - | chr2.4:31325162-31325181 | MS.gene043867:CDS | 45.0% |
! | GGTCAGATCGATGATGGTTA+CGG | + | chr2.4:31324716-31324735 | None:intergenic | 45.0% |
! | GTGAAGTGTTTGTGGATGCT+GGG | - | chr2.4:31326668-31326687 | MS.gene043867:CDS | 45.0% |
! | TCCTGTTTAGTTAGCTTGGG+AGG | + | chr2.4:31326034-31326053 | None:intergenic | 45.0% |
! | TCTCATGAGGATTCTGGAGA+TGG | - | chr2.4:31325161-31325180 | MS.gene043867:CDS | 45.0% |
! | TGAAGTGTTTGTGGATGCTG+GGG | - | chr2.4:31326669-31326688 | MS.gene043867:CDS | 45.0% |
! | TTAGTTAGCTTGGGAGGTTG+AGG | + | chr2.4:31326028-31326047 | None:intergenic | 45.0% |
! | TTCTGAGGGATAGTAACGTC+TGG | + | chr2.4:31325395-31325414 | None:intergenic | 45.0% |
!! | GAACCTTGGTTGGTTTCTGA+GGG | + | chr2.4:31325409-31325428 | None:intergenic | 45.0% |
!! | TACGTACTTCCTTTTCGAGC+CGG | + | chr2.4:31326207-31326226 | None:intergenic | 45.0% |
!! | TAGTGTGGCTCTGACATCTT+TGG | - | chr2.4:31325070-31325089 | MS.gene043867:CDS | 45.0% |
AAGCAACTCAAGATCCCACC+CGG | - | chr2.4:31326185-31326204 | MS.gene043867:CDS | 50.0% | |
AAGGAAGCAGAGACAGGGAT+AGG | - | chr2.4:31324757-31324776 | MS.gene043867:CDS | 50.0% | |
AATTCATCCTCTTAGGCCGC+AGG | + | chr2.4:31325640-31325659 | None:intergenic | 50.0% | |
ACCTTGGTAGGAAAGGAAGG+AGG | + | chr2.4:31325101-31325120 | None:intergenic | 50.0% | |
ACGTCCCACCACTCAATATC+TGG | + | chr2.4:31325863-31325882 | None:intergenic | 50.0% | |
AGCACAGCTAGCAAAGGCAA+AGG | - | chr2.4:31325760-31325779 | MS.gene043867:CDS | 50.0% | |
AGCTAAGGAGAAAGAGCGAC+AGG | - | chr2.4:31326084-31326103 | MS.gene043867:CDS | 50.0% | |
AGCTGCGTGAGAAGAAGGAA+AGG | - | chr2.4:31326293-31326312 | MS.gene043867:CDS | 50.0% | |
AGGAAGCAGAGACAGGGATA+GGG | - | chr2.4:31324758-31324777 | MS.gene043867:CDS | 50.0% | |
ATGATGGTTACGGTCGCGTT+CGG | + | chr2.4:31324706-31324725 | None:intergenic | 50.0% | |
CACCATACTCCTCGCATAAG+AGG | - | chr2.4:31324844-31324863 | MS.gene043867:CDS | 50.0% | |
CGAAGAACAGGAACCTTGGT+TGG | + | chr2.4:31325419-31325438 | None:intergenic | 50.0% | |
CTCGGTCTTCTCTGTGATTC+CGG | + | chr2.4:31324737-31324756 | None:intergenic | 50.0% | |
GATTCCGGTCAGATCGATGA+TGG | + | chr2.4:31324722-31324741 | None:intergenic | 50.0% | |
GCGACAGGAGATGATTAGAC+AGG | - | chr2.4:31326099-31326118 | MS.gene043867:CDS | 50.0% | |
GGGGATACGATAGCAAAGGT+AGG | - | chr2.4:31324778-31324797 | MS.gene043867:CDS | 50.0% | |
GGGTCATCATCTACAACTGC+TGG | - | chr2.4:31325182-31325201 | MS.gene043867:CDS | 50.0% | |
GTGAGCAGGCTCACATAGAT+AGG | - | chr2.4:31326242-31326261 | MS.gene043867:CDS | 50.0% | |
TCCTCCTTCCTTTCCTACCA+AGG | - | chr2.4:31325097-31325116 | MS.gene043867:CDS | 50.0% | |
TGGTAGGAAAGGAAGGAGGA+GGG | + | chr2.4:31325097-31325116 | None:intergenic | 50.0% | |
TTGGTAGGAAAGGAAGGAGG+AGG | + | chr2.4:31325098-31325117 | None:intergenic | 50.0% | |
! | AGATATTGAGTGGTGGGACG+TGG | - | chr2.4:31325862-31325881 | MS.gene043867:CDS | 50.0% |
! | AGCTGCTCGTGAAGTGTTTG+TGG | - | chr2.4:31326660-31326679 | MS.gene043867:CDS | 50.0% |
! | CGCCTTCTTAGCCTTTGCTA+AGG | + | chr2.4:31325237-31325256 | None:intergenic | 50.0% |
! | CGTGAAGTGTTTGTGGATGC+TGG | - | chr2.4:31326667-31326686 | MS.gene043867:CDS | 50.0% |
! | CTCTTATGCGAGGAGTATGG+TGG | + | chr2.4:31324846-31324865 | None:intergenic | 50.0% |
! | GACCCAAAGGCGTATAGCTA+AGG | - | chr2.4:31326069-31326088 | MS.gene043867:CDS | 50.0% |
! | GGATGTGCGGTGATTTGTGA+TGG | - | chr2.4:31326436-31326455 | MS.gene043867:CDS | 50.0% |
!! | ACGTACTTCCTTTTCGAGCC+GGG | + | chr2.4:31326206-31326225 | None:intergenic | 50.0% |
!! | ATCAACTCTATAGCGGGCCT+TGG | + | chr2.4:31326389-31326408 | None:intergenic | 50.0% |
!! | GGAACCTTGGTTGGTTTCTG+AGG | + | chr2.4:31325410-31325429 | None:intergenic | 50.0% |
!! | TCAACTCTATAGCGGGCCTT+GGG | + | chr2.4:31326388-31326407 | None:intergenic | 50.0% |
ACCGAGAAGGAAGCAGAGAC+AGG | - | chr2.4:31324751-31324770 | MS.gene043867:CDS | 55.0% | |
ACTAGCAGCAGGTGATCCCA+CGG | + | chr2.4:31325054-31325073 | None:intergenic | 55.0% | |
CCCTGTCTCTGCTTCCTTCT+CGG | + | chr2.4:31324755-31324774 | None:intergenic | 55.0% | |
CCGAGAAGGAAGCAGAGACA+GGG | - | chr2.4:31324752-31324771 | MS.gene043867:CDS | 55.0% | |
GACGTGGCACTTCTGCATTC+TGG | - | chr2.4:31325878-31325897 | MS.gene043867:CDS | 55.0% | |
GGAAGCAGAGACAGGGATAG+GGG | - | chr2.4:31324759-31324778 | MS.gene043867:CDS | 55.0% | |
GGTAGGAAAGGAAGGAGGAG+GGG | + | chr2.4:31325096-31325115 | None:intergenic | 55.0% | |
GTTCTTCGTCTTGACGCCCA+GGG | - | chr2.4:31325431-31325450 | MS.gene043867:CDS | 55.0% | |
TCTGGTGTAGCAATCTGGCC+AGG | + | chr2.4:31325377-31325396 | None:intergenic | 55.0% | |
TGCTGAGCTGCGTGAGAAGA+AGG | - | chr2.4:31326288-31326307 | MS.gene043867:CDS | 55.0% | |
TGGGCGTCAAGACGAAGAAC+AGG | + | chr2.4:31325431-31325450 | None:intergenic | 55.0% | |
TGTTCTTCGTCTTGACGCCC+AGG | - | chr2.4:31325430-31325449 | MS.gene043867:CDS | 55.0% | |
TTCTTCTCACGCAGCTCAGC+AGG | + | chr2.4:31326289-31326308 | None:intergenic | 55.0% | |
! | GTTAGCTTGGGAGGTTGAGG+TGG | + | chr2.4:31326025-31326044 | None:intergenic | 55.0% |
! | TCAGGGCGTTCAGTCTCATG+AGG | - | chr2.4:31325148-31325167 | MS.gene043867:CDS | 55.0% |
!! | ACTTCCTTTTCGAGCCGGGT+GGG | + | chr2.4:31326202-31326221 | None:intergenic | 55.0% |
!! | TACTTCCTTTTCGAGCCGGG+TGG | + | chr2.4:31326203-31326222 | None:intergenic | 55.0% |
AGCTTGGGAGGTTGAGGTGG+TGG | + | chr2.4:31326022-31326041 | None:intergenic | 60.0% | |
CAAAGCTCCTGCGGCCTAAG+AGG | - | chr2.4:31325630-31325649 | MS.gene043867:CDS | 60.0% | |
GGCTCAGCAGGCGGTTCAAT+AGG | + | chr2.4:31325992-31326011 | None:intergenic | 60.0% | |
GGGATCACCTGCTGCTAGTG+TGG | - | chr2.4:31325055-31325074 | MS.gene043867:CDS | 60.0% | |
GTCAGAGCCACACTAGCAGC+AGG | + | chr2.4:31325065-31325084 | None:intergenic | 60.0% | |
! | AGATCCCACCCGGCTCGAAA+AGG | - | chr2.4:31326195-31326214 | MS.gene043867:CDS | 60.0% |
! | TTGGGAGGTTGAGGTGGTGG+AGG | + | chr2.4:31326019-31326038 | None:intergenic | 60.0% |
!! | TGGGAGGTTGAGGTGGTGGA+GGG | + | chr2.4:31326018-31326037 | None:intergenic | 60.0% |
AGCGGGCCTTGGGATGAGAG+AGG | + | chr2.4:31326378-31326397 | None:intergenic | 65.0% | |
GCAGGCGGTTCAATAGGCCG+AGG | + | chr2.4:31325986-31326005 | None:intergenic | 65.0% | |
TGCAGCTGCTGAGCGTGAGC+AGG | - | chr2.4:31326228-31326247 | MS.gene043867:CDS | 65.0% | |
!! | AGGTTGAGGTGGTGGAGGGG+CGG | + | chr2.4:31326014-31326033 | None:intergenic | 65.0% |
!! | GGGAGGTTGAGGTGGTGGAG+GGG | + | chr2.4:31326017-31326036 | None:intergenic | 65.0% |
!! | GGTTGAGGTGGTGGAGGGGC+GGG | + | chr2.4:31326013-31326032 | None:intergenic | 70.0% |
!! | GGAGGGGCGGGCTCAGCAGG+CGG | + | chr2.4:31326001-31326020 | None:intergenic | 80.0% |
!! | GGTGGAGGGGCGGGCTCAGC+AGG | + | chr2.4:31326004-31326023 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 31324651 | 31326744 | 31324651 | ID=MS.gene043867 |
chr2.4 | mRNA | 31324651 | 31326744 | 31324651 | ID=MS.gene043867.t1;Parent=MS.gene043867 |
chr2.4 | exon | 31324651 | 31326744 | 31324651 | ID=MS.gene043867.t1.exon1;Parent=MS.gene043867.t1 |
chr2.4 | CDS | 31324651 | 31326744 | 31324651 | ID=cds.MS.gene043867.t1;Parent=MS.gene043867.t1 |
Gene Sequence |
Protein sequence |