Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037815.t1 | XP_003629175.3 | 87.5 | 535 | 34 | 1 | 62 | 563 | 71 | 605 | 8.10E-273 | 949.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037815.t1 | Q9SEY5 | 62.5 | 550 | 161 | 3 | 59 | 563 | 36 | 585 | 9.9e-195 | 681.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037815.t1 | A0A2Z6NX57 | 82.0 | 532 | 63 | 1 | 71 | 569 | 1 | 532 | 5.5e-255 | 889.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene037815 | MS.gene21937 | PPI |
MS.gene037815 | MS.gene21689 | PPI |
MS.gene037815 | MS.gene05028 | PPI |
MS.gene037815 | MS.gene049681 | PPI |
MS.gene037815 | MS.gene008350 | PPI |
MS.gene037815 | MS.gene26216 | PPI |
MS.gene037815 | MS.gene025344 | PPI |
MS.gene037815 | MS.gene22277 | PPI |
MS.gene037815 | MS.gene21691 | PPI |
MS.gene037815 | MS.gene009614 | PPI |
MS.gene037815 | MS.gene070590 | PPI |
MS.gene037815 | MS.gene041843 | PPI |
MS.gene037815 | MS.gene061174 | PPI |
MS.gene037815 | MS.gene041844 | PPI |
MS.gene037815 | MS.gene99100 | PPI |
MS.gene037815 | MS.gene032916 | PPI |
MS.gene037815 | MS.gene017279 | PPI |
MS.gene037815 | MS.gene55232 | PPI |
MS.gene037815 | MS.gene061578 | PPI |
MS.gene037815 | MS.gene024710 | PPI |
MS.gene061175 | MS.gene037815 | PPI |
MS.gene76590 | MS.gene037815 | PPI |
MS.gene037815 | MS.gene024712 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037815.t1 | MTR_8g074120 | 93.696 | 460 | 29 | 0 | 104 | 563 | 20 | 479 | 0.0 | 915 |
MS.gene037815.t1 | MTR_8g074040 | 79.817 | 545 | 77 | 1 | 52 | 563 | 24 | 568 | 0.0 | 898 |
MS.gene037815.t1 | MTR_8g074040 | 85.556 | 450 | 65 | 0 | 114 | 563 | 1 | 450 | 0.0 | 814 |
MS.gene037815.t1 | MTR_5g008800 | 59.168 | 529 | 181 | 2 | 71 | 566 | 1 | 527 | 0.0 | 668 |
MS.gene037815.t1 | MTR_5g008820 | 56.522 | 529 | 193 | 3 | 71 | 566 | 1 | 525 | 0.0 | 649 |
MS.gene037815.t1 | MTR_4g121600 | 47.619 | 546 | 234 | 6 | 66 | 563 | 2 | 543 | 0.0 | 527 |
MS.gene037815.t1 | MTR_2g044180 | 47.611 | 565 | 235 | 7 | 79 | 599 | 15 | 562 | 0.0 | 527 |
MS.gene037815.t1 | MTR_3g064420 | 46.111 | 540 | 242 | 5 | 71 | 563 | 1 | 538 | 1.27e-173 | 507 |
MS.gene037815.t1 | MTR_5g076240 | 47.015 | 536 | 237 | 7 | 71 | 563 | 1 | 532 | 1.04e-170 | 499 |
MS.gene037815.t1 | MTR_2g044180 | 49.590 | 488 | 218 | 6 | 123 | 599 | 1 | 471 | 4.99e-168 | 489 |
MS.gene037815.t1 | MTR_5g076220 | 46.927 | 537 | 237 | 8 | 71 | 563 | 1 | 533 | 2.98e-161 | 474 |
MS.gene037815.t1 | MTR_5g076200 | 47.037 | 540 | 232 | 9 | 71 | 563 | 1 | 533 | 4.12e-161 | 474 |
MS.gene037815.t1 | MTR_0161s0050 | 47.222 | 540 | 233 | 9 | 71 | 563 | 1 | 535 | 2.52e-159 | 470 |
MS.gene037815.t1 | MTR_5g023730 | 44.465 | 533 | 248 | 9 | 72 | 563 | 3 | 528 | 4.74e-145 | 432 |
MS.gene037815.t1 | MTR_0803s0020 | 31.838 | 468 | 296 | 7 | 95 | 559 | 279 | 726 | 8.32e-56 | 205 |
MS.gene037815.t1 | MTR_1g026310 | 26.819 | 481 | 314 | 13 | 94 | 560 | 85 | 541 | 3.25e-41 | 158 |
MS.gene037815.t1 | MTR_8g039720 | 28.151 | 476 | 287 | 15 | 94 | 544 | 82 | 527 | 4.67e-41 | 157 |
MS.gene037815.t1 | MTR_1569s0010 | 32.941 | 340 | 217 | 7 | 227 | 563 | 188 | 519 | 1.63e-39 | 152 |
MS.gene037815.t1 | MTR_2g095510 | 26.016 | 492 | 300 | 15 | 95 | 563 | 73 | 523 | 4.65e-36 | 143 |
MS.gene037815.t1 | MTR_2g105570 | 27.122 | 483 | 317 | 14 | 95 | 563 | 72 | 533 | 7.20e-36 | 142 |
MS.gene037815.t1 | MTR_3g460770 | 24.435 | 487 | 321 | 16 | 96 | 567 | 75 | 529 | 3.39e-34 | 137 |
MS.gene037815.t1 | MTR_4g077900 | 25.506 | 494 | 305 | 15 | 95 | 563 | 7 | 462 | 4.72e-34 | 136 |
MS.gene037815.t1 | MTR_3g035130 | 26.337 | 505 | 320 | 15 | 74 | 563 | 32 | 499 | 2.39e-33 | 134 |
MS.gene037815.t1 | MTR_3g088870 | 28.571 | 364 | 229 | 11 | 214 | 561 | 192 | 540 | 2.54e-33 | 135 |
MS.gene037815.t1 | MTR_3g088880 | 25.667 | 487 | 309 | 14 | 88 | 561 | 92 | 538 | 2.71e-33 | 135 |
MS.gene037815.t1 | MTR_5g027500 | 27.767 | 497 | 300 | 16 | 95 | 563 | 87 | 552 | 4.69e-33 | 134 |
MS.gene037815.t1 | MTR_1g090737 | 25.523 | 478 | 314 | 13 | 96 | 562 | 103 | 549 | 5.13e-32 | 131 |
MS.gene037815.t1 | MTR_1g073180 | 27.016 | 496 | 308 | 12 | 84 | 563 | 61 | 518 | 5.28e-32 | 131 |
MS.gene037815.t1 | MTR_1g063110 | 28.024 | 496 | 291 | 18 | 96 | 563 | 75 | 532 | 6.33e-31 | 128 |
MS.gene037815.t1 | MTR_4g057730 | 24.131 | 489 | 314 | 13 | 96 | 563 | 74 | 526 | 1.29e-30 | 127 |
MS.gene037815.t1 | MTR_4g005750 | 25.466 | 483 | 319 | 14 | 95 | 563 | 71 | 526 | 3.97e-30 | 125 |
MS.gene037815.t1 | MTR_1g073180 | 26.899 | 487 | 303 | 11 | 84 | 555 | 83 | 531 | 5.07e-30 | 125 |
MS.gene037815.t1 | MTR_1g063120 | 26.316 | 494 | 304 | 15 | 97 | 563 | 76 | 536 | 6.99e-30 | 125 |
MS.gene037815.t1 | MTR_5g007640 | 26.626 | 492 | 301 | 17 | 94 | 561 | 114 | 569 | 7.37e-28 | 119 |
MS.gene037815.t1 | MTR_3g035130 | 26.237 | 465 | 294 | 12 | 74 | 525 | 32 | 460 | 2.69e-27 | 116 |
MS.gene037815.t1 | MTR_5g027480 | 28.219 | 365 | 217 | 14 | 221 | 563 | 198 | 539 | 6.30e-27 | 115 |
MS.gene037815.t1 | MTR_1586s0010 | 26.479 | 355 | 228 | 10 | 96 | 436 | 89 | 424 | 3.90e-26 | 112 |
MS.gene037815.t1 | MTR_4g128337 | 24.593 | 492 | 310 | 16 | 96 | 563 | 78 | 532 | 4.00e-25 | 110 |
MS.gene037815.t1 | MTR_2g030240 | 23.234 | 538 | 336 | 14 | 95 | 589 | 46 | 549 | 2.56e-24 | 107 |
MS.gene037815.t1 | MTR_7g109830 | 25.265 | 471 | 272 | 18 | 97 | 507 | 97 | 547 | 1.32e-23 | 106 |
MS.gene037815.t1 | MTR_2g095510 | 25.971 | 412 | 242 | 14 | 95 | 484 | 73 | 443 | 1.34e-23 | 104 |
MS.gene037815.t1 | MTR_4g057730 | 23.434 | 431 | 280 | 11 | 95 | 508 | 73 | 470 | 1.35e-23 | 105 |
MS.gene037815.t1 | MTR_1g034360 | 24.622 | 463 | 274 | 15 | 97 | 502 | 99 | 543 | 1.14e-22 | 103 |
MS.gene037815.t1 | MTR_2g030240 | 24.057 | 424 | 266 | 11 | 209 | 589 | 45 | 455 | 4.79e-22 | 100 |
MS.gene037815.t1 | MTR_1054s0020 | 25.519 | 482 | 293 | 16 | 95 | 557 | 315 | 749 | 2.70e-21 | 99.4 |
MS.gene037815.t1 | MTR_4g011790 | 26.053 | 380 | 234 | 11 | 207 | 554 | 209 | 573 | 1.99e-20 | 95.9 |
MS.gene037815.t1 | MTR_4g011790 | 26.053 | 380 | 234 | 11 | 207 | 554 | 209 | 573 | 2.02e-20 | 96.3 |
MS.gene037815.t1 | MTR_4g011790 | 25.707 | 389 | 233 | 12 | 207 | 554 | 209 | 582 | 7.75e-19 | 90.9 |
MS.gene037815.t1 | MTR_4g068670 | 23.769 | 467 | 272 | 14 | 97 | 502 | 98 | 541 | 8.72e-19 | 90.9 |
MS.gene037815.t1 | MTR_1g086600 | 24.043 | 470 | 271 | 16 | 97 | 502 | 119 | 566 | 4.06e-18 | 89.0 |
MS.gene037815.t1 | MTR_4g057730 | 22.222 | 414 | 272 | 11 | 95 | 491 | 73 | 453 | 4.37e-18 | 87.8 |
MS.gene037815.t1 | MTR_5g009360 | 27.297 | 370 | 179 | 16 | 198 | 502 | 74 | 418 | 1.22e-17 | 87.0 |
MS.gene037815.t1 | MTR_5g009350 | 26.735 | 389 | 194 | 17 | 198 | 521 | 200 | 562 | 1.61e-17 | 86.7 |
MS.gene037815.t1 | MTR_5g009360 | 26.486 | 370 | 182 | 15 | 198 | 502 | 200 | 544 | 1.72e-17 | 87.0 |
MS.gene037815.t1 | MTR_5g009350 | 27.249 | 378 | 185 | 16 | 198 | 510 | 200 | 552 | 1.82e-17 | 86.7 |
MS.gene037815.t1 | MTR_8g099420 | 23.517 | 489 | 274 | 18 | 97 | 515 | 100 | 558 | 2.62e-17 | 86.3 |
MS.gene037815.t1 | MTR_4g013210 | 25.594 | 379 | 234 | 13 | 217 | 562 | 66 | 429 | 5.23e-17 | 84.3 |
MS.gene037815.t1 | MTR_5g009350 | 27.027 | 370 | 180 | 16 | 198 | 502 | 200 | 544 | 5.24e-17 | 85.5 |
MS.gene037815.t1 | MTR_5g009350 | 27.027 | 370 | 180 | 16 | 198 | 502 | 200 | 544 | 5.35e-17 | 85.5 |
MS.gene037815.t1 | MTR_1g030290 | 26.884 | 398 | 204 | 16 | 183 | 511 | 213 | 592 | 1.60e-15 | 80.9 |
MS.gene037815.t1 | MTR_7g084850 | 25.648 | 386 | 217 | 15 | 221 | 567 | 358 | 712 | 6.12e-15 | 79.0 |
MS.gene037815.t1 | MTR_4g013210 | 24.176 | 364 | 217 | 15 | 217 | 562 | 66 | 388 | 8.03e-15 | 77.4 |
MS.gene037815.t1 | MTR_4g013210 | 25.815 | 368 | 206 | 15 | 217 | 562 | 218 | 540 | 1.17e-14 | 77.8 |
MS.gene037815.t1 | MTR_3g087980 | 28.367 | 349 | 168 | 14 | 221 | 502 | 248 | 581 | 3.53e-14 | 76.3 |
MS.gene037815.t1 | MTR_1g026430 | 24.573 | 293 | 197 | 8 | 94 | 374 | 85 | 365 | 2.44e-12 | 69.7 |
MS.gene037815.t1 | MTR_8g083170 | 28.837 | 215 | 117 | 8 | 340 | 542 | 457 | 647 | 3.80e-12 | 70.1 |
MS.gene037815.t1 | MTR_1g026470 | 24.232 | 293 | 198 | 7 | 94 | 374 | 85 | 365 | 1.25e-11 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037815.t1 | AT2G17650 | 64.182 | 550 | 152 | 4 | 59 | 563 | 36 | 585 | 0.0 | 711 |
MS.gene037815.t1 | AT1G20560 | 57.576 | 528 | 189 | 2 | 71 | 563 | 3 | 530 | 0.0 | 642 |
MS.gene037815.t1 | AT1G20560 | 61.062 | 452 | 174 | 1 | 114 | 563 | 1 | 452 | 0.0 | 601 |
MS.gene037815.t1 | AT5G16340 | 49.064 | 534 | 226 | 6 | 71 | 563 | 1 | 529 | 1.32e-175 | 511 |
MS.gene037815.t1 | AT5G16370 | 49.257 | 538 | 227 | 6 | 71 | 567 | 1 | 533 | 2.42e-175 | 510 |
MS.gene037815.t1 | AT3G16910 | 47.135 | 541 | 241 | 6 | 68 | 563 | 6 | 546 | 3.92e-175 | 510 |
MS.gene037815.t1 | AT1G66120 | 45.693 | 534 | 246 | 6 | 71 | 562 | 1 | 532 | 6.44e-168 | 492 |
MS.gene037815.t1 | AT1G76290 | 47.637 | 529 | 234 | 5 | 71 | 563 | 1 | 522 | 7.41e-166 | 486 |
MS.gene037815.t1 | AT1G75960 | 47.004 | 534 | 237 | 6 | 71 | 563 | 1 | 529 | 3.05e-164 | 482 |
MS.gene037815.t1 | AT1G65890 | 43.493 | 584 | 261 | 10 | 71 | 591 | 1 | 578 | 8.30e-163 | 479 |
MS.gene037815.t1 | AT1G21530 | 45.269 | 539 | 243 | 7 | 71 | 563 | 1 | 533 | 9.69e-161 | 473 |
MS.gene037815.t1 | AT1G21540 | 46.111 | 540 | 238 | 8 | 71 | 563 | 1 | 534 | 2.33e-160 | 472 |
MS.gene037815.t1 | AT1G65880 | 42.539 | 583 | 270 | 9 | 71 | 591 | 1 | 580 | 2.73e-159 | 470 |
MS.gene037815.t1 | AT1G21530 | 45.083 | 539 | 242 | 7 | 71 | 563 | 1 | 531 | 4.29e-159 | 469 |
MS.gene037815.t1 | AT1G77240 | 45.131 | 534 | 247 | 8 | 71 | 563 | 1 | 529 | 4.48e-156 | 461 |
MS.gene037815.t1 | AT1G68270 | 40.681 | 558 | 248 | 10 | 71 | 576 | 1 | 527 | 7.98e-135 | 406 |
MS.gene037815.t1 | AT1G20500 | 26.857 | 525 | 321 | 15 | 57 | 567 | 63 | 538 | 9.48e-43 | 162 |
MS.gene037815.t1 | AT5G63380 | 32.000 | 350 | 213 | 9 | 221 | 560 | 205 | 539 | 5.20e-39 | 152 |
MS.gene037815.t1 | AT4G05160 | 27.959 | 490 | 296 | 16 | 95 | 562 | 73 | 527 | 6.68e-37 | 145 |
MS.gene037815.t1 | AT1G20510 | 27.853 | 517 | 294 | 19 | 68 | 560 | 64 | 525 | 6.84e-37 | 145 |
MS.gene037815.t1 | AT1G20480 | 26.273 | 491 | 314 | 14 | 90 | 560 | 84 | 546 | 2.67e-34 | 138 |
MS.gene037815.t1 | AT3G48990 | 27.291 | 491 | 312 | 16 | 88 | 563 | 38 | 498 | 3.66e-32 | 131 |
MS.gene037815.t1 | AT4G19010 | 24.082 | 490 | 314 | 15 | 96 | 563 | 93 | 546 | 4.87e-32 | 131 |
MS.gene037815.t1 | AT1G62940 | 25.000 | 484 | 323 | 15 | 96 | 567 | 73 | 528 | 1.90e-31 | 129 |
MS.gene037815.t1 | AT3G21240 | 25.941 | 478 | 322 | 11 | 96 | 563 | 83 | 538 | 2.21e-31 | 129 |
MS.gene037815.t1 | AT5G38120 | 26.069 | 491 | 307 | 16 | 96 | 567 | 85 | 538 | 2.02e-30 | 126 |
MS.gene037815.t1 | AT3G21230 | 26.305 | 479 | 319 | 11 | 95 | 560 | 92 | 549 | 1.52e-29 | 124 |
MS.gene037815.t1 | AT1G20510 | 27.802 | 464 | 257 | 18 | 68 | 508 | 64 | 472 | 1.69e-29 | 122 |
MS.gene037815.t1 | AT5G38120 | 25.696 | 467 | 292 | 15 | 96 | 544 | 85 | 514 | 3.62e-27 | 116 |
MS.gene037815.t1 | AT3G21230 | 25.758 | 462 | 310 | 10 | 95 | 544 | 92 | 532 | 2.12e-26 | 114 |
MS.gene037815.t1 | AT3G21240 | 26.241 | 423 | 281 | 10 | 96 | 509 | 83 | 483 | 3.05e-26 | 113 |
MS.gene037815.t1 | AT3G21240 | 26.241 | 423 | 281 | 10 | 96 | 509 | 83 | 483 | 3.05e-26 | 113 |
MS.gene037815.t1 | AT2G47240 | 26.019 | 515 | 285 | 19 | 92 | 527 | 94 | 591 | 1.10e-24 | 109 |
MS.gene037815.t1 | AT2G47240 | 26.019 | 515 | 285 | 19 | 92 | 527 | 94 | 591 | 1.10e-24 | 109 |
MS.gene037815.t1 | AT2G47240 | 26.019 | 515 | 285 | 19 | 92 | 527 | 94 | 591 | 1.10e-24 | 109 |
MS.gene037815.t1 | AT1G51680 | 24.280 | 486 | 327 | 12 | 95 | 563 | 84 | 545 | 1.20e-24 | 108 |
MS.gene037815.t1 | AT2G47240 | 26.019 | 515 | 285 | 19 | 92 | 527 | 35 | 532 | 1.26e-24 | 109 |
MS.gene037815.t1 | AT1G65060 | 23.493 | 481 | 330 | 11 | 95 | 563 | 94 | 548 | 1.33e-24 | 108 |
MS.gene037815.t1 | AT1G30520 | 23.892 | 519 | 296 | 15 | 95 | 560 | 51 | 523 | 1.80e-24 | 108 |
MS.gene037815.t1 | AT1G30520 | 23.892 | 519 | 296 | 15 | 95 | 560 | 51 | 523 | 1.80e-24 | 108 |
MS.gene037815.t1 | AT1G51680 | 24.411 | 467 | 311 | 12 | 95 | 544 | 84 | 525 | 1.19e-23 | 105 |
MS.gene037815.t1 | AT1G20510 | 27.314 | 443 | 244 | 18 | 68 | 487 | 64 | 451 | 2.32e-23 | 104 |
MS.gene037815.t1 | AT3G21230 | 26.698 | 427 | 280 | 10 | 95 | 509 | 92 | 497 | 5.07e-23 | 103 |
MS.gene037815.t1 | AT5G38120 | 25.754 | 431 | 265 | 15 | 96 | 508 | 85 | 478 | 4.00e-22 | 100 |
MS.gene037815.t1 | AT5G38120 | 25.754 | 431 | 265 | 15 | 96 | 508 | 85 | 478 | 4.00e-22 | 100 |
MS.gene037815.t1 | AT1G64400 | 23.909 | 481 | 269 | 16 | 96 | 508 | 99 | 550 | 8.71e-21 | 97.4 |
MS.gene037815.t1 | AT1G51680 | 25.058 | 431 | 283 | 11 | 95 | 509 | 84 | 490 | 1.55e-20 | 95.9 |
MS.gene037815.t1 | AT3G16170 | 26.178 | 382 | 217 | 15 | 221 | 562 | 235 | 591 | 1.24e-17 | 87.4 |
MS.gene037815.t1 | AT1G49430 | 21.803 | 477 | 282 | 14 | 97 | 507 | 100 | 551 | 4.84e-17 | 85.5 |
MS.gene037815.t1 | AT4G11030 | 24.490 | 490 | 253 | 18 | 97 | 508 | 100 | 550 | 6.69e-17 | 85.1 |
MS.gene037815.t1 | AT1G20490 | 26.525 | 377 | 231 | 14 | 95 | 456 | 83 | 428 | 1.49e-16 | 83.2 |
MS.gene037815.t1 | AT1G20490 | 26.525 | 377 | 231 | 14 | 95 | 456 | 83 | 428 | 1.49e-16 | 83.2 |
MS.gene037815.t1 | AT4G23850 | 24.719 | 445 | 244 | 17 | 124 | 502 | 126 | 545 | 1.56e-16 | 84.0 |
MS.gene037815.t1 | AT1G30520 | 23.529 | 459 | 253 | 15 | 95 | 504 | 51 | 460 | 5.10e-16 | 81.6 |
MS.gene037815.t1 | AT1G30520 | 23.529 | 459 | 253 | 15 | 95 | 504 | 51 | 460 | 5.10e-16 | 81.6 |
MS.gene037815.t1 | AT1G77590 | 25.255 | 392 | 207 | 15 | 180 | 502 | 59 | 433 | 3.09e-15 | 79.3 |
MS.gene037815.t1 | AT1G77590 | 25.255 | 392 | 207 | 15 | 180 | 502 | 205 | 579 | 4.37e-15 | 79.3 |
Find 156 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCTCTTTCCTGTTTATCTT+TGG | 0.196891 | 8.2:-30598998 | MS.gene037815:CDS |
TGTTAAAGATTCTGCTACTA+TGG | 0.215289 | 8.2:-30598547 | MS.gene037815:CDS |
TTTGTCACCTATAAACTTCT+TGG | 0.222421 | 8.2:-30601024 | MS.gene037815:CDS |
TTCACGCCTTGATGCAAATA+TGG | 0.236806 | 8.2:-30599378 | MS.gene037815:CDS |
ATCTTACCTGTTGAAGTCTT+TGG | 0.241357 | 8.2:+30598099 | None:intergenic |
TTGAAGGATATAATAATATA+TGG | 0.268317 | 8.2:-30598348 | MS.gene037815:CDS |
CTTTCGATGATGGAAGAAAA+TGG | 0.270591 | 8.2:-30598723 | MS.gene037815:CDS |
GACTTTCCTTAGACAAATAT+TGG | 0.272166 | 8.2:+30598911 | None:intergenic |
ATATTGTCAAATATGTTCTT+TGG | 0.291239 | 8.2:+30598885 | None:intergenic |
TTGGAACCAATATTTGTCTA+AGG | 0.292344 | 8.2:-30598917 | MS.gene037815:CDS |
TCAATGATCATGACTAAAAT+AGG | 0.293022 | 8.2:+30599245 | None:intergenic |
GCTCTCTCCAAGAAGTTTAT+AGG | 0.294201 | 8.2:+30601017 | None:intergenic |
AATATCTCGAAGTTAACTTT+TGG | 0.302684 | 8.2:+30597023 | None:intergenic |
TTTCTTCCTCCGCCGTTGTA+AGG | 0.303047 | 8.2:+30602939 | None:intergenic |
GTTCCATTGTTTCATGCTAA+TGG | 0.313041 | 8.2:-30598972 | MS.gene037815:CDS |
CTTCTCTCTGCACCTTATTC+CGG | 0.326964 | 8.2:+30597114 | None:intergenic |
TGCCCGGCCGGATGATCATT+GGG | 0.342377 | 8.2:-30598250 | MS.gene037815:CDS |
GAGGTGTAATTTATACTTAT+AGG | 0.342668 | 8.2:+30599110 | None:intergenic |
TTTAATATTACTCATATGTA+TGG | 0.350433 | 8.2:-30598699 | MS.gene037815:CDS |
CGTCGAGAGGATAAAGAAAA+TGG | 0.357348 | 8.2:-30602859 | MS.gene037815:intron |
TAATGGTTGGTGCTTAGCTT+GGG | 0.361141 | 8.2:-30598955 | MS.gene037815:CDS |
TCATACATTGCAGGGACATT+AGG | 0.376737 | 8.2:+30599449 | None:intergenic |
TTGCCCGGCCGGATGATCAT+TGG | 0.377948 | 8.2:-30598251 | MS.gene037815:CDS |
GAAGGAGGAAGACCGGAATA+AGG | 0.380619 | 8.2:-30597126 | MS.gene037815:CDS |
AGGGATTTCTCGTGGAGATA+TGG | 0.387671 | 8.2:-30600886 | MS.gene037815:intron |
GGAACATTCCAAAGATAAAC+AGG | 0.397537 | 8.2:+30598990 | None:intergenic |
ACCGTCTTTGAAAGCTTCTT+CGG | 0.397570 | 8.2:+30598434 | None:intergenic |
AGGACGTTGTTCCAGGATCA+TGG | 0.404111 | 8.2:-30601091 | MS.gene037815:CDS |
TGGGGAGTGGCAGCACAGTT+TGG | 0.407012 | 8.2:-30598936 | MS.gene037815:CDS |
TTGCTTGTGAATGCTCCAAT+AGG | 0.413914 | 8.2:+30599348 | None:intergenic |
CTGGCGGACTGATCGGGTCC+CGG | 0.425235 | 8.2:-30597618 | MS.gene037815:CDS |
TCCATTGATTCCCATGATCC+TGG | 0.425895 | 8.2:+30601080 | None:intergenic |
TCCAAAGATAAACAGGAAAG+AGG | 0.427884 | 8.2:+30598997 | None:intergenic |
AATCAACTGGCGGACTGATC+GGG | 0.429936 | 8.2:-30597624 | MS.gene037815:CDS |
AAATATGGTTTCAGTCCTAT+TGG | 0.431796 | 8.2:-30599363 | MS.gene037815:CDS |
CTAATGGTTGGTGCTTAGCT+TGG | 0.438996 | 8.2:-30598956 | MS.gene037815:CDS |
TTCTTCCTCCGCCGTTGTAA+GGG | 0.440098 | 8.2:+30602940 | None:intergenic |
TGACTGAAGACAACTCCTTT+AGG | 0.442881 | 8.2:+30599071 | None:intergenic |
TACAACGGCGGAGGAAGAAA+AGG | 0.443849 | 8.2:-30602936 | MS.gene037815:CDS |
TGGCGGACTGATCGGGTCCC+GGG | 0.447386 | 8.2:-30597617 | MS.gene037815:CDS |
TGATGGATACATTGAAGTTA+AGG | 0.448458 | 8.2:-30598376 | MS.gene037815:CDS |
TGAAGGATATAATAATATAT+GGG | 0.448831 | 8.2:-30598347 | MS.gene037815:CDS |
GATATGCCAAAGACTTCAAC+AGG | 0.449799 | 8.2:-30598105 | MS.gene037815:intron |
ACACCTCTGGCACTACATCT+AGG | 0.454516 | 8.2:-30599094 | MS.gene037815:CDS |
ACCGGACCGGTCTGTTCACC+CGG | 0.455565 | 8.2:+30597599 | None:intergenic |
GTTGGCGAGATAATGTTTAG+AGG | 0.461622 | 8.2:-30598498 | MS.gene037815:CDS |
AAGACGGTTGGTTTCATAGT+GGG | 0.468317 | 8.2:-30598419 | MS.gene037815:CDS |
CACAAGGTATCAGTGATAAC+CGG | 0.474826 | 8.2:-30598771 | MS.gene037815:CDS |
GAATCAACTGGCGGACTGAT+CGG | 0.475316 | 8.2:-30597625 | MS.gene037815:CDS |
AAATGCAGCTCATACATTGC+AGG | 0.475944 | 8.2:+30599440 | None:intergenic |
TTGAGGCCGCAGTAGTTGCC+CGG | 0.477402 | 8.2:-30598266 | MS.gene037815:CDS |
CCGACCATGGTTGAATCAAC+TGG | 0.478881 | 8.2:-30597637 | MS.gene037815:CDS |
CAAAGCGACTCGTAAATTCA+TGG | 0.483322 | 8.2:+30597185 | None:intergenic |
GCCACAGATCCTTTCGATGA+TGG | 0.483462 | 8.2:-30598733 | MS.gene037815:CDS |
CGAAGTTGCTCGAGGAGCAT+TGG | 0.487528 | 8.2:-30599297 | MS.gene037815:CDS |
TGAAGTTAAGGATAGATTGA+AGG | 0.489316 | 8.2:-30598364 | MS.gene037815:CDS |
GTGATTGAGCAGCTTTCTAT+CGG | 0.490999 | 8.2:+30598791 | None:intergenic |
GGACGGAGAAGGAGGAAGAC+CGG | 0.495846 | 8.2:-30597133 | MS.gene037815:CDS |
CTCACAGAAACATGTGGTGC+AGG | 0.497007 | 8.2:-30598675 | MS.gene037815:CDS |
GAAAGGATCTGTGGCGGTGG+AGG | 0.498372 | 8.2:+30598741 | None:intergenic |
TCCAGGATCATGGGAATCAA+TGG | 0.503093 | 8.2:-30601081 | MS.gene037815:CDS |
AGGCAAACGTTCCCTACAAA+AGG | 0.506433 | 8.2:+30598161 | None:intergenic |
TGTTCCACATGTGGCATTGG+AGG | 0.506794 | 8.2:-30598577 | MS.gene037815:CDS |
CAAAACAAGGAGGACGGAGA+AGG | 0.507221 | 8.2:-30597144 | MS.gene037815:CDS |
GAGTCGCTTTGCCAAAGAGA+TGG | 0.509176 | 8.2:-30597173 | MS.gene037815:CDS |
CGTGAAAATAATTAGACCAA+TGG | 0.512138 | 8.2:-30602890 | MS.gene037815:CDS |
TCTCGACGAGATCTTTCCAT+TGG | 0.514868 | 8.2:+30602874 | None:intergenic |
CAGAGAATGGCTCCAGCCAT+TGG | 0.516988 | 8.2:+30599410 | None:intergenic |
GTTTGACCCCAATGATCATC+CGG | 0.518947 | 8.2:+30598243 | None:intergenic |
GACCCCAATGATCATCCGGC+CGG | 0.519096 | 8.2:+30598247 | None:intergenic |
CATTTCGCAGTACCAATGGC+TGG | 0.521714 | 8.2:-30599422 | MS.gene037815:CDS |
GGCCGCAGTAGTTGCCCGGC+CGG | 0.526648 | 8.2:-30598262 | MS.gene037815:CDS |
GGCACTACATCTAGGCCTAA+AGG | 0.526937 | 8.2:-30599086 | MS.gene037815:CDS |
ATAAGTATAAATTACACCTC+TGG | 0.527089 | 8.2:-30599107 | MS.gene037815:CDS |
AGGTGTTCCACATGTGGCAT+TGG | 0.528910 | 8.2:-30598580 | MS.gene037815:CDS |
CATTGTTTCATGCTAATGGT+TGG | 0.530364 | 8.2:-30598968 | MS.gene037815:CDS |
CTTCTTGGAGAGAGCAGCAA+AGG | 0.533662 | 8.2:-30601009 | MS.gene037815:intron |
AACAAGGAGGACGGAGAAGG+AGG | 0.538866 | 8.2:-30597141 | MS.gene037815:CDS |
ATCGAAAGGATCTGTGGCGG+TGG | 0.540215 | 8.2:+30598738 | None:intergenic |
AAAGACGGTTGGTTTCATAG+TGG | 0.542816 | 8.2:-30598420 | MS.gene037815:CDS |
TAGTCATCCGGCTGTTCTTG+AGG | 0.544770 | 8.2:-30598283 | MS.gene037815:CDS |
GGACGTTGTTCCAGGATCAT+GGG | 0.546909 | 8.2:-30601090 | MS.gene037815:CDS |
TGAATTAAGAGTACAGAGAA+TGG | 0.548168 | 8.2:+30599397 | None:intergenic |
AAGAAGCTTTCAAAGACGGT+TGG | 0.551369 | 8.2:-30598431 | MS.gene037815:CDS |
ACCCCAATGATCATCCGGCC+GGG | 0.552569 | 8.2:+30598248 | None:intergenic |
AGTCGCTTTGCCAAAGAGAT+GGG | 0.553826 | 8.2:-30597172 | MS.gene037815:CDS |
CGGGTCCCGGGTGAACAGAC+CGG | 0.554153 | 8.2:-30597605 | MS.gene037815:intron |
TTGTGCTTGGAGACCTGAGT+GGG | 0.556554 | 8.2:-30598646 | MS.gene037815:CDS |
GGAACGTTTGCCTCACTACA+TGG | 0.557015 | 8.2:-30598151 | MS.gene037815:CDS |
CTGAAACCATATTTGCATCA+AGG | 0.559164 | 8.2:+30599372 | None:intergenic |
ACCGAAGAAGCTTTCAAAGA+CGG | 0.559734 | 8.2:-30598435 | MS.gene037815:CDS |
CTAGCTGTGAAACACGCTGA+TGG | 0.560962 | 8.2:-30598393 | MS.gene037815:CDS |
TTGGTGCTTAGCTTGGGGAG+TGG | 0.567534 | 8.2:-30598949 | MS.gene037815:CDS |
GAAGGATATAATAATATATG+GGG | 0.569956 | 8.2:-30598346 | MS.gene037815:CDS |
AGAAAACATTAGCTCGGTCG+AGG | 0.571304 | 8.2:-30598322 | MS.gene037815:CDS |
TTGGCGAGATAATGTTTAGA+GGG | 0.571382 | 8.2:-30598497 | MS.gene037815:CDS |
CCAGTTGATTCAACCATGGT+CGG | 0.571430 | 8.2:+30597637 | None:intergenic |
ATGGAAAGTGTTCCAGCTGA+CGG | 0.581881 | 8.2:-30598528 | MS.gene037815:CDS |
ACTGCGGCCTCAAGAACAGC+CGG | 0.582629 | 8.2:+30598276 | None:intergenic |
TGGCGGTGGAGGAGAACCTC+CGG | 0.583239 | 8.2:+30598752 | None:intergenic |
AAAGGCCCTTACAACGGCGG+AGG | 0.583417 | 8.2:-30602945 | MS.gene037815:intron |
TAAGCATAAAGTAACATACA+TGG | 0.584854 | 8.2:-30598859 | MS.gene037815:CDS |
CCAAAGATAAACAGGAAAGA+GGG | 0.591892 | 8.2:+30598998 | None:intergenic |
AGACGGTTGGTTTCATAGTG+GGG | 0.597730 | 8.2:-30598418 | MS.gene037815:CDS |
GGATCATGGGAATCAATGGA+AGG | 0.598769 | 8.2:-30601077 | MS.gene037815:CDS |
GCTGCATTTCGCAGTACCAA+TGG | 0.599815 | 8.2:-30599426 | MS.gene037815:CDS |
TCCCAGTTAGGGATTTCTCG+TGG | 0.600719 | 8.2:-30600894 | MS.gene037815:intron |
AAGAAGTTTATAGGTGACAA+AGG | 0.600979 | 8.2:+30601026 | None:intergenic |
ACAACGGCGGAGGAAGAAAA+GGG | 0.602099 | 8.2:-30602935 | MS.gene037815:CDS |
AATGCAGCTCATACATTGCA+GGG | 0.604689 | 8.2:+30599441 | None:intergenic |
GGAGGTAACATGTCCCACTC+AGG | 0.607903 | 8.2:+30598633 | None:intergenic |
TCACAGAAACATGTGGTGCA+GGG | 0.609788 | 8.2:-30598674 | MS.gene037815:CDS |
ACAAAGGAACAGAATTTGCA+TGG | 0.610896 | 8.2:+30601042 | None:intergenic |
ATTTCCTCCAATGCCACATG+TGG | 0.612307 | 8.2:+30598573 | None:intergenic |
GGCCGGAAAGGCCCTTACAA+CGG | 0.612594 | 8.2:-30602951 | MS.gene037815:intron |
AAGCATAAAGTAACATACAT+GGG | 0.612839 | 8.2:-30598858 | MS.gene037815:CDS |
AGGGACATTAGGTGCTAGTG+TGG | 0.615984 | 8.2:+30599460 | None:intergenic |
GAGATGGGAGGAGCAAAACA+AGG | 0.616995 | 8.2:-30597157 | MS.gene037815:CDS |
GCAATCATATTCAAAACAGT+AGG | 0.618380 | 8.2:+30598828 | None:intergenic |
TAGGCAAGGTGTTCCACATG+TGG | 0.619834 | 8.2:-30598586 | MS.gene037815:CDS |
CGGAGGAAGAAAAGGGTCGA+CGG | 0.620477 | 8.2:-30602928 | MS.gene037815:CDS |
AATGGTTGGTGCTTAGCTTG+GGG | 0.624167 | 8.2:-30598954 | MS.gene037815:CDS |
GAATAAGGTGCAGAGAGAAG+AGG | 0.625820 | 8.2:-30597111 | MS.gene037815:CDS |
GAGGAGCAAAACAAGGAGGA+CGG | 0.628024 | 8.2:-30597150 | MS.gene037815:CDS |
TTTGTGCTTGGAGACCTGAG+TGG | 0.630741 | 8.2:-30598647 | MS.gene037815:CDS |
TCCATCATCGAAAGGATCTG+TGG | 0.631677 | 8.2:+30598732 | None:intergenic |
CAACCATTAGCATGAAACAA+TGG | 0.631816 | 8.2:+30598969 | None:intergenic |
ATCCGGCCGGGCAACTACTG+CGG | 0.634756 | 8.2:+30598260 | None:intergenic |
GTCACAAAGGCTAAGAGAGG+AGG | 0.637362 | 8.2:-30597067 | MS.gene037815:CDS |
TATGATTGCGAATTCTACAC+TGG | 0.637645 | 8.2:-30598814 | MS.gene037815:CDS |
AGGCCTAGATGTAGTGCCAG+AGG | 0.640784 | 8.2:+30599091 | None:intergenic |
GATCATGGGAATCAATGGAA+GGG | 0.644377 | 8.2:-30601076 | MS.gene037815:CDS |
TAGAAAGCTGCTCAATCACA+AGG | 0.645739 | 8.2:-30598787 | MS.gene037815:CDS |
AGAGGGAATACAGTGATGAG+TGG | 0.648241 | 8.2:-30598480 | MS.gene037815:CDS |
TCAAAGATAAAAGCTAGGCA+AGG | 0.649836 | 8.2:-30598600 | MS.gene037815:CDS |
CGCTTTGCCAAAGAGATGGG+AGG | 0.650584 | 8.2:-30597169 | MS.gene037815:CDS |
CAACTACTCGAAGTTGCTCG+AGG | 0.650856 | 8.2:-30599305 | MS.gene037815:CDS |
ACTTAATGAAAATGTCACAA+AGG | 0.651431 | 8.2:-30597080 | MS.gene037815:CDS |
TTATCTAAACTCTCTCGCAA+CGG | 0.654030 | 8.2:-30599039 | MS.gene037815:CDS |
AAGGATATAATAATATATGG+GGG | 0.654126 | 8.2:-30598345 | MS.gene037815:CDS |
AATGTCACAAAGGCTAAGAG+AGG | 0.656282 | 8.2:-30597070 | MS.gene037815:CDS |
GCCCGGCCGGATGATCATTG+GGG | 0.659512 | 8.2:-30598249 | MS.gene037815:CDS |
ACCATGGTTGAATCAACTGG+CGG | 0.659655 | 8.2:-30597634 | MS.gene037815:CDS |
AATGGAAAGATCTCGTCGAG+AGG | 0.660180 | 8.2:-30602872 | MS.gene037815:CDS |
AACAAACTAAGAACCGACCA+TGG | 0.661244 | 8.2:-30597650 | MS.gene037815:intron |
CGGAAAGGCCCTTACAACGG+CGG | 0.664687 | 8.2:-30602948 | MS.gene037815:intron |
CTGCACCACATGTTTCTGTG+AGG | 0.679321 | 8.2:+30598676 | None:intergenic |
ATCATCGAAAGGATCTGTGG+CGG | 0.687585 | 8.2:+30598735 | None:intergenic |
TCCGCCAGTTGATTCAACCA+TGG | 0.690151 | 8.2:+30597633 | None:intergenic |
CATAAAGTAACATACATGGG+AGG | 0.691585 | 8.2:-30598855 | MS.gene037815:CDS |
CCGGACCGGTCTGTTCACCC+GGG | 0.704893 | 8.2:+30597600 | None:intergenic |
AAGGTATCAGTGATAACCGG+AGG | 0.715611 | 8.2:-30598768 | MS.gene037815:CDS |
ATGGGAGGAGCAAAACAAGG+AGG | 0.728016 | 8.2:-30597154 | MS.gene037815:CDS |
ATAGGATCTAATTCACTGCG+TGG | 0.732378 | 8.2:+30599128 | None:intergenic |
GGAGTTGTCTTCAGTCACAG+AGG | 0.737629 | 8.2:-30599065 | MS.gene037815:CDS |
TATGGCCTCACAGAAACATG+TGG | 0.762816 | 8.2:-30598681 | MS.gene037815:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 30597009 | 30608013 | 30597009 | ID=MS.gene037815 |
chr8.2 | mRNA | 30597009 | 30608013 | 30597009 | ID=MS.gene037815.t1;Parent=MS.gene037815 |
chr8.2 | exon | 30607985 | 30608013 | 30607985 | ID=MS.gene037815.t1.exon1;Parent=MS.gene037815.t1 |
chr8.2 | CDS | 30607985 | 30608013 | 30607985 | ID=cds.MS.gene037815.t1;Parent=MS.gene037815.t1 |
chr8.2 | exon | 30602860 | 30602963 | 30602860 | ID=MS.gene037815.t1.exon2;Parent=MS.gene037815.t1 |
chr8.2 | CDS | 30602860 | 30602963 | 30602860 | ID=cds.MS.gene037815.t1;Parent=MS.gene037815.t1 |
chr8.2 | exon | 30601010 | 30601161 | 30601010 | ID=MS.gene037815.t1.exon3;Parent=MS.gene037815.t1 |
chr8.2 | CDS | 30601010 | 30601161 | 30601010 | ID=cds.MS.gene037815.t1;Parent=MS.gene037815.t1 |
chr8.2 | exon | 30600887 | 30600910 | 30600887 | ID=MS.gene037815.t1.exon4;Parent=MS.gene037815.t1 |
chr8.2 | CDS | 30600887 | 30600910 | 30600887 | ID=cds.MS.gene037815.t1;Parent=MS.gene037815.t1 |
chr8.2 | exon | 30598106 | 30599486 | 30598106 | ID=MS.gene037815.t1.exon5;Parent=MS.gene037815.t1 |
chr8.2 | CDS | 30598106 | 30599486 | 30598106 | ID=cds.MS.gene037815.t1;Parent=MS.gene037815.t1 |
chr8.2 | exon | 30597606 | 30597661 | 30597606 | ID=MS.gene037815.t1.exon6;Parent=MS.gene037815.t1 |
chr8.2 | CDS | 30597606 | 30597661 | 30597606 | ID=cds.MS.gene037815.t1;Parent=MS.gene037815.t1 |
chr8.2 | exon | 30597009 | 30597212 | 30597009 | ID=MS.gene037815.t1.exon7;Parent=MS.gene037815.t1 |
chr8.2 | CDS | 30597009 | 30597212 | 30597009 | ID=cds.MS.gene037815.t1;Parent=MS.gene037815.t1 |
Gene Sequence |
Protein sequence |