Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037408.t1 | XP_013470428.1 | 93.5 | 600 | 37 | 1 | 1 | 598 | 1 | 600 | 0.00E+00 | 1120.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037408.t1 | Q9M2T9 | 73.9 | 605 | 141 | 3 | 1 | 588 | 1 | 605 | 1.6e-260 | 899.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037408.t1 | A0A072VS17 | 93.5 | 600 | 37 | 1 | 1 | 598 | 1 | 600 | 0.0e+00 | 1120.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene81620 | MS.gene037408 | PPI |
| MS.gene070505 | MS.gene037408 | PPI |
| MS.gene037408 | MS.gene070511 | PPI |
| MS.gene81615 | MS.gene037408 | PPI |
| MS.gene070503 | MS.gene037408 | PPI |
| MS.gene070507 | MS.gene037408 | PPI |
| MS.gene070492 | MS.gene037408 | PPI |
| MS.gene81622 | MS.gene037408 | PPI |
| MS.gene016743 | MS.gene037408 | PPI |
| MS.gene057884 | MS.gene037408 | PPI |
| MS.gene057883 | MS.gene037408 | PPI |
| MS.gene016742 | MS.gene037408 | PPI |
| MS.gene070510 | MS.gene037408 | PPI |
| MS.gene016758 | MS.gene037408 | PPI |
| MS.gene67840 | MS.gene037408 | PPI |
| MS.gene81617 | MS.gene037408 | PPI |
| MS.gene37911 | MS.gene037408 | PPI |
| MS.gene057886 | MS.gene037408 | PPI |
| MS.gene070509 | MS.gene037408 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037408.t1 | MTR_1g115295 | 96.000 | 600 | 22 | 1 | 1 | 598 | 1 | 600 | 0.0 | 1204 |
| MS.gene037408.t1 | MTR_1g018280 | 70.117 | 512 | 45 | 7 | 87 | 598 | 58 | 461 | 0.0 | 671 |
| MS.gene037408.t1 | MTR_4g077700 | 26.930 | 583 | 339 | 23 | 57 | 572 | 19 | 581 | 4.50e-47 | 177 |
| MS.gene037408.t1 | MTR_4g122580 | 26.990 | 578 | 338 | 18 | 57 | 568 | 19 | 578 | 7.41e-45 | 171 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037408.t1 | AT3G55400 | 73.884 | 605 | 141 | 3 | 1 | 588 | 1 | 605 | 0.0 | 927 |
| MS.gene037408.t1 | AT3G55400 | 75.534 | 515 | 111 | 2 | 1 | 500 | 1 | 515 | 0.0 | 814 |
| MS.gene037408.t1 | AT4G13780 | 25.874 | 572 | 345 | 19 | 57 | 567 | 20 | 573 | 2.01e-46 | 175 |
Find 182 sgRNAs with CRISPR-Local
Find 414 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATGGCCGTATACCATTT+TGG | 0.163191 | 1.3:+78444517 | None:intergenic |
| CGACGCCATTGCTCGCTTTC+AGG | 0.172482 | 1.3:-78447535 | MS.gene037408:intron |
| AACGATTTGGTTAGTAAGTT+TGG | 0.200559 | 1.3:-78443211 | MS.gene037408:CDS |
| GAGATGGAAATAGGGTTTAT+TGG | 0.220234 | 1.3:+78447695 | None:intergenic |
| TTCCTCAGAGAGGTGGAATT+TGG | 0.232008 | 1.3:-78443166 | MS.gene037408:CDS |
| AGAAGAAGGGAGATGGAAAT+AGG | 0.249938 | 1.3:+78447686 | None:intergenic |
| TGGCAGGAAATCTTCTTAAT+AGG | 0.253659 | 1.3:-78442934 | MS.gene037408:intron |
| TACGTTTCCATGCCGTTTAT+TGG | 0.277442 | 1.3:-78444574 | MS.gene037408:CDS |
| TTTAATTTGATAGCGGCTAT+TGG | 0.277602 | 1.3:-78447425 | MS.gene037408:intron |
| AAAGATGGCTGCACAAAGTT+TGG | 0.304459 | 1.3:+78446298 | None:intergenic |
| TTCCCGAGCATCCGTTGATT+GGG | 0.310196 | 1.3:-78445508 | MS.gene037408:CDS |
| GTATGGTTTGATGCTTTACT+AGG | 0.314469 | 1.3:-78445447 | MS.gene037408:CDS |
| TACGCTTGAACCAAACGATT+TGG | 0.323345 | 1.3:-78443224 | MS.gene037408:CDS |
| ATCAGCTTGTGAGGCTGTTC+TGG | 0.327249 | 1.3:-78442275 | MS.gene037408:CDS |
| TACCAAGTGGGGTGGACTTA+AGG | 0.328656 | 1.3:-78441557 | MS.gene037408:CDS |
| GAAACGGTGTTTAGTAAATC+AGG | 0.339575 | 1.3:+78445101 | None:intergenic |
| CCCAGGTTGCTGCTTCAAAT+TGG | 0.340068 | 1.3:+78441660 | None:intergenic |
| TTTCCCGAGCATCCGTTGAT+TGG | 0.340690 | 1.3:-78445509 | MS.gene037408:CDS |
| TGGGCTAAGCCTTCCCAAAA+TGG | 0.344820 | 1.3:-78444531 | MS.gene037408:CDS |
| CGTTAACGCCCCTCCTCATA+TGG | 0.346271 | 1.3:-78447583 | MS.gene037408:CDS |
| ATGCACAGCTTGGCTATTCC+AGG | 0.357457 | 1.3:-78441685 | MS.gene037408:CDS |
| CCAGCTATGCTAATGTCTGC+TGG | 0.359184 | 1.3:-78444551 | MS.gene037408:CDS |
| GAACTCAAGCTCGGAGTAAC+AGG | 0.361149 | 1.3:+78441716 | None:intergenic |
| ACCTTAAGCCTTGTGTTTCA+AGG | 0.361855 | 1.3:-78446390 | MS.gene037408:CDS |
| ACGATTTGGTTAGTAAGTTT+GGG | 0.362204 | 1.3:-78443210 | MS.gene037408:CDS |
| TTACTAAACACCGTTTCTTC+AGG | 0.362225 | 1.3:-78445095 | MS.gene037408:CDS |
| TCCTTGAAACACAAGGCTTA+AGG | 0.367680 | 1.3:+78446389 | None:intergenic |
| CCAGCTACACTGCACTTGAT+TGG | 0.385424 | 1.3:-78445068 | MS.gene037408:CDS |
| TTAATTTGATAGCGGCTATT+GGG | 0.387680 | 1.3:-78447424 | MS.gene037408:intron |
| ACCAAGTGGGGTGGACTTAA+GGG | 0.391465 | 1.3:-78441556 | MS.gene037408:CDS |
| CACAAGCTTACAAGACGCTT+TGG | 0.398442 | 1.3:-78447297 | MS.gene037408:CDS |
| GAGGTGGAATTTGGCAATGA+TGG | 0.400433 | 1.3:-78443157 | MS.gene037408:CDS |
| GAAGAAGGGAGATGGAAATA+GGG | 0.400944 | 1.3:+78447687 | None:intergenic |
| ATCAACGGATGCTCGGGAAA+TGG | 0.401014 | 1.3:+78445512 | None:intergenic |
| GTTGAGGTTGAGCCATGGCC+TGG | 0.404063 | 1.3:+78441530 | None:intergenic |
| AACTTACTAACCAAATCGTT+TGG | 0.404070 | 1.3:+78443214 | None:intergenic |
| AAGAAAGTTATATTCATTAC+CGG | 0.407015 | 1.3:-78447400 | MS.gene037408:CDS |
| TAATGCTGGTAATTCCTATA+TGG | 0.408560 | 1.3:-78442245 | MS.gene037408:CDS |
| TGTGAGGCTGTTCTGGAGAT+TGG | 0.410328 | 1.3:-78442268 | MS.gene037408:CDS |
| AGCCTTCCCAAAATGGTATA+CGG | 0.411499 | 1.3:-78444524 | MS.gene037408:CDS |
| CAGCCTCACAAGCTGATGTC+AGG | 0.412097 | 1.3:+78442281 | None:intergenic |
| AATAGGGTTTATTGGATTTG+AGG | 0.414097 | 1.3:+78447703 | None:intergenic |
| AGCAATGGCGTCGGCGGCGA+TGG | 0.415306 | 1.3:+78447545 | None:intergenic |
| CCAATCAAGTGCAGTGTAGC+TGG | 0.425417 | 1.3:+78445068 | None:intergenic |
| TGTCAGCTGTGAGGAATATA+AGG | 0.426210 | 1.3:-78446715 | MS.gene037408:intron |
| CATTTACCGAGCTGATTATG+AGG | 0.426407 | 1.3:-78446748 | MS.gene037408:CDS |
| TTGCAGAACAGAGCTGGTCT+TGG | 0.428986 | 1.3:+78447663 | None:intergenic |
| ATTCCTTTACCTCGTGTAAA+CGG | 0.431671 | 1.3:+78446275 | None:intergenic |
| GCACATCTTGCCAATACAAT+TGG | 0.438695 | 1.3:-78443097 | MS.gene037408:intron |
| TTCGTCATCATTTGAGGAAG+TGG | 0.439070 | 1.3:+78447635 | None:intergenic |
| CTCACCATGTTCATCGGTGC+CGG | 0.442498 | 1.3:+78447381 | None:intergenic |
| AGAGCTGGTCTTGGAGAAGA+AGG | 0.442571 | 1.3:+78447672 | None:intergenic |
| ACCAATTTGAAGCAGCAACC+TGG | 0.444665 | 1.3:-78441661 | MS.gene037408:CDS |
| GCTCAAAGTACCAATTGTAT+TGG | 0.446015 | 1.3:+78443087 | None:intergenic |
| GCCCCAATCAACGGATGCTC+GGG | 0.451436 | 1.3:+78445506 | None:intergenic |
| ACTTAAGGGTGGCCAGGCCA+TGG | 0.453301 | 1.3:-78441542 | MS.gene037408:CDS |
| TGAGTCTTGTCACTCGGAAC+AGG | 0.454916 | 1.3:+78445480 | None:intergenic |
| AAACAAGCTCAAGAAGTTGT+TGG | 0.459841 | 1.3:-78441418 | MS.gene037408:CDS |
| AGGGGCACGCTCATCCATAT+AGG | 0.466606 | 1.3:+78442231 | None:intergenic |
| TGCTGCTTCAAATTGGTCCC+TGG | 0.467272 | 1.3:+78441667 | None:intergenic |
| CCTCAGGCCACTATTGATCC+AGG | 0.467562 | 1.3:+78445542 | None:intergenic |
| AAACTGAAGTGGAAGACAAA+GGG | 0.469002 | 1.3:-78441483 | MS.gene037408:CDS |
| AAGAAGACTCTGAAAAGTAA+AGG | 0.472328 | 1.3:-78441448 | MS.gene037408:CDS |
| TAGCATAGCTGGCCAATAAA+CGG | 0.473012 | 1.3:+78444562 | None:intergenic |
| CCAGCAGACATTAGCATAGC+TGG | 0.474341 | 1.3:+78444551 | None:intergenic |
| GTCAAAATATCAGAAGTCAT+TGG | 0.475950 | 1.3:-78446341 | MS.gene037408:CDS |
| TGCCCCAATCAACGGATGCT+CGG | 0.476088 | 1.3:+78445505 | None:intergenic |
| GGATTTGAGGTGAGAAACAT+TGG | 0.479677 | 1.3:+78447716 | None:intergenic |
| AGAAGACTCTGAAAAGTAAA+GGG | 0.482397 | 1.3:-78441447 | MS.gene037408:CDS |
| GCCTTGTGTTTCAAGGAAAG+AGG | 0.485059 | 1.3:-78446383 | MS.gene037408:CDS |
| ATGTTAGGATGGTATGAAGA+TGG | 0.485616 | 1.3:-78443263 | MS.gene037408:intron |
| AGGTGGAATTTGGCAATGAT+GGG | 0.485834 | 1.3:-78443156 | MS.gene037408:CDS |
| CTCCCTGACATCAGCTTGTG+AGG | 0.486304 | 1.3:-78442284 | MS.gene037408:CDS |
| TTAGTAAATCAGGTTGCTCC+TGG | 0.489812 | 1.3:+78445111 | None:intergenic |
| GAGTAAGCGCTGCCCATATG+AGG | 0.492891 | 1.3:+78447570 | None:intergenic |
| CAAGGACAATGTAGCGAGGC+TGG | 0.493628 | 1.3:-78442834 | MS.gene037408:intron |
| ATTGGAACGAAGTGAAAGAA+TGG | 0.493740 | 1.3:+78447734 | None:intergenic |
| GGGTGGACTTAAGGGTGGCC+AGG | 0.494372 | 1.3:-78441548 | MS.gene037408:CDS |
| ATCCTAGCAAAGATTGGTTG+AGG | 0.496658 | 1.3:+78441514 | None:intergenic |
| GGCTCAAGGTTCCACCCCTA+CGG | 0.496674 | 1.3:-78447338 | MS.gene037408:CDS |
| TGCAGAAGGAAATGCATTCA+AGG | 0.496773 | 1.3:-78442852 | MS.gene037408:CDS |
| TGTTAGGATGGTATGAAGAT+GGG | 0.497162 | 1.3:-78443262 | MS.gene037408:intron |
| AATCCACTGCCAGTGTTGAT+TGG | 0.502097 | 1.3:+78442885 | None:intergenic |
| GTAGGGTTCGTCATCATTTG+AGG | 0.505930 | 1.3:+78447629 | None:intergenic |
| CTGCCAATCAACACTGGCAG+TGG | 0.507171 | 1.3:-78442888 | MS.gene037408:CDS |
| GCAACTGCTGCCGTGGCTCA+AGG | 0.510640 | 1.3:-78447352 | MS.gene037408:CDS |
| ACCCTTAAGTCCACCCCACT+TGG | 0.511818 | 1.3:+78441555 | None:intergenic |
| AGACTCAGACTATATATGTA+TGG | 0.517740 | 1.3:-78445464 | MS.gene037408:CDS |
| CTATTTGATGCAGGATGAGA+AGG | 0.520213 | 1.3:-78446443 | MS.gene037408:intron |
| TGAGATTGCAATGGTCCGTA+GGG | 0.524472 | 1.3:+78447323 | None:intergenic |
| AGCTGGCCAACCTGAAGAAA+CGG | 0.524943 | 1.3:+78445085 | None:intergenic |
| TATGGTTTGATGCTTTACTA+GGG | 0.525816 | 1.3:-78445446 | MS.gene037408:intron |
| TAAACACCGTTTCTTCAGGT+TGG | 0.526746 | 1.3:-78445091 | MS.gene037408:CDS |
| AATCTTCTTAATAGGACTCT+AGG | 0.528211 | 1.3:-78442926 | MS.gene037408:CDS |
| GTTCAAACCTGGATCAATAG+TGG | 0.530179 | 1.3:-78445549 | MS.gene037408:CDS |
| CCTTGGTCTCTCTTTAAGCA+AGG | 0.530338 | 1.3:-78442211 | MS.gene037408:CDS |
| CAGCTATGCTAATGTCTGCT+GGG | 0.530697 | 1.3:-78444550 | MS.gene037408:CDS |
| GTTCTGGAGATTGGTAATGC+TGG | 0.538081 | 1.3:-78442259 | MS.gene037408:CDS |
| AATGGCGTCGGCGGCGATGG+TGG | 0.539434 | 1.3:+78447548 | None:intergenic |
| GAGCATTTGCAGAACAGAGC+TGG | 0.542714 | 1.3:+78447657 | None:intergenic |
| CCCAAAATGGTATACGGCCA+TGG | 0.542751 | 1.3:-78444518 | MS.gene037408:CDS |
| GATTCCACGGTGGCTGCAGA+AGG | 0.543559 | 1.3:-78442866 | MS.gene037408:CDS |
| TGCTTCTGAAGCAGCTGCCA+AGG | 0.545752 | 1.3:-78442182 | MS.gene037408:intron |
| TCCCGAGCATCCGTTGATTG+GGG | 0.545821 | 1.3:-78445507 | MS.gene037408:CDS |
| GTCTTGGAGAAGAAGGGAGA+TGG | 0.547721 | 1.3:+78447679 | None:intergenic |
| ATGAAGATGGGCAAGTCACT+AGG | 0.550900 | 1.3:-78443250 | MS.gene037408:CDS |
| ATATGGATGAGCGTGCCCCT+TGG | 0.551543 | 1.3:-78442228 | MS.gene037408:CDS |
| AGCTCGGTAAATGTCACCAT+TGG | 0.558279 | 1.3:+78446758 | None:intergenic |
| CTGTCTCTAATATAATTACA+AGG | 0.560785 | 1.3:+78441765 | None:intergenic |
| ATGAGATTGCAATGGTCCGT+AGG | 0.561506 | 1.3:+78447322 | None:intergenic |
| TATTCGAGAGTGCTTGCCAA+TGG | 0.562606 | 1.3:-78446774 | MS.gene037408:CDS |
| AACAGGTATGCCCCAATCAA+CGG | 0.565056 | 1.3:+78445497 | None:intergenic |
| ACCTCGTGTAAACGGAAAGA+TGG | 0.565307 | 1.3:+78446283 | None:intergenic |
| AACCTCAACCAATCTTTGCT+AGG | 0.565548 | 1.3:-78441516 | MS.gene037408:CDS |
| ATCAGCACTAGCTGATGACC+AGG | 0.568431 | 1.3:-78445129 | MS.gene037408:CDS |
| ATACTTCTTCCTCAGAGAGG+TGG | 0.569549 | 1.3:-78443173 | MS.gene037408:CDS |
| AAAGCGAGCAATGGCGTCGG+CGG | 0.570755 | 1.3:+78447539 | None:intergenic |
| ATTGCAATGGTCCGTAGGGG+TGG | 0.570970 | 1.3:+78447327 | None:intergenic |
| CCAATTTGAAGCAGCAACCT+GGG | 0.571584 | 1.3:-78441660 | MS.gene037408:intron |
| GATTGAAAATCAAACTGAAG+TGG | 0.574353 | 1.3:-78441494 | MS.gene037408:CDS |
| TCCTCTTTCCTTGAAACACA+AGG | 0.575285 | 1.3:+78446382 | None:intergenic |
| GGGGCGTTAACGTAGTAAAG+AGG | 0.576539 | 1.3:+78447594 | None:intergenic |
| TAAATTTCTAGGTTCAAACC+TGG | 0.577775 | 1.3:-78445560 | MS.gene037408:intron |
| TTGAAACACAAGGCTTAAGG+TGG | 0.578255 | 1.3:+78446392 | None:intergenic |
| TACACTGCACTTGATTGGTA+AGG | 0.579282 | 1.3:-78445063 | MS.gene037408:intron |
| TATATTCTCGAACTCAAGCT+CGG | 0.581656 | 1.3:+78441707 | None:intergenic |
| AAGAGGGGTTGTGATGACGT+AGG | 0.584740 | 1.3:+78447611 | None:intergenic |
| AGCGCTGCCCATATGAGGAG+GGG | 0.586186 | 1.3:+78447575 | None:intergenic |
| GTTAACGCCCCTCCTCATAT+GGG | 0.587213 | 1.3:-78447582 | MS.gene037408:CDS |
| AAAATATCAGAAGTCATTGG+AGG | 0.587646 | 1.3:-78446338 | MS.gene037408:CDS |
| GGGCGTTAACGTAGTAAAGA+GGG | 0.589775 | 1.3:+78447595 | None:intergenic |
| GGGAAATGGAAAAGTCCCTC+AGG | 0.591961 | 1.3:+78445526 | None:intergenic |
| GAAAATTGCAACTGCTGCCG+TGG | 0.592158 | 1.3:-78447359 | MS.gene037408:CDS |
| ATACCTTCGTCAAGAATCCA+TGG | 0.594060 | 1.3:+78444501 | None:intergenic |
| AGCCTCACAAGCTGATGTCA+GGG | 0.594895 | 1.3:+78442282 | None:intergenic |
| TCGAGAATATATGCACAGCT+TGG | 0.599510 | 1.3:-78441695 | MS.gene037408:CDS |
| TAGCTGGCCAATAAACGGCA+TGG | 0.600474 | 1.3:+78444567 | None:intergenic |
| ACACAAGGCTTAAGGTGGAT+CGG | 0.602973 | 1.3:+78446397 | None:intergenic |
| CAAACTGAAGTGGAAGACAA+AGG | 0.603151 | 1.3:-78441484 | MS.gene037408:CDS |
| ATTTACCGAGCTGATTATGA+GGG | 0.603837 | 1.3:-78446747 | MS.gene037408:CDS |
| CCTTGCTTAAAGAGAGACCA+AGG | 0.604022 | 1.3:+78442211 | None:intergenic |
| AAAGAACTGCCAATCAACAC+TGG | 0.604833 | 1.3:-78442894 | MS.gene037408:CDS |
| CAAGCATGAAGCAATTGTGA+AGG | 0.606448 | 1.3:-78446802 | MS.gene037408:CDS |
| CTGGATCAATAGTGGCCTGA+GGG | 0.608588 | 1.3:-78445541 | MS.gene037408:CDS |
| AGGGGTGGAACCTTGAGCCA+CGG | 0.609720 | 1.3:+78447342 | None:intergenic |
| AGAGGGGTTGTGATGACGTA+GGG | 0.611101 | 1.3:+78447612 | None:intergenic |
| AAGCGCTGCCCATATGAGGA+GGG | 0.613611 | 1.3:+78447574 | None:intergenic |
| AACACTGGCAGTGGATTCCA+CGG | 0.615601 | 1.3:-78442879 | MS.gene037408:CDS |
| AAATTCCCTCATAATCAGCT+CGG | 0.616005 | 1.3:+78446742 | None:intergenic |
| TAAGCGCTGCCCATATGAGG+AGG | 0.622703 | 1.3:+78447573 | None:intergenic |
| ATTACCGGCACCGATGAACA+TGG | 0.624333 | 1.3:-78447385 | MS.gene037408:CDS |
| GAGCTGGTCTTGGAGAAGAA+GGG | 0.624359 | 1.3:+78447673 | None:intergenic |
| TGCACAGCTTGGCTATTCCA+GGG | 0.630460 | 1.3:-78441684 | MS.gene037408:CDS |
| GAAGACAAAGGGGTTGCAGT+CGG | 0.633467 | 1.3:-78441472 | MS.gene037408:CDS |
| CTGAAAGCGAGCAATGGCGT+CGG | 0.634768 | 1.3:+78447536 | None:intergenic |
| GCCATCTTTCCGTTTACACG+AGG | 0.638336 | 1.3:-78446284 | MS.gene037408:intron |
| AGGTACCTGAAAGCGAGCAA+TGG | 0.639138 | 1.3:+78447530 | None:intergenic |
| TAGAGAGATACCAAGTGGGG+TGG | 0.641306 | 1.3:-78441565 | MS.gene037408:CDS |
| AACTGAAGTGGAAGACAAAG+GGG | 0.642983 | 1.3:-78441482 | MS.gene037408:CDS |
| ATAGTCTGAGTCTTGTCACT+CGG | 0.651357 | 1.3:+78445474 | None:intergenic |
| CAATGATGGGGACTATTCAG+AGG | 0.651752 | 1.3:-78443143 | MS.gene037408:CDS |
| GATTGGTTGAGGTTGAGCCA+TGG | 0.658278 | 1.3:+78441525 | None:intergenic |
| TGCCAAATTCCACCTCTCTG+AGG | 0.662782 | 1.3:+78443164 | None:intergenic |
| ATTGTAGAGAGATACCAAGT+GGG | 0.663995 | 1.3:-78441569 | MS.gene037408:intron |
| TGGTCTCTCTTTAAGCAAGG+AGG | 0.665745 | 1.3:-78442208 | MS.gene037408:CDS |
| CATTGTAGAGAGATACCAAG+TGG | 0.666340 | 1.3:-78441570 | MS.gene037408:intron |
| CTTGCTTAAAGAGAGACCAA+GGG | 0.666502 | 1.3:+78442212 | None:intergenic |
| TAGATACTTCTTCCTCAGAG+AGG | 0.671329 | 1.3:-78443176 | MS.gene037408:CDS |
| GGTGGAATTTGGCAATGATG+GGG | 0.671855 | 1.3:-78443155 | MS.gene037408:CDS |
| CCTGGATCAATAGTGGCCTG+AGG | 0.674293 | 1.3:-78445542 | MS.gene037408:CDS |
| AATTTATTGTGTCAGCTGTG+AGG | 0.678267 | 1.3:-78446724 | MS.gene037408:CDS |
| GGCGTTAACGTAGTAAAGAG+GGG | 0.684483 | 1.3:+78447596 | None:intergenic |
| AGTAACAGGAGATAGTGCAA+TGG | 0.702926 | 1.3:+78441730 | None:intergenic |
| TTGTAGAGAGATACCAAGTG+GGG | 0.703831 | 1.3:-78441568 | MS.gene037408:intron |
| CGGCCATGGATTCTTGACGA+AGG | 0.712399 | 1.3:-78444504 | MS.gene037408:intron |
| TTGCTTAAAGAGAGACCAAG+GGG | 0.714060 | 1.3:+78442213 | None:intergenic |
| CATTCAAGGACAATGTAGCG+AGG | 0.714076 | 1.3:-78442838 | MS.gene037408:CDS |
| AAGTGGGGTGGACTTAAGGG+TGG | 0.714266 | 1.3:-78441553 | MS.gene037408:CDS |
| GAGATTGCAATGGTCCGTAG+GGG | 0.717593 | 1.3:+78447324 | None:intergenic |
| ATTTCCTTCTGCAGCCACCG+TGG | 0.736364 | 1.3:+78442862 | None:intergenic |
| CTTGTGAAATGAGATTGCAA+TGG | 0.748586 | 1.3:+78447314 | None:intergenic |
| ACTGGCAGTGGATTCCACGG+TGG | 0.777092 | 1.3:-78442876 | MS.gene037408:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAATATATAAAGCATTA+AGG | + | chr1.3:78445519-78445538 | None:intergenic | 10.0% |
| !!! | GTTTTCTTTAATAATTTATT+TGG | - | chr1.3:78443579-78443598 | MS.gene037408:intron | 10.0% |
| !!! | TATTATATTTAATTTGATAG+CGG | - | chr1.3:78441753-78441772 | MS.gene037408:CDS | 10.0% |
| !! | AAAAAAATATGAAAGAAAAG+AGG | + | chr1.3:78444155-78444174 | None:intergenic | 15.0% |
| !! | AGAAACATAAGATAATAAAT+AGG | + | chr1.3:78444721-78444740 | None:intergenic | 15.0% |
| !! | CAATGATTAATAACTATAAA+GGG | + | chr1.3:78444495-78444514 | None:intergenic | 15.0% |
| !! | TAAAAGTTATTATCTAACTT+TGG | - | chr1.3:78441720-78441739 | MS.gene037408:CDS | 15.0% |
| !! | TAAGAAACTTAAAAGAAAAA+AGG | + | chr1.3:78442687-78442706 | None:intergenic | 15.0% |
| !! | TATAATGCTACAAATATTAT+TGG | + | chr1.3:78447142-78447161 | None:intergenic | 15.0% |
| !! | TGAAATCTAATTTAATCATT+TGG | - | chr1.3:78443351-78443370 | MS.gene037408:intron | 15.0% |
| !! | TTTCTTCTATATAAATTTCT+AGG | - | chr1.3:78443614-78443633 | MS.gene037408:intron | 15.0% |
| !!! | AAAAGAGTTAATGAAAATTT+TGG | + | chr1.3:78442273-78442292 | None:intergenic | 15.0% |
| !!! | ATAACTATTTCATTTTTGTT+AGG | + | chr1.3:78446645-78446664 | None:intergenic | 15.0% |
| !!! | CTTTTTATTTTGAAAATGTT+AGG | - | chr1.3:78445907-78445926 | MS.gene037408:intron | 15.0% |
| !!! | TAATTCCTTTTTATTTTCTA+TGG | - | chr1.3:78444300-78444319 | MS.gene037408:intron | 15.0% |
| !!! | TTTTCATTAAAATGATTTTG+TGG | - | chr1.3:78443215-78443234 | MS.gene037408:CDS | 15.0% |
| !!! | TTTTTAAAGATACTACTATT+AGG | + | chr1.3:78445222-78445241 | None:intergenic | 15.0% |
| !! | AACATTATCATTATCATCAT+CGG | - | chr1.3:78443840-78443859 | MS.gene037408:intron | 20.0% |
| !! | AAGAAAGTTATATTCATTAC+CGG | - | chr1.3:78441785-78441804 | MS.gene037408:intron | 20.0% |
| !! | AATTTGATCAAATATCAATC+AGG | + | chr1.3:78447203-78447222 | None:intergenic | 20.0% |
| !! | AGATGAAAAGAAGAAAAATA+TGG | - | chr1.3:78446519-78446538 | MS.gene037408:intron | 20.0% |
| !! | ATAAGTGAAAATTCTTTCTT+AGG | + | chr1.3:78447385-78447404 | None:intergenic | 20.0% |
| !! | ATAATCTTAACAAGTTTACA+AGG | + | chr1.3:78445717-78445736 | None:intergenic | 20.0% |
| !! | ATAGATCCAAATTCAATAAA+TGG | + | chr1.3:78445146-78445165 | None:intergenic | 20.0% |
| !! | ATTAATGTGAGAAAAGAAAA+AGG | + | chr1.3:78447244-78447263 | None:intergenic | 20.0% |
| !! | ATTATAAAAGATAGATTCTG+TGG | - | chr1.3:78447156-78447175 | MS.gene037408:intron | 20.0% |
| !! | CAAGTTCATTATTTCATTAA+TGG | - | chr1.3:78444565-78444584 | MS.gene037408:CDS | 20.0% |
| !! | CCAATGATTAATAACTATAA+AGG | + | chr1.3:78444496-78444515 | None:intergenic | 20.0% |
| !! | CCTTTATAGTTATTAATCAT+TGG | - | chr1.3:78444493-78444512 | MS.gene037408:intron | 20.0% |
| !! | GTTTATGTAATATATGTTCT+AGG | + | chr1.3:78447035-78447054 | None:intergenic | 20.0% |
| !! | TGAAAACTATAAACTAAACT+TGG | - | chr1.3:78445818-78445837 | MS.gene037408:intron | 20.0% |
| !! | TTCATTCCATTTATTGAATT+TGG | - | chr1.3:78445137-78445156 | MS.gene037408:CDS | 20.0% |
| !!! | AAACAATCTGAATTTTGATT+TGG | - | chr1.3:78443425-78443444 | MS.gene037408:intron | 20.0% |
| !!! | ACCATATTTTTAGTTCAATA+CGG | + | chr1.3:78444857-78444876 | None:intergenic | 20.0% |
| !!! | AGTAAAAGTAATTTGATAGT+TGG | - | chr1.3:78445793-78445812 | MS.gene037408:intron | 20.0% |
| !!! | ATAGCAATTTTGTAAATTTG+AGG | + | chr1.3:78441990-78442009 | None:intergenic | 20.0% |
| !!! | TAGCAATTTTGTAAATTTGA+GGG | + | chr1.3:78441989-78442008 | None:intergenic | 20.0% |
| !!! | TGATACATTTTTAGTAAAGA+TGG | - | chr1.3:78442155-78442174 | MS.gene037408:intron | 20.0% |
| !!! | TGATCAATATTTACTTTTGT+AGG | - | chr1.3:78446847-78446866 | MS.gene037408:intron | 20.0% |
| !!! | TGTAAACTTGTTAAGATTAT+CGG | - | chr1.3:78445717-78445736 | MS.gene037408:intron | 20.0% |
| !!! | TTATTTTGAAAATGTTAGGA+TGG | - | chr1.3:78445911-78445930 | MS.gene037408:intron | 20.0% |
| ! | AACTTCATACACTAAAATGT+TGG | - | chr1.3:78447052-78447071 | MS.gene037408:intron | 25.0% |
| ! | AATAATGAACTTGAATGCTT+TGG | + | chr1.3:78444558-78444577 | None:intergenic | 25.0% |
| ! | ACCGTATTGAACTAAAAATA+TGG | - | chr1.3:78444853-78444872 | MS.gene037408:intron | 25.0% |
| ! | ACTATAACGATGATTTACTA+AGG | + | chr1.3:78441936-78441955 | None:intergenic | 25.0% |
| ! | ATACAAGATCTTTACTTAGA+AGG | - | chr1.3:78442550-78442569 | MS.gene037408:intron | 25.0% |
| ! | ATACATTAAGTGATCGAATT+CGG | + | chr1.3:78443391-78443410 | None:intergenic | 25.0% |
| ! | ATGATTCAAATTGATAGAGT+AGG | - | chr1.3:78443086-78443105 | MS.gene037408:intron | 25.0% |
| ! | ATGCTTATTATACTTGGTTA+AGG | + | chr1.3:78447316-78447335 | None:intergenic | 25.0% |
| ! | ATTATGCACGATTATTTGTA+TGG | - | chr1.3:78443903-78443922 | MS.gene037408:intron | 25.0% |
| ! | CATTTCTTGTAAATAAGAGA+CGG | + | chr1.3:78444785-78444804 | None:intergenic | 25.0% |
| ! | CCAAACCATAGAAAATAAAA+AGG | + | chr1.3:78444308-78444327 | None:intergenic | 25.0% |
| ! | CTATAACGATGATTTACTAA+GGG | + | chr1.3:78441935-78441954 | None:intergenic | 25.0% |
| ! | CTGTCTCTAATATAATTACA+AGG | + | chr1.3:78447423-78447442 | None:intergenic | 25.0% |
| ! | GAAACAGATTTATAAGACTT+TGG | + | chr1.3:78445858-78445877 | None:intergenic | 25.0% |
| ! | GTTATCTATCTTCCAAATAA+AGG | + | chr1.3:78442621-78442640 | None:intergenic | 25.0% |
| ! | TAACATGAATACAACTTTCT+GGG | + | chr1.3:78446602-78446621 | None:intergenic | 25.0% |
| ! | TACAAGATCTTTACTTAGAA+GGG | - | chr1.3:78442551-78442570 | MS.gene037408:intron | 25.0% |
| ! | TATTTCTCACTTAAAAGAAG+AGG | + | chr1.3:78444237-78444256 | None:intergenic | 25.0% |
| ! | TCTATTTACCATCCTTTATT+TGG | - | chr1.3:78442606-78442625 | MS.gene037408:intron | 25.0% |
| ! | TGACATTACTTCTTAAATTC+TGG | - | chr1.3:78445653-78445672 | MS.gene037408:intron | 25.0% |
| ! | TGCTTATTATACTTGGTTAA+GGG | + | chr1.3:78447315-78447334 | None:intergenic | 25.0% |
| ! | TGGAATATGCTTATTATACT+TGG | + | chr1.3:78447322-78447341 | None:intergenic | 25.0% |
| ! | TTATCTTATGTTTCTTCTTG+AGG | - | chr1.3:78444726-78444745 | MS.gene037408:intron | 25.0% |
| ! | TTATGACAAGTGGATAAAAA+TGG | + | chr1.3:78444334-78444353 | None:intergenic | 25.0% |
| !! | AAGCATTATTCCACTATTTT+TGG | + | chr1.3:78443487-78443506 | None:intergenic | 25.0% |
| !! | AAGTGAGAGTTAATCAATTT+TGG | + | chr1.3:78443282-78443301 | None:intergenic | 25.0% |
| !! | AGAATTTTCACTTATGATGT+TGG | - | chr1.3:78447390-78447409 | MS.gene037408:CDS | 25.0% |
| !! | ATTGACGTTCTTTGATTTAT+GGG | - | chr1.3:78442188-78442207 | MS.gene037408:CDS | 25.0% |
| !! | CTTAAATTCTGGTTAAAATG+TGG | - | chr1.3:78445664-78445683 | MS.gene037408:intron | 25.0% |
| !! | GTTTTTACAATCTTCTATAC+CGG | + | chr1.3:78443250-78443269 | None:intergenic | 25.0% |
| !! | TAATCAATTTTGGATGCTAT+TGG | + | chr1.3:78443272-78443291 | None:intergenic | 25.0% |
| !! | TTTTGGTCCTCAAAATTTTA+GGG | + | chr1.3:78442256-78442275 | None:intergenic | 25.0% |
| !! | TTTTTACAATCTTCTATACC+GGG | + | chr1.3:78443249-78443268 | None:intergenic | 25.0% |
| !!! | AGAAAAAGGTGTTTAGTATT+TGG | + | chr1.3:78447230-78447249 | None:intergenic | 25.0% |
| !!! | AGCATTATTCCACTATTTTT+GGG | + | chr1.3:78443486-78443505 | None:intergenic | 25.0% |
| !!! | ATTTTGGTCCTCAAAATTTT+AGG | + | chr1.3:78442257-78442276 | None:intergenic | 25.0% |
| !!! | CCTTTTTATTTTCTATGGTT+TGG | - | chr1.3:78444305-78444324 | MS.gene037408:intron | 25.0% |
| !!! | TATTGAGCTCTTATTTTCTA+AGG | + | chr1.3:78445565-78445584 | None:intergenic | 25.0% |
| !!! | TTTATATGCTTTTCAAGTCT+TGG | - | chr1.3:78443132-78443151 | MS.gene037408:CDS | 25.0% |
| AAAATATCAGAAGTCATTGG+AGG | - | chr1.3:78442847-78442866 | MS.gene037408:CDS | 30.0% | |
| AAACGAAAAGAAGTGACATA+TGG | + | chr1.3:78447342-78447361 | None:intergenic | 30.0% | |
| AACCATCACAAAAATACAGA+TGG | + | chr1.3:78444464-78444483 | None:intergenic | 30.0% | |
| AACCATTGTAGATAAGTTGT+GGG | - | chr1.3:78446803-78446822 | MS.gene037408:CDS | 30.0% | |
| AACTTACTAACCAAATCGTT+TGG | + | chr1.3:78445974-78445993 | None:intergenic | 30.0% | |
| AATAGGGTTTATTGGATTTG+AGG | + | chr1.3:78441485-78441504 | None:intergenic | 30.0% | |
| AATCTTCTTAATAGGACTCT+AGG | - | chr1.3:78446259-78446278 | MS.gene037408:intron | 30.0% | |
| AATTACAGAAACACAATCCA+AGG | + | chr1.3:78446752-78446771 | None:intergenic | 30.0% | |
| AGACTCAGACTATATATGTA+TGG | - | chr1.3:78443721-78443740 | MS.gene037408:intron | 30.0% | |
| ATTACAGAAACACAATCCAA+GGG | + | chr1.3:78446751-78446770 | None:intergenic | 30.0% | |
| ATTTACAAGAAATGCTGAGT+AGG | - | chr1.3:78444791-78444810 | MS.gene037408:intron | 30.0% | |
| ATTTACCATCACAAGTTTAG+AGG | - | chr1.3:78442056-78442075 | MS.gene037408:intron | 30.0% | |
| GATTGAAAATCAAACTGAAG+TGG | - | chr1.3:78447691-78447710 | MS.gene037408:CDS | 30.0% | |
| GTAACATGAATACAACTTTC+TGG | + | chr1.3:78446603-78446622 | None:intergenic | 30.0% | |
| GTAAGAAATGTAACAGATAG+AGG | + | chr1.3:78442977-78442996 | None:intergenic | 30.0% | |
| GTATCAAAAGTTCAAAACCA+CGG | + | chr1.3:78442141-78442160 | None:intergenic | 30.0% | |
| GTCAAAATATCAGAAGTCAT+TGG | - | chr1.3:78442844-78442863 | MS.gene037408:CDS | 30.0% | |
| TAAGAGAGAATTATGACAAG+TGG | + | chr1.3:78444344-78444363 | None:intergenic | 30.0% | |
| TAATGCTGGTAATTCCTATA+TGG | - | chr1.3:78446940-78446959 | MS.gene037408:intron | 30.0% | |
| TAATGTCATGATGTAGAAGA+TGG | + | chr1.3:78445641-78445660 | None:intergenic | 30.0% | |
| TATCTACAATGGTTGAAAGA+TGG | + | chr1.3:78446797-78446816 | None:intergenic | 30.0% | |
| TATGGTTTGATGCTTTACTA+GGG | - | chr1.3:78443739-78443758 | MS.gene037408:intron | 30.0% | |
| TCAATCAGGTAAAGATTTAG+TGG | + | chr1.3:78447189-78447208 | None:intergenic | 30.0% | |
| TCTATCTTCCAAATAAAGGA+TGG | + | chr1.3:78442617-78442636 | None:intergenic | 30.0% | |
| TCTGTTTAGATTGTCTTATC+CGG | + | chr1.3:78446502-78446521 | None:intergenic | 30.0% | |
| TGATTTACTAAGGGATGAAA+TGG | + | chr1.3:78441926-78441945 | None:intergenic | 30.0% | |
| TGTTACAAGCAATGAAAGTA+AGG | + | chr1.3:78446159-78446178 | None:intergenic | 30.0% | |
| TGTTCAACAAGAGTTTAGTA+AGG | + | chr1.3:78444000-78444019 | None:intergenic | 30.0% | |
| TTTACAGACATATGAGAGAT+TGG | + | chr1.3:78445111-78445130 | None:intergenic | 30.0% | |
| ! | AAGAAGACTCTGAAAAGTAA+AGG | - | chr1.3:78447737-78447756 | MS.gene037408:CDS | 30.0% |
| ! | AATTTTCTCACCATGTTCAT+CGG | + | chr1.3:78441813-78441832 | None:intergenic | 30.0% |
| ! | AGAACTATTTGAAGTTCTAG+AGG | + | chr1.3:78442589-78442608 | None:intergenic | 30.0% |
| ! | AGAAGACTCTGAAAAGTAAA+GGG | - | chr1.3:78447738-78447757 | MS.gene037408:CDS | 30.0% |
| ! | ATAGCCTTTTCCTAGTATTT+GGG | + | chr1.3:78444375-78444394 | None:intergenic | 30.0% |
| ! | ATTCTGGTTAAAATGTGGTT+AGG | - | chr1.3:78445669-78445688 | MS.gene037408:intron | 30.0% |
| ! | CAAAACCTCTTTCACTATTT+TGG | - | chr1.3:78446231-78446250 | MS.gene037408:intron | 30.0% |
| ! | CAACTTAGATAGATCGTTTT+AGG | - | chr1.3:78446546-78446565 | MS.gene037408:intron | 30.0% |
| ! | CACAAAAATACAGATGGATT+TGG | + | chr1.3:78444458-78444477 | None:intergenic | 30.0% |
| ! | GATTGACGTTCTTTGATTTA+TGG | - | chr1.3:78442187-78442206 | MS.gene037408:CDS | 30.0% |
| ! | GGAATACATTTGAAGCATTA+CGG | + | chr1.3:78445544-78445563 | None:intergenic | 30.0% |
| ! | TAAATTTCTAGGTTCAAACC+TGG | - | chr1.3:78443625-78443644 | MS.gene037408:intron | 30.0% |
| ! | TTCTGGTTAAAATGTGGTTA+GGG | - | chr1.3:78445670-78445689 | MS.gene037408:intron | 30.0% |
| ! | TTTTCAATCCTAGCAAAGAT+TGG | + | chr1.3:78447680-78447699 | None:intergenic | 30.0% |
| !! | AACGATTTGGTTAGTAAGTT+TGG | - | chr1.3:78445974-78445993 | MS.gene037408:intron | 30.0% |
| !! | AATGTATTGCTATTTGATGC+AGG | - | chr1.3:78442733-78442752 | MS.gene037408:intron | 30.0% |
| !! | ACGATTTGGTTAGTAAGTTT+GGG | - | chr1.3:78445975-78445994 | MS.gene037408:intron | 30.0% |
| !! | ATAAAACTTGCTAACACTGT+TGG | + | chr1.3:78445596-78445615 | None:intergenic | 30.0% |
| !! | ATATGTCACTTCTTTTCGTT+TGG | - | chr1.3:78447341-78447360 | MS.gene037408:CDS | 30.0% |
| !! | ATCCATCTGTATTTTTGTGA+TGG | - | chr1.3:78444459-78444478 | MS.gene037408:intron | 30.0% |
| !! | GTTGTACTCATAACTTGTTA+AGG | - | chr1.3:78444264-78444283 | MS.gene037408:intron | 30.0% |
| !! | TATGTCACTTCTTTTCGTTT+GGG | - | chr1.3:78447342-78447361 | MS.gene037408:CDS | 30.0% |
| !! | TCATAACTTGTTAAGGTAGA+AGG | - | chr1.3:78444271-78444290 | MS.gene037408:intron | 30.0% |
| !! | TTAATTTGATAGCGGCTATT+GGG | - | chr1.3:78441761-78441780 | MS.gene037408:CDS | 30.0% |
| !! | TTTAATTTGATAGCGGCTAT+TGG | - | chr1.3:78441760-78441779 | MS.gene037408:CDS | 30.0% |
| !!! | GCATTATTCCACTATTTTTG+GGG | + | chr1.3:78443485-78443504 | None:intergenic | 30.0% |
| !!! | TAATGGTTTTGTTACTCTGT+AGG | - | chr1.3:78444582-78444601 | MS.gene037408:CDS | 30.0% |
| AAACAAGCTCAAGAAGTTGT+TGG | - | chr1.3:78447767-78447786 | MS.gene037408:CDS | 35.0% | |
| AAACTGAAGTGGAAGACAAA+GGG | - | chr1.3:78447702-78447721 | MS.gene037408:CDS | 35.0% | |
| AAAGCTAATAGAATAGAGCC+AGG | + | chr1.3:78443808-78443827 | None:intergenic | 35.0% | |
| AAATTCCCTCATAATCAGCT+CGG | + | chr1.3:78442446-78442465 | None:intergenic | 35.0% | |
| AACTGCATATCATCTCTTTC+AGG | - | chr1.3:78443542-78443561 | MS.gene037408:intron | 35.0% | |
| AAGCTAATAGAATAGAGCCA+GGG | + | chr1.3:78443807-78443826 | None:intergenic | 35.0% | |
| AATAAAACGAGAATGCTGCT+CGG | - | chr1.3:78445077-78445096 | MS.gene037408:CDS | 35.0% | |
| AATTTATTGTGTCAGCTGTG+AGG | - | chr1.3:78442461-78442480 | MS.gene037408:intron | 35.0% | |
| ACCTATTATCTAACTTCCGT+GGG | - | chr1.3:78441674-78441693 | MS.gene037408:CDS | 35.0% | |
| AGACATATGAGAGATTGGAA+TGG | + | chr1.3:78445106-78445125 | None:intergenic | 35.0% | |
| AGCTGCACATACAAAAAGAA+AGG | + | chr1.3:78444032-78444051 | None:intergenic | 35.0% | |
| AGTCAAAATCTCGTTCTACT+CGG | - | chr1.3:78444406-78444425 | MS.gene037408:intron | 35.0% | |
| ATGTTAGGATGGTATGAAGA+TGG | - | chr1.3:78445922-78445941 | MS.gene037408:intron | 35.0% | |
| ATTCCTTTACCTCGTGTAAA+CGG | + | chr1.3:78442913-78442932 | None:intergenic | 35.0% | |
| ATTGGAACGAAGTGAAAGAA+TGG | + | chr1.3:78441454-78441473 | None:intergenic | 35.0% | |
| ATTGTAGAGAGATACCAAGT+GGG | - | chr1.3:78447616-78447635 | MS.gene037408:CDS | 35.0% | |
| ATTTACCGAGCTGATTATGA+GGG | - | chr1.3:78442438-78442457 | MS.gene037408:intron | 35.0% | |
| CAACCATTGTAGATAAGTTG+TGG | - | chr1.3:78446802-78446821 | MS.gene037408:CDS | 35.0% | |
| CTTACATACTGCAATTCAAG+CGG | - | chr1.3:78442992-78443011 | MS.gene037408:intron | 35.0% | |
| CTTGTGAAATGAGATTGCAA+TGG | + | chr1.3:78441874-78441893 | None:intergenic | 35.0% | |
| CTTTCAGGAGAACTTCAAAT+GGG | - | chr1.3:78443557-78443576 | MS.gene037408:intron | 35.0% | |
| GAAACGGTGTTTAGTAAATC+AGG | + | chr1.3:78444087-78444106 | None:intergenic | 35.0% | |
| GAGATGGAAATAGGGTTTAT+TGG | + | chr1.3:78441493-78441512 | None:intergenic | 35.0% | |
| GGCTACTCAAGTAAAACATT+AGG | - | chr1.3:78442110-78442129 | MS.gene037408:intron | 35.0% | |
| GGTAACGATTGTGTCAAAAT+AGG | - | chr1.3:78445301-78445320 | MS.gene037408:intron | 35.0% | |
| GTATGGTTTGATGCTTTACT+AGG | - | chr1.3:78443738-78443757 | MS.gene037408:intron | 35.0% | |
| TAAAACATTAGGTCTTTCCG+TGG | - | chr1.3:78442121-78442140 | MS.gene037408:intron | 35.0% | |
| TACCTATTATCTAACTTCCG+TGG | - | chr1.3:78441673-78441692 | MS.gene037408:CDS | 35.0% | |
| TAGAACCTCTAAACTTGTGA+TGG | + | chr1.3:78442064-78442083 | None:intergenic | 35.0% | |
| TATAGTCAACCCCAAATACT+AGG | - | chr1.3:78444362-78444381 | MS.gene037408:intron | 35.0% | |
| TATATTCTCGAACTCAAGCT+CGG | + | chr1.3:78447481-78447500 | None:intergenic | 35.0% | |
| TATGTAGTTACACGACCTTA+AGG | + | chr1.3:78443194-78443213 | None:intergenic | 35.0% | |
| TCGTGAAATACCTATATCAC+AGG | + | chr1.3:78443523-78443542 | None:intergenic | 35.0% | |
| TCTTTCAGGAGAACTTCAAA+TGG | - | chr1.3:78443556-78443575 | MS.gene037408:intron | 35.0% | |
| TGCATGATTGAAAACTGAAG+TGG | + | chr1.3:78444988-78445007 | None:intergenic | 35.0% | |
| TGGCAGGAAATCTTCTTAAT+AGG | - | chr1.3:78446251-78446270 | MS.gene037408:intron | 35.0% | |
| TGTTACAAGCAATGAAAGCA+AGG | + | chr1.3:78446123-78446142 | None:intergenic | 35.0% | |
| TGTTAGGATGGTATGAAGAT+GGG | - | chr1.3:78445923-78445942 | MS.gene037408:intron | 35.0% | |
| TTAAGTGATCGAATTCGGAT+TGG | + | chr1.3:78443386-78443405 | None:intergenic | 35.0% | |
| TTACACGAGGTAAAGGAATA+TGG | - | chr1.3:78442914-78442933 | MS.gene037408:CDS | 35.0% | |
| TTACATACTGCAATTCAAGC+GGG | - | chr1.3:78442993-78443012 | MS.gene037408:intron | 35.0% | |
| TTACTAAACACCGTTTCTTC+AGG | - | chr1.3:78444090-78444109 | MS.gene037408:intron | 35.0% | |
| TTGATCAACCTTTGTGTTAC+AGG | + | chr1.3:78446834-78446853 | None:intergenic | 35.0% | |
| TTTGAGGGACTAAATTGATG+AGG | + | chr1.3:78441974-78441993 | None:intergenic | 35.0% | |
| ! | ACTTCAGTTTTCAATCATGC+AGG | - | chr1.3:78444987-78445006 | MS.gene037408:intron | 35.0% |
| ! | GATAGCCTTTTCCTAGTATT+TGG | + | chr1.3:78444376-78444395 | None:intergenic | 35.0% |
| ! | GCTCAAAGTACCAATTGTAT+TGG | + | chr1.3:78446101-78446120 | None:intergenic | 35.0% |
| ! | TAGCCTTTTCCTAGTATTTG+GGG | + | chr1.3:78444374-78444393 | None:intergenic | 35.0% |
| ! | TGTACAGTTCACAATGGTTT+TGG | + | chr1.3:78444944-78444963 | None:intergenic | 35.0% |
| !! | TATGTTCTAGGAGAATACCT+TGG | + | chr1.3:78447023-78447042 | None:intergenic | 35.0% |
| !! | TTGACGAAGGTATTAGTACT+CGG | - | chr1.3:78444694-78444713 | MS.gene037408:intron | 35.0% |
| !! | TTTGCTGTTTCGTAAAATCG+AGG | - | chr1.3:78442216-78442235 | MS.gene037408:CDS | 35.0% |
| !!! | AAGGTGATAGTTTTAACTCG+AGG | - | chr1.3:78442489-78442508 | MS.gene037408:intron | 35.0% |
| !!! | AATTTTAGGGTGGAGCAATT+TGG | + | chr1.3:78442243-78442262 | None:intergenic | 35.0% |
| !!! | AGTTCACAATGGTTTTGGTT+TGG | + | chr1.3:78444939-78444958 | None:intergenic | 35.0% |
| AAAGAACTGCCAATCAACAC+TGG | - | chr1.3:78446291-78446310 | MS.gene037408:CDS | 40.0% | |
| AAAGATGGCTGCACAAAGTT+TGG | + | chr1.3:78442890-78442909 | None:intergenic | 40.0% | |
| AACCTCAACCAATCTTTGCT+AGG | - | chr1.3:78447669-78447688 | MS.gene037408:CDS | 40.0% | |
| AACTGAAGTGGAAGACAAAG+GGG | - | chr1.3:78447703-78447722 | MS.gene037408:CDS | 40.0% | |
| ACCCACGGAAGTTAGATAAT+AGG | + | chr1.3:78441678-78441697 | None:intergenic | 40.0% | |
| ACTTGGATTGACATGCTTTC+AGG | - | chr1.3:78445447-78445466 | MS.gene037408:CDS | 40.0% | |
| AGAAGAAGGGAGATGGAAAT+AGG | + | chr1.3:78441502-78441521 | None:intergenic | 40.0% | |
| AGCAGTTTCACCTGTGATAT+AGG | - | chr1.3:78443510-78443529 | MS.gene037408:intron | 40.0% | |
| AGCCTTCCCAAAATGGTATA+CGG | - | chr1.3:78444661-78444680 | MS.gene037408:intron | 40.0% | |
| AGGTGGAATTTGGCAATGAT+GGG | - | chr1.3:78446029-78446048 | MS.gene037408:intron | 40.0% | |
| AGTAACAGGAGATAGTGCAA+TGG | + | chr1.3:78447458-78447477 | None:intergenic | 40.0% | |
| ATAAAACAAGCCTACCGACA+AGG | + | chr1.3:78443316-78443335 | None:intergenic | 40.0% | |
| ATACCTTCGTCAAGAATCCA+TGG | + | chr1.3:78444687-78444706 | None:intergenic | 40.0% | |
| ATGAATACAACTTTCTGGGC+AGG | + | chr1.3:78446598-78446617 | None:intergenic | 40.0% | |
| CAAACTGAAGTGGAAGACAA+AGG | - | chr1.3:78447701-78447720 | MS.gene037408:CDS | 40.0% | |
| CAACCCCAAATACTAGGAAA+AGG | - | chr1.3:78444368-78444387 | MS.gene037408:intron | 40.0% | |
| CAAGCATGAAGCAATTGTGA+AGG | - | chr1.3:78442383-78442402 | MS.gene037408:intron | 40.0% | |
| CATTGTAGAGAGATACCAAG+TGG | - | chr1.3:78447615-78447634 | MS.gene037408:CDS | 40.0% | |
| CATTTACCGAGCTGATTATG+AGG | - | chr1.3:78442437-78442456 | MS.gene037408:intron | 40.0% | |
| CTATTTGATGCAGGATGAGA+AGG | - | chr1.3:78442742-78442761 | MS.gene037408:intron | 40.0% | |
| CTCCCACAACTTATCTACAA+TGG | + | chr1.3:78446808-78446827 | None:intergenic | 40.0% | |
| CTTGCTTAAAGAGAGACCAA+GGG | + | chr1.3:78446976-78446995 | None:intergenic | 40.0% | |
| GAAGAAACCAAACAAACCCA+CGG | + | chr1.3:78441693-78441712 | None:intergenic | 40.0% | |
| GAAGAAGGGAGATGGAAATA+GGG | + | chr1.3:78441501-78441520 | None:intergenic | 40.0% | |
| GAAGTGGTAATTGAGCAGTT+CGG | + | chr1.3:78444972-78444991 | None:intergenic | 40.0% | |
| GCACATCTTGCCAATACAAT+TGG | - | chr1.3:78446088-78446107 | MS.gene037408:intron | 40.0% | |
| GTTCAAACCTGGATCAATAG+TGG | - | chr1.3:78443636-78443655 | MS.gene037408:intron | 40.0% | |
| GTTTAGATTGTCTTATCCGG+TGG | + | chr1.3:78446499-78446518 | None:intergenic | 40.0% | |
| TAAAACAAGCCTACCGACAA+GGG | + | chr1.3:78443315-78443334 | None:intergenic | 40.0% | |
| TAAACACCGTTTCTTCAGGT+TGG | - | chr1.3:78444094-78444113 | MS.gene037408:intron | 40.0% | |
| TAACCTCAAACTGCTGCATA+AGG | + | chr1.3:78446433-78446452 | None:intergenic | 40.0% | |
| TAAGATAGAGAGAGATACCC+AGG | + | chr1.3:78447545-78447564 | None:intergenic | 40.0% | |
| TACACTGCACTTGATTGGTA+AGG | - | chr1.3:78444122-78444141 | MS.gene037408:intron | 40.0% | |
| TACGCTTGAACCAAACGATT+TGG | - | chr1.3:78445961-78445980 | MS.gene037408:intron | 40.0% | |
| TAGATACTTCTTCCTCAGAG+AGG | - | chr1.3:78446009-78446028 | MS.gene037408:intron | 40.0% | |
| TAGCATAGCTGGCCAATAAA+CGG | + | chr1.3:78444626-78444645 | None:intergenic | 40.0% | |
| TCACTGCTTCTTTGTTGCAT+TGG | - | chr1.3:78445422-78445441 | MS.gene037408:intron | 40.0% | |
| TCCTCTTTCCTTGAAACACA+AGG | + | chr1.3:78442806-78442825 | None:intergenic | 40.0% | |
| TCCTGCCAAAATAGTGAAAG+AGG | + | chr1.3:78446239-78446258 | None:intergenic | 40.0% | |
| TCCTTGAAACACAAGGCTTA+AGG | + | chr1.3:78442799-78442818 | None:intergenic | 40.0% | |
| TCGAGAATATATGCACAGCT+TGG | - | chr1.3:78447490-78447509 | MS.gene037408:intron | 40.0% | |
| TGAACAGTCTCTAGTGAATG+TGG | + | chr1.3:78443052-78443071 | None:intergenic | 40.0% | |
| TGAATACAACTTTCTGGGCA+GGG | + | chr1.3:78446597-78446616 | None:intergenic | 40.0% | |
| TGCAGAAGGAAATGCATTCA+AGG | - | chr1.3:78446333-78446352 | MS.gene037408:CDS | 40.0% | |
| TGGTTAAAATGTGGTTAGGG+TGG | - | chr1.3:78445673-78445692 | MS.gene037408:intron | 40.0% | |
| TGTCAGCTGTGAGGAATATA+AGG | - | chr1.3:78442470-78442489 | MS.gene037408:intron | 40.0% | |
| TTAAAATGTGGTTAGGGTGG+TGG | - | chr1.3:78445676-78445695 | MS.gene037408:intron | 40.0% | |
| TTCACTTATGATGTTGGAGC+AGG | - | chr1.3:78447396-78447415 | MS.gene037408:CDS | 40.0% | |
| TTCGTCATCATTTGAGGAAG+TGG | + | chr1.3:78441553-78441572 | None:intergenic | 40.0% | |
| TTGAAACACAAGGCTTAAGG+TGG | + | chr1.3:78442796-78442815 | None:intergenic | 40.0% | |
| TTGACATGCTTTCAGGCTAT+TGG | - | chr1.3:78445454-78445473 | MS.gene037408:CDS | 40.0% | |
| TTGCTTAAAGAGAGACCAAG+GGG | + | chr1.3:78446975-78446994 | None:intergenic | 40.0% | |
| TTGTAGAGAGATACCAAGTG+GGG | - | chr1.3:78447617-78447636 | MS.gene037408:CDS | 40.0% | |
| TTTCCGTTTACACGAGGTAA+AGG | - | chr1.3:78442907-78442926 | MS.gene037408:CDS | 40.0% | |
| ! | ACCTTAAGCCTTGTGTTTCA+AGG | - | chr1.3:78442795-78442814 | MS.gene037408:intron | 40.0% |
| ! | AGACTTTGGTTAGTCACAGA+AGG | + | chr1.3:78445844-78445863 | None:intergenic | 40.0% |
| ! | ATAGTCTGAGTCTTGTCACT+CGG | + | chr1.3:78443714-78443733 | None:intergenic | 40.0% |
| ! | ATCCTAGCAAAGATTGGTTG+AGG | + | chr1.3:78447674-78447693 | None:intergenic | 40.0% |
| ! | CCTGAACTTTGAAGGAAACT+GGG | - | chr1.3:78445280-78445299 | MS.gene037408:intron | 40.0% |
| ! | CTTTTTCTGTCTTCCCTTGT+CGG | - | chr1.3:78443299-78443318 | MS.gene037408:intron | 40.0% |
| ! | GATTTTGTGGTCATACATCC+CGG | - | chr1.3:78443228-78443247 | MS.gene037408:CDS | 40.0% |
| ! | GGATTTGAGGTGAGAAACAT+TGG | + | chr1.3:78441472-78441491 | None:intergenic | 40.0% |
| ! | TACGTTTCCATGCCGTTTAT+TGG | - | chr1.3:78444611-78444630 | MS.gene037408:intron | 40.0% |
| ! | TCCTGAACTTTGAAGGAAAC+TGG | - | chr1.3:78445279-78445298 | MS.gene037408:intron | 40.0% |
| ! | TGAAAGCATGTCAATCCAAG+TGG | + | chr1.3:78445448-78445467 | None:intergenic | 40.0% |
| ! | TGCTCCACCCTAAAATTTTG+AGG | - | chr1.3:78442246-78442265 | MS.gene037408:CDS | 40.0% |
| ! | TTAGGGTGGTGGTATATGAT+TGG | - | chr1.3:78445687-78445706 | MS.gene037408:intron | 40.0% |
| ! | TTAGTAAATCAGGTTGCTCC+TGG | + | chr1.3:78444077-78444096 | None:intergenic | 40.0% |
| !! | ATTTTTGGGGAAGCATGCAT+GGG | + | chr1.3:78443472-78443491 | None:intergenic | 40.0% |
| !! | GTTTGGTGTACAGTTCACAA+TGG | + | chr1.3:78444950-78444969 | None:intergenic | 40.0% |
| !! | GTTTTGATGCAGCAAGAGAT+CGG | - | chr1.3:78442089-78442108 | MS.gene037408:intron | 40.0% |
| !! | TGACGAAGGTATTAGTACTC+GGG | - | chr1.3:78444695-78444714 | MS.gene037408:intron | 40.0% |
| !! | TGGTCCTCAAAATTTTAGGG+TGG | + | chr1.3:78442253-78442272 | None:intergenic | 40.0% |
| !!! | ACCTCTTTCACTATTTTGGC+AGG | - | chr1.3:78446235-78446254 | MS.gene037408:intron | 40.0% |
| !!! | TATTTTTGGGGAAGCATGCA+TGG | + | chr1.3:78443473-78443492 | None:intergenic | 40.0% |
| AACAGGTATGCCCCAATCAA+CGG | + | chr1.3:78443691-78443710 | None:intergenic | 45.0% | |
| ACACAAGGCTTAAGGTGGAT+CGG | + | chr1.3:78442791-78442810 | None:intergenic | 45.0% | |
| ACCTCGTGTAAACGGAAAGA+TGG | + | chr1.3:78442905-78442924 | None:intergenic | 45.0% | |
| ACTGCCTCTCAATCTGATGA+TGG | - | chr1.3:78442639-78442658 | MS.gene037408:intron | 45.0% | |
| AGCTCGGTAAATGTCACCAT+TGG | + | chr1.3:78442430-78442449 | None:intergenic | 45.0% | |
| AGTTCATCGCACAATTGCAG+CGG | + | chr1.3:78444899-78444918 | None:intergenic | 45.0% | |
| ATACTTCTTCCTCAGAGAGG+TGG | - | chr1.3:78446012-78446031 | MS.gene037408:intron | 45.0% | |
| ATGAAGATGGGCAAGTCACT+AGG | - | chr1.3:78445935-78445954 | MS.gene037408:intron | 45.0% | |
| ATGAGATTGCAATGGTCCGT+AGG | + | chr1.3:78441866-78441885 | None:intergenic | 45.0% | |
| ATGCCTTATGCAGCAGTTTG+AGG | - | chr1.3:78446427-78446446 | MS.gene037408:CDS | 45.0% | |
| CAACCAGTTAGCACTCCTTA+AGG | - | chr1.3:78443176-78443195 | MS.gene037408:CDS | 45.0% | |
| CAACGACTCCTGAACTTTGA+AGG | - | chr1.3:78445272-78445291 | MS.gene037408:intron | 45.0% | |
| CACAAGCTTACAAGACGCTT+TGG | - | chr1.3:78441888-78441907 | MS.gene037408:intron | 45.0% | |
| CAGCTATGCTAATGTCTGCT+GGG | - | chr1.3:78444635-78444654 | MS.gene037408:intron | 45.0% | |
| CATTCAAGGACAATGTAGCG+AGG | - | chr1.3:78446347-78446366 | MS.gene037408:CDS | 45.0% | |
| CCCAGTTTCCTTCAAAGTTC+AGG | + | chr1.3:78445283-78445302 | None:intergenic | 45.0% | |
| CCTGTTCATGGTTCAGTCAT+GGG | - | chr1.3:78444814-78444833 | MS.gene037408:intron | 45.0% | |
| CCTTGCTTAAAGAGAGACCA+AGG | + | chr1.3:78446977-78446996 | None:intergenic | 45.0% | |
| CCTTGGTCTCTCTTTAAGCA+AGG | - | chr1.3:78446974-78446993 | MS.gene037408:intron | 45.0% | |
| CTGCCTCTCAATCTGATGAT+GGG | - | chr1.3:78442640-78442659 | MS.gene037408:intron | 45.0% | |
| GAACAGAACAAACTGACCCT+TGG | - | chr1.3:78446732-78446751 | MS.gene037408:CDS | 45.0% | |
| GACAGACACTGTTGCGTTAA+GGG | + | chr1.3:78442018-78442037 | None:intergenic | 45.0% | |
| GAGGTGGAATTTGGCAATGA+TGG | - | chr1.3:78446028-78446047 | MS.gene037408:intron | 45.0% | |
| GCAATTGTGCGATGAACTGT+CGG | - | chr1.3:78444901-78444920 | MS.gene037408:intron | 45.0% | |
| GCATGCTTCCCCAAAAATAG+TGG | - | chr1.3:78443474-78443493 | MS.gene037408:intron | 45.0% | |
| GCCTTGTGTTTCAAGGAAAG+AGG | - | chr1.3:78442802-78442821 | MS.gene037408:intron | 45.0% | |
| GGCGTTAACGTAGTAAAGAG+GGG | + | chr1.3:78441592-78441611 | None:intergenic | 45.0% | |
| GGGCGTTAACGTAGTAAAGA+GGG | + | chr1.3:78441593-78441612 | None:intergenic | 45.0% | |
| GGTAATTGAGCAGTTCGGTT+TGG | + | chr1.3:78444967-78444986 | None:intergenic | 45.0% | |
| GGTGGAATTTGGCAATGATG+GGG | - | chr1.3:78446030-78446049 | MS.gene037408:intron | 45.0% | |
| GTAGGGTTCGTCATCATTTG+AGG | + | chr1.3:78441559-78441578 | None:intergenic | 45.0% | |
| GTGGCAGGTGAATTAAACAC+AGG | + | chr1.3:78446480-78446499 | None:intergenic | 45.0% | |
| GTGTTTAATTCACCTGCCAC+CGG | - | chr1.3:78446480-78446499 | MS.gene037408:intron | 45.0% | |
| TCTACTCGGTAATCTCCATC+TGG | - | chr1.3:78444420-78444439 | MS.gene037408:intron | 45.0% | |
| TCTCCCATCATCAGATTGAG+AGG | + | chr1.3:78442646-78442665 | None:intergenic | 45.0% | |
| TGAGATTGCAATGGTCCGTA+GGG | + | chr1.3:78441865-78441884 | None:intergenic | 45.0% | |
| TGGTCTCTCTTTAAGCAAGG+AGG | - | chr1.3:78446977-78446996 | MS.gene037408:intron | 45.0% | |
| TGGTGTGTAAGTACTCCAGA+TGG | + | chr1.3:78444438-78444457 | None:intergenic | 45.0% | |
| TGTGCATCTCTAACTTTCCC+TGG | - | chr1.3:78443787-78443806 | MS.gene037408:intron | 45.0% | |
| TTCCTCAGAGAGGTGGAATT+TGG | - | chr1.3:78446019-78446038 | MS.gene037408:intron | 45.0% | |
| ! | ACCAATTTGAAGCAGCAACC+TGG | - | chr1.3:78447524-78447543 | MS.gene037408:intron | 45.0% |
| ! | CAATGATGGGGACTATTCAG+AGG | - | chr1.3:78446042-78446061 | MS.gene037408:intron | 45.0% |
| ! | CCAATTTGAAGCAGCAACCT+GGG | - | chr1.3:78447525-78447544 | MS.gene037408:intron | 45.0% |
| ! | CCATGGCCGTATACCATTTT+GGG | + | chr1.3:78444670-78444689 | None:intergenic | 45.0% |
| ! | CTAACTTCCGTGGGTTTGTT+TGG | - | chr1.3:78441683-78441702 | MS.gene037408:CDS | 45.0% |
| ! | TCCATGGCCGTATACCATTT+TGG | + | chr1.3:78444671-78444690 | None:intergenic | 45.0% |
| ! | TCTTTGTTGCATTGGCCACT+TGG | - | chr1.3:78445430-78445449 | MS.gene037408:intron | 45.0% |
| !! | AATCCACTGCCAGTGTTGAT+TGG | + | chr1.3:78446303-78446322 | None:intergenic | 45.0% |
| !! | CTTAAGGAGTGCTAACTGGT+TGG | + | chr1.3:78443178-78443197 | None:intergenic | 45.0% |
| !! | GTTCTGGAGATTGGTAATGC+TGG | - | chr1.3:78446926-78446945 | MS.gene037408:intron | 45.0% |
| !! | TATTCGAGAGTGCTTGCCAA+TGG | - | chr1.3:78442411-78442430 | MS.gene037408:intron | 45.0% |
| !!! | TATCTTTAAAAAATAATTAT+CGG | - | chr1.3:78445230-78445249 | MS.gene037408:intron | 5.0% |
| AGATTGTCTTATCCGGTGGC+AGG | + | chr1.3:78446495-78446514 | None:intergenic | 50.0% | |
| AGCCTCACAAGCTGATGTCA+GGG | + | chr1.3:78446906-78446925 | None:intergenic | 50.0% | |
| AGCTGGCCAACCTGAAGAAA+CGG | + | chr1.3:78444103-78444122 | None:intergenic | 50.0% | |
| AGGTACCTGAAAGCGAGCAA+TGG | + | chr1.3:78441658-78441677 | None:intergenic | 50.0% | |
| ATCAACGGATGCTCGGGAAA+TGG | + | chr1.3:78443676-78443695 | None:intergenic | 50.0% | |
| ATCAGCACTAGCTGATGACC+AGG | - | chr1.3:78444056-78444075 | MS.gene037408:intron | 50.0% | |
| ATCAGCTTGTGAGGCTGTTC+TGG | - | chr1.3:78446910-78446929 | MS.gene037408:intron | 50.0% | |
| ATCGCACAATTGCAGCGGTT+TGG | + | chr1.3:78444894-78444913 | None:intergenic | 50.0% | |
| ATGCACAGCTTGGCTATTCC+AGG | - | chr1.3:78447500-78447519 | MS.gene037408:intron | 50.0% | |
| ATGCTGAGTAGGCCTGTTCA+TGG | - | chr1.3:78444802-78444821 | MS.gene037408:intron | 50.0% | |
| CCAATCAAGTGCAGTGTAGC+TGG | + | chr1.3:78444120-78444139 | None:intergenic | 50.0% | |
| CCAGCAGACATTAGCATAGC+TGG | + | chr1.3:78444637-78444656 | None:intergenic | 50.0% | |
| CCAGCTACACTGCACTTGAT+TGG | - | chr1.3:78444117-78444136 | MS.gene037408:intron | 50.0% | |
| CCAGCTATGCTAATGTCTGC+TGG | - | chr1.3:78444634-78444653 | MS.gene037408:intron | 50.0% | |
| CCCAAAATGGTATACGGCCA+TGG | - | chr1.3:78444667-78444686 | MS.gene037408:intron | 50.0% | |
| CCCATGACTGAACCATGAAC+AGG | + | chr1.3:78444817-78444836 | None:intergenic | 50.0% | |
| CGACAGACACTGTTGCGTTA+AGG | + | chr1.3:78442019-78442038 | None:intergenic | 50.0% | |
| CTGGATCAATAGTGGCCTGA+GGG | - | chr1.3:78443644-78443663 | MS.gene037408:intron | 50.0% | |
| GAAAATTGCAACTGCTGCCG+TGG | - | chr1.3:78441826-78441845 | MS.gene037408:intron | 50.0% | |
| GAACTCAAGCTCGGAGTAAC+AGG | + | chr1.3:78447472-78447491 | None:intergenic | 50.0% | |
| GAAGACAAAGGGGTTGCAGT+CGG | - | chr1.3:78447713-78447732 | MS.gene037408:CDS | 50.0% | |
| GAGATTGCAATGGTCCGTAG+GGG | + | chr1.3:78441864-78441883 | None:intergenic | 50.0% | |
| GAGCATTTGCAGAACAGAGC+TGG | + | chr1.3:78441531-78441550 | None:intergenic | 50.0% | |
| GCCATCTTTCCGTTTACACG+AGG | - | chr1.3:78442901-78442920 | MS.gene037408:CDS | 50.0% | |
| GCCTGTTCATGGTTCAGTCA+TGG | - | chr1.3:78444813-78444832 | MS.gene037408:intron | 50.0% | |
| GGGAAATGGAAAAGTCCCTC+AGG | + | chr1.3:78443662-78443681 | None:intergenic | 50.0% | |
| GTCTTGGAGAAGAAGGGAGA+TGG | + | chr1.3:78441509-78441528 | None:intergenic | 50.0% | |
| GTTAACGCCCCTCCTCATAT+GGG | - | chr1.3:78441603-78441622 | MS.gene037408:intron | 50.0% | |
| TAGAGAGATACCAAGTGGGG+TGG | - | chr1.3:78447620-78447639 | MS.gene037408:CDS | 50.0% | |
| TAGCGAGGCTGGTAAAGTCT+AGG | - | chr1.3:78446362-78446381 | MS.gene037408:CDS | 50.0% | |
| TAGCTGGCCAATAAACGGCA+TGG | + | chr1.3:78444621-78444640 | None:intergenic | 50.0% | |
| TCAACCGTGTGCTCAATGCT+AGG | + | chr1.3:78445482-78445501 | None:intergenic | 50.0% | |
| TGCACAGCTTGGCTATTCCA+GGG | - | chr1.3:78447501-78447520 | MS.gene037408:intron | 50.0% | |
| TGCCAAATTCCACCTCTCTG+AGG | + | chr1.3:78446024-78446043 | None:intergenic | 50.0% | |
| TGGGCTAAGCCTTCCCAAAA+TGG | - | chr1.3:78444654-78444673 | MS.gene037408:intron | 50.0% | |
| TTCTGTCTTCCCTTGTCGGT+AGG | - | chr1.3:78443303-78443322 | MS.gene037408:intron | 50.0% | |
| TTTCCCGAGCATCCGTTGAT+TGG | - | chr1.3:78443676-78443695 | MS.gene037408:intron | 50.0% | |
| ! | AACACTGGCAGTGGATTCCA+CGG | - | chr1.3:78446306-78446325 | MS.gene037408:CDS | 50.0% |
| ! | AAGAGGGGTTGTGATGACGT+AGG | + | chr1.3:78441577-78441596 | None:intergenic | 50.0% |
| ! | ACCAAGTGGGGTGGACTTAA+GGG | - | chr1.3:78447629-78447648 | MS.gene037408:CDS | 50.0% |
| ! | AGAGGGGTTGTGATGACGTA+GGG | + | chr1.3:78441576-78441595 | None:intergenic | 50.0% |
| ! | CCCAGGTTGCTGCTTCAAAT+TGG | + | chr1.3:78447528-78447547 | None:intergenic | 50.0% |
| ! | GATTGGTTGAGGTTGAGCCA+TGG | + | chr1.3:78447663-78447682 | None:intergenic | 50.0% |
| ! | GGGGCGTTAACGTAGTAAAG+AGG | + | chr1.3:78441594-78441613 | None:intergenic | 50.0% |
| ! | TACCAAGTGGGGTGGACTTA+AGG | - | chr1.3:78447628-78447647 | MS.gene037408:CDS | 50.0% |
| ! | TGAGTCTTGTCACTCGGAAC+AGG | + | chr1.3:78443708-78443727 | None:intergenic | 50.0% |
| ! | TGCTGCTTCAAATTGGTCCC+TGG | + | chr1.3:78447521-78447540 | None:intergenic | 50.0% |
| ! | TTCCCGAGCATCCGTTGATT+GGG | - | chr1.3:78443677-78443696 | MS.gene037408:intron | 50.0% |
| ! | TTGCAGAACAGAGCTGGTCT+TGG | + | chr1.3:78441525-78441544 | None:intergenic | 50.0% |
| !! | AGAGCTGGTCTTGGAGAAGA+AGG | + | chr1.3:78441516-78441535 | None:intergenic | 50.0% |
| !! | ATTACCGGCACCGATGAACA+TGG | - | chr1.3:78441800-78441819 | MS.gene037408:intron | 50.0% |
| !! | CGACCTTAAGGAGTGCTAAC+TGG | + | chr1.3:78443182-78443201 | None:intergenic | 50.0% |
| !! | GAGCTGGTCTTGGAGAAGAA+GGG | + | chr1.3:78441515-78441534 | None:intergenic | 50.0% |
| !! | GGCCGTATACCATTTTGGGA+AGG | + | chr1.3:78444666-78444685 | None:intergenic | 50.0% |
| !! | TGTGAGGCTGTTCTGGAGAT+TGG | - | chr1.3:78446917-78446936 | MS.gene037408:intron | 50.0% |
| ACCCTTAAGTCCACCCCACT+TGG | + | chr1.3:78447633-78447652 | None:intergenic | 55.0% | |
| ATATGGATGAGCGTGCCCCT+TGG | - | chr1.3:78446957-78446976 | MS.gene037408:intron | 55.0% | |
| ATTGCAATGGTCCGTAGGGG+TGG | + | chr1.3:78441861-78441880 | None:intergenic | 55.0% | |
| ATTTCCTTCTGCAGCCACCG+TGG | + | chr1.3:78446326-78446345 | None:intergenic | 55.0% | |
| CAAGGACAATGTAGCGAGGC+TGG | - | chr1.3:78446351-78446370 | MS.gene037408:CDS | 55.0% | |
| CAGCCTCACAAGCTGATGTC+AGG | + | chr1.3:78446907-78446926 | None:intergenic | 55.0% | |
| CCTCAGGCCACTATTGATCC+AGG | + | chr1.3:78443646-78443665 | None:intergenic | 55.0% | |
| CCTGGATCAATAGTGGCCTG+AGG | - | chr1.3:78443643-78443662 | MS.gene037408:intron | 55.0% | |
| CGGCCATGGATTCTTGACGA+AGG | - | chr1.3:78444681-78444700 | MS.gene037408:intron | 55.0% | |
| CGTTAACGCCCCTCCTCATA+TGG | - | chr1.3:78441602-78441621 | MS.gene037408:intron | 55.0% | |
| CTCACCATGTTCATCGGTGC+CGG | + | chr1.3:78441807-78441826 | None:intergenic | 55.0% | |
| CTCCCTGACATCAGCTTGTG+AGG | - | chr1.3:78446901-78446920 | MS.gene037408:intron | 55.0% | |
| CTGAAAGCGAGCAATGGCGT+CGG | + | chr1.3:78441652-78441671 | None:intergenic | 55.0% | |
| CTGCCAATCAACACTGGCAG+TGG | - | chr1.3:78446297-78446316 | MS.gene037408:CDS | 55.0% | |
| GGGAGCTGCCTGTAACACAA+AGG | - | chr1.3:78446823-78446842 | MS.gene037408:CDS | 55.0% | |
| TGCCCCAATCAACGGATGCT+CGG | + | chr1.3:78443683-78443702 | None:intergenic | 55.0% | |
| ! | AAGCGCTGCCCATATGAGGA+GGG | + | chr1.3:78441614-78441633 | None:intergenic | 55.0% |
| ! | AAGTGGGGTGGACTTAAGGG+TGG | - | chr1.3:78447632-78447651 | MS.gene037408:CDS | 55.0% |
| ! | AGGGGCACGCTCATCCATAT+AGG | + | chr1.3:78446957-78446976 | None:intergenic | 55.0% |
| ! | GAGTAAGCGCTGCCCATATG+AGG | + | chr1.3:78441618-78441637 | None:intergenic | 55.0% |
| ! | GGCACCTAGCATTGAGCACA+CGG | - | chr1.3:78445475-78445494 | MS.gene037408:CDS | 55.0% |
| ! | TAAGCGCTGCCCATATGAGG+AGG | + | chr1.3:78441615-78441634 | None:intergenic | 55.0% |
| ! | TCCCGAGCATCCGTTGATTG+GGG | - | chr1.3:78443678-78443697 | MS.gene037408:intron | 55.0% |
| ! | TTGGGGAAGCATGCATGGGT+GGG | + | chr1.3:78443468-78443487 | None:intergenic | 55.0% |
| ! | TTTGGGGAAGCATGCATGGG+TGG | + | chr1.3:78443469-78443488 | None:intergenic | 55.0% |
| !! | TGCTTCTGAAGCAGCTGCCA+AGG | - | chr1.3:78447003-78447022 | MS.gene037408:intron | 55.0% |
| ACTTAAGGGTGGCCAGGCCA+TGG | - | chr1.3:78447643-78447662 | MS.gene037408:CDS | 60.0% | |
| AGCGCTGCCCATATGAGGAG+GGG | + | chr1.3:78441613-78441632 | None:intergenic | 60.0% | |
| AGGGGTGGAACCTTGAGCCA+CGG | + | chr1.3:78441846-78441865 | None:intergenic | 60.0% | |
| CGACGCCATTGCTCGCTTTC+AGG | - | chr1.3:78441650-78441669 | MS.gene037408:intron | 60.0% | |
| GATTCCACGGTGGCTGCAGA+AGG | - | chr1.3:78446319-78446338 | MS.gene037408:CDS | 60.0% | |
| GCCCCAATCAACGGATGCTC+GGG | + | chr1.3:78443682-78443701 | None:intergenic | 60.0% | |
| GGCTCAAGGTTCCACCCCTA+CGG | - | chr1.3:78441847-78441866 | MS.gene037408:intron | 60.0% | |
| GTTGAGGTTGAGCCATGGCC+TGG | + | chr1.3:78447658-78447677 | None:intergenic | 60.0% | |
| ! | AAAGCGAGCAATGGCGTCGG+CGG | + | chr1.3:78441649-78441668 | None:intergenic | 60.0% |
| ! | ACTGGCAGTGGATTCCACGG+TGG | - | chr1.3:78446309-78446328 | MS.gene037408:CDS | 60.0% |
| ! | TGGGGAAGCATGCATGGGTG+GGG | + | chr1.3:78443467-78443486 | None:intergenic | 60.0% |
| GCAACTGCTGCCGTGGCTCA+AGG | - | chr1.3:78441833-78441852 | MS.gene037408:intron | 65.0% | |
| ! | GGGTGGACTTAAGGGTGGCC+AGG | - | chr1.3:78447637-78447656 | MS.gene037408:CDS | 65.0% |
| !! | AATGGCGTCGGCGGCGATGG+TGG | + | chr1.3:78441640-78441659 | None:intergenic | 70.0% |
| !! | AGCAATGGCGTCGGCGGCGA+TGG | + | chr1.3:78441643-78441662 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 78441411 | 78447796 | 78441411 | ID=MS.gene037408 |
| chr1.3 | mRNA | 78441411 | 78447796 | 78441411 | ID=MS.gene037408.t1;Parent=MS.gene037408 |
| chr1.3 | exon | 78447536 | 78447796 | 78447536 | ID=MS.gene037408.t1.exon1;Parent=MS.gene037408.t1 |
| chr1.3 | CDS | 78447536 | 78447796 | 78447536 | ID=cds.MS.gene037408.t1;Parent=MS.gene037408.t1 |
| chr1.3 | exon | 78447291 | 78447434 | 78447291 | ID=MS.gene037408.t1.exon2;Parent=MS.gene037408.t1 |
| chr1.3 | CDS | 78447291 | 78447434 | 78447291 | ID=cds.MS.gene037408.t1;Parent=MS.gene037408.t1 |
| chr1.3 | exon | 78446716 | 78446865 | 78446716 | ID=MS.gene037408.t1.exon3;Parent=MS.gene037408.t1 |
| chr1.3 | CDS | 78446716 | 78446865 | 78446716 | ID=cds.MS.gene037408.t1;Parent=MS.gene037408.t1 |
| chr1.3 | exon | 78446285 | 78446452 | 78446285 | ID=MS.gene037408.t1.exon4;Parent=MS.gene037408.t1 |
| chr1.3 | CDS | 78446285 | 78446452 | 78446285 | ID=cds.MS.gene037408.t1;Parent=MS.gene037408.t1 |
| chr1.3 | exon | 78445447 | 78445571 | 78445447 | ID=MS.gene037408.t1.exon5;Parent=MS.gene037408.t1 |
| chr1.3 | CDS | 78445447 | 78445571 | 78445447 | ID=cds.MS.gene037408.t1;Parent=MS.gene037408.t1 |
| chr1.3 | exon | 78445064 | 78445157 | 78445064 | ID=MS.gene037408.t1.exon6;Parent=MS.gene037408.t1 |
| chr1.3 | CDS | 78445064 | 78445157 | 78445064 | ID=cds.MS.gene037408.t1;Parent=MS.gene037408.t1 |
| chr1.3 | exon | 78444505 | 78444603 | 78444505 | ID=MS.gene037408.t1.exon7;Parent=MS.gene037408.t1 |
| chr1.3 | CDS | 78444505 | 78444603 | 78444505 | ID=cds.MS.gene037408.t1;Parent=MS.gene037408.t1 |
| chr1.3 | exon | 78443098 | 78443278 | 78443098 | ID=MS.gene037408.t1.exon8;Parent=MS.gene037408.t1 |
| chr1.3 | CDS | 78443098 | 78443278 | 78443098 | ID=cds.MS.gene037408.t1;Parent=MS.gene037408.t1 |
| chr1.3 | exon | 78442835 | 78442950 | 78442835 | ID=MS.gene037408.t1.exon9;Parent=MS.gene037408.t1 |
| chr1.3 | CDS | 78442835 | 78442950 | 78442835 | ID=cds.MS.gene037408.t1;Parent=MS.gene037408.t1 |
| chr1.3 | exon | 78442183 | 78442338 | 78442183 | ID=MS.gene037408.t1.exon10;Parent=MS.gene037408.t1 |
| chr1.3 | CDS | 78442183 | 78442338 | 78442183 | ID=cds.MS.gene037408.t1;Parent=MS.gene037408.t1 |
| chr1.3 | exon | 78441661 | 78441789 | 78441661 | ID=MS.gene037408.t1.exon11;Parent=MS.gene037408.t1 |
| chr1.3 | CDS | 78441661 | 78441789 | 78441661 | ID=cds.MS.gene037408.t1;Parent=MS.gene037408.t1 |
| chr1.3 | exon | 78441411 | 78441584 | 78441411 | ID=MS.gene037408.t1.exon12;Parent=MS.gene037408.t1 |
| chr1.3 | CDS | 78441411 | 78441584 | 78441411 | ID=cds.MS.gene037408.t1;Parent=MS.gene037408.t1 |
| Gene Sequence |
| Protein sequence |
