AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene21691

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene21691.t1 MTR_5g008800 98.548 551 8 0 1 551 1 551 0.0 1126
MS.gene21691.t1 MTR_5g008820 81.319 546 100 1 1 546 1 544 0.0 943
MS.gene21691.t1 MTR_8g074040 63.971 544 194 1 1 542 43 586 0.0 775
MS.gene21691.t1 MTR_8g074040 64.957 468 162 2 77 542 1 468 0.0 673
MS.gene21691.t1 MTR_8g074120 64.301 479 169 1 67 543 20 498 0.0 669
MS.gene21691.t1 MTR_4g121600 52.087 551 251 4 9 546 15 565 0.0 597
MS.gene21691.t1 MTR_2g044180 51.906 551 252 4 9 546 15 565 0.0 596
MS.gene21691.t1 MTR_5g076240 53.370 549 240 7 8 544 8 552 0.0 587
MS.gene21691.t1 MTR_3g064420 50.090 553 262 3 1 539 1 553 0.0 587
MS.gene21691.t1 MTR_5g076220 50.903 554 255 8 1 541 1 550 0.0 537
MS.gene21691.t1 MTR_5g076200 50.360 556 259 8 1 543 1 552 0.0 531
MS.gene21691.t1 MTR_5g023730 49.360 547 264 9 2 540 3 544 0.0 529
MS.gene21691.t1 MTR_0161s0050 50.000 560 257 8 1 543 1 554 1.73e-179 518
MS.gene21691.t1 MTR_2g044180 51.899 474 215 4 86 546 1 474 1.42e-176 507
MS.gene21691.t1 MTR_0803s0020 30.843 522 334 11 14 528 235 736 1.96e-63 225
MS.gene21691.t1 MTR_2g095510 29.135 532 319 16 29 538 42 537 4.75e-47 172
MS.gene21691.t1 MTR_8g039720 28.291 509 315 14 40 526 65 545 6.70e-47 172
MS.gene21691.t1 MTR_4g057730 28.440 545 339 14 14 538 27 540 4.59e-43 161
MS.gene21691.t1 MTR_1569s0010 26.679 551 340 12 22 533 3 528 2.21e-42 159
MS.gene21691.t1 MTR_1g026310 26.653 499 334 12 40 526 68 546 2.61e-42 159
MS.gene21691.t1 MTR_3g035130 29.057 530 324 20 19 534 18 509 2.89e-42 159
MS.gene21691.t1 MTR_2g105570 27.930 512 340 14 39 538 53 547 5.50e-41 155
MS.gene21691.t1 MTR_5g007640 27.586 551 347 17 9 538 66 585 6.58e-40 153
MS.gene21691.t1 MTR_3g460770 26.079 533 349 16 19 535 33 536 2.53e-39 151
MS.gene21691.t1 MTR_4g005750 28.571 511 330 14 40 538 53 540 5.41e-38 147
MS.gene21691.t1 MTR_3g088880 28.571 406 261 11 152 541 165 557 1.36e-37 146
MS.gene21691.t1 MTR_1g090737 26.755 527 331 15 36 542 79 570 9.06e-37 144
MS.gene21691.t1 MTR_3g088870 28.610 374 242 8 180 541 199 559 1.08e-36 144
MS.gene21691.t1 MTR_1g073180 28.175 504 317 12 41 535 62 529 9.12e-35 138
MS.gene21691.t1 MTR_4g128337 26.834 518 334 16 27 526 44 534 1.17e-34 137
MS.gene21691.t1 MTR_1g063110 26.418 564 349 16 14 551 28 551 1.40e-34 137
MS.gene21691.t1 MTR_4g077900 27.565 497 319 12 52 533 1 471 1.92e-34 136
MS.gene21691.t1 MTR_5g027500 28.628 503 318 14 52 534 81 562 7.95e-34 135
MS.gene21691.t1 MTR_1g063120 27.505 509 319 15 41 526 57 538 1.25e-33 135
MS.gene21691.t1 MTR_5g027480 28.782 542 316 18 14 534 57 549 1.46e-33 134
MS.gene21691.t1 MTR_3g035130 28.125 480 296 17 19 486 18 460 5.06e-32 129
MS.gene21691.t1 MTR_4g057730 27.637 474 295 13 14 469 27 470 2.71e-31 127
MS.gene21691.t1 MTR_2g030240 25.849 530 345 16 47 542 35 550 4.43e-31 127
MS.gene21691.t1 MTR_1g073180 27.479 484 307 11 41 516 84 531 7.52e-31 126
MS.gene21691.t1 MTR_2g095510 28.111 434 255 15 29 441 42 439 1.37e-27 116
MS.gene21691.t1 MTR_1586s0010 26.396 394 267 11 13 394 39 421 4.47e-26 111
MS.gene21691.t1 MTR_4g057730 26.696 457 287 13 14 452 27 453 7.81e-26 110
MS.gene21691.t1 MTR_2g030240 26.812 414 264 14 163 542 48 456 9.61e-26 110
MS.gene21691.t1 MTR_1054s0020 23.986 567 343 19 6 539 260 771 7.01e-24 106
MS.gene21691.t1 MTR_4g011790 27.273 385 230 13 182 534 227 593 2.12e-23 104
MS.gene21691.t1 MTR_4g011790 26.893 383 230 13 182 532 227 591 1.29e-22 102
MS.gene21691.t1 MTR_4g011790 26.650 394 230 13 182 534 227 602 3.03e-22 101
MS.gene21691.t1 MTR_4g013210 27.518 407 237 15 168 534 52 440 5.56e-21 96.3
MS.gene21691.t1 MTR_1g086600 21.881 489 308 12 41 470 100 573 4.27e-19 91.7
MS.gene21691.t1 MTR_7g109830 23.171 492 296 15 41 470 78 549 6.22e-19 90.9
MS.gene21691.t1 MTR_4g013210 27.089 395 213 16 168 534 52 399 8.90e-18 85.9
MS.gene21691.t1 MTR_4g013210 26.582 395 215 15 168 534 204 551 1.11e-17 86.7
MS.gene21691.t1 MTR_7g084850 25.139 541 344 20 37 536 200 720 1.12e-17 87.0
MS.gene21691.t1 MTR_4g013210 27.168 346 205 11 168 484 204 531 3.20e-17 85.1
MS.gene21691.t1 MTR_4g068670 22.638 508 292 23 39 474 74 552 1.39e-16 83.6
MS.gene21691.t1 MTR_1g026430 24.646 353 238 9 40 382 68 402 6.01e-15 77.4
MS.gene21691.t1 MTR_1g026470 24.294 354 240 9 40 383 68 403 4.56e-14 74.7
MS.gene21691.t1 MTR_3g087980 26.513 347 177 14 182 463 248 581 4.46e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene21691.t1 AT1G20560 68.306 549 170 1 1 545 3 551 0.0 810
MS.gene21691.t1 AT2G17650 61.151 556 202 2 1 542 48 603 0.0 723
MS.gene21691.t1 AT1G20560 68.710 473 144 1 77 545 1 473 0.0 697
MS.gene21691.t1 AT3G16910 51.449 552 254 4 9 546 17 568 0.0 603
MS.gene21691.t1 AT1G76290 53.407 543 245 4 1 540 1 538 0.0 599
MS.gene21691.t1 AT5G16370 51.361 551 253 7 1 541 1 546 0.0 570
MS.gene21691.t1 AT5G16340 50.727 550 256 6 1 540 1 545 0.0 560
MS.gene21691.t1 AT1G66120 49.453 548 268 4 1 539 1 548 0.0 550
MS.gene21691.t1 AT1G75960 50.820 549 255 6 1 539 1 544 0.0 548
MS.gene21691.t1 AT1G65880 48.022 556 272 4 1 539 1 556 0.0 541
MS.gene21691.t1 AT1G65890 48.108 555 272 4 1 539 1 555 0.0 537
MS.gene21691.t1 AT1G77240 48.358 548 270 7 1 539 1 544 0.0 535
MS.gene21691.t1 AT1G21530 47.464 552 273 8 1 539 1 548 0.0 524
MS.gene21691.t1 AT1G21540 48.282 553 268 8 1 539 1 549 0.0 521
MS.gene21691.t1 AT1G21530 47.464 552 271 9 1 539 1 546 2.82e-180 519
MS.gene21691.t1 AT1G68270 43.784 555 266 8 1 539 1 525 1.91e-155 455
MS.gene21691.t1 AT4G05160 29.487 546 328 15 17 538 30 542 9.04e-51 183
MS.gene21691.t1 AT1G20510 27.206 544 348 16 7 526 11 530 6.45e-45 167
MS.gene21691.t1 AT1G20500 27.686 484 311 12 58 529 83 539 8.04e-44 164
MS.gene21691.t1 AT5G63380 28.070 513 315 18 41 536 79 554 2.67e-41 157
MS.gene21691.t1 AT3G21240 28.265 513 326 15 39 535 63 549 5.00e-41 156
MS.gene21691.t1 AT1G20480 27.812 489 317 13 51 526 86 551 2.48e-40 154
MS.gene21691.t1 AT1G65060 26.874 547 346 15 10 535 46 559 3.49e-40 154
MS.gene21691.t1 AT3G48990 28.220 528 331 13 19 534 17 508 3.19e-39 150
MS.gene21691.t1 AT3G21230 28.872 523 326 16 38 541 74 569 3.15e-36 142
MS.gene21691.t1 AT1G20510 26.749 486 309 15 7 469 11 472 9.28e-35 137
MS.gene21691.t1 AT4G19010 26.775 493 315 13 59 534 93 556 1.82e-34 137
MS.gene21691.t1 AT5G38120 27.216 485 315 13 56 529 82 539 8.00e-34 135
MS.gene21691.t1 AT3G21230 28.831 496 305 16 38 512 74 542 5.56e-32 130
MS.gene21691.t1 AT1G62940 26.523 509 332 17 41 535 55 535 7.33e-30 124
MS.gene21691.t1 AT1G51680 26.820 522 327 15 39 535 65 556 7.98e-30 124
MS.gene21691.t1 AT5G38120 26.739 460 300 12 56 505 82 514 1.03e-29 123
MS.gene21691.t1 AT3G21240 27.517 447 283 14 39 470 63 483 2.05e-29 122
MS.gene21691.t1 AT3G21240 27.517 447 283 14 39 470 63 483 2.05e-29 122
MS.gene21691.t1 AT1G20510 26.419 458 290 15 7 441 11 444 3.69e-28 117
MS.gene21691.t1 AT1G51680 26.884 491 305 14 39 505 65 525 2.91e-27 116
MS.gene21691.t1 AT3G21230 28.041 485 298 16 10 470 40 497 1.51e-24 107
MS.gene21691.t1 AT1G30520 23.497 549 362 13 20 529 13 542 2.10e-24 107
MS.gene21691.t1 AT1G30520 23.497 549 362 13 20 529 13 542 2.10e-24 107
MS.gene21691.t1 AT3G16170 26.209 393 225 13 182 534 235 602 4.24e-23 103
MS.gene21691.t1 AT1G65060 25.442 452 284 14 10 441 46 464 4.62e-23 103
MS.gene21691.t1 AT5G38120 26.179 424 276 12 56 469 82 478 2.08e-22 100
MS.gene21691.t1 AT5G38120 26.179 424 276 12 56 469 82 478 2.08e-22 100
MS.gene21691.t1 AT2G47240 23.673 490 296 16 41 470 19 490 1.90e-21 98.6
MS.gene21691.t1 AT2G47240 23.673 490 296 16 41 470 78 549 2.01e-21 99.0
MS.gene21691.t1 AT2G47240 23.673 490 296 16 41 470 78 549 2.01e-21 99.0
MS.gene21691.t1 AT2G47240 23.673 490 296 16 41 470 78 549 2.01e-21 99.0
MS.gene21691.t1 AT1G51680 26.535 456 281 14 39 470 65 490 1.34e-20 95.5
MS.gene21691.t1 AT1G20490 25.806 372 240 11 58 418 83 429 4.53e-19 90.5
MS.gene21691.t1 AT1G20490 25.806 372 240 11 58 418 83 429 4.53e-19 90.5
MS.gene21691.t1 AT5G36880 24.364 550 337 22 37 536 195 715 4.99e-18 88.2
MS.gene21691.t1 AT5G36880 23.679 549 342 20 37 536 145 665 5.40e-18 88.2
MS.gene21691.t1 AT5G36880 23.679 549 342 20 37 536 145 665 5.40e-18 88.2
MS.gene21691.t1 AT5G36880 23.679 549 342 20 37 536 145 665 5.40e-18 88.2
MS.gene21691.t1 AT5G36880 23.679 549 342 20 37 536 145 665 5.40e-18 88.2
MS.gene21691.t1 AT1G49430 23.293 498 302 16 40 474 77 557 1.76e-17 86.3
MS.gene21691.t1 AT1G64400 25.971 489 277 19 41 466 81 547 2.61e-17 85.9
MS.gene21691.t1 AT1G30520 22.128 470 320 11 20 465 13 460 2.03e-14 76.3
MS.gene21691.t1 AT1G30520 22.128 470 320 11 20 465 13 460 2.03e-14 76.3
MS.gene21691.t1 AT4G11030 23.108 502 275 21 41 466 81 547 4.19e-13 72.4

Find 137 sgRNAs with CRISPR-Local

Find 172 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGAAGGATATTATCATATC+TGG 0.228485 5.2:-2613544 MS.gene21691:CDS
TCTCACTCCAATCAGCTTCT+TGG 0.231430 5.2:-2615197 MS.gene21691:CDS
GCAATGTATGAGTTACATTT+TGG 0.238418 5.2:-2614627 MS.gene21691:CDS
TCATACATTGCTGGAATATT+AGG 0.254760 5.2:+2614639 None:intergenic
ATTGGATCCCATTCATCTTT+TGG 0.275746 5.2:+2614324 None:intergenic
CTTTAGCAGTTACATTTCTT+TGG 0.277220 5.2:+2614097 None:intergenic
GAAGTGTAATTCAAAGAAAT+TGG 0.280408 5.2:+2614306 None:intergenic
AACTACCAATCTTCCACTTT+TGG 0.288627 5.2:-2614448 MS.gene21691:CDS
AGTCTATGCCGGTGTATTTA+TGG 0.290959 5.2:-2614194 MS.gene21691:CDS
CCATGGGTGAGGTGATGTTT+AGG 0.293811 5.2:-2613696 MS.gene21691:CDS
CATTTAAAGGTGGATGGTTT+AGG 0.293868 5.2:-2613621 MS.gene21691:CDS
GCAACACAAGAGTCATTTAA+AGG 0.314268 5.2:-2613634 MS.gene21691:CDS
AGGTGCTTATCTTAATTCTT+TGG 0.316766 5.2:-2614241 MS.gene21691:CDS
CGAGACAGGCTACTCCATTC+TGG 0.326334 5.2:+2613829 None:intergenic
ATGAATCATGACGAGTGTTC+AGG 0.336501 5.2:+2614574 None:intergenic
TATGGTTTGACAGAAACTTA+TGG 0.346969 5.2:-2613877 MS.gene21691:CDS
TGGGAGACCTGATGAGTATT+GGG 0.357069 5.2:-2613446 MS.gene21691:CDS
TTTGATTTAGTTCATTCATA+TGG 0.364655 5.2:-2613895 MS.gene21691:CDS
GTAATTCATGATCTACAAAA+AGG 0.367573 5.2:+2614511 None:intergenic
GATATCAGAAAGCCACTTCC+GGG 0.373117 5.2:-2613988 MS.gene21691:CDS
TGATATCAGAAAGCCACTTC+CGG 0.382311 5.2:-2613989 MS.gene21691:CDS
AATTAAGATAAGCACCTCTA+TGG 0.382407 5.2:+2614247 None:intergenic
CATGGGTGAGGTGATGTTTA+GGG 0.382589 5.2:-2613695 MS.gene21691:CDS
GTCTTGCCGGTTGATGTCTT+TGG 0.393924 5.2:+2613295 None:intergenic
TGGCTATATACTACACCTTT+AGG 0.394178 5.2:+2614267 None:intergenic
CAAAGAAATGTAACTGCTAA+AGG 0.396156 5.2:-2614096 MS.gene21691:CDS
AAATGTAACTCATACATTGC+TGG 0.404886 5.2:+2614630 None:intergenic
ATTTCTTTGAATTACACTTC+AGG 0.409528 5.2:-2614303 MS.gene21691:CDS
TGACGGTTACATAGAACTTA+AGG 0.410660 5.2:-2613572 MS.gene21691:CDS
ATGGTTTAGGACTGGTGACT+TGG 0.411295 5.2:-2613608 MS.gene21691:CDS
TCCAAAATTAAGACCAAAAG+TGG 0.416587 5.2:+2614435 None:intergenic
GGAAGTGGCTTTCTGATATC+AGG 0.427800 5.2:+2613991 None:intergenic
ATTCTCATAGATCAATGTTC+CGG 0.429813 5.2:+2614386 None:intergenic
GTTGTTGAGGCAGCTGTTGT+TGG 0.430997 5.2:-2613466 MS.gene21691:CDS
TGAAAAGACCAAAAGATGAA+TGG 0.437562 5.2:-2614332 MS.gene21691:CDS
TTCTCATAGATCAATGTTCC+GGG 0.441818 5.2:+2614387 None:intergenic
TCGCCTGCTCCTCTCGAGAC+AGG 0.444470 5.2:+2613815 None:intergenic
CTCAAAATCAAGTTTCCCTT+CGG 0.445425 5.2:+2614356 None:intergenic
GAAGGAGAAGGCAAAGGCTA+TGG 0.446378 5.2:-2613257 MS.gene21691:CDS
GAAAAGACCAAAAGATGAAT+GGG 0.450929 5.2:-2614331 MS.gene21691:CDS
GAGCGCTCCAAGAAGCTGAT+TGG 0.451334 5.2:+2615190 None:intergenic
TAGCCTGTCTCGAGAGGAGC+AGG 0.452101 5.2:-2613818 MS.gene21691:CDS
CCATGTTTCATTGCAATGGA+TGG 0.452299 5.2:-2614164 MS.gene21691:CDS
GTCTCTCCCCAATACTCATC+AGG 0.454603 5.2:+2613439 None:intergenic
TAAGACCAAAAGTGGAAGAT+TGG 0.454652 5.2:+2614443 None:intergenic
CGAAGGATATTATCATATCT+GGG 0.456932 5.2:-2613543 MS.gene21691:CDS
GCAATGGATGGTGTCTTCCT+TGG 0.459486 5.2:-2614152 MS.gene21691:CDS
AAAGAAATGTAACTGCTAAA+GGG 0.463695 5.2:-2614095 MS.gene21691:CDS
CACTCGTCATGATTCATCAA+TGG 0.465785 5.2:-2614568 MS.gene21691:CDS
TTGTTGAGGCAGCTGTTGTT+GGG 0.470119 5.2:-2613465 MS.gene21691:CDS
ACAGCTGCCTCAACAACTGC+TGG 0.470476 5.2:+2613472 None:intergenic
CGTCAAGGAGTACAACATAT+TGG 0.470912 5.2:-2613781 MS.gene21691:CDS
GTTCCCATGTTTCATTGCAA+TGG 0.474688 5.2:-2614168 MS.gene21691:CDS
ATTAATGAGTTCAGAACTGT+TGG 0.476604 5.2:+2614024 None:intergenic
AGAAACACCGAGTTGAGAAA+TGG 0.477163 5.2:+2615072 None:intergenic
GATCTGCCAAAGACATCAAC+CGG 0.477410 5.2:-2613301 MS.gene21691:CDS
TTGACAGAAACTTATGGTCC+TGG 0.482770 5.2:-2613871 MS.gene21691:CDS
AAAGGTGGATGGTTTAGGAC+TGG 0.483012 5.2:-2613616 MS.gene21691:CDS
CGGTGTTTCTCCTCATGATG+TGG 0.485617 5.2:-2615059 MS.gene21691:intron
TTGGGAGACCTGATGAGTAT+TGG 0.488351 5.2:-2613447 MS.gene21691:CDS
GGGAAGGTGGTAGTGATGAC+AGG 0.490755 5.2:-2613967 MS.gene21691:CDS
TTCCATGTGCAAATTGATCC+AGG 0.491293 5.2:+2613853 None:intergenic
CCATCCATTGCAATGAAACA+TGG 0.496766 5.2:+2614164 None:intergenic
GAACGTAGTTAGCGTTGCAT+TGG 0.497591 5.2:+2615221 None:intergenic
TGAATTACTTGATATTGCTA+AGG 0.502727 5.2:-2614496 MS.gene21691:CDS
ACTACCACCTTCCCCGGAAG+TGG 0.505110 5.2:+2613976 None:intergenic
TGGTTTAGGACTGGTGACTT+GGG 0.510160 5.2:-2613607 MS.gene21691:CDS
AAACATTAGCACCATTGAGT+TGG 0.513653 5.2:-2613515 MS.gene21691:CDS
TGTGATGAATGGATATCTAA+AGG 0.519167 5.2:-2613665 MS.gene21691:CDS
AGGCGGTGCTCCACCGCCAC+CGG 0.520554 5.2:-2613947 MS.gene21691:CDS
GCTTCTTCCATTTCTCAACT+CGG 0.522221 5.2:-2615079 MS.gene21691:CDS
TGAATCATGACGAGTGTTCA+GGG 0.523547 5.2:+2614575 None:intergenic
AATAACACCTTCCAACTCAA+TGG 0.523579 5.2:+2613504 None:intergenic
GTCATCACTACCACCTTCCC+CGG 0.524833 5.2:+2613970 None:intergenic
GGAACAACATCAAGTCCTAA+AGG 0.525359 5.2:-2614282 MS.gene21691:CDS
TTTGCACATGGAAACCAGAA+TGG 0.525741 5.2:-2613843 MS.gene21691:CDS
AGGGGAAACACTGTGATGAA+TGG 0.526822 5.2:-2613676 MS.gene21691:CDS
CATAGAACAGCCCCTGACAT+TGG 0.528095 5.2:+2614600 None:intergenic
ATTTGTGTAGGTCGCTCTGT+TGG 0.536183 5.2:-2614664 MS.gene21691:intron
CCTTGGAGTATTGCTGCTCA+AGG 0.538223 5.2:-2614135 MS.gene21691:CDS
CTTTAGAAATGTATTACAGT+CGG 0.538466 5.2:+2613206 None:intergenic
GGTGACATCGTTGTAGATGA+TGG 0.538839 5.2:+2615141 None:intergenic
GCTCATCCATCAGTCTCTCC+CGG 0.539601 5.2:-2614405 MS.gene21691:CDS
CAGAAAGCCACTTCCGGGGA+AGG 0.540398 5.2:-2613983 MS.gene21691:CDS
AAGAGTCATTTAAAGGTGGA+TGG 0.546163 5.2:-2613627 MS.gene21691:CDS
GAATTACTTGATATTGCTAA+GGG 0.549278 5.2:-2614495 MS.gene21691:CDS
AATGTTCCGGGAGAGACTGA+TGG 0.553323 5.2:+2614399 None:intergenic
TATGAGAATCTTATATCCGA+AGG 0.561953 5.2:-2614372 MS.gene21691:CDS
GGTACACTCTTCATTGTGAC+AGG 0.562785 5.2:+2613733 None:intergenic
TTGTGCGTTTGTGAAGTTGA+AGG 0.562819 5.2:-2613413 MS.gene21691:CDS
AAGGAGAAGGCAAAGGCTAT+GGG 0.567730 5.2:-2613256 MS.gene21691:CDS
AGTTAGAAGGTGACGATGGA+AGG 0.571786 5.2:-2615250 None:intergenic
CAATGAGATGAAGTCTATGC+CGG 0.575034 5.2:-2614205 MS.gene21691:CDS
CCTAAACATCACCTCACCCA+TGG 0.581531 5.2:+2613696 None:intergenic
GAAGGAAGGGCACAATGCTA+CGG 0.582366 5.2:-2613395 MS.gene21691:CDS
TTCAACTTCACAAACGCACA+AGG 0.594360 5.2:+2613415 None:intergenic
AAAGCCACTTCCGGGGAAGG+TGG 0.595851 5.2:-2613980 MS.gene21691:CDS
AGGAGTACAACATATTGGAC+TGG 0.595988 5.2:-2613776 MS.gene21691:CDS
AAGAAGCTGATTGGAGTGAG+AGG 0.599442 5.2:+2615199 None:intergenic
GACTTTGTTACTGTAAACAA+TGG 0.601480 5.2:+2615165 None:intergenic
GTACAACATATTGGACTGGA+AGG 0.601901 5.2:-2613772 MS.gene21691:CDS
TAGTCATCCAGCAGTTGTTG+AGG 0.610515 5.2:-2613479 MS.gene21691:CDS
AAGCACAAAGTAACACACAC+GGG 0.611637 5.2:-2614054 MS.gene21691:CDS
ATTAGCACCATTGAGTTGGA+AGG 0.615739 5.2:-2613511 MS.gene21691:CDS
CATCCATTGCAATGAAACAT+GGG 0.616932 5.2:+2614165 None:intergenic
AAGGAACAAACCACATCATG+AGG 0.618013 5.2:+2615049 None:intergenic
ATGGAGTAGCCTGTCTCGAG+AGG 0.618262 5.2:-2613824 MS.gene21691:CDS
GCGTTTGTGAAGTTGAAGGA+AGG 0.622603 5.2:-2613409 MS.gene21691:CDS
TGGAGTATTGCTGCTCAAGG+TGG 0.625763 5.2:-2614132 MS.gene21691:CDS
GAAGGATATTATCATATCTG+GGG 0.626950 5.2:-2613542 MS.gene21691:CDS
ATGAGAATCTTATATCCGAA+GGG 0.627897 5.2:-2614371 MS.gene21691:CDS
ATGGGTGAGGTGATGTTTAG+GGG 0.630548 5.2:-2613694 MS.gene21691:CDS
TGTCACAATGAAGAGTGTAC+CGG 0.633282 5.2:-2613731 MS.gene21691:CDS
AGAACTTAAGGATCGGTCGA+AGG 0.636389 5.2:-2613560 MS.gene21691:CDS
TTGGGAGTAAAGCATTCTGA+CGG 0.644221 5.2:-2613589 MS.gene21691:CDS
CCGGCTGATGCGAAAACCAT+GGG 0.646339 5.2:-2613712 MS.gene21691:CDS
CGTTTGTGAAGTTGAAGGAA+GGG 0.650987 5.2:-2613408 MS.gene21691:CDS
ACACAAGAGTCATTTAAAGG+TGG 0.651781 5.2:-2613631 MS.gene21691:CDS
GGAACACACCATAAATACAC+CGG 0.652672 5.2:+2614186 None:intergenic
CCTTGAGCAGCAATACTCCA+AGG 0.654172 5.2:+2614135 None:intergenic
GTCCTGGATCAATTTGCACA+TGG 0.656520 5.2:-2613855 MS.gene21691:CDS
TTTGTTACTGTAAACAATGG+CGG 0.659420 5.2:+2615168 None:intergenic
TAAGCACAAAGTAACACACA+CGG 0.660502 5.2:-2614055 MS.gene21691:CDS
AGTGGCTTTCTGATATCAGG+TGG 0.661622 5.2:+2613994 None:intergenic
GGTGTAGTATATAGCCATAG+AGG 0.662140 5.2:-2614261 MS.gene21691:CDS
TGATGCGAAAACCATGGGTG+AGG 0.664777 5.2:-2613707 MS.gene21691:CDS
GTTACATAGAACTTAAGGAT+CGG 0.668885 5.2:-2613567 MS.gene21691:CDS
AAGGATATTATCATATCTGG+GGG 0.669368 5.2:-2613541 MS.gene21691:CDS
ATATCAGAAAGCCACTTCCG+GGG 0.673117 5.2:-2613987 MS.gene21691:CDS
ACCGGCTGATGCGAAAACCA+TGG 0.679532 5.2:-2613713 MS.gene21691:CDS
ACAACGATGTCACCTACACA+TGG 0.682235 5.2:-2615132 MS.gene21691:CDS
AGCACAAAGTAACACACACG+GGG 0.696294 5.2:-2614053 MS.gene21691:CDS
AAGGTGGTAGTGATGACAGG+CGG 0.702964 5.2:-2613964 MS.gene21691:CDS
GGGAGACCTGATGAGTATTG+GGG 0.710890 5.2:-2613445 MS.gene21691:CDS
ATGAGTCTGAGACCATGTGT+AGG 0.729803 5.2:+2615120 None:intergenic
CACAAAGTAACACACACGGG+GGG 0.730025 5.2:-2614051 MS.gene21691:CDS
GCACAAAGTAACACACACGG+GGG 0.764468 5.2:-2614052 MS.gene21691:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTGAATTTGTTTGAAAA+AGG + chr5.2:2613427-2613446 None:intergenic 15.0%
!!! GATTTTTTTTCTGTTAATTT+TGG - chr5.2:2613503-2613522 MS.gene21691:CDS 15.0%
!!! TTTGATTTAGTTCATTCATA+TGG - chr5.2:2614559-2614578 MS.gene21691:CDS 20.0%
! AAAGAAATGTAACTGCTAAA+GGG - chr5.2:2614359-2614378 MS.gene21691:CDS 25.0%
! AAATTTGCACTTATTTGTGT+AGG - chr5.2:2613778-2613797 MS.gene21691:CDS 25.0%
! AATCATATTTACATGTTCCA+TGG + chr5.2:2613684-2613703 None:intergenic 25.0%
! ATTTCTTTGAATTACACTTC+AGG - chr5.2:2614151-2614170 MS.gene21691:CDS 25.0%
! GAAGTGTAATTCAAAGAAAT+TGG + chr5.2:2614151-2614170 None:intergenic 25.0%
! GAATTACTTGATATTGCTAA+GGG - chr5.2:2613959-2613978 MS.gene21691:CDS 25.0%
! GAGGAAATATGATTATAAGT+TGG - chr5.2:2613720-2613739 MS.gene21691:CDS 25.0%
! GTAATTCATGATCTACAAAA+AGG + chr5.2:2613946-2613965 None:intergenic 25.0%
! TGAATTACTTGATATTGCTA+AGG - chr5.2:2613958-2613977 MS.gene21691:CDS 25.0%
!!! AAAATATGTTTTGAAGGAGA+AGG - chr5.2:2615185-2615204 MS.gene21691:CDS 25.0%
!!! GACACAAAAATATGTTTTGA+AGG - chr5.2:2615179-2615198 MS.gene21691:CDS 25.0%
!!! TAATCTAGCGATTTTTCAAT+TGG - chr5.2:2613476-2613495 MS.gene21691:CDS 25.0%
!!! TTAATTTTGGTTTTGATCGA+AGG - chr5.2:2613516-2613535 MS.gene21691:CDS 25.0%
AAATGTAACTCATACATTGC+TGG + chr5.2:2613827-2613846 None:intergenic 30.0%
AAGGATATTATCATATCTGG+GGG - chr5.2:2614913-2614932 MS.gene21691:intron 30.0%
AATTAAGATAAGCACCTCTA+TGG + chr5.2:2614210-2614229 None:intergenic 30.0%
AGGTGCTTATCTTAATTCTT+TGG - chr5.2:2614213-2614232 MS.gene21691:CDS 30.0%
ATGAGAATCTTATATCCGAA+GGG - chr5.2:2614083-2614102 MS.gene21691:CDS 30.0%
ATTAATGAGTTCAGAACTGT+TGG + chr5.2:2614433-2614452 None:intergenic 30.0%
ATTCTCATAGATCAATGTTC+CGG + chr5.2:2614071-2614090 None:intergenic 30.0%
CAAAGAAATGTAACTGCTAA+AGG - chr5.2:2614358-2614377 MS.gene21691:CDS 30.0%
CGAAGGATATTATCATATCT+GGG - chr5.2:2614911-2614930 MS.gene21691:intron 30.0%
CTTTAGCAGTTACATTTCTT+TGG + chr5.2:2614360-2614379 None:intergenic 30.0%
GAAAAGACCAAAAGATGAAT+GGG - chr5.2:2614123-2614142 MS.gene21691:CDS 30.0%
GAAGGATATTATCATATCTG+GGG - chr5.2:2614912-2614931 MS.gene21691:intron 30.0%
GACTTTGTTACTGTAAACAA+TGG + chr5.2:2613292-2613311 None:intergenic 30.0%
GATATTATAAAGCACAGACT+CGG + chr5.2:2613644-2613663 None:intergenic 30.0%
GTTACATAGAACTTAAGGAT+CGG - chr5.2:2614887-2614906 MS.gene21691:intron 30.0%
TATGAGAATCTTATATCCGA+AGG - chr5.2:2614082-2614101 MS.gene21691:CDS 30.0%
TATGGTTTGACAGAAACTTA+TGG - chr5.2:2614577-2614596 MS.gene21691:CDS 30.0%
TCATACATTGCTGGAATATT+AGG + chr5.2:2613818-2613837 None:intergenic 30.0%
TCCAAAATTAAGACCAAAAG+TGG + chr5.2:2614022-2614041 None:intergenic 30.0%
TCGAAGGATATTATCATATC+TGG - chr5.2:2614910-2614929 MS.gene21691:intron 30.0%
TGAAAAGACCAAAAGATGAA+TGG - chr5.2:2614122-2614141 MS.gene21691:CDS 30.0%
TGTGATGAATGGATATCTAA+AGG - chr5.2:2614789-2614808 MS.gene21691:intron 30.0%
TTTGTTACTGTAAACAATGG+CGG + chr5.2:2613289-2613308 None:intergenic 30.0%
! AACTACTTAGAATTTTGCCA+TGG - chr5.2:2613664-2613683 MS.gene21691:CDS 30.0%
! GCAATGTATGAGTTACATTT+TGG - chr5.2:2613827-2613846 MS.gene21691:CDS 30.0%
!! AACATATTTTTGTGTCTTGC+CGG + chr5.2:2615175-2615194 None:intergenic 30.0%
!!! ACTTTTGGTCTTAATTTTGG+AGG - chr5.2:2614021-2614040 MS.gene21691:CDS 30.0%
!!! ATTTTTTAGGATGGAAGAAC+TGG - chr5.2:2614534-2614553 MS.gene21691:CDS 30.0%
!!! CTTTTGGTCTTAATTTTGGA+GGG - chr5.2:2614022-2614041 MS.gene21691:CDS 30.0%
!!! TCCACTTTTGGTCTTAATTT+TGG - chr5.2:2614018-2614037 MS.gene21691:CDS 30.0%
!!! TTTTTTAGGATGGAAGAACT+GGG - chr5.2:2614535-2614554 MS.gene21691:CDS 30.0%
AAACATTAGCACCATTGAGT+TGG - chr5.2:2614939-2614958 MS.gene21691:intron 35.0%
AAGAGTCATTTAAAGGTGGA+TGG - chr5.2:2614827-2614846 MS.gene21691:intron 35.0%
AATAACACCTTCCAACTCAA+TGG + chr5.2:2614953-2614972 None:intergenic 35.0%
ACACAAGAGTCATTTAAAGG+TGG - chr5.2:2614823-2614842 MS.gene21691:intron 35.0%
CATCCATTGCAATGAAACAT+GGG + chr5.2:2614292-2614311 None:intergenic 35.0%
CATTTAAAGGTGGATGGTTT+AGG - chr5.2:2614833-2614852 MS.gene21691:intron 35.0%
CTCAAAATCAAGTTTCCCTT+CGG + chr5.2:2614101-2614120 None:intergenic 35.0%
GCAACACAAGAGTCATTTAA+AGG - chr5.2:2614820-2614839 MS.gene21691:intron 35.0%
TAAGACCAAAAGTGGAAGAT+TGG + chr5.2:2614014-2614033 None:intergenic 35.0%
TAAGCACAAAGTAACACACA+CGG - chr5.2:2614399-2614418 MS.gene21691:CDS 35.0%
TCACATATTCACATGTGTCT+AGG + chr5.2:2613573-2613592 None:intergenic 35.0%
TCCATCCTAAAAAATACGTC+CGG + chr5.2:2614529-2614548 None:intergenic 35.0%
TGACGGTTACATAGAACTTA+AGG - chr5.2:2614882-2614901 MS.gene21691:intron 35.0%
TGGCTATATACTACACCTTT+AGG + chr5.2:2614190-2614209 None:intergenic 35.0%
TTCTCATAGATCAATGTTCC+GGG + chr5.2:2614070-2614089 None:intergenic 35.0%
! AACTACCAATCTTCCACTTT+TGG - chr5.2:2614006-2614025 MS.gene21691:CDS 35.0%
! ATTGGATCCCATTCATCTTT+TGG + chr5.2:2614133-2614152 None:intergenic 35.0%
!!! ATTTTGGTGTTCCAATGTCA+GGG - chr5.2:2613843-2613862 MS.gene21691:CDS 35.0%
AAGCACAAAGTAACACACAC+GGG - chr5.2:2614400-2614419 MS.gene21691:CDS 40.0%
AAGGAACAAACCACATCATG+AGG + chr5.2:2613408-2613427 None:intergenic 40.0%
AGTCTATGCCGGTGTATTTA+TGG - chr5.2:2614260-2614279 MS.gene21691:CDS 40.0%
ATCCTAAAAAATACGTCCGG+TGG + chr5.2:2614526-2614545 None:intergenic 40.0%
ATGAATCATGACGAGTGTTC+AGG + chr5.2:2613883-2613902 None:intergenic 40.0%
CAATGAGATGAAGTCTATGC+CGG - chr5.2:2614249-2614268 MS.gene21691:CDS 40.0%
CACTCGTCATGATTCATCAA+TGG - chr5.2:2613886-2613905 MS.gene21691:CDS 40.0%
CCATCCATTGCAATGAAACA+TGG + chr5.2:2614293-2614312 None:intergenic 40.0%
CCATGTTTCATTGCAATGGA+TGG - chr5.2:2614290-2614309 MS.gene21691:CDS 40.0%
CGTTTGTGAAGTTGAAGGAA+GGG - chr5.2:2615046-2615065 MS.gene21691:intron 40.0%
GCTTCTTCCATTTCTCAACT+CGG - chr5.2:2613375-2613394 MS.gene21691:CDS 40.0%
GGAACAACATCAAGTCCTAA+AGG - chr5.2:2614172-2614191 MS.gene21691:CDS 40.0%
GGAACACACCATAAATACAC+CGG + chr5.2:2614271-2614290 None:intergenic 40.0%
GGTGTAGTATATAGCCATAG+AGG - chr5.2:2614193-2614212 MS.gene21691:CDS 40.0%
GTTCCCATGTTTCATTGCAA+TGG - chr5.2:2614286-2614305 MS.gene21691:CDS 40.0%
TGAATCATGACGAGTGTTCA+GGG + chr5.2:2613882-2613901 None:intergenic 40.0%
TGATATCAGAAAGCCACTTC+CGG - chr5.2:2614465-2614484 MS.gene21691:CDS 40.0%
TTCAACTTCACAAACGCACA+AGG + chr5.2:2615042-2615061 None:intergenic 40.0%
TTCCATGTGCAAATTGATCC+AGG + chr5.2:2614604-2614623 None:intergenic 40.0%
TTGACAGAAACTTATGGTCC+TGG - chr5.2:2614583-2614602 MS.gene21691:CDS 40.0%
TTGTGCGTTTGTGAAGTTGA+AGG - chr5.2:2615041-2615060 MS.gene21691:intron 40.0%
TTTGCACATGGAAACCAGAA+TGG - chr5.2:2614611-2614630 MS.gene21691:CDS 40.0%
! AGAAACACCGAGTTGAGAAA+TGG + chr5.2:2613385-2613404 None:intergenic 40.0%
! AGGAGTACAACATATTGGAC+TGG - chr5.2:2614678-2614697 MS.gene21691:intron 40.0%
! CGAAGGGAAACTTGATTTTG+AGG - chr5.2:2614099-2614118 MS.gene21691:CDS 40.0%
! CGTCAAGGAGTACAACATAT+TGG - chr5.2:2614673-2614692 MS.gene21691:intron 40.0%
! GTACAACATATTGGACTGGA+AGG - chr5.2:2614682-2614701 MS.gene21691:intron 40.0%
! TCAGCAAACACGACAGTTTT+TGG + chr5.2:2615135-2615154 None:intergenic 40.0%
! TGTCACAATGAAGAGTGTAC+CGG - chr5.2:2614723-2614742 MS.gene21691:intron 40.0%
! TTGGGAGTAAAGCATTCTGA+CGG - chr5.2:2614865-2614884 MS.gene21691:intron 40.0%
!! AAAGCGTTTGCCTCGTTTTA+TGG - chr5.2:2615107-2615126 MS.gene21691:CDS 40.0%
!! ATTAGCACCATTGAGTTGGA+AGG - chr5.2:2614943-2614962 MS.gene21691:intron 40.0%
!!! ACCGGACGTATTTTTTAGGA+TGG - chr5.2:2614525-2614544 MS.gene21691:CDS 40.0%
!!! CATTTTGGTGTTCCAATGTC+AGG - chr5.2:2613842-2613861 MS.gene21691:CDS 40.0%
!!! GTTTTTGGAGCCATAAAACG+AGG + chr5.2:2615120-2615139 None:intergenic 40.0%
!!! TGTTTTGAAGGAGAAGGCAA+AGG - chr5.2:2615191-2615210 MS.gene21691:CDS 40.0%
!!! TTTTGGTGTTCCAATGTCAG+GGG - chr5.2:2613844-2613863 MS.gene21691:CDS 40.0%
AAGAAGCTGATTGGAGTGAG+AGG + chr5.2:2613258-2613277 None:intergenic 45.0%
AAGGAGAAGGCAAAGGCTAT+GGG - chr5.2:2615198-2615217 MS.gene21691:CDS 45.0%
ACAACGATGTCACCTACACA+TGG - chr5.2:2613322-2613341 MS.gene21691:CDS 45.0%
AGAACTTAAGGATCGGTCGA+AGG - chr5.2:2614894-2614913 MS.gene21691:intron 45.0%
AGCACAAAGTAACACACACG+GGG - chr5.2:2614401-2614420 MS.gene21691:CDS 45.0%
AGGGGAAACACTGTGATGAA+TGG - chr5.2:2614778-2614797 MS.gene21691:intron 45.0%
AGTGGCTTTCTGATATCAGG+TGG + chr5.2:2614463-2614482 None:intergenic 45.0%
ATATCAGAAAGCCACTTCCG+GGG - chr5.2:2614467-2614486 MS.gene21691:CDS 45.0%
ATGGGTGAGGTGATGTTTAG+GGG - chr5.2:2614760-2614779 MS.gene21691:intron 45.0%
ATTTGTGTAGGTCGCTCTGT+TGG - chr5.2:2613790-2613809 MS.gene21691:CDS 45.0%
CATGGGTGAGGTGATGTTTA+GGG - chr5.2:2614759-2614778 MS.gene21691:intron 45.0%
CTAAAAAATACGTCCGGTGG+CGG + chr5.2:2614523-2614542 None:intergenic 45.0%
GAACGTAGTTAGCGTTGCAT+TGG + chr5.2:2613236-2613255 None:intergenic 45.0%
GATATCAGAAAGCCACTTCC+GGG - chr5.2:2614466-2614485 MS.gene21691:CDS 45.0%
GATCTGCCAAAGACATCAAC+CGG - chr5.2:2615153-2615172 MS.gene21691:CDS 45.0%
GCGAAAAAGAAGTCACGTCA+AGG - chr5.2:2614658-2614677 MS.gene21691:intron 45.0%
GCGTTTGTGAAGTTGAAGGA+AGG - chr5.2:2615045-2615064 MS.gene21691:intron 45.0%
GGAAGTGGCTTTCTGATATC+AGG + chr5.2:2614466-2614485 None:intergenic 45.0%
GGTACACTCTTCATTGTGAC+AGG + chr5.2:2614724-2614743 None:intergenic 45.0%
GGTGACATCGTTGTAGATGA+TGG + chr5.2:2613316-2613335 None:intergenic 45.0%
GTATCCGACATTTGTCTGTC+TGG - chr5.2:2613547-2613566 MS.gene21691:CDS 45.0%
GTCCTGGATCAATTTGCACA+TGG - chr5.2:2614599-2614618 MS.gene21691:CDS 45.0%
TAGGCCAGACAGACAAATGT+CGG + chr5.2:2613554-2613573 None:intergenic 45.0%
TAGTCATCCAGCAGTTGTTG+AGG - chr5.2:2614975-2614994 MS.gene21691:intron 45.0%
TCTCACTCCAATCAGCTTCT+TGG - chr5.2:2613257-2613276 MS.gene21691:CDS 45.0%
TGGGAGACCTGATGAGTATT+GGG - chr5.2:2615008-2615027 MS.gene21691:intron 45.0%
TTGGGAGACCTGATGAGTAT+TGG - chr5.2:2615007-2615026 MS.gene21691:intron 45.0%
TTGTTGAGGCAGCTGTTGTT+GGG - chr5.2:2614989-2615008 MS.gene21691:intron 45.0%
! AAAGGTGGATGGTTTAGGAC+TGG - chr5.2:2614838-2614857 MS.gene21691:intron 45.0%
! ATGAGTCTGAGACCATGTGT+AGG + chr5.2:2613337-2613356 None:intergenic 45.0%
! ATGGTTTAGGACTGGTGACT+TGG - chr5.2:2614846-2614865 MS.gene21691:intron 45.0%
! TGGTTTAGGACTGGTGACTT+GGG - chr5.2:2614847-2614866 MS.gene21691:intron 45.0%
!!! ATTATAATTTTTTATTTAAG+AGG - chr5.2:2613701-2613720 MS.gene21691:CDS 5.0%
AATGTTCCGGGAGAGACTGA+TGG + chr5.2:2614058-2614077 None:intergenic 50.0%
CACAAAGTAACACACACGGG+GGG - chr5.2:2614403-2614422 MS.gene21691:CDS 50.0%
CATAGAACAGCCCCTGACAT+TGG + chr5.2:2613857-2613876 None:intergenic 50.0%
CCATGGGTGAGGTGATGTTT+AGG - chr5.2:2614758-2614777 MS.gene21691:intron 50.0%
CCTAAACATCACCTCACCCA+TGG + chr5.2:2614761-2614780 None:intergenic 50.0%
CCTTGAGCAGCAATACTCCA+AGG + chr5.2:2614322-2614341 None:intergenic 50.0%
CGGTGTTTCTCCTCATGATG+TGG - chr5.2:2613395-2613414 MS.gene21691:CDS 50.0%
GAAGGAGAAGGCAAAGGCTA+TGG - chr5.2:2615197-2615216 MS.gene21691:CDS 50.0%
GCAATGGATGGTGTCTTCCT+TGG - chr5.2:2614302-2614321 MS.gene21691:CDS 50.0%
GCACAAAGTAACACACACGG+GGG - chr5.2:2614402-2614421 MS.gene21691:CDS 50.0%
GTCTCTCCCCAATACTCATC+AGG + chr5.2:2615018-2615037 None:intergenic 50.0%
GTTGTTGAGGCAGCTGTTGT+TGG - chr5.2:2614988-2615007 MS.gene21691:intron 50.0%
TGATGCGAAAACCATGGGTG+AGG - chr5.2:2614747-2614766 MS.gene21691:intron 50.0%
! AAGGTGGTAGTGATGACAGG+CGG - chr5.2:2614490-2614509 MS.gene21691:CDS 50.0%
! GAAGGAAGGGCACAATGCTA+CGG - chr5.2:2615059-2615078 MS.gene21691:intron 50.0%
! GGGAGACCTGATGAGTATTG+GGG - chr5.2:2615009-2615028 MS.gene21691:intron 50.0%
! GTCTTGCCGGTTGATGTCTT+TGG + chr5.2:2615162-2615181 None:intergenic 50.0%
!! CCTTGGAGTATTGCTGCTCA+AGG - chr5.2:2614319-2614338 MS.gene21691:CDS 50.0%
!! TGGAGTATTGCTGCTCAAGG+TGG - chr5.2:2614322-2614341 MS.gene21691:CDS 50.0%
!!! CGCCACCGGACGTATTTTTT+AGG - chr5.2:2614521-2614540 MS.gene21691:CDS 50.0%
ACAGCTGCCTCAACAACTGC+TGG + chr5.2:2614985-2615004 None:intergenic 55.0%
ACCGGCTGATGCGAAAACCA+TGG - chr5.2:2614741-2614760 MS.gene21691:intron 55.0%
ATGGAGTAGCCTGTCTCGAG+AGG - chr5.2:2614630-2614649 MS.gene21691:CDS 55.0%
CCGGCTGATGCGAAAACCAT+GGG - chr5.2:2614742-2614761 MS.gene21691:intron 55.0%
CGAGACAGGCTACTCCATTC+TGG + chr5.2:2614628-2614647 None:intergenic 55.0%
GAGCGCTCCAAGAAGCTGAT+TGG + chr5.2:2613267-2613286 None:intergenic 55.0%
GCTCATCCATCAGTCTCTCC+CGG - chr5.2:2614049-2614068 MS.gene21691:CDS 55.0%
GTCATCACTACCACCTTCCC+CGG + chr5.2:2614487-2614506 None:intergenic 55.0%
! AAAAATACGTCCGGTGGCGG+TGG + chr5.2:2614520-2614539 None:intergenic 55.0%
! CCCATGGTTTTCGCATCAGC+CGG + chr5.2:2614745-2614764 None:intergenic 55.0%
! GGGAAGGTGGTAGTGATGAC+AGG - chr5.2:2614487-2614506 MS.gene21691:CDS 55.0%
AAAGCCACTTCCGGGGAAGG+TGG - chr5.2:2614474-2614493 MS.gene21691:CDS 60.0%
ACTACCACCTTCCCCGGAAG+TGG + chr5.2:2614481-2614500 None:intergenic 60.0%
CAGAAAGCCACTTCCGGGGA+AGG - chr5.2:2614471-2614490 MS.gene21691:CDS 60.0%
TAGCCTGTCTCGAGAGGAGC+AGG - chr5.2:2614636-2614655 MS.gene21691:CDS 60.0%
TCGCCTGCTCCTCTCGAGAC+AGG + chr5.2:2614642-2614661 None:intergenic 65.0%
AGGCGGTGCTCCACCGCCAC+CGG - chr5.2:2614507-2614526 MS.gene21691:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 2613219 2615257 2613219 ID=MS.gene21691
chr5.2 mRNA 2613219 2615257 2613219 ID=MS.gene21691.t1;Parent=MS.gene21691
chr5.2 exon 2615060 2615257 2615060 ID=MS.gene21691.t1.exon1;Parent=MS.gene21691.t1
chr5.2 CDS 2615060 2615257 2615060 ID=cds.MS.gene21691.t1;Parent=MS.gene21691.t1
chr5.2 exon 2613219 2614676 2613219 ID=MS.gene21691.t1.exon2;Parent=MS.gene21691.t1
chr5.2 CDS 2613219 2614676 2613219 ID=cds.MS.gene21691.t1;Parent=MS.gene21691.t1
Gene Sequence

>MS.gene21691

ATGGAAGGTACTATCCAATGCAACGCTAACTACGTTCCTCTCACTCCAATCAGCTTCTTGGAGCGCTCCGCCATTGTTTACAGTAACAAAGTCTCCATCATCTACAACGATGTCACCTACACATGGTCTCAGACTCATCAACGATGTATCAAACTCGCTTCTTCCATTTCTCAACTCGGTGTTTCTCCTCATGATGTGGTTTGTTCCTTTTTCAAACAAATTCAAATTCAACATAGTTTAATTCTTTTTTAAATCTATAATCTAGCGATTTTTCAATTGGATTTGATTTTTTTTCTGTTAATTTTGGTTTTGATCGAAGGCGTGTTCAGTATCCGACATTTGTCTGTCTGGCCTAGACACATGTGAATATGTGATGTATCACACTATGTCATTTTTTCAAATAATTATTGATGTCGACGTGTCCGAGTCTGTGCTTTATAATATCAACTACTTAGAATTTTGCCATGGAACATGTAAATATGATTATAATTTTTTATTTAAGAGGAAATATGATTATAAGTTGGTTTCAAATTTCTTGTTGATGATTTGTGCTTGTTGTAAATTTGCACTTATTTGTGTAGGTCGCTCTGTTGGCTCCTAATATTCCAGCAATGTATGAGTTACATTTTGGTGTTCCAATGTCAGGGGCTGTTCTATGTACCCTGAACACTCGTCATGATTCATCAATGGTTTCGTTGTTGTTAAAGCATTCTGACGCGAAAATCCTTTTTGTAGATCATGAATTACTTGATATTGCTAAGGGAGCACTTGAAATTATGTCAAAATCAACTACCAATCTTCCACTTTTGGTCTTAATTTTGGAGGGTGATGCTCATCCATCAGTCTCTCCCGGAACATTGATCTATGAGAATCTTATATCCGAAGGGAAACTTGATTTTGAGGTGAAAAGACCAAAAGATGAATGGGATCCAATTTCTTTGAATTACACTTCAGGAACAACATCAAGTCCTAAAGGTGTAGTATATAGCCATAGAGGTGCTTATCTTAATTCTTTGGCTACAATTCTTCTCAATGAGATGAAGTCTATGCCGGTGTATTTATGGTGTGTTCCCATGTTTCATTGCAATGGATGGTGTCTTCCTTGGAGTATTGCTGCTCAAGGTGGCACAAATGTTTGCCAAAGAAATGTAACTGCTAAAGGGATATTTGACAATATTTTTAAGCACAAAGTAACACACACGGGGGGTGCACCAACAGTTCTGAACTCATTAATAAATGCACCACCTGATATCAGAAAGCCACTTCCGGGGAAGGTGGTAGTGATGACAGGCGGTGCTCCACCGCCACCGGACGTATTTTTTAGGATGGAAGAACTGGGATTTGATTTAGTTCATTCATATGGTTTGACAGAAACTTATGGTCCTGGATCAATTTGCACATGGAAACCAGAATGGAGTAGCCTGTCTCGAGAGGAGCAGGCGAAAAAGAAGTCACGTCAAGGAGTACAACATATTGGACTGGAAGGACTTGACATAAAAGATCCTGTCACAATGAAGAGTGTACCGGCTGATGCGAAAACCATGGGTGAGGTGATGTTTAGGGGAAACACTGTGATGAATGGATATCTAAAGGATTTAAAAGCAACACAAGAGTCATTTAAAGGTGGATGGTTTAGGACTGGTGACTTGGGAGTAAAGCATTCTGACGGTTACATAGAACTTAAGGATCGGTCGAAGGATATTATCATATCTGGGGGAGAAAACATTAGCACCATTGAGTTGGAAGGTGTTATTTATAGTCATCCAGCAGTTGTTGAGGCAGCTGTTGTTGGGAGACCTGATGAGTATTGGGGAGAGACACCTTGTGCGTTTGTGAAGTTGAAGGAAGGGCACAATGCTACGGAAGAAGAGATAATACAATTCTGTCAAAAGCGTTTGCCTCGTTTTATGGCTCCAAAAACTGTCGTGTTTGCTGATCTGCCAAAGACATCAACCGGCAAGACACAAAAATATGTTTTGAAGGAGAAGGCAAAGGCTATGGGAAGCTTGTCTAAGAAAAAGAATACAAGCCGACTGTAA
Protein sequence

>MS.gene21691.t1

MEGTIQCNANYVPLTPISFLERSAIVYSNKVSIIYNDVTYTWSQTHQRCIKLASSISQLGVSPHDVVALLAPNIPAMYELHFGVPMSGAVLCTLNTRHDSSMVSLLLKHSDAKILFVDHELLDIAKGALEIMSKSTTNLPLLVLILEGDAHPSVSPGTLIYENLISEGKLDFEVKRPKDEWDPISLNYTSGTTSSPKGVVYSHRGAYLNSLATILLNEMKSMPVYLWCVPMFHCNGWCLPWSIAAQGGTNVCQRNVTAKGIFDNIFKHKVTHTGGAPTVLNSLINAPPDIRKPLPGKVVVMTGGAPPPPDVFFRMEELGFDLVHSYGLTETYGPGSICTWKPEWSSLSREEQAKKKSRQGVQHIGLEGLDIKDPVTMKSVPADAKTMGEVMFRGNTVMNGYLKDLKATQESFKGGWFRTGDLGVKHSDGYIELKDRSKDIIISGGENISTIELEGVIYSHPAVVEAAVVGRPDEYWGETPCAFVKLKEGHNATEEEIIQFCQKRLPRFMAPKTVVFADLPKTSTGKTQKYVLKEKAKAMGSLSKKKNTSRL