Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065857.t1 | AES63022.2 | 75.6 | 709 | 60 | 10 | 62 | 661 | 130 | 834 | 3.10E-256 | 894.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065857.t1 | Q9C7E7 | 52.9 | 654 | 228 | 11 | 79 | 658 | 139 | 786 | 9.2e-156 | 552.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065857.t1 | G7IF06 | 75.6 | 709 | 60 | 10 | 62 | 661 | 130 | 834 | 2.3e-256 | 894.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065857.t1 | MTR_1g115920 | 93.319 | 464 | 24 | 2 | 204 | 661 | 372 | 834 | 0.0 | 805 |
| MS.gene065857.t1 | MTR_1g115920 | 62.724 | 279 | 38 | 12 | 4 | 221 | 43 | 316 | 3.18e-74 | 255 |
| MS.gene065857.t1 | MTR_4g094355 | 80.498 | 241 | 13 | 2 | 150 | 390 | 45 | 251 | 2.77e-113 | 347 |
| MS.gene065857.t1 | MTR_4g094355 | 88.482 | 191 | 19 | 1 | 474 | 661 | 250 | 440 | 1.18e-112 | 346 |
| MS.gene065857.t1 | MTR_4g094355 | 83.721 | 43 | 7 | 0 | 34 | 76 | 2 | 44 | 1.67e-12 | 70.5 |
| MS.gene065857.t1 | MTR_5g039050 | 86.099 | 223 | 22 | 3 | 354 | 576 | 67 | 280 | 1.58e-111 | 342 |
| MS.gene065857.t1 | MTR_5g039050 | 82.222 | 45 | 7 | 1 | 216 | 259 | 6 | 50 | 5.49e-14 | 75.1 |
| MS.gene065857.t1 | MTR_5g039100 | 55.814 | 215 | 28 | 7 | 3 | 175 | 5 | 194 | 5.20e-51 | 175 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065857.t1 | AT1G28060 | 52.517 | 735 | 258 | 15 | 2 | 658 | 65 | 786 | 0.0 | 637 |
| MS.gene065857.t1 | AT1G28060 | 52.517 | 735 | 258 | 15 | 2 | 658 | 65 | 786 | 0.0 | 637 |
| MS.gene065857.t1 | AT1G28060 | 52.517 | 735 | 258 | 15 | 2 | 658 | 65 | 786 | 0.0 | 637 |
| MS.gene065857.t1 | AT3G55930 | 62.214 | 262 | 96 | 3 | 397 | 655 | 9 | 270 | 5.54e-97 | 299 |
| MS.gene065857.t1 | AT3G56790 | 68.333 | 60 | 18 | 1 | 422 | 480 | 144 | 203 | 1.63e-11 | 64.7 |
Find 180 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACACCAGAACACATTTAT+TGG | 0.127318 | 2.2:-27091191 | None:intergenic |
| ATAAAATTGAAGAGTAAATT+TGG | 0.190886 | 2.2:+27090320 | MS.gene065857:CDS |
| CTCATCTTGACCTTTGGTTT+TGG | 0.219944 | 2.2:-27090752 | None:intergenic |
| TGCTGGGGTTCCTCATTATT+GGG | 0.233213 | 2.2:+27091300 | MS.gene065857:CDS |
| AATTGGATGATAAGAGAATT+AGG | 0.237950 | 2.2:+27089541 | MS.gene065857:CDS |
| ATGCTGGGGTTCCTCATTAT+TGG | 0.242299 | 2.2:+27091299 | MS.gene065857:CDS |
| CTTCTGCATTCTGGAAATTA+TGG | 0.253483 | 2.2:+27090503 | MS.gene065857:CDS |
| ACAGGTGTGTCCAATGTATT+TGG | 0.256768 | 2.2:-27090947 | None:intergenic |
| AGAAGGAACGTAGGAGATTT+GGG | 0.270274 | 2.2:+27089577 | MS.gene065857:CDS |
| TGATGAATGCAAACTGAAAA+TGG | 0.271409 | 2.2:+27090550 | MS.gene065857:CDS |
| ACACACCTGTCTCACTTTAC+AGG | 0.272620 | 2.2:+27090960 | MS.gene065857:CDS |
| AAGAAGGAACGTAGGAGATT+TGG | 0.290068 | 2.2:+27089576 | MS.gene065857:CDS |
| CTTTGCTAGCTGTGCTTGTT+TGG | 0.291419 | 2.2:-27090369 | None:intergenic |
| CTCCTTAGCTATACGCCTTT+GGG | 0.294775 | 2.2:-27090687 | None:intergenic |
| CTGCTCCTGTTTAGTTAGCT+TGG | 0.303650 | 2.2:-27090651 | None:intergenic |
| ACGTCCCACCACTCAATATC+TGG | 0.306527 | 2.2:-27090476 | None:intergenic |
| TCTCCTTAGCTATACGCCTT+TGG | 0.307916 | 2.2:-27090688 | None:intergenic |
| TTGGGAGGTTGAGGTGGTGG+AGG | 0.312517 | 2.2:-27090632 | None:intergenic |
| AAGCAACCTTAGCACATTAA+AGG | 0.318390 | 2.2:+27090115 | MS.gene065857:CDS |
| TGCTCCTGTTTAGTTAGCTT+GGG | 0.318790 | 2.2:-27090650 | None:intergenic |
| CGTGAAGTGTTTGTGGATGC+TGG | 0.322935 | 2.2:+27091283 | MS.gene065857:CDS |
| CACCACTCAATATCTGGAAT+TGG | 0.327730 | 2.2:-27090470 | None:intergenic |
| GGTGGAGGGGCGGGCTCAGC+AGG | 0.333316 | 2.2:-27090617 | None:intergenic |
| GACGTGGCACTTCTGCATTC+TGG | 0.335270 | 2.2:+27090494 | MS.gene065857:CDS |
| AGCTTGGGAGGTTGAGGTGG+TGG | 0.339497 | 2.2:-27090635 | None:intergenic |
| GTTCATCTATTTCACGTCCC+TGG | 0.343803 | 2.2:-27090064 | None:intergenic |
| TCAAAATGAGGATTAGATTC+AGG | 0.353354 | 2.2:-27090200 | None:intergenic |
| TGAAATACTAAAACCTGTAT+TGG | 0.355353 | 2.2:+27090169 | MS.gene065857:CDS |
| ATTGGATGATAAGAGAATTA+GGG | 0.360540 | 2.2:+27089542 | MS.gene065857:CDS |
| GAACCTATTGAAGCTCGATT+TGG | 0.361063 | 2.2:-27091227 | None:intergenic |
| ATCAACTCTATAGCGGGCCT+TGG | 0.361133 | 2.2:-27091002 | None:intergenic |
| AAATTACTCATCTTGACCTT+TGG | 0.381357 | 2.2:-27090758 | None:intergenic |
| AAGTCTCATGAGGAGGATTC+TGG | 0.387509 | 2.2:+27089771 | MS.gene065857:CDS |
| GGTTGAGGTGGTGGAGGGGC+GGG | 0.389700 | 2.2:-27090626 | None:intergenic |
| TGTTTGTGGAGGAAGGAAAA+TGG | 0.392737 | 2.2:+27090279 | MS.gene065857:CDS |
| AGGTTGAGGTGGTGGAGGGG+CGG | 0.392897 | 2.2:-27090627 | None:intergenic |
| TTTGTAATTTCTATTAAGTT+CGG | 0.393587 | 2.2:-27090416 | None:intergenic |
| TCTACAACTGCTGGAAAACT+TGG | 0.400509 | 2.2:+27089807 | MS.gene065857:CDS |
| AGCAAGTCAATTAAGAGGTA+TGG | 0.404160 | 2.2:+27091103 | MS.gene065857:CDS |
| TAGTGTGGCTCTGACATCTT+TGG | 0.404372 | 2.2:+27089689 | MS.gene065857:CDS |
| TTCTTCTCACGCAGCTCAGC+AGG | 0.405655 | 2.2:-27090902 | None:intergenic |
| TTGCCAAATCGAGCTTCAAT+AGG | 0.406342 | 2.2:+27091224 | MS.gene065857:CDS |
| TGCAGCTGCTGAGCGTGAGC+AGG | 0.412035 | 2.2:+27090844 | MS.gene065857:CDS |
| TTCATCTATTTCACGTCCCT+GGG | 0.414957 | 2.2:-27090063 | None:intergenic |
| TGATAATGAGGCTAGGGTTA+AGG | 0.417089 | 2.2:+27089608 | MS.gene065857:CDS |
| GAATCTACAGCTATGTTTCC+TGG | 0.422589 | 2.2:+27089972 | MS.gene065857:CDS |
| TTCCTCTTATGCGAGGAGTA+TGG | 0.424460 | 2.2:-27089492 | None:intergenic |
| CACCATACTCCTCGCATAAG+AGG | 0.428130 | 2.2:+27089490 | MS.gene065857:CDS |
| TTTAATGTGCTAAGGTTGCT+TGG | 0.430099 | 2.2:-27090113 | None:intergenic |
| ACATAGCTATGATCGGGAAT+TGG | 0.430206 | 2.2:+27089524 | MS.gene065857:CDS |
| GGCTCAGCAGGCGGTTCAAT+AGG | 0.433119 | 2.2:-27090605 | None:intergenic |
| CAAAGCTCCTGCGGCCTAAG+AGG | 0.436122 | 2.2:+27090246 | MS.gene065857:CDS |
| TAACGTCTGGTGTAGCAATC+TGG | 0.436715 | 2.2:-27089995 | None:intergenic |
| ACCTCCCAAGCTAACTAAAC+AGG | 0.443090 | 2.2:+27090646 | MS.gene065857:CDS |
| TTATGCGTAGACGTATTGAT+TGG | 0.448965 | 2.2:+27091131 | MS.gene065857:CDS |
| AACAGAAAATTCATCCTCTT+AGG | 0.449563 | 2.2:-27090260 | None:intergenic |
| CGCCTTCTTAGCCTTTGCTA+AGG | 0.450874 | 2.2:-27089850 | None:intergenic |
| ATTAGTGTTGTTGTGGTTGA+AGG | 0.451398 | 2.2:+27091076 | MS.gene065857:CDS |
| GGAGGGGCGGGCTCAGCAGG+CGG | 0.453459 | 2.2:-27090614 | None:intergenic |
| AGTAATTTACATAAGGTACT+AGG | 0.456676 | 2.2:+27090773 | MS.gene065857:CDS |
| GTGAAGTGTTTGTGGATGCT+GGG | 0.458044 | 2.2:+27091284 | MS.gene065857:CDS |
| TAGGGTTTGTGAAGCAAAGA+AGG | 0.462240 | 2.2:+27089560 | MS.gene065857:CDS |
| AGATGCCAATAAATGTGTTC+TGG | 0.462586 | 2.2:+27091186 | MS.gene065857:CDS |
| TGTTCTTCGTCTTGACGCCC+AGG | 0.463631 | 2.2:+27090046 | MS.gene065857:CDS |
| GGGTCATCATCTACAACTGC+TGG | 0.466544 | 2.2:+27089798 | MS.gene065857:CDS |
| TGGGAGGTTGAGGTGGTGGA+GGG | 0.468936 | 2.2:-27090631 | None:intergenic |
| TCAGGATTGACATCCAATAC+AGG | 0.470166 | 2.2:-27090182 | None:intergenic |
| GCTCAAGAAAATCGTTTGAC+TGG | 0.472903 | 2.2:+27091031 | MS.gene065857:CDS |
| GGGAGGTTGAGGTGGTGGAG+GGG | 0.473436 | 2.2:-27090630 | None:intergenic |
| TGCTGAGCTGCGTGAGAAGA+AGG | 0.474449 | 2.2:+27090904 | MS.gene065857:CDS |
| ACCACTCAATATCTGGAATT+GGG | 0.474879 | 2.2:-27090469 | None:intergenic |
| CGAAGAACAGGAACCTTGGT+TGG | 0.478730 | 2.2:-27090032 | None:intergenic |
| CATGAGGAGGATTCTGGAGA+TGG | 0.480820 | 2.2:+27089777 | MS.gene065857:CDS |
| TGGGGATTATTATGATAATG+AGG | 0.482713 | 2.2:+27089596 | MS.gene065857:CDS |
| TTAGTTAGCTTGGGAGGTTG+AGG | 0.485289 | 2.2:-27090641 | None:intergenic |
| GTGAGCAGGCTCACATAGAT+AGG | 0.485650 | 2.2:+27090858 | MS.gene065857:CDS |
| GAGGAAGTTACTATTACTAA+TGG | 0.487185 | 2.2:+27089630 | MS.gene065857:CDS |
| AATCGTGGCGGCTCCGATGA+TGG | 0.489243 | 2.2:-27089401 | None:intergenic |
| AGCTGCTCGTGAAGTGTTTG+TGG | 0.491618 | 2.2:+27091276 | MS.gene065857:CDS |
| CCTCTGTATAGTTGACAGCT+TGG | 0.492819 | 2.2:-27091324 | None:intergenic |
| GTTAGCTTGGGAGGTTGAGG+TGG | 0.493935 | 2.2:-27090638 | None:intergenic |
| AGATCCCACCCGGCTCGAAA+AGG | 0.494619 | 2.2:+27090811 | MS.gene065857:CDS |
| AGCTAAGGAGAAAGAGCGAC+AGG | 0.494652 | 2.2:+27090700 | MS.gene065857:CDS |
| GCGACAGGAGATGATTAGAC+AGG | 0.494709 | 2.2:+27090715 | MS.gene065857:CDS |
| TCCTCCTTCCTTTCCTACCA+AGG | 0.496795 | 2.2:+27089716 | MS.gene065857:CDS |
| CAAGATGAGTAATTTACATA+AGG | 0.497213 | 2.2:+27090766 | MS.gene065857:CDS |
| GGAACCTTGGTTGGTTTCTG+AGG | 0.507895 | 2.2:-27090023 | None:intergenic |
| TTCACAAGAAAGCACACAGT+TGG | 0.508164 | 2.2:+27089938 | MS.gene065857:CDS |
| TGGGCGTCAAGACGAAGAAC+AGG | 0.509477 | 2.2:-27090044 | None:intergenic |
| GGCGGCTCCGATGATGGTTA+CGG | 0.511230 | 2.2:-27089395 | None:intergenic |
| GCAAGTCAATTAAGAGGTAT+GGG | 0.512247 | 2.2:+27091104 | MS.gene065857:CDS |
| TCAACTCTATAGCGGGCCTT+GGG | 0.512863 | 2.2:-27091001 | None:intergenic |
| TCCTGTTTAGTTAGCTTGGG+AGG | 0.513523 | 2.2:-27090647 | None:intergenic |
| CAGGTGTGTCCAATGTATTT+GGG | 0.514012 | 2.2:-27090946 | None:intergenic |
| TTTACCCTGTAAAGTGAGAC+AGG | 0.519082 | 2.2:-27090965 | None:intergenic |
| TCACAAGAAAGCACACAGTT+GGG | 0.520179 | 2.2:+27089939 | MS.gene065857:CDS |
| CGAAGATACCTTGGTAGGAA+AGG | 0.521337 | 2.2:-27089724 | None:intergenic |
| GTGGAAGCAAGTCAATTAAG+AGG | 0.522404 | 2.2:+27091098 | MS.gene065857:CDS |
| ATTATTATGATAATGAGGCT+AGG | 0.526801 | 2.2:+27089601 | MS.gene065857:CDS |
| TTCATCATCTATAGTACCGT+TGG | 0.528603 | 2.2:-27090534 | None:intergenic |
| TAGAGAACATAGCTATGATC+GGG | 0.530400 | 2.2:+27089518 | MS.gene065857:CDS |
| ACTTCGATTTAGATCGATGA+TGG | 0.530842 | 2.2:-27089437 | None:intergenic |
| TGATTGGACTGATGTTTCAA+AGG | 0.530923 | 2.2:+27091147 | MS.gene065857:CDS |
| CACACCTGTCTCACTTTACA+GGG | 0.531003 | 2.2:+27090961 | MS.gene065857:CDS |
| ATTTAGATCGATGATGGCAG+TGG | 0.531501 | 2.2:-27089431 | None:intergenic |
| GTCAGAGCCACACTAGCAGC+AGG | 0.532669 | 2.2:-27089681 | None:intergenic |
| TTCTGAGGGATAGTAACGTC+TGG | 0.532884 | 2.2:-27090008 | None:intergenic |
| TGCCTTAGCAAAGGCTAAGA+AGG | 0.534221 | 2.2:+27089848 | MS.gene065857:CDS |
| GACCCAAAGGCGTATAGCTA+AGG | 0.535984 | 2.2:+27090685 | MS.gene065857:CDS |
| AGTGTTGTTGTGGTTGAAGG+TGG | 0.536548 | 2.2:+27091079 | MS.gene065857:CDS |
| TAATGAGGCTAGGGTTAAGG+AGG | 0.542515 | 2.2:+27089611 | MS.gene065857:CDS |
| AGCTCAAGCAAAAGAGCTGA+AGG | 0.543647 | 2.2:+27090346 | MS.gene065857:CDS |
| TGATTATTCACGTGTTGCCG+TGG | 0.545488 | 2.2:+27089653 | MS.gene065857:CDS |
| GAACCTTGGTTGGTTTCTGA+GGG | 0.546067 | 2.2:-27090022 | None:intergenic |
| AGCTGCGTGAGAAGAAGGAA+AGG | 0.547194 | 2.2:+27090909 | MS.gene065857:CDS |
| ATAGAGAACATAGCTATGAT+CGG | 0.548241 | 2.2:+27089517 | MS.gene065857:CDS |
| AGATATTGAGTGGTGGGACG+TGG | 0.548713 | 2.2:+27090478 | MS.gene065857:CDS |
| TTATTATGATAATGAGGCTA+GGG | 0.548857 | 2.2:+27089602 | MS.gene065857:CDS |
| CCCATTCTCTCATCAAAATG+AGG | 0.549338 | 2.2:-27090212 | None:intergenic |
| CAAACAAGCACAGCTAGCAA+AGG | 0.555686 | 2.2:+27090370 | MS.gene065857:CDS |
| GGGATCACCTGCTGCTAGTG+TGG | 0.556603 | 2.2:+27089674 | MS.gene065857:CDS |
| TCGATGATGGCAGTGGTCAT+CGG | 0.557491 | 2.2:-27089424 | None:intergenic |
| GGCAGTGGTCATCGGAATCG+TGG | 0.561202 | 2.2:-27089416 | None:intergenic |
| TGTTGACCTTTAATGTGCTA+AGG | 0.561959 | 2.2:-27090121 | None:intergenic |
| GTTCTTCGTCTTGACGCCCA+GGG | 0.562372 | 2.2:+27090047 | MS.gene065857:CDS |
| ATTAACATCAACTCTATAGC+GGG | 0.562728 | 2.2:-27091008 | None:intergenic |
| TGACGGTATTAGTGTTGTTG+TGG | 0.562946 | 2.2:+27091069 | MS.gene065857:CDS |
| AATTCATCCTCTTAGGCCGC+AGG | 0.563858 | 2.2:-27090253 | None:intergenic |
| TCTGGTGTAGCAATCTGGCC+AGG | 0.566957 | 2.2:-27089990 | None:intergenic |
| AACGCGACCGTAACCATCAT+CGG | 0.568326 | 2.2:+27089388 | MS.gene065857:CDS |
| GATACCTTGGTAGGAAAGGA+AGG | 0.574315 | 2.2:-27089720 | None:intergenic |
| GTATTATGACCCAAATACAT+TGG | 0.579784 | 2.2:+27090937 | MS.gene065857:CDS |
| GTAATTTACATAAGGTACTA+GGG | 0.581923 | 2.2:+27090774 | MS.gene065857:CDS |
| ATCGAAGTGCGATGAAGAGA+GGG | 0.582378 | 2.2:+27089452 | MS.gene065857:CDS |
| ATGAGGAGGATTCTGGAGAT+GGG | 0.584035 | 2.2:+27089778 | MS.gene065857:CDS |
| CTCTTATGCGAGGAGTATGG+TGG | 0.584930 | 2.2:-27089489 | None:intergenic |
| TTGGTAGGAAAGGAAGGAGG+AGG | 0.584935 | 2.2:-27089714 | None:intergenic |
| CTAAGGCATCACTACTAGAG+AGG | 0.588190 | 2.2:-27089833 | None:intergenic |
| TGGTAGGAAAGGAAGGAGGA+GGG | 0.588204 | 2.2:-27089713 | None:intergenic |
| GGTAGGAAAGGAAGGAGGAG+GGG | 0.590732 | 2.2:-27089712 | None:intergenic |
| TGAAAATAACAAGTCTCATG+AGG | 0.598446 | 2.2:+27089761 | MS.gene065857:CDS |
| AATTCCAGATATTGAGTGGT+GGG | 0.600042 | 2.2:+27090472 | MS.gene065857:CDS |
| AATCGAAGTGCGATGAAGAG+AGG | 0.601185 | 2.2:+27089451 | MS.gene065857:CDS |
| TGAAGAGAGGGAAGATTCAG+TGG | 0.601353 | 2.2:+27089464 | MS.gene065857:CDS |
| AGTAGTAATCGAAGATACCT+TGG | 0.605884 | 2.2:-27089733 | None:intergenic |
| TCTATCTTTCCTCTTATGCG+AGG | 0.606208 | 2.2:-27089499 | None:intergenic |
| CGACAGGAGATGATTAGACA+GGG | 0.610803 | 2.2:+27090716 | MS.gene065857:CDS |
| AAGACGAAGAACAGGAACCT+TGG | 0.611050 | 2.2:-27090036 | None:intergenic |
| GATTATTCACGTGTTGCCGT+GGG | 0.611853 | 2.2:+27089654 | MS.gene065857:CDS |
| AAATGACCTCTCTCATCCCA+AGG | 0.616566 | 2.2:+27090985 | MS.gene065857:CDS |
| TGTAATGAAAGCAAAACTGA+AGG | 0.617069 | 2.2:+27090445 | MS.gene065857:CDS |
| ACAGCTTGGTCCCAATAATG+AGG | 0.617442 | 2.2:-27091310 | None:intergenic |
| TAGTAGTGATGCCTTAGCAA+AGG | 0.620911 | 2.2:+27089839 | MS.gene065857:CDS |
| AGCACAGCTAGCAAAGGCAA+AGG | 0.626359 | 2.2:+27090376 | MS.gene065857:CDS |
| CAATTCCAGATATTGAGTGG+TGG | 0.626915 | 2.2:+27090471 | MS.gene065857:CDS |
| GCAGGCGGTTCAATAGGCCG+AGG | 0.628346 | 2.2:-27090599 | None:intergenic |
| CCAATAAATGTGTTCTGGTG+TGG | 0.635559 | 2.2:+27091191 | MS.gene065857:CDS |
| ACTAGCAGCAGGTGATCCCA+CGG | 0.637646 | 2.2:-27089670 | None:intergenic |
| GAATTTGAGTTATTCAACTG+AGG | 0.639060 | 2.2:-27089918 | None:intergenic |
| GAAGGAACGTAGGAGATTTG+GGG | 0.644948 | 2.2:+27089578 | MS.gene065857:CDS |
| ACCCAATTCCAGATATTGAG+TGG | 0.645164 | 2.2:+27090468 | MS.gene065857:CDS |
| AGCGGGCCTTGGGATGAGAG+AGG | 0.647591 | 2.2:-27090991 | None:intergenic |
| AAATAACAAGTCTCATGAGG+AGG | 0.649017 | 2.2:+27089764 | MS.gene065857:CDS |
| CTTAGCAAAGGCTAAGAAGG+CGG | 0.652364 | 2.2:+27089851 | MS.gene065857:CDS |
| GTAATCGAAGATACCTTGGT+AGG | 0.655300 | 2.2:-27089729 | None:intergenic |
| GGACGTGAAATAGATGAACA+TGG | 0.655823 | 2.2:+27090068 | MS.gene065857:CDS |
| AAATGTGTTCTGGTGTGGCA+AGG | 0.657323 | 2.2:+27091196 | MS.gene065857:CDS |
| TGAAGTGTTTGTGGATGCTG+GGG | 0.659104 | 2.2:+27091285 | MS.gene065857:CDS |
| CATAGAACCTCCAAAACCAA+AGG | 0.659248 | 2.2:+27090742 | MS.gene065857:CDS |
| GGATGTGCGGTGATTTGTGA+CGG | 0.662236 | 2.2:+27091052 | MS.gene065857:CDS |
| AATTATGGTGACATTGCCAA+CGG | 0.664930 | 2.2:+27090518 | MS.gene065857:CDS |
| CATTAACATCAACTCTATAG+CGG | 0.679052 | 2.2:-27091009 | None:intergenic |
| AGTGGTCATCGGAATCGTGG+CGG | 0.685299 | 2.2:-27089413 | None:intergenic |
| TCGACAAAACAAAGCTCCTG+CGG | 0.696622 | 2.2:+27090237 | MS.gene065857:CDS |
| GTGAAGCAAAGAAGGAACGT+AGG | 0.699586 | 2.2:+27089568 | MS.gene065857:CDS |
| AAGCAACTCAAGATCCCACC+CGG | 0.703568 | 2.2:+27090801 | MS.gene065857:CDS |
| AAATCGTTTGACTGGATGTG+CGG | 0.704841 | 2.2:+27091039 | MS.gene065857:CDS |
| ACCTTGGTAGGAAAGGAAGG+AGG | 0.710617 | 2.2:-27089717 | None:intergenic |
| CCAAGCTGTCAACTATACAG+AGG | 0.726035 | 2.2:+27091324 | MS.gene065857:CDS |
| TATCCCTCAGAAACCAACCA+AGG | 0.735568 | 2.2:+27090019 | MS.gene065857:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATTGAAGAGTAAATT+TGG | + | chr2.2:27090320-27090339 | MS.gene065857:CDS | 15.0% |
| !! | TTTGTAATTTCTATTAAGTT+CGG | - | chr2.2:27090419-27090438 | None:intergenic | 15.0% |
| ! | AATTGGATGATAAGAGAATT+AGG | + | chr2.2:27089541-27089560 | MS.gene065857:CDS | 25.0% |
| ! | ATTGGATGATAAGAGAATTA+GGG | + | chr2.2:27089542-27089561 | MS.gene065857:CDS | 25.0% |
| ! | CAAGATGAGTAATTTACATA+AGG | + | chr2.2:27090766-27090785 | MS.gene065857:CDS | 25.0% |
| ! | TGAAATACTAAAACCTGTAT+TGG | + | chr2.2:27090169-27090188 | MS.gene065857:CDS | 25.0% |
| !! | AGTAATTTACATAAGGTACT+AGG | + | chr2.2:27090773-27090792 | MS.gene065857:CDS | 25.0% |
| !! | ATTATTATGATAATGAGGCT+AGG | + | chr2.2:27089601-27089620 | MS.gene065857:CDS | 25.0% |
| !! | GGAAAAATTCAACTTTTATG+TGG | + | chr2.2:27090571-27090590 | MS.gene065857:CDS | 25.0% |
| !! | GTAATTTACATAAGGTACTA+GGG | + | chr2.2:27090774-27090793 | MS.gene065857:CDS | 25.0% |
| !! | TTATTATGATAATGAGGCTA+GGG | + | chr2.2:27089602-27089621 | MS.gene065857:CDS | 25.0% |
| AAATTACTCATCTTGACCTT+TGG | - | chr2.2:27090761-27090780 | None:intergenic | 30.0% | |
| AACAGAAAATTCATCCTCTT+AGG | - | chr2.2:27090263-27090282 | None:intergenic | 30.0% | |
| ATAGAGAACATAGCTATGAT+CGG | + | chr2.2:27089517-27089536 | MS.gene065857:CDS | 30.0% | |
| ATTAACATCAACTCTATAGC+GGG | - | chr2.2:27091011-27091030 | None:intergenic | 30.0% | |
| CATTAACATCAACTCTATAG+CGG | - | chr2.2:27091012-27091031 | None:intergenic | 30.0% | |
| GAGGAAGTTACTATTACTAA+TGG | + | chr2.2:27089630-27089649 | MS.gene065857:CDS | 30.0% | |
| GTATTATGACCCAAATACAT+TGG | + | chr2.2:27090937-27090956 | MS.gene065857:CDS | 30.0% | |
| TCAAAATGAGGATTAGATTC+AGG | - | chr2.2:27090203-27090222 | None:intergenic | 30.0% | |
| TGAAAATAACAAGTCTCATG+AGG | + | chr2.2:27089761-27089780 | MS.gene065857:CDS | 30.0% | |
| TGATGAATGCAAACTGAAAA+TGG | + | chr2.2:27090550-27090569 | MS.gene065857:CDS | 30.0% | |
| TGTAATGAAAGCAAAACTGA+AGG | + | chr2.2:27090445-27090464 | MS.gene065857:CDS | 30.0% | |
| ! | GAATTTGAGTTATTCAACTG+AGG | - | chr2.2:27089921-27089940 | None:intergenic | 30.0% |
| ! | TGGGGATTATTATGATAATG+AGG | + | chr2.2:27089596-27089615 | MS.gene065857:CDS | 30.0% |
| AAATAACAAGTCTCATGAGG+AGG | + | chr2.2:27089764-27089783 | MS.gene065857:CDS | 35.0% | |
| AACAGGAGCAGAAAAAACTA+AGG | + | chr2.2:27090663-27090682 | MS.gene065857:CDS | 35.0% | |
| AAGCAACCTTAGCACATTAA+AGG | + | chr2.2:27090115-27090134 | MS.gene065857:CDS | 35.0% | |
| AATTATGGTGACATTGCCAA+CGG | + | chr2.2:27090518-27090537 | MS.gene065857:CDS | 35.0% | |
| AATTCCAGATATTGAGTGGT+GGG | + | chr2.2:27090472-27090491 | MS.gene065857:CDS | 35.0% | |
| ACTTCGATTTAGATCGATGA+TGG | - | chr2.2:27089440-27089459 | None:intergenic | 35.0% | |
| AGAAAAAACTAAGGACCCAA+AGG | + | chr2.2:27090672-27090691 | MS.gene065857:CDS | 35.0% | |
| AGATGCCAATAAATGTGTTC+TGG | + | chr2.2:27091186-27091205 | MS.gene065857:CDS | 35.0% | |
| AGCAAGTCAATTAAGAGGTA+TGG | + | chr2.2:27091103-27091122 | MS.gene065857:CDS | 35.0% | |
| AGTAGTAATCGAAGATACCT+TGG | - | chr2.2:27089736-27089755 | None:intergenic | 35.0% | |
| TAGAGAACATAGCTATGATC+GGG | + | chr2.2:27089518-27089537 | MS.gene065857:CDS | 35.0% | |
| TGATTGGACTGATGTTTCAA+AGG | + | chr2.2:27091147-27091166 | MS.gene065857:CDS | 35.0% | |
| TGTTGACCTTTAATGTGCTA+AGG | - | chr2.2:27090124-27090143 | None:intergenic | 35.0% | |
| TTCATCATCTATAGTACCGT+TGG | - | chr2.2:27090537-27090556 | None:intergenic | 35.0% | |
| TTTAATGTGCTAAGGTTGCT+TGG | - | chr2.2:27090116-27090135 | None:intergenic | 35.0% | |
| ! | AATTTTCTGTTTGTGGAGGA+AGG | + | chr2.2:27090272-27090291 | MS.gene065857:CDS | 35.0% |
| ! | ACCACTCAATATCTGGAATT+GGG | - | chr2.2:27090472-27090491 | None:intergenic | 35.0% |
| ! | ACTTTTATGTGGAACATCCT+CGG | + | chr2.2:27090582-27090601 | MS.gene065857:CDS | 35.0% |
| ! | ATTAGTGTTGTTGTGGTTGA+AGG | + | chr2.2:27091076-27091095 | MS.gene065857:CDS | 35.0% |
| ! | CTTCTGCATTCTGGAAATTA+TGG | + | chr2.2:27090503-27090522 | MS.gene065857:CDS | 35.0% |
| ! | GAGGATGAATTTTCTGTTTG+TGG | + | chr2.2:27090265-27090284 | MS.gene065857:CDS | 35.0% |
| ! | GATGAATTTTCTGTTTGTGG+AGG | + | chr2.2:27090268-27090287 | MS.gene065857:CDS | 35.0% |
| ! | GCAAGTCAATTAAGAGGTAT+GGG | + | chr2.2:27091104-27091123 | MS.gene065857:CDS | 35.0% |
| ! | TTATGCGTAGACGTATTGAT+TGG | + | chr2.2:27091131-27091150 | MS.gene065857:CDS | 35.0% |
| !! | CCTCATTTTGATGAGAGAAT+GGG | + | chr2.2:27090212-27090231 | MS.gene065857:CDS | 35.0% |
| !! | TCCTCATTTTGATGAGAGAA+TGG | + | chr2.2:27090211-27090230 | MS.gene065857:CDS | 35.0% |
| AAATCGTTTGACTGGATGTG+CGG | + | chr2.2:27091039-27091058 | MS.gene065857:CDS | 40.0% | |
| AAGAAGGAACGTAGGAGATT+TGG | + | chr2.2:27089576-27089595 | MS.gene065857:CDS | 40.0% | |
| ACAGGTGTGTCCAATGTATT+TGG | - | chr2.2:27090950-27090969 | None:intergenic | 40.0% | |
| ACATAGCTATGATCGGGAAT+TGG | + | chr2.2:27089524-27089543 | MS.gene065857:CDS | 40.0% | |
| ACCCAATTCCAGATATTGAG+TGG | + | chr2.2:27090468-27090487 | MS.gene065857:CDS | 40.0% | |
| AGAAGGAACGTAGGAGATTT+GGG | + | chr2.2:27089577-27089596 | MS.gene065857:CDS | 40.0% | |
| CAATTCCAGATATTGAGTGG+TGG | + | chr2.2:27090471-27090490 | MS.gene065857:CDS | 40.0% | |
| CAGGTGTGTCCAATGTATTT+GGG | - | chr2.2:27090949-27090968 | None:intergenic | 40.0% | |
| CATAGAACCTCCAAAACCAA+AGG | + | chr2.2:27090742-27090761 | MS.gene065857:CDS | 40.0% | |
| CCAATAAATGTGTTCTGGTG+TGG | + | chr2.2:27091191-27091210 | MS.gene065857:CDS | 40.0% | |
| CCACACCAGAACACATTTAT+TGG | - | chr2.2:27091194-27091213 | None:intergenic | 40.0% | |
| CCCATTCTCTCATCAAAATG+AGG | - | chr2.2:27090215-27090234 | None:intergenic | 40.0% | |
| GAACCTATTGAAGCTCGATT+TGG | - | chr2.2:27091230-27091249 | None:intergenic | 40.0% | |
| GAATCTACAGCTATGTTTCC+TGG | + | chr2.2:27089972-27089991 | MS.gene065857:CDS | 40.0% | |
| GCTCAAGAAAATCGTTTGAC+TGG | + | chr2.2:27091031-27091050 | MS.gene065857:CDS | 40.0% | |
| GGACGTGAAATAGATGAACA+TGG | + | chr2.2:27090068-27090087 | MS.gene065857:CDS | 40.0% | |
| GTAATCGAAGATACCTTGGT+AGG | - | chr2.2:27089732-27089751 | None:intergenic | 40.0% | |
| GTGGAAGCAAGTCAATTAAG+AGG | + | chr2.2:27091098-27091117 | MS.gene065857:CDS | 40.0% | |
| TAGGGTTTGTGAAGCAAAGA+AGG | + | chr2.2:27089560-27089579 | MS.gene065857:CDS | 40.0% | |
| TAGTAGTGATGCCTTAGCAA+AGG | + | chr2.2:27089839-27089858 | MS.gene065857:CDS | 40.0% | |
| TCAGGATTGACATCCAATAC+AGG | - | chr2.2:27090185-27090204 | None:intergenic | 40.0% | |
| TCTACAACTGCTGGAAAACT+TGG | + | chr2.2:27089807-27089826 | MS.gene065857:CDS | 40.0% | |
| TCTATCTTTCCTCTTATGCG+AGG | - | chr2.2:27089502-27089521 | None:intergenic | 40.0% | |
| TGTTTGTGGAGGAAGGAAAA+TGG | + | chr2.2:27090279-27090298 | MS.gene065857:CDS | 40.0% | |
| TTCATCTATTTCACGTCCCT+GGG | - | chr2.2:27090066-27090085 | None:intergenic | 40.0% | |
| TTGCCAAATCGAGCTTCAAT+AGG | + | chr2.2:27091224-27091243 | MS.gene065857:CDS | 40.0% | |
| TTTACCCTGTAAAGTGAGAC+AGG | - | chr2.2:27090968-27090987 | None:intergenic | 40.0% | |
| ! | ATTTAGATCGATGATGGCAG+TGG | - | chr2.2:27089434-27089453 | None:intergenic | 40.0% |
| ! | CACCACTCAATATCTGGAAT+TGG | - | chr2.2:27090473-27090492 | None:intergenic | 40.0% |
| ! | TCACAAGAAAGCACACAGTT+GGG | + | chr2.2:27089939-27089958 | MS.gene065857:CDS | 40.0% |
| ! | TGACGGTATTAGTGTTGTTG+TGG | + | chr2.2:27091069-27091088 | MS.gene065857:CDS | 40.0% |
| ! | TGATAATGAGGCTAGGGTTA+AGG | + | chr2.2:27089608-27089627 | MS.gene065857:CDS | 40.0% |
| ! | TGCTCCTGTTTAGTTAGCTT+GGG | - | chr2.2:27090653-27090672 | None:intergenic | 40.0% |
| ! | TTCACAAGAAAGCACACAGT+TGG | + | chr2.2:27089938-27089957 | MS.gene065857:CDS | 40.0% |
| !! | CTCATCTTGACCTTTGGTTT+TGG | - | chr2.2:27090755-27090774 | None:intergenic | 40.0% |
| !!! | ATCTTGACCTTTGGTTTTGG+AGG | - | chr2.2:27090752-27090771 | None:intergenic | 40.0% |
| AAATGACCTCTCTCATCCCA+AGG | + | chr2.2:27090985-27091004 | MS.gene065857:CDS | 45.0% | |
| AAATGTGTTCTGGTGTGGCA+AGG | + | chr2.2:27091196-27091215 | MS.gene065857:CDS | 45.0% | |
| AAGACGAAGAACAGGAACCT+TGG | - | chr2.2:27090039-27090058 | None:intergenic | 45.0% | |
| AAGTCTCATGAGGAGGATTC+TGG | + | chr2.2:27089771-27089790 | MS.gene065857:CDS | 45.0% | |
| AATCGAAGTGCGATGAAGAG+AGG | + | chr2.2:27089451-27089470 | MS.gene065857:CDS | 45.0% | |
| ACACACCTGTCTCACTTTAC+AGG | + | chr2.2:27090960-27090979 | MS.gene065857:CDS | 45.0% | |
| ACAGCTTGGTCCCAATAATG+AGG | - | chr2.2:27091313-27091332 | None:intergenic | 45.0% | |
| ACCTCCCAAGCTAACTAAAC+AGG | + | chr2.2:27090646-27090665 | MS.gene065857:CDS | 45.0% | |
| AGCTCAAGCAAAAGAGCTGA+AGG | + | chr2.2:27090346-27090365 | MS.gene065857:CDS | 45.0% | |
| ATCGAAGTGCGATGAAGAGA+GGG | + | chr2.2:27089452-27089471 | MS.gene065857:CDS | 45.0% | |
| ATGCTGGGGTTCCTCATTAT+TGG | + | chr2.2:27091299-27091318 | MS.gene065857:CDS | 45.0% | |
| CAAACAAGCACAGCTAGCAA+AGG | + | chr2.2:27090370-27090389 | MS.gene065857:CDS | 45.0% | |
| CACACCTGTCTCACTTTACA+GGG | + | chr2.2:27090961-27090980 | MS.gene065857:CDS | 45.0% | |
| CCAAGCTGTCAACTATACAG+AGG | + | chr2.2:27091324-27091343 | MS.gene065857:CDS | 45.0% | |
| CCTCTGTATAGTTGACAGCT+TGG | - | chr2.2:27091327-27091346 | None:intergenic | 45.0% | |
| CGAAGATACCTTGGTAGGAA+AGG | - | chr2.2:27089727-27089746 | None:intergenic | 45.0% | |
| CGACAGGAGATGATTAGACA+GGG | + | chr2.2:27090716-27090735 | MS.gene065857:CDS | 45.0% | |
| CTCCTTAGCTATACGCCTTT+GGG | - | chr2.2:27090690-27090709 | None:intergenic | 45.0% | |
| CTGCTCCTGTTTAGTTAGCT+TGG | - | chr2.2:27090654-27090673 | None:intergenic | 45.0% | |
| CTTAGCAAAGGCTAAGAAGG+CGG | + | chr2.2:27089851-27089870 | MS.gene065857:CDS | 45.0% | |
| CTTTGCTAGCTGTGCTTGTT+TGG | - | chr2.2:27090372-27090391 | None:intergenic | 45.0% | |
| GAAGGAACGTAGGAGATTTG+GGG | + | chr2.2:27089578-27089597 | MS.gene065857:CDS | 45.0% | |
| GATACCTTGGTAGGAAAGGA+AGG | - | chr2.2:27089723-27089742 | None:intergenic | 45.0% | |
| GATTATTCACGTGTTGCCGT+GGG | + | chr2.2:27089654-27089673 | MS.gene065857:CDS | 45.0% | |
| GTGAAGCAAAGAAGGAACGT+AGG | + | chr2.2:27089568-27089587 | MS.gene065857:CDS | 45.0% | |
| GTTCATCTATTTCACGTCCC+TGG | - | chr2.2:27090067-27090086 | None:intergenic | 45.0% | |
| TAACGTCTGGTGTAGCAATC+TGG | - | chr2.2:27089998-27090017 | None:intergenic | 45.0% | |
| TAATGAGGCTAGGGTTAAGG+AGG | + | chr2.2:27089611-27089630 | MS.gene065857:CDS | 45.0% | |
| TATCCCTCAGAAACCAACCA+AGG | + | chr2.2:27090019-27090038 | MS.gene065857:CDS | 45.0% | |
| TCGACAAAACAAAGCTCCTG+CGG | + | chr2.2:27090237-27090256 | MS.gene065857:CDS | 45.0% | |
| TCTCCTTAGCTATACGCCTT+TGG | - | chr2.2:27090691-27090710 | None:intergenic | 45.0% | |
| TGAAGAGAGGGAAGATTCAG+TGG | + | chr2.2:27089464-27089483 | MS.gene065857:CDS | 45.0% | |
| TGATTATTCACGTGTTGCCG+TGG | + | chr2.2:27089653-27089672 | MS.gene065857:CDS | 45.0% | |
| TGCCTTAGCAAAGGCTAAGA+AGG | + | chr2.2:27089848-27089867 | MS.gene065857:CDS | 45.0% | |
| TGCTGGGGTTCCTCATTATT+GGG | + | chr2.2:27091300-27091319 | MS.gene065857:CDS | 45.0% | |
| TTCCTCTTATGCGAGGAGTA+TGG | - | chr2.2:27089495-27089514 | None:intergenic | 45.0% | |
| ! | AGTGTTGTTGTGGTTGAAGG+TGG | + | chr2.2:27091079-27091098 | MS.gene065857:CDS | 45.0% |
| ! | ATGAGGAGGATTCTGGAGAT+GGG | + | chr2.2:27089778-27089797 | MS.gene065857:CDS | 45.0% |
| ! | CTAAGGCATCACTACTAGAG+AGG | - | chr2.2:27089836-27089855 | None:intergenic | 45.0% |
| ! | GTGAAGTGTTTGTGGATGCT+GGG | + | chr2.2:27091284-27091303 | MS.gene065857:CDS | 45.0% |
| ! | TCCTGTTTAGTTAGCTTGGG+AGG | - | chr2.2:27090650-27090669 | None:intergenic | 45.0% |
| ! | TGAAGTGTTTGTGGATGCTG+GGG | + | chr2.2:27091285-27091304 | MS.gene065857:CDS | 45.0% |
| ! | TTAGTTAGCTTGGGAGGTTG+AGG | - | chr2.2:27090644-27090663 | None:intergenic | 45.0% |
| ! | TTCTGAGGGATAGTAACGTC+TGG | - | chr2.2:27090011-27090030 | None:intergenic | 45.0% |
| !! | GAACCTTGGTTGGTTTCTGA+GGG | - | chr2.2:27090025-27090044 | None:intergenic | 45.0% |
| !! | TACGTACTTCCTTTTCGAGC+CGG | - | chr2.2:27090823-27090842 | None:intergenic | 45.0% |
| !! | TAGTGTGGCTCTGACATCTT+TGG | + | chr2.2:27089689-27089708 | MS.gene065857:CDS | 45.0% |
| AACGCGACCGTAACCATCAT+CGG | + | chr2.2:27089388-27089407 | MS.gene065857:CDS | 50.0% | |
| AAGCAACTCAAGATCCCACC+CGG | + | chr2.2:27090801-27090820 | MS.gene065857:CDS | 50.0% | |
| AATTCATCCTCTTAGGCCGC+AGG | - | chr2.2:27090256-27090275 | None:intergenic | 50.0% | |
| ACCTTGGTAGGAAAGGAAGG+AGG | - | chr2.2:27089720-27089739 | None:intergenic | 50.0% | |
| ACGTCCCACCACTCAATATC+TGG | - | chr2.2:27090479-27090498 | None:intergenic | 50.0% | |
| AGCACAGCTAGCAAAGGCAA+AGG | + | chr2.2:27090376-27090395 | MS.gene065857:CDS | 50.0% | |
| AGCTAAGGAGAAAGAGCGAC+AGG | + | chr2.2:27090700-27090719 | MS.gene065857:CDS | 50.0% | |
| AGCTGCGTGAGAAGAAGGAA+AGG | + | chr2.2:27090909-27090928 | MS.gene065857:CDS | 50.0% | |
| CACCATACTCCTCGCATAAG+AGG | + | chr2.2:27089490-27089509 | MS.gene065857:CDS | 50.0% | |
| CGAAGAACAGGAACCTTGGT+TGG | - | chr2.2:27090035-27090054 | None:intergenic | 50.0% | |
| GCGACAGGAGATGATTAGAC+AGG | + | chr2.2:27090715-27090734 | MS.gene065857:CDS | 50.0% | |
| GGGTCATCATCTACAACTGC+TGG | + | chr2.2:27089798-27089817 | MS.gene065857:CDS | 50.0% | |
| GTGAGCAGGCTCACATAGAT+AGG | + | chr2.2:27090858-27090877 | MS.gene065857:CDS | 50.0% | |
| TCCTCCTTCCTTTCCTACCA+AGG | + | chr2.2:27089716-27089735 | MS.gene065857:CDS | 50.0% | |
| TGGTAGGAAAGGAAGGAGGA+GGG | - | chr2.2:27089716-27089735 | None:intergenic | 50.0% | |
| TTGGTAGGAAAGGAAGGAGG+AGG | - | chr2.2:27089717-27089736 | None:intergenic | 50.0% | |
| ! | AGATATTGAGTGGTGGGACG+TGG | + | chr2.2:27090478-27090497 | MS.gene065857:CDS | 50.0% |
| ! | AGCTGCTCGTGAAGTGTTTG+TGG | + | chr2.2:27091276-27091295 | MS.gene065857:CDS | 50.0% |
| ! | CATGAGGAGGATTCTGGAGA+TGG | + | chr2.2:27089777-27089796 | MS.gene065857:CDS | 50.0% |
| ! | CGCCTTCTTAGCCTTTGCTA+AGG | - | chr2.2:27089853-27089872 | None:intergenic | 50.0% |
| ! | CGTGAAGTGTTTGTGGATGC+TGG | + | chr2.2:27091283-27091302 | MS.gene065857:CDS | 50.0% |
| ! | CTCTTATGCGAGGAGTATGG+TGG | - | chr2.2:27089492-27089511 | None:intergenic | 50.0% |
| ! | GACCCAAAGGCGTATAGCTA+AGG | + | chr2.2:27090685-27090704 | MS.gene065857:CDS | 50.0% |
| ! | GGATGTGCGGTGATTTGTGA+CGG | + | chr2.2:27091052-27091071 | MS.gene065857:CDS | 50.0% |
| ! | TCGATGATGGCAGTGGTCAT+CGG | - | chr2.2:27089427-27089446 | None:intergenic | 50.0% |
| !! | ACGTACTTCCTTTTCGAGCC+GGG | - | chr2.2:27090822-27090841 | None:intergenic | 50.0% |
| !! | ATCAACTCTATAGCGGGCCT+TGG | - | chr2.2:27091005-27091024 | None:intergenic | 50.0% |
| !! | GGAACCTTGGTTGGTTTCTG+AGG | - | chr2.2:27090026-27090045 | None:intergenic | 50.0% |
| !! | TCAACTCTATAGCGGGCCTT+GGG | - | chr2.2:27091004-27091023 | None:intergenic | 50.0% |
| ACTAGCAGCAGGTGATCCCA+CGG | - | chr2.2:27089673-27089692 | None:intergenic | 55.0% | |
| AGTGGTCATCGGAATCGTGG+CGG | - | chr2.2:27089416-27089435 | None:intergenic | 55.0% | |
| GACGTGGCACTTCTGCATTC+TGG | + | chr2.2:27090494-27090513 | MS.gene065857:CDS | 55.0% | |
| GGTAGGAAAGGAAGGAGGAG+GGG | - | chr2.2:27089715-27089734 | None:intergenic | 55.0% | |
| GTTCTTCGTCTTGACGCCCA+GGG | + | chr2.2:27090047-27090066 | MS.gene065857:CDS | 55.0% | |
| TCTGGTGTAGCAATCTGGCC+AGG | - | chr2.2:27089993-27090012 | None:intergenic | 55.0% | |
| TGCTGAGCTGCGTGAGAAGA+AGG | + | chr2.2:27090904-27090923 | MS.gene065857:CDS | 55.0% | |
| TGGGCGTCAAGACGAAGAAC+AGG | - | chr2.2:27090047-27090066 | None:intergenic | 55.0% | |
| TGTTCTTCGTCTTGACGCCC+AGG | + | chr2.2:27090046-27090065 | MS.gene065857:CDS | 55.0% | |
| TTCTTCTCACGCAGCTCAGC+AGG | - | chr2.2:27090905-27090924 | None:intergenic | 55.0% | |
| ! | GTTAGCTTGGGAGGTTGAGG+TGG | - | chr2.2:27090641-27090660 | None:intergenic | 55.0% |
| !! | ACTTCCTTTTCGAGCCGGGT+GGG | - | chr2.2:27090818-27090837 | None:intergenic | 55.0% |
| !! | TACTTCCTTTTCGAGCCGGG+TGG | - | chr2.2:27090819-27090838 | None:intergenic | 55.0% |
| AATCGTGGCGGCTCCGATGA+TGG | - | chr2.2:27089404-27089423 | None:intergenic | 60.0% | |
| AGCTTGGGAGGTTGAGGTGG+TGG | - | chr2.2:27090638-27090657 | None:intergenic | 60.0% | |
| CAAAGCTCCTGCGGCCTAAG+AGG | + | chr2.2:27090246-27090265 | MS.gene065857:CDS | 60.0% | |
| GGCAGTGGTCATCGGAATCG+TGG | - | chr2.2:27089419-27089438 | None:intergenic | 60.0% | |
| GGCTCAGCAGGCGGTTCAAT+AGG | - | chr2.2:27090608-27090627 | None:intergenic | 60.0% | |
| GGGATCACCTGCTGCTAGTG+TGG | + | chr2.2:27089674-27089693 | MS.gene065857:CDS | 60.0% | |
| GTCAGAGCCACACTAGCAGC+AGG | - | chr2.2:27089684-27089703 | None:intergenic | 60.0% | |
| ! | AGATCCCACCCGGCTCGAAA+AGG | + | chr2.2:27090811-27090830 | MS.gene065857:CDS | 60.0% |
| ! | GGCGGCTCCGATGATGGTTA+CGG | - | chr2.2:27089398-27089417 | None:intergenic | 60.0% |
| ! | TTGGGAGGTTGAGGTGGTGG+AGG | - | chr2.2:27090635-27090654 | None:intergenic | 60.0% |
| !! | TGGGAGGTTGAGGTGGTGGA+GGG | - | chr2.2:27090634-27090653 | None:intergenic | 60.0% |
| AGCGGGCCTTGGGATGAGAG+AGG | - | chr2.2:27090994-27091013 | None:intergenic | 65.0% | |
| GCAGGCGGTTCAATAGGCCG+AGG | - | chr2.2:27090602-27090621 | None:intergenic | 65.0% | |
| TGCAGCTGCTGAGCGTGAGC+AGG | + | chr2.2:27090844-27090863 | MS.gene065857:CDS | 65.0% | |
| !! | AGGTTGAGGTGGTGGAGGGG+CGG | - | chr2.2:27090630-27090649 | None:intergenic | 65.0% |
| !! | GGGAGGTTGAGGTGGTGGAG+GGG | - | chr2.2:27090633-27090652 | None:intergenic | 65.0% |
| !! | GGTTGAGGTGGTGGAGGGGC+GGG | - | chr2.2:27090629-27090648 | None:intergenic | 70.0% |
| !! | GGAGGGGCGGGCTCAGCAGG+CGG | - | chr2.2:27090617-27090636 | None:intergenic | 80.0% |
| !! | GGTGGAGGGGCGGGCTCAGC+AGG | - | chr2.2:27090620-27090639 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 27089375 | 27091360 | 27089375 | ID=MS.gene065857 |
| chr2.2 | mRNA | 27089375 | 27091360 | 27089375 | ID=MS.gene065857.t1;Parent=MS.gene065857 |
| chr2.2 | exon | 27089375 | 27091360 | 27089375 | ID=MS.gene065857.t1.exon1;Parent=MS.gene065857.t1 |
| chr2.2 | CDS | 27089375 | 27091360 | 27089375 | ID=cds.MS.gene065857.t1;Parent=MS.gene065857.t1 |
| Gene Sequence |
| Protein sequence |