Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024710.t1 | XP_003610948.1 | 96.5 | 488 | 16 | 1 | 1 | 487 | 1 | 488 | 3.20E-269 | 937.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024710.t1 | F4HUK6 | 60.0 | 493 | 190 | 2 | 1 | 486 | 3 | 495 | 7.3e-182 | 638.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024710.t1 | G7K981 | 96.5 | 488 | 16 | 1 | 1 | 487 | 1 | 488 | 2.3e-269 | 937.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene99857 | MS.gene024710 | PPI |
| MS.gene024710 | MS.gene017279 | PPI |
| MS.gene024710 | MS.gene98148 | PPI |
| MS.gene024710 | MS.gene061578 | PPI |
| MS.gene025344 | MS.gene024710 | PPI |
| MS.gene061175 | MS.gene024710 | PPI |
| MS.gene024710 | MS.gene034275 | PPI |
| MS.gene99100 | MS.gene024710 | PPI |
| MS.gene83513 | MS.gene024710 | PPI |
| MS.gene008350 | MS.gene024710 | PPI |
| MS.gene23788 | MS.gene024710 | PPI |
| MS.gene041843 | MS.gene024710 | PPI |
| MS.gene23786 | MS.gene024710 | PPI |
| MS.gene037817 | MS.gene024710 | PPI |
| MS.gene27218 | MS.gene024710 | PPI |
| MS.gene024710 | MS.gene26216 | PPI |
| MS.gene024710 | MS.gene27213 | PPI |
| MS.gene017552 | MS.gene024710 | PPI |
| MS.gene024710 | MS.gene049681 | PPI |
| MS.gene017547 | MS.gene024710 | PPI |
| MS.gene23782 | MS.gene024710 | PPI |
| MS.gene017545 | MS.gene024710 | PPI |
| MS.gene037815 | MS.gene024710 | PPI |
| MS.gene34290 | MS.gene024710 | PPI |
| MS.gene041844 | MS.gene024710 | PPI |
| MS.gene05028 | MS.gene024710 | PPI |
| MS.gene009614 | MS.gene024710 | PPI |
| MS.gene024710 | MS.gene061174 | PPI |
| MS.gene024710 | MS.gene037813 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024710.t1 | MTR_5g008820 | 96.926 | 488 | 14 | 1 | 1 | 487 | 1 | 488 | 0.0 | 988 |
| MS.gene024710.t1 | MTR_5g008800 | 80.816 | 490 | 91 | 2 | 1 | 487 | 1 | 490 | 0.0 | 837 |
| MS.gene024710.t1 | MTR_8g074040 | 60.606 | 495 | 188 | 3 | 1 | 489 | 43 | 536 | 0.0 | 670 |
| MS.gene024710.t1 | MTR_8g074040 | 60.766 | 418 | 157 | 3 | 78 | 489 | 2 | 418 | 0.0 | 569 |
| MS.gene024710.t1 | MTR_8g074120 | 60.563 | 426 | 163 | 2 | 67 | 487 | 20 | 445 | 0.0 | 566 |
| MS.gene024710.t1 | MTR_2g044180 | 48.163 | 490 | 243 | 3 | 6 | 484 | 12 | 501 | 0.0 | 520 |
| MS.gene024710.t1 | MTR_4g121600 | 48.577 | 492 | 242 | 3 | 6 | 486 | 12 | 503 | 0.0 | 519 |
| MS.gene024710.t1 | MTR_5g076240 | 49.692 | 487 | 235 | 4 | 8 | 486 | 8 | 492 | 5.88e-173 | 499 |
| MS.gene024710.t1 | MTR_3g064420 | 47.189 | 498 | 246 | 5 | 1 | 485 | 1 | 494 | 5.08e-170 | 492 |
| MS.gene024710.t1 | MTR_5g023730 | 47.967 | 492 | 242 | 8 | 5 | 486 | 6 | 493 | 3.35e-160 | 466 |
| MS.gene024710.t1 | MTR_5g076220 | 47.571 | 494 | 248 | 5 | 1 | 485 | 1 | 492 | 6.30e-155 | 452 |
| MS.gene024710.t1 | MTR_5g076200 | 47.166 | 494 | 250 | 5 | 1 | 485 | 1 | 492 | 5.58e-154 | 450 |
| MS.gene024710.t1 | MTR_0161s0050 | 48.185 | 496 | 244 | 4 | 1 | 485 | 1 | 494 | 5.67e-152 | 445 |
| MS.gene024710.t1 | MTR_2g044180 | 48.049 | 410 | 202 | 3 | 86 | 484 | 1 | 410 | 3.30e-150 | 437 |
| MS.gene024710.t1 | MTR_0803s0020 | 29.916 | 478 | 313 | 8 | 14 | 486 | 235 | 695 | 1.78e-54 | 197 |
| MS.gene024710.t1 | MTR_2g095510 | 28.481 | 474 | 285 | 14 | 29 | 481 | 42 | 482 | 8.61e-39 | 148 |
| MS.gene024710.t1 | MTR_2g105570 | 28.092 | 477 | 297 | 16 | 40 | 495 | 54 | 505 | 3.11e-38 | 147 |
| MS.gene024710.t1 | MTR_5g007640 | 28.427 | 496 | 311 | 18 | 9 | 486 | 66 | 535 | 4.34e-38 | 147 |
| MS.gene024710.t1 | MTR_8g039720 | 26.850 | 473 | 294 | 14 | 40 | 486 | 65 | 511 | 1.70e-36 | 142 |
| MS.gene024710.t1 | MTR_1g026310 | 25.934 | 455 | 305 | 11 | 40 | 481 | 68 | 503 | 1.64e-33 | 134 |
| MS.gene024710.t1 | MTR_4g057730 | 26.994 | 489 | 306 | 15 | 14 | 481 | 27 | 485 | 2.82e-33 | 132 |
| MS.gene024710.t1 | MTR_3g460770 | 26.078 | 487 | 311 | 12 | 19 | 486 | 33 | 489 | 2.68e-32 | 130 |
| MS.gene024710.t1 | MTR_4g077900 | 29.590 | 463 | 261 | 17 | 52 | 486 | 1 | 426 | 5.47e-32 | 128 |
| MS.gene024710.t1 | MTR_1569s0010 | 25.304 | 494 | 323 | 11 | 22 | 484 | 3 | 481 | 6.72e-32 | 129 |
| MS.gene024710.t1 | MTR_1g063110 | 26.749 | 486 | 316 | 14 | 14 | 481 | 28 | 491 | 9.20e-32 | 128 |
| MS.gene024710.t1 | MTR_4g005750 | 28.355 | 462 | 291 | 15 | 40 | 486 | 53 | 489 | 1.51e-31 | 127 |
| MS.gene024710.t1 | MTR_3g088880 | 29.201 | 363 | 219 | 10 | 138 | 486 | 166 | 504 | 5.61e-31 | 126 |
| MS.gene024710.t1 | MTR_4g128337 | 26.639 | 488 | 295 | 18 | 27 | 486 | 44 | 496 | 1.11e-29 | 122 |
| MS.gene024710.t1 | MTR_3g035130 | 26.471 | 476 | 295 | 14 | 28 | 483 | 20 | 460 | 6.50e-29 | 119 |
| MS.gene024710.t1 | MTR_4g057730 | 26.371 | 474 | 298 | 15 | 14 | 466 | 27 | 470 | 6.82e-29 | 119 |
| MS.gene024710.t1 | MTR_3g088870 | 28.972 | 321 | 202 | 8 | 179 | 486 | 199 | 506 | 8.11e-29 | 120 |
| MS.gene024710.t1 | MTR_1g063120 | 26.061 | 495 | 312 | 18 | 14 | 481 | 28 | 495 | 2.67e-28 | 118 |
| MS.gene024710.t1 | MTR_2g030240 | 25.956 | 497 | 317 | 13 | 20 | 487 | 8 | 482 | 5.71e-28 | 117 |
| MS.gene024710.t1 | MTR_2g095510 | 27.610 | 431 | 258 | 14 | 29 | 438 | 42 | 439 | 1.16e-27 | 115 |
| MS.gene024710.t1 | MTR_3g035130 | 26.458 | 480 | 296 | 16 | 28 | 486 | 20 | 463 | 7.23e-27 | 114 |
| MS.gene024710.t1 | MTR_1g090737 | 26.638 | 473 | 303 | 17 | 37 | 495 | 80 | 522 | 1.47e-26 | 113 |
| MS.gene024710.t1 | MTR_5g027480 | 27.473 | 455 | 279 | 14 | 52 | 486 | 80 | 503 | 2.32e-26 | 112 |
| MS.gene024710.t1 | MTR_5g027500 | 27.802 | 464 | 278 | 17 | 52 | 486 | 81 | 516 | 1.77e-25 | 110 |
| MS.gene024710.t1 | MTR_1586s0010 | 25.445 | 393 | 269 | 13 | 13 | 391 | 39 | 421 | 3.80e-25 | 107 |
| MS.gene024710.t1 | MTR_1g073180 | 27.373 | 453 | 280 | 12 | 41 | 481 | 84 | 499 | 4.45e-25 | 108 |
| MS.gene024710.t1 | MTR_1g073180 | 27.373 | 453 | 280 | 12 | 41 | 481 | 62 | 477 | 4.53e-25 | 108 |
| MS.gene024710.t1 | MTR_4g057730 | 25.602 | 457 | 289 | 15 | 14 | 449 | 27 | 453 | 7.59e-24 | 104 |
| MS.gene024710.t1 | MTR_2g030240 | 27.607 | 326 | 203 | 8 | 183 | 487 | 75 | 388 | 3.62e-22 | 99.4 |
| MS.gene024710.t1 | MTR_1g086600 | 23.108 | 489 | 299 | 16 | 41 | 467 | 100 | 573 | 1.60e-21 | 98.6 |
| MS.gene024710.t1 | MTR_7g109830 | 22.290 | 489 | 301 | 13 | 41 | 467 | 78 | 549 | 1.47e-20 | 95.5 |
| MS.gene024710.t1 | MTR_4g011790 | 25.150 | 334 | 201 | 9 | 181 | 485 | 227 | 540 | 1.19e-15 | 80.1 |
| MS.gene024710.t1 | MTR_4g011790 | 25.150 | 334 | 201 | 9 | 181 | 485 | 227 | 540 | 1.38e-15 | 79.7 |
| MS.gene024710.t1 | MTR_8g099420 | 21.800 | 500 | 302 | 19 | 41 | 473 | 81 | 558 | 2.32e-15 | 79.3 |
| MS.gene024710.t1 | MTR_5g009360 | 22.244 | 499 | 297 | 16 | 41 | 471 | 80 | 555 | 1.99e-14 | 76.3 |
| MS.gene024710.t1 | MTR_1g026430 | 25.083 | 303 | 208 | 7 | 40 | 330 | 68 | 363 | 2.24e-14 | 75.5 |
| MS.gene024710.t1 | MTR_5g009360 | 24.672 | 381 | 193 | 16 | 169 | 475 | 88 | 448 | 2.31e-14 | 75.9 |
| MS.gene024710.t1 | MTR_5g009350 | 21.374 | 524 | 316 | 17 | 41 | 492 | 80 | 579 | 2.45e-14 | 75.9 |
| MS.gene024710.t1 | MTR_1054s0020 | 38.235 | 102 | 63 | 0 | 385 | 486 | 616 | 717 | 3.00e-14 | 75.9 |
| MS.gene024710.t1 | MTR_5g009350 | 21.643 | 499 | 300 | 16 | 41 | 471 | 80 | 555 | 5.29e-14 | 75.1 |
| MS.gene024710.t1 | MTR_5g009350 | 21.643 | 499 | 300 | 16 | 41 | 471 | 80 | 555 | 6.24e-14 | 74.7 |
| MS.gene024710.t1 | MTR_5g009350 | 21.311 | 488 | 293 | 15 | 41 | 460 | 80 | 544 | 9.30e-14 | 73.9 |
| MS.gene024710.t1 | MTR_1g026470 | 25.083 | 303 | 208 | 7 | 40 | 330 | 68 | 363 | 1.05e-13 | 73.2 |
| MS.gene024710.t1 | MTR_7g084850 | 24.554 | 505 | 291 | 21 | 37 | 486 | 200 | 669 | 2.52e-13 | 72.8 |
| MS.gene024710.t1 | MTR_4g011790 | 36.893 | 103 | 63 | 2 | 385 | 485 | 447 | 549 | 1.18e-12 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024710.t1 | AT1G20560 | 62.677 | 493 | 177 | 2 | 1 | 486 | 3 | 495 | 0.0 | 684 |
| MS.gene024710.t1 | AT2G17650 | 57.256 | 503 | 199 | 3 | 1 | 487 | 48 | 550 | 0.0 | 615 |
| MS.gene024710.t1 | AT1G20560 | 61.928 | 415 | 151 | 2 | 79 | 486 | 3 | 417 | 0.0 | 571 |
| MS.gene024710.t1 | AT1G76290 | 51.230 | 488 | 232 | 4 | 1 | 486 | 1 | 484 | 0.0 | 534 |
| MS.gene024710.t1 | AT3G16910 | 47.976 | 494 | 245 | 3 | 6 | 487 | 14 | 507 | 0.0 | 519 |
| MS.gene024710.t1 | AT5G16370 | 48.692 | 497 | 244 | 3 | 1 | 489 | 1 | 494 | 6.19e-173 | 498 |
| MS.gene024710.t1 | AT5G16340 | 48.283 | 495 | 245 | 3 | 1 | 487 | 1 | 492 | 4.01e-170 | 491 |
| MS.gene024710.t1 | AT1G65880 | 48.049 | 487 | 245 | 3 | 7 | 485 | 7 | 493 | 3.53e-169 | 489 |
| MS.gene024710.t1 | AT1G66120 | 46.761 | 494 | 255 | 4 | 1 | 486 | 1 | 494 | 1.79e-166 | 483 |
| MS.gene024710.t1 | AT1G65890 | 46.964 | 494 | 254 | 3 | 1 | 486 | 1 | 494 | 7.78e-165 | 479 |
| MS.gene024710.t1 | AT1G75960 | 47.677 | 495 | 246 | 4 | 1 | 486 | 1 | 491 | 2.51e-164 | 476 |
| MS.gene024710.t1 | AT1G77240 | 46.951 | 492 | 251 | 4 | 1 | 484 | 1 | 490 | 1.26e-162 | 472 |
| MS.gene024710.t1 | AT1G21530 | 45.621 | 491 | 258 | 5 | 1 | 484 | 1 | 489 | 2.90e-157 | 458 |
| MS.gene024710.t1 | AT1G21530 | 45.621 | 491 | 256 | 6 | 1 | 484 | 1 | 487 | 4.43e-155 | 452 |
| MS.gene024710.t1 | AT1G21540 | 46.667 | 495 | 250 | 7 | 1 | 484 | 1 | 492 | 3.00e-154 | 451 |
| MS.gene024710.t1 | AT1G68270 | 43.788 | 491 | 232 | 7 | 7 | 486 | 7 | 464 | 9.79e-138 | 408 |
| MS.gene024710.t1 | AT4G05160 | 29.615 | 493 | 284 | 16 | 17 | 481 | 30 | 487 | 4.25e-42 | 157 |
| MS.gene024710.t1 | AT1G65060 | 28.629 | 496 | 306 | 16 | 10 | 486 | 46 | 512 | 1.05e-38 | 148 |
| MS.gene024710.t1 | AT1G20500 | 26.174 | 447 | 277 | 9 | 58 | 484 | 83 | 496 | 4.58e-35 | 138 |
| MS.gene024710.t1 | AT1G20510 | 26.139 | 505 | 325 | 14 | 7 | 486 | 11 | 492 | 4.84e-35 | 138 |
| MS.gene024710.t1 | AT3G21240 | 27.926 | 487 | 313 | 15 | 10 | 481 | 34 | 497 | 6.94e-34 | 135 |
| MS.gene024710.t1 | AT5G63380 | 30.745 | 322 | 193 | 10 | 178 | 486 | 202 | 506 | 6.41e-32 | 129 |
| MS.gene024710.t1 | AT1G20510 | 25.567 | 485 | 313 | 14 | 7 | 466 | 11 | 472 | 6.94e-31 | 125 |
| MS.gene024710.t1 | AT3G21240 | 27.273 | 473 | 306 | 15 | 10 | 467 | 34 | 483 | 9.54e-30 | 122 |
| MS.gene024710.t1 | AT3G21240 | 27.273 | 473 | 306 | 15 | 10 | 467 | 34 | 483 | 9.54e-30 | 122 |
| MS.gene024710.t1 | AT1G65060 | 27.902 | 448 | 275 | 16 | 10 | 438 | 46 | 464 | 2.86e-29 | 120 |
| MS.gene024710.t1 | AT1G30520 | 26.172 | 512 | 325 | 11 | 20 | 495 | 13 | 507 | 1.76e-28 | 119 |
| MS.gene024710.t1 | AT1G30520 | 26.172 | 512 | 325 | 11 | 20 | 495 | 13 | 507 | 1.76e-28 | 119 |
| MS.gene024710.t1 | AT4G19010 | 26.932 | 453 | 269 | 15 | 59 | 485 | 93 | 509 | 3.63e-28 | 118 |
| MS.gene024710.t1 | AT3G21230 | 28.175 | 504 | 308 | 19 | 10 | 486 | 40 | 516 | 5.70e-28 | 117 |
| MS.gene024710.t1 | AT3G21230 | 28.571 | 504 | 306 | 20 | 10 | 486 | 40 | 516 | 6.13e-28 | 117 |
| MS.gene024710.t1 | AT3G48990 | 26.250 | 480 | 316 | 12 | 19 | 486 | 9 | 462 | 4.11e-26 | 111 |
| MS.gene024710.t1 | AT1G20480 | 24.835 | 455 | 296 | 11 | 51 | 486 | 86 | 513 | 4.32e-26 | 112 |
| MS.gene024710.t1 | AT1G51680 | 26.154 | 455 | 307 | 11 | 40 | 481 | 66 | 504 | 1.55e-25 | 110 |
| MS.gene024710.t1 | AT1G51680 | 26.154 | 455 | 307 | 11 | 40 | 481 | 66 | 504 | 1.90e-25 | 110 |
| MS.gene024710.t1 | AT1G20510 | 25.383 | 457 | 293 | 14 | 7 | 438 | 11 | 444 | 8.97e-25 | 107 |
| MS.gene024710.t1 | AT1G62940 | 26.180 | 466 | 293 | 15 | 32 | 481 | 53 | 483 | 9.26e-24 | 105 |
| MS.gene024710.t1 | AT3G21230 | 27.629 | 485 | 297 | 19 | 10 | 467 | 40 | 497 | 2.14e-23 | 103 |
| MS.gene024710.t1 | AT1G64400 | 25.510 | 490 | 275 | 21 | 41 | 463 | 81 | 547 | 4.19e-23 | 103 |
| MS.gene024710.t1 | AT2G47240 | 22.379 | 496 | 292 | 16 | 41 | 467 | 19 | 490 | 3.26e-22 | 100 |
| MS.gene024710.t1 | AT2G47240 | 22.379 | 496 | 292 | 16 | 41 | 467 | 78 | 549 | 4.46e-22 | 100 |
| MS.gene024710.t1 | AT2G47240 | 22.379 | 496 | 292 | 16 | 41 | 467 | 78 | 549 | 4.46e-22 | 100 |
| MS.gene024710.t1 | AT2G47240 | 22.379 | 496 | 292 | 16 | 41 | 467 | 78 | 549 | 4.46e-22 | 100 |
| MS.gene024710.t1 | AT5G38120 | 26.087 | 437 | 287 | 12 | 59 | 484 | 85 | 496 | 9.95e-22 | 98.6 |
| MS.gene024710.t1 | AT5G38120 | 26.087 | 437 | 287 | 12 | 59 | 484 | 85 | 496 | 1.30e-21 | 98.6 |
| MS.gene024710.t1 | AT1G51680 | 25.397 | 441 | 300 | 11 | 40 | 467 | 66 | 490 | 3.15e-21 | 97.1 |
| MS.gene024710.t1 | AT1G30520 | 25.000 | 468 | 306 | 11 | 20 | 462 | 13 | 460 | 6.61e-21 | 95.9 |
| MS.gene024710.t1 | AT1G30520 | 25.000 | 468 | 306 | 11 | 20 | 462 | 13 | 460 | 6.61e-21 | 95.9 |
| MS.gene024710.t1 | AT5G38120 | 25.537 | 419 | 276 | 12 | 59 | 466 | 85 | 478 | 9.87e-18 | 86.3 |
| MS.gene024710.t1 | AT5G38120 | 25.537 | 419 | 276 | 12 | 59 | 466 | 85 | 478 | 9.87e-18 | 86.3 |
| MS.gene024710.t1 | AT4G23850 | 24.111 | 506 | 284 | 23 | 40 | 471 | 77 | 556 | 4.53e-17 | 84.7 |
| MS.gene024710.t1 | AT3G16170 | 23.349 | 424 | 240 | 16 | 103 | 481 | 158 | 541 | 3.30e-16 | 82.0 |
| MS.gene024710.t1 | AT1G20490 | 25.266 | 376 | 234 | 11 | 58 | 415 | 83 | 429 | 5.92e-16 | 80.5 |
| MS.gene024710.t1 | AT1G20490 | 25.266 | 376 | 234 | 11 | 58 | 415 | 83 | 429 | 5.92e-16 | 80.5 |
| MS.gene024710.t1 | AT4G11030 | 22.645 | 499 | 278 | 20 | 41 | 463 | 81 | 547 | 1.12e-15 | 80.5 |
| MS.gene024710.t1 | AT5G36880 | 25.253 | 495 | 300 | 20 | 37 | 486 | 145 | 614 | 1.50e-15 | 80.1 |
| MS.gene024710.t1 | AT5G36880 | 25.253 | 495 | 300 | 20 | 37 | 486 | 145 | 614 | 1.50e-15 | 80.1 |
| MS.gene024710.t1 | AT5G36880 | 25.253 | 495 | 300 | 20 | 37 | 486 | 145 | 614 | 1.50e-15 | 80.1 |
| MS.gene024710.t1 | AT5G36880 | 25.253 | 495 | 300 | 20 | 37 | 486 | 145 | 614 | 1.50e-15 | 80.1 |
| MS.gene024710.t1 | AT5G36880 | 25.253 | 495 | 300 | 20 | 37 | 486 | 195 | 664 | 2.95e-15 | 79.0 |
| MS.gene024710.t1 | AT3G05970 | 26.087 | 345 | 188 | 13 | 160 | 453 | 241 | 569 | 1.01e-14 | 77.4 |
| MS.gene024710.t1 | AT5G36880 | 24.580 | 476 | 289 | 20 | 37 | 467 | 145 | 595 | 6.45e-13 | 71.6 |
| MS.gene024710.t1 | AT2G04350 | 24.484 | 339 | 176 | 16 | 185 | 456 | 279 | 604 | 1.16e-11 | 67.8 |
| MS.gene024710.t1 | AT2G04350 | 24.484 | 339 | 176 | 16 | 185 | 456 | 279 | 604 | 1.16e-11 | 67.8 |
Find 107 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCCACATCAGTGTATTTA+TGG | 0.185752 | 5.4:-3660231 | MS.gene024710:CDS |
| AACCACCAAGCTTCCAATTT+TGG | 0.190110 | 5.4:-3660482 | MS.gene024710:CDS |
| TCCAAAATTAAGACCAAAAT+TGG | 0.202204 | 5.4:+3660469 | None:intergenic |
| CCAATTAGGAAGCCACTTTC+CGG | 0.240495 | 5.4:-3660031 | MS.gene024710:CDS |
| CCGGAAAGTGGCTTCCTAAT+TGG | 0.248711 | 5.4:+3660031 | None:intergenic |
| GCAACGGATGTCATCATATC+TGG | 0.261165 | 5.4:-3659587 | MS.gene024710:CDS |
| CCATTGGCGAGGTGATGTTT+AGG | 0.298783 | 5.4:-3659739 | MS.gene024710:CDS |
| AGGTGCCTATCTTAATTCTT+TGG | 0.309813 | 5.4:-3660278 | MS.gene024710:CDS |
| CATTTGAAGGTGGATGGTTT+AGG | 0.319117 | 5.4:-3659664 | MS.gene024710:CDS |
| CTTTATCAGTTACATTTCTT+AGG | 0.319480 | 5.4:+3660134 | None:intergenic |
| ATTTCAATAAGTTACACTTC+TGG | 0.328412 | 5.4:-3660340 | MS.gene024710:CDS |
| GGAGGCAGACTAGCCCATTC+TGG | 0.341215 | 5.4:+3659872 | None:intergenic |
| CATTGGCGAGGTGATGTTTA+GGG | 0.346565 | 5.4:-3659738 | MS.gene024710:CDS |
| TGGAAGACCAGATGAATATT+GGG | 0.347702 | 5.4:-3659489 | MS.gene024710:CDS |
| ATTGTATCACATTCATCCTT+TGG | 0.349053 | 5.4:+3660361 | None:intergenic |
| TGTTAATAAACTCACCAATT+AGG | 0.350899 | 5.4:-3660045 | MS.gene024710:CDS |
| TTGGAAGACCAGATGAATAT+TGG | 0.366717 | 5.4:-3659490 | MS.gene024710:CDS |
| CAATTAGGAAGCCACTTTCC+GGG | 0.388349 | 5.4:-3660030 | MS.gene024710:CDS |
| CAGGATTTCAAGTGCTCCCT+TGG | 0.394701 | 5.4:+3660513 | None:intergenic |
| GGTACACTCTTCATTGTAAC+AGG | 0.403802 | 5.4:+3659776 | None:intergenic |
| AATTAAGATAGGCACCTCTA+TGG | 0.404175 | 5.4:+3660284 | None:intergenic |
| ACTCATCACTACCACCTTCC+CGG | 0.405584 | 5.4:+3660012 | None:intergenic |
| GTCTCTCCCCAATATTCATC+TGG | 0.416068 | 5.4:+3659482 | None:intergenic |
| CAATTTGCTGTTCCAATGTC+AGG | 0.422908 | 5.4:-3660646 | MS.gene024710:CDS |
| GCTTCTTCAATTTCTCAACT+TGG | 0.437322 | 5.4:-3661320 | MS.gene024710:CDS |
| TAAGACCAAAATTGGAAGCT+TGG | 0.443766 | 5.4:+3660477 | None:intergenic |
| CGTCAAGGAGTACAACATAT+TGG | 0.445906 | 5.4:-3659824 | MS.gene024710:CDS |
| ATGAAATCATTGATGAATCT+TGG | 0.453430 | 5.4:+3660596 | None:intergenic |
| ATTAACATGTTCAGAAGTGC+TGG | 0.458189 | 5.4:+3660061 | None:intergenic |
| TATGGTATGACTGAAACTTA+TGG | 0.458394 | 5.4:-3659920 | MS.gene024710:CDS |
| TGTAGCCAAAGAATTAAGAT+AGG | 0.462749 | 5.4:+3660273 | None:intergenic |
| TTTGCACATGGAAGCCAGAA+TGG | 0.463902 | 5.4:-3659886 | MS.gene024710:CDS |
| GAAGGTGGATGGTTTAGGAC+AGG | 0.472943 | 5.4:-3659659 | MS.gene024710:CDS |
| CAACGGATGTCATCATATCT+GGG | 0.479486 | 5.4:-3659586 | MS.gene024710:CDS |
| TTTGATGTAACCCATGCATA+TGG | 0.489151 | 5.4:-3659938 | MS.gene024710:CDS |
| GTAACTTCTATGTAACCATC+AGG | 0.492554 | 5.4:+3659617 | None:intergenic |
| TGGCTAAAGATTACACCCTT+AGG | 0.492741 | 5.4:+3660304 | None:intergenic |
| CAGACGCGCAGGCGAAAATG+AGG | 0.493227 | 5.4:-3659850 | MS.gene024710:CDS |
| AAACATTAGCACAATTCAGT+TGG | 0.497841 | 5.4:-3659558 | MS.gene024710:CDS |
| GACCAAAATTGGAAGCTTGG+TGG | 0.500556 | 5.4:+3660480 | None:intergenic |
| TGGAACCACATCAACTCCTA+AGG | 0.502131 | 5.4:-3660320 | MS.gene024710:CDS |
| TCATAGATCAATGTGTTATG+AGG | 0.509991 | 5.4:+3660427 | None:intergenic |
| AGGGGAAACAATGTGATGAA+TGG | 0.512604 | 5.4:-3659719 | MS.gene024710:CDS |
| TGAATCTTGGTGAGTATTGA+GGG | 0.512848 | 5.4:+3660609 | None:intergenic |
| ACTACCACCTTCCCGGAAAG+TGG | 0.515264 | 5.4:+3660019 | None:intergenic |
| ATGAATCTTGGTGAGTATTG+AGG | 0.525920 | 5.4:+3660608 | None:intergenic |
| CATCCATTGCAATGATACAT+TGG | 0.526775 | 5.4:+3660202 | None:intergenic |
| TTCCATGTGCAAATTGAAGC+AGG | 0.527389 | 5.4:+3659896 | None:intergenic |
| TTTCAGTCATACCATATGCA+TGG | 0.528602 | 5.4:+3659927 | None:intergenic |
| GCAATGGATGGTGTGTCCCT+TGG | 0.532019 | 5.4:-3660189 | MS.gene024710:CDS |
| TGGTGTTTCTCCTAATGATG+TGG | 0.533233 | 5.4:-3661300 | MS.gene024710:intron |
| TTGCACATGGAAGCCAGAAT+GGG | 0.537134 | 5.4:-3659885 | MS.gene024710:CDS |
| AAGATGCATTTGAAGGTGGA+TGG | 0.537805 | 5.4:-3659670 | MS.gene024710:CDS |
| TATGAGAATCTCATAGCTGA+AGG | 0.539229 | 5.4:-3660409 | MS.gene024710:CDS |
| TTCAGTCATACCATATGCAT+GGG | 0.540222 | 5.4:+3659928 | None:intergenic |
| TGGAGTTAGAGGAACATAGT+TGG | 0.543642 | 5.4:+3661451 | None:intergenic |
| GCAACACAAGATGCATTTGA+AGG | 0.544220 | 5.4:-3659677 | MS.gene024710:CDS |
| CAGAGAACAGCTCCTGACAT+TGG | 0.547240 | 5.4:+3660634 | None:intergenic |
| AATTGTAGCTCATATGTGGC+TGG | 0.552082 | 5.4:+3660664 | None:intergenic |
| ATTGGCGAGGTGATGTTTAG+GGG | 0.552478 | 5.4:-3659737 | MS.gene024710:CDS |
| ATGGTTTAGGACAGGTGACA+TGG | 0.552609 | 5.4:-3659651 | MS.gene024710:CDS |
| TCAATTACTTGATGTTGCCA+AGG | 0.554779 | 5.4:-3660530 | MS.gene024710:CDS |
| TAGTCTGCCTCCAGACGCGC+AGG | 0.561404 | 5.4:-3659861 | MS.gene024710:CDS |
| AGCAAATTGTAGCTCATATG+TGG | 0.563337 | 5.4:+3660660 | None:intergenic |
| TACACCCTTAGGAGTTGATG+TGG | 0.571642 | 5.4:+3660315 | None:intergenic |
| GACAAAGTCTCTATCATCTA+CGG | 0.573975 | 5.4:-3661392 | MS.gene024710:CDS |
| CCTAAACATCACCTCGCCAA+TGG | 0.576396 | 5.4:+3659739 | None:intergenic |
| ATCAATGTGTTATGAGGTGA+TGG | 0.579367 | 5.4:+3660433 | None:intergenic |
| CAATTACTTGATGTTGCCAA+GGG | 0.580755 | 5.4:-3660529 | MS.gene024710:CDS |
| ATTAGCACAATTCAGTTGGA+AGG | 0.582149 | 5.4:-3659554 | MS.gene024710:CDS |
| CCTTGGAGTATTGCTGCTCA+AGG | 0.583323 | 5.4:-3660172 | MS.gene024710:CDS |
| TAGGAAGCCACTTTCCGGGA+AGG | 0.583405 | 5.4:-3660026 | MS.gene024710:CDS |
| CAATGTATCATTGCAATGGA+TGG | 0.587801 | 5.4:-3660201 | MS.gene024710:CDS |
| GCGAAAATGAGGGTGCGTCA+AGG | 0.597302 | 5.4:-3659839 | MS.gene024710:CDS |
| TGTGATGAATGGATATCTCA+AGG | 0.600627 | 5.4:-3659708 | MS.gene024710:CDS |
| ACAAGTTGAAAATATATGGA+GGG | 0.603759 | 5.4:-3661491 | None:intergenic |
| ACACCATAAATACACTGATG+TGG | 0.604692 | 5.4:+3660228 | None:intergenic |
| AACGGATGTCATCATATCTG+GGG | 0.608239 | 5.4:-3659585 | MS.gene024710:CDS |
| GGAACCACATCAACTCCTAA+GGG | 0.608503 | 5.4:-3660319 | MS.gene024710:CDS |
| GTTCCAATGTATCATTGCAA+TGG | 0.609007 | 5.4:-3660205 | MS.gene024710:CDS |
| GAAGCCACTTTCCGGGAAGG+TGG | 0.610235 | 5.4:-3660023 | MS.gene024710:CDS |
| TGTTACAATGAAGAGTGTAC+CGG | 0.610654 | 5.4:-3659774 | MS.gene024710:CDS |
| AGGAGTACAACATATTGGAA+TGG | 0.610916 | 5.4:-3659819 | MS.gene024710:CDS |
| TTCAGTTTCACAAATGCACA+AGG | 0.613163 | 5.4:+3659458 | None:intergenic |
| GACTTTGTCGCTGTAAACAA+TGG | 0.613223 | 5.4:+3661406 | None:intergenic |
| ATGAGAATCTCATAGCTGAA+GGG | 0.616249 | 5.4:-3660408 | MS.gene024710:CDS |
| AGACGCGCAGGCGAAAATGA+GGG | 0.616393 | 5.4:-3659849 | MS.gene024710:CDS |
| TAAGCACAATGTAACTCACA+TGG | 0.621921 | 5.4:-3660092 | MS.gene024710:CDS |
| AGAAGTTACTGATCGCGCAA+CGG | 0.624290 | 5.4:-3659603 | MS.gene024710:CDS |
| TGGAGTATTGCTGCTCAAGG+TGG | 0.625763 | 5.4:-3660169 | MS.gene024710:CDS |
| GGGAAGGTGGTAGTGATGAG+TGG | 0.630192 | 5.4:-3660010 | MS.gene024710:CDS |
| CCTTGAGCAGCAATACTCCA+AGG | 0.631338 | 5.4:+3660172 | None:intergenic |
| GTCCTGCTTCAATTTGCACA+TGG | 0.633701 | 5.4:-3659898 | MS.gene024710:CDS |
| TGGTTTAGGACAGGTGACAT+GGG | 0.643048 | 5.4:-3659650 | MS.gene024710:CDS |
| GGTGTAATCTTTAGCCATAG+AGG | 0.646758 | 5.4:-3660298 | MS.gene024710:CDS |
| GGAAGACCAGATGAATATTG+GGG | 0.647828 | 5.4:-3659488 | MS.gene024710:CDS |
| ATGGGAGTAAAGCATCCTGA+TGG | 0.648448 | 5.4:-3659632 | MS.gene024710:CDS |
| GCATTTGTGAAACTGAAGGA+AGG | 0.653226 | 5.4:-3659452 | MS.gene024710:CDS |
| ACACAAGATGCATTTGAAGG+TGG | 0.655564 | 5.4:-3659674 | MS.gene024710:CDS |
| TTGTGCATTTGTGAAACTGA+AGG | 0.665096 | 5.4:-3659456 | MS.gene024710:CDS |
| CTTGAGCAGCAATACTCCAA+GGG | 0.678894 | 5.4:+3660173 | None:intergenic |
| ACGGATGTCATCATATCTGG+GGG | 0.679713 | 5.4:-3659584 | MS.gene024710:CDS |
| CATTTGTGAAACTGAAGGAA+GGG | 0.680166 | 5.4:-3659451 | MS.gene024710:intron |
| AAGGTGGTAGTGATGAGTGG+TGG | 0.681074 | 5.4:-3660007 | MS.gene024710:CDS |
| CACAATGTAACTCACATGGG+AGG | 0.687273 | 5.4:-3660088 | MS.gene024710:CDS |
| AAGCACAATGTAACTCACAT+GGG | 0.688323 | 5.4:-3660091 | MS.gene024710:CDS |
| ACGGTGATGTGACTTACACA+TGG | 0.710593 | 5.4:-3661373 | MS.gene024710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAAATATTTAAGAAAA+TGG | + | chr5.4:3659370-3659389 | None:intergenic | 10.0% |
| !!! | ATCTTTATTGTTTTTTTTAA+AGG | + | chr5.4:3659607-3659626 | None:intergenic | 10.0% |
| !!! | TTTTTTTTAATGAAATACAA+TGG | - | chr5.4:3659671-3659690 | MS.gene024710:CDS | 10.0% |
| !!! | CAAAAAATTTAAAACTTCAA+TGG | - | chr5.4:3659642-3659661 | MS.gene024710:CDS | 15.0% |
| !!! | CATTGAAGTTTTAAATTTTT+TGG | + | chr5.4:3659644-3659663 | None:intergenic | 15.0% |
| !!! | GGAATAATTTTGTTAATAAA+TGG | - | chr5.4:3659692-3659711 | MS.gene024710:CDS | 15.0% |
| !! | AAAGAATTTCACTAAACTAA+TGG | - | chr5.4:3659728-3659747 | MS.gene024710:CDS | 20.0% |
| !! | AACCTTGATAAATAAAAACA+TGG | + | chr5.4:3659430-3659449 | None:intergenic | 20.0% |
| !! | AATTGATAGATTAGATGAAT+TGG | + | chr5.4:3659774-3659793 | None:intergenic | 20.0% |
| !! | TTATGTGATTTCATGTTAAT+AGG | - | chr5.4:3661446-3661465 | MS.gene024710:CDS | 20.0% |
| !!! | ATGATCAACAAAAAGAATTT+TGG | + | chr5.4:3660081-3660100 | None:intergenic | 20.0% |
| !!! | GAAGTTTTAAATTTTTTGGA+TGG | + | chr5.4:3659640-3659659 | None:intergenic | 20.0% |
| ! | AAAAAACAAACCACATCATT+AGG | + | chr5.4:3659343-3659362 | None:intergenic | 25.0% |
| ! | ATGAAATCATTGATGAATCT+TGG | + | chr5.4:3660037-3660056 | None:intergenic | 25.0% |
| ! | ATTAGATGAATTGGAATTGA+TGG | + | chr5.4:3659765-3659784 | None:intergenic | 25.0% |
| ! | ATTTAATACATAGCTACATG+TGG | + | chr5.4:3659800-3659819 | None:intergenic | 25.0% |
| ! | ATTTCAATAAGTTACACTTC+TGG | - | chr5.4:3660290-3660309 | MS.gene024710:CDS | 25.0% |
| ! | CTTTATCAGTTACATTTCTT+AGG | + | chr5.4:3660499-3660518 | None:intergenic | 25.0% |
| ! | TCCAAAATTAAGACCAAAAT+TGG | + | chr5.4:3660164-3660183 | None:intergenic | 25.0% |
| ! | TGTTAATAAACTCACCAATT+AGG | - | chr5.4:3660585-3660604 | MS.gene024710:CDS | 25.0% |
| ! | TTTGCACTAGAAAAAATATC+TGG | + | chr5.4:3660662-3660681 | None:intergenic | 25.0% |
| !!! | CAATAAACTTGCTAATAGAT+TGG | - | chr5.4:3659552-3659571 | MS.gene024710:CDS | 25.0% |
| !!! | CTCCATGTTTTTATTTATCA+AGG | - | chr5.4:3659425-3659444 | MS.gene024710:intron | 25.0% |
| !!! | TCCAATTTTGGTCTTAATTT+TGG | - | chr5.4:3660160-3660179 | MS.gene024710:CDS | 25.0% |
| AAACATTAGCACAATTCAGT+TGG | - | chr5.4:3661072-3661091 | MS.gene024710:intron | 30.0% | |
| AATCCACATCAGTGTATTTA+TGG | - | chr5.4:3660399-3660418 | MS.gene024710:CDS | 30.0% | |
| ACAAACACAAATCATCAACA+AGG | + | chr5.4:3659897-3659916 | None:intergenic | 30.0% | |
| ATTGTATCACATTCATCCTT+TGG | + | chr5.4:3660272-3660291 | None:intergenic | 30.0% | |
| GAAACATTTGCCTAGATTTA+TGG | - | chr5.4:3661240-3661259 | MS.gene024710:intron | 30.0% | |
| TATGGTATGACTGAAACTTA+TGG | - | chr5.4:3660710-3660729 | MS.gene024710:intron | 30.0% | |
| TCATAGATCAATGTGTTATG+AGG | + | chr5.4:3660206-3660225 | None:intergenic | 30.0% | |
| TCCTAGAAATGCATTACAAT+CGG | + | chr5.4:3661383-3661402 | None:intergenic | 30.0% | |
| TGTAGCCAAAGAATTAAGAT+AGG | + | chr5.4:3660360-3660379 | None:intergenic | 30.0% | |
| TTAGCAAGTTTATTGCATGA+TGG | + | chr5.4:3659547-3659566 | None:intergenic | 30.0% | |
| !! | TTTTCTAGTGCAAAAGAACT+AGG | - | chr5.4:3660668-3660687 | MS.gene024710:CDS | 30.0% |
| AAAAAGCTGATTGGAGTTAG+AGG | + | chr5.4:3659193-3659212 | None:intergenic | 35.0% | |
| AAGCACAATGTAACTCACAT+GGG | - | chr5.4:3660539-3660558 | MS.gene024710:CDS | 35.0% | |
| AATTAAGATAGGCACCTCTA+TGG | + | chr5.4:3660349-3660368 | None:intergenic | 35.0% | |
| ACACCATAAATACACTGATG+TGG | + | chr5.4:3660405-3660424 | None:intergenic | 35.0% | |
| AGCAAATTGTAGCTCATATG+TGG | + | chr5.4:3659973-3659992 | None:intergenic | 35.0% | |
| AGGTGCCTATCTTAATTCTT+TGG | - | chr5.4:3660352-3660371 | MS.gene024710:CDS | 35.0% | |
| ATCAATGTGTTATGAGGTGA+TGG | + | chr5.4:3660200-3660219 | None:intergenic | 35.0% | |
| ATGAGAATCTCATAGCTGAA+GGG | - | chr5.4:3660222-3660241 | MS.gene024710:CDS | 35.0% | |
| ATTAGCACAATTCAGTTGGA+AGG | - | chr5.4:3661076-3661095 | MS.gene024710:intron | 35.0% | |
| CAATGTATCATTGCAATGGA+TGG | - | chr5.4:3660429-3660448 | MS.gene024710:CDS | 35.0% | |
| CAATTACTTGATGTTGCCAA+GGG | - | chr5.4:3660101-3660120 | MS.gene024710:CDS | 35.0% | |
| CATCCATTGCAATGATACAT+TGG | + | chr5.4:3660431-3660450 | None:intergenic | 35.0% | |
| CATTTGTGAAACTGAAGGAA+GGG | - | chr5.4:3661179-3661198 | MS.gene024710:intron | 35.0% | |
| CTAGAAAAAATATCTGGTGG+CGG | + | chr5.4:3660656-3660675 | None:intergenic | 35.0% | |
| GACAAAGTCTCTATCATCTA+CGG | - | chr5.4:3659238-3659257 | MS.gene024710:intron | 35.0% | |
| GCACTAGAAAAAATATCTGG+TGG | + | chr5.4:3660659-3660678 | None:intergenic | 35.0% | |
| GCTTCTTCAATTTCTCAACT+TGG | - | chr5.4:3659310-3659329 | MS.gene024710:intron | 35.0% | |
| GTAACTTCTATGTAACCATC+AGG | + | chr5.4:3661016-3661035 | None:intergenic | 35.0% | |
| GTTCCAATGTATCATTGCAA+TGG | - | chr5.4:3660425-3660444 | MS.gene024710:CDS | 35.0% | |
| TAAGACCAAAATTGGAAGCT+TGG | + | chr5.4:3660156-3660175 | None:intergenic | 35.0% | |
| TAAGCACAATGTAACTCACA+TGG | - | chr5.4:3660538-3660557 | MS.gene024710:CDS | 35.0% | |
| TATGAGAATCTCATAGCTGA+AGG | - | chr5.4:3660221-3660240 | MS.gene024710:CDS | 35.0% | |
| TCAATTACTTGATGTTGCCA+AGG | - | chr5.4:3660100-3660119 | MS.gene024710:CDS | 35.0% | |
| TGGAAGACCAGATGAATATT+GGG | - | chr5.4:3661141-3661160 | MS.gene024710:intron | 35.0% | |
| TGTGATGAATGGATATCTCA+AGG | - | chr5.4:3660922-3660941 | MS.gene024710:intron | 35.0% | |
| TTCAGTCATACCATATGCAT+GGG | + | chr5.4:3660705-3660724 | None:intergenic | 35.0% | |
| TTCAGTTTCACAAATGCACA+AGG | + | chr5.4:3661175-3661194 | None:intergenic | 35.0% | |
| TTGGAAGACCAGATGAATAT+TGG | - | chr5.4:3661140-3661159 | MS.gene024710:intron | 35.0% | |
| TTGTGCATTTGTGAAACTGA+AGG | - | chr5.4:3661174-3661193 | MS.gene024710:intron | 35.0% | |
| TTTCAGTCATACCATATGCA+TGG | + | chr5.4:3660706-3660725 | None:intergenic | 35.0% | |
| TTTGATGTAACCCATGCATA+TGG | - | chr5.4:3660692-3660711 | MS.gene024710:intron | 35.0% | |
| ! | AGGAGTACAACATATTGGAA+TGG | - | chr5.4:3660811-3660830 | MS.gene024710:intron | 35.0% |
| ! | ATGAATCTTGGTGAGTATTG+AGG | + | chr5.4:3660025-3660044 | None:intergenic | 35.0% |
| ! | ATTAACATGTTCAGAAGTGC+TGG | + | chr5.4:3660572-3660591 | None:intergenic | 35.0% |
| ! | TCTAACTCCAATCAGCTTTT+TGG | - | chr5.4:3659192-3659211 | MS.gene024710:intron | 35.0% |
| ! | TGAAGGGAAACTTGATTTTG+AGG | - | chr5.4:3660238-3660257 | MS.gene024710:CDS | 35.0% |
| ! | TGTTACAATGAAGAGTGTAC+CGG | - | chr5.4:3660856-3660875 | MS.gene024710:intron | 35.0% |
| !! | CACAGAAATATGTTCTGAGA+AGG | - | chr5.4:3661314-3661333 | MS.gene024710:CDS | 35.0% |
| !! | GAAATATGTTCTGAGAAGGA+AGG | - | chr5.4:3661318-3661337 | MS.gene024710:CDS | 35.0% |
| !! | TGAATCTTGGTGAGTATTGA+GGG | + | chr5.4:3660024-3660043 | None:intergenic | 35.0% |
| !!! | GAATTTGCACTTGTTTTGTC+AGG | - | chr5.4:3659920-3659939 | MS.gene024710:CDS | 35.0% |
| AACGGATGTCATCATATCTG+GGG | - | chr5.4:3661045-3661064 | MS.gene024710:intron | 40.0% | |
| AAGATGCATTTGAAGGTGGA+TGG | - | chr5.4:3660960-3660979 | MS.gene024710:intron | 40.0% | |
| AATTGTAGCTCATATGTGGC+TGG | + | chr5.4:3659969-3659988 | None:intergenic | 40.0% | |
| ACACAAGATGCATTTGAAGG+TGG | - | chr5.4:3660956-3660975 | MS.gene024710:intron | 40.0% | |
| AGGGGAAACAATGTGATGAA+TGG | - | chr5.4:3660911-3660930 | MS.gene024710:intron | 40.0% | |
| AGTATGTGATGTAGCTGCAT+GGG | - | chr5.4:3659464-3659483 | MS.gene024710:CDS | 40.0% | |
| CAACGGATGTCATCATATCT+GGG | - | chr5.4:3661044-3661063 | MS.gene024710:intron | 40.0% | |
| CATTTGAAGGTGGATGGTTT+AGG | - | chr5.4:3660966-3660985 | MS.gene024710:intron | 40.0% | |
| GACTTTGTCGCTGTAAACAA+TGG | + | chr5.4:3659227-3659246 | None:intergenic | 40.0% | |
| GATCTACCAAAGACATCAAC+TGG | - | chr5.4:3661286-3661305 | MS.gene024710:intron | 40.0% | |
| GCAACACAAGATGCATTTGA+AGG | - | chr5.4:3660953-3660972 | MS.gene024710:intron | 40.0% | |
| GCATTTGTGAAACTGAAGGA+AGG | - | chr5.4:3661178-3661197 | MS.gene024710:intron | 40.0% | |
| GCCGATTGTAATGCATTTCT+AGG | - | chr5.4:3661379-3661398 | MS.gene024710:CDS | 40.0% | |
| GGAAGACCAGATGAATATTG+GGG | - | chr5.4:3661142-3661161 | MS.gene024710:intron | 40.0% | |
| GGTACACTCTTCATTGTAAC+AGG | + | chr5.4:3660857-3660876 | None:intergenic | 40.0% | |
| GGTGTAATCTTTAGCCATAG+AGG | - | chr5.4:3660332-3660351 | MS.gene024710:CDS | 40.0% | |
| GTTTGAGGAGCCATAAATCT+AGG | + | chr5.4:3661253-3661272 | None:intergenic | 40.0% | |
| TATCCTAGTGCTCTCTCTAT+TGG | - | chr5.4:3659822-3659841 | MS.gene024710:CDS | 40.0% | |
| TCACCAAACACAACAGTTTG+AGG | + | chr5.4:3661268-3661287 | None:intergenic | 40.0% | |
| TGGAGTTAGAGGAACATAGT+TGG | + | chr5.4:3659182-3659201 | None:intergenic | 40.0% | |
| TGGCTAAAGATTACACCCTT+AGG | + | chr5.4:3660329-3660348 | None:intergenic | 40.0% | |
| TGGTGTTTCTCCTAATGATG+TGG | - | chr5.4:3659330-3659349 | MS.gene024710:intron | 40.0% | |
| TTCCATGTGCAAATTGAAGC+AGG | + | chr5.4:3660737-3660756 | None:intergenic | 40.0% | |
| ! | AACCACCAAGCTTCCAATTT+TGG | - | chr5.4:3660148-3660167 | MS.gene024710:CDS | 40.0% |
| ! | CGTCAAGGAGTACAACATAT+TGG | - | chr5.4:3660806-3660825 | MS.gene024710:intron | 40.0% |
| ! | GTCTTTCCAGTTGATGTCTT+TGG | + | chr5.4:3661295-3661314 | None:intergenic | 40.0% |
| ! | TAGTCATCCAGCAGTTTTTG+AGG | - | chr5.4:3661108-3661127 | MS.gene024710:intron | 40.0% |
| !! | AATCCAATAGAGAGAGCACT+AGG | + | chr5.4:3659828-3659847 | None:intergenic | 40.0% |
| !! | CAATTTGCTGTTCCAATGTC+AGG | - | chr5.4:3659984-3660003 | MS.gene024710:CDS | 40.0% |
| !!! | GGAAACTTGATTTTGAGGTG+AGG | - | chr5.4:3660243-3660262 | MS.gene024710:CDS | 40.0% |
| ACGGATGTCATCATATCTGG+GGG | - | chr5.4:3661046-3661065 | MS.gene024710:intron | 45.0% | |
| ACGGTGATGTGACTTACACA+TGG | - | chr5.4:3659257-3659276 | MS.gene024710:intron | 45.0% | |
| AGAAGTTACTGATCGCGCAA+CGG | - | chr5.4:3661027-3661046 | MS.gene024710:intron | 45.0% | |
| AGGGTACAATGCTACAGAAG+AGG | - | chr5.4:3661198-3661217 | MS.gene024710:intron | 45.0% | |
| ATTGGCGAGGTGATGTTTAG+GGG | - | chr5.4:3660893-3660912 | MS.gene024710:intron | 45.0% | |
| CACAATGTAACTCACATGGG+AGG | - | chr5.4:3660542-3660561 | MS.gene024710:CDS | 45.0% | |
| CATTGGCGAGGTGATGTTTA+GGG | - | chr5.4:3660892-3660911 | MS.gene024710:intron | 45.0% | |
| CTTGAGCAGCAATACTCCAA+GGG | + | chr5.4:3660460-3660479 | None:intergenic | 45.0% | |
| GAACGCTCCAAAAAGCTGAT+TGG | + | chr5.4:3659202-3659221 | None:intergenic | 45.0% | |
| GACCAAAATTGGAAGCTTGG+TGG | + | chr5.4:3660153-3660172 | None:intergenic | 45.0% | |
| GAGTATGTGATGTAGCTGCA+TGG | - | chr5.4:3659463-3659482 | MS.gene024710:CDS | 45.0% | |
| GCAACGGATGTCATCATATC+TGG | - | chr5.4:3661043-3661062 | MS.gene024710:intron | 45.0% | |
| GCTCCTCAAACTGTTGTGTT+TGG | - | chr5.4:3661262-3661281 | MS.gene024710:intron | 45.0% | |
| GGAACCACATCAACTCCTAA+GGG | - | chr5.4:3660311-3660330 | MS.gene024710:CDS | 45.0% | |
| GTCCTGCTTCAATTTGCACA+TGG | - | chr5.4:3660732-3660751 | MS.gene024710:intron | 45.0% | |
| GTCTCTCCCCAATATTCATC+TGG | + | chr5.4:3661151-3661170 | None:intergenic | 45.0% | |
| TGATGCAAAAACCATTGGCG+AGG | - | chr5.4:3660880-3660899 | MS.gene024710:intron | 45.0% | |
| TGGAACCACATCAACTCCTA+AGG | - | chr5.4:3660310-3660329 | MS.gene024710:CDS | 45.0% | |
| TTGCACATGGAAGCCAGAAT+GGG | - | chr5.4:3660745-3660764 | MS.gene024710:intron | 45.0% | |
| TTTGCACATGGAAGCCAGAA+TGG | - | chr5.4:3660744-3660763 | MS.gene024710:intron | 45.0% | |
| ! | ATGGGAGTAAAGCATCCTGA+TGG | - | chr5.4:3660998-3661017 | MS.gene024710:intron | 45.0% |
| ! | ATGGTTTAGGACAGGTGACA+TGG | - | chr5.4:3660979-3660998 | MS.gene024710:intron | 45.0% |
| ! | CAATTAGGAAGCCACTTTCC+GGG | - | chr5.4:3660600-3660619 | MS.gene024710:CDS | 45.0% |
| ! | CCAATGGTTTTTGCATCAGC+CGG | + | chr5.4:3660878-3660897 | None:intergenic | 45.0% |
| ! | CCAATTAGGAAGCCACTTTC+CGG | - | chr5.4:3660599-3660618 | MS.gene024710:CDS | 45.0% |
| ! | TGGTTTAGGACAGGTGACAT+GGG | - | chr5.4:3660980-3660999 | MS.gene024710:intron | 45.0% |
| !! | GAAAAAATATCTGGTGGCGG+TGG | + | chr5.4:3660653-3660672 | None:intergenic | 45.0% |
| !! | GCTTGGTGGTTGATTTTGAC+AGG | + | chr5.4:3660139-3660158 | None:intergenic | 45.0% |
| !! | TACACCCTTAGGAGTTGATG+TGG | + | chr5.4:3660318-3660337 | None:intergenic | 45.0% |
| !!! | TTTTGAGGTGAGGAGACCAA+AGG | - | chr5.4:3660253-3660272 | MS.gene024710:CDS | 45.0% |
| !! | AAATCATTATAATTATAATT+TGG | - | chr5.4:3659862-3659881 | MS.gene024710:CDS | 5.0% |
| ACAGCAGCCTCAAAAACTGC+TGG | + | chr5.4:3661118-3661137 | None:intergenic | 50.0% | |
| ACTCATCACTACCACCTTCC+CGG | + | chr5.4:3660621-3660640 | None:intergenic | 50.0% | |
| AGAAGGAAGGCGAAGGCTAT+GGG | - | chr5.4:3661331-3661350 | MS.gene024710:CDS | 50.0% | |
| CAGAGAACAGCTCCTGACAT+TGG | + | chr5.4:3659999-3660018 | None:intergenic | 50.0% | |
| CCATTGGCGAGGTGATGTTT+AGG | - | chr5.4:3660891-3660910 | MS.gene024710:intron | 50.0% | |
| CCGGAAAGTGGCTTCCTAAT+TGG | + | chr5.4:3660602-3660621 | None:intergenic | 50.0% | |
| CCGGCTGATGCAAAAACCAT+TGG | - | chr5.4:3660875-3660894 | MS.gene024710:intron | 50.0% | |
| CCTAAACATCACCTCGCCAA+TGG | + | chr5.4:3660894-3660913 | None:intergenic | 50.0% | |
| CCTTGAGCAGCAATACTCCA+AGG | + | chr5.4:3660461-3660480 | None:intergenic | 50.0% | |
| ! | AAGGTGGTAGTGATGAGTGG+TGG | - | chr5.4:3660623-3660642 | MS.gene024710:CDS | 50.0% |
| ! | CAGGATTTCAAGTGCTCCCT+TGG | + | chr5.4:3660120-3660139 | None:intergenic | 50.0% |
| ! | GAAGGTGGATGGTTTAGGAC+AGG | - | chr5.4:3660971-3660990 | MS.gene024710:intron | 50.0% |
| !! | CCTTGGAGTATTGCTGCTCA+AGG | - | chr5.4:3660458-3660477 | MS.gene024710:CDS | 50.0% |
| !! | TGGAGTATTGCTGCTCAAGG+TGG | - | chr5.4:3660461-3660480 | MS.gene024710:CDS | 50.0% |
| !! | TGTTCTGAGAAGGAAGGCGA+AGG | - | chr5.4:3661324-3661343 | MS.gene024710:CDS | 50.0% |
| !!! | AGCAGTTTTTGAGGCTGCTG+TGG | - | chr5.4:3661117-3661136 | MS.gene024710:intron | 50.0% |
| !!! | GTTTTTGAGGCTGCTGTGGT+TGG | - | chr5.4:3661121-3661140 | MS.gene024710:intron | 50.0% |
| ACTACCACCTTCCCGGAAAG+TGG | + | chr5.4:3660614-3660633 | None:intergenic | 55.0% | |
| AGACGCGCAGGCGAAAATGA+GGG | - | chr5.4:3660781-3660800 | MS.gene024710:intron | 55.0% | |
| GAGAAGGAAGGCGAAGGCTA+TGG | - | chr5.4:3661330-3661349 | MS.gene024710:CDS | 55.0% | |
| GCAATGGATGGTGTGTCCCT+TGG | - | chr5.4:3660441-3660460 | MS.gene024710:CDS | 55.0% | |
| ! | GCGAAAATGAGGGTGCGTCA+AGG | - | chr5.4:3660791-3660810 | MS.gene024710:intron | 55.0% |
| ! | GGGAAGGTGGTAGTGATGAG+TGG | - | chr5.4:3660620-3660639 | MS.gene024710:CDS | 55.0% |
| ! | TAGGAAGCCACTTTCCGGGA+AGG | - | chr5.4:3660604-3660623 | MS.gene024710:CDS | 55.0% |
| CAGACGCGCAGGCGAAAATG+AGG | - | chr5.4:3660780-3660799 | MS.gene024710:intron | 60.0% | |
| ! | ATTTTCGCCTGCGCGTCTGG+AGG | + | chr5.4:3660779-3660798 | None:intergenic | 60.0% |
| ! | CTCATTTTCGCCTGCGCGTC+TGG | + | chr5.4:3660782-3660801 | None:intergenic | 60.0% |
| ! | GAAGCCACTTTCCGGGAAGG+TGG | - | chr5.4:3660607-3660626 | MS.gene024710:CDS | 60.0% |
| ! | GGAGGCAGACTAGCCCATTC+TGG | + | chr5.4:3660761-3660780 | None:intergenic | 60.0% |
| TAGTCTGCCTCCAGACGCGC+AGG | - | chr5.4:3660769-3660788 | MS.gene024710:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 3659154 | 3661498 | 3659154 | ID=MS.gene024710 |
| chr5.4 | mRNA | 3659154 | 3661498 | 3659154 | ID=MS.gene024710.t1;Parent=MS.gene024710 |
| chr5.4 | exon | 3661301 | 3661498 | 3661301 | ID=MS.gene024710.t1.exon1;Parent=MS.gene024710.t1 |
| chr5.4 | CDS | 3661301 | 3661498 | 3661301 | ID=cds.MS.gene024710.t1;Parent=MS.gene024710.t1 |
| chr5.4 | exon | 3659452 | 3660710 | 3659452 | ID=MS.gene024710.t1.exon2;Parent=MS.gene024710.t1 |
| chr5.4 | CDS | 3659452 | 3660710 | 3659452 | ID=cds.MS.gene024710.t1;Parent=MS.gene024710.t1 |
| chr5.4 | exon | 3659154 | 3659184 | 3659154 | ID=MS.gene024710.t1.exon3;Parent=MS.gene024710.t1 |
| chr5.4 | CDS | 3659154 | 3659184 | 3659154 | ID=cds.MS.gene024710.t1;Parent=MS.gene024710.t1 |
| Gene Sequence |
| Protein sequence |
